F305612

General Info

Members Datasets Scaffolds Average Seq Length
199 146 191 385

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10020161|Ga0070717_100201619
Length 456
Sequence VRDVGFVPNQHVDKCADYAMPALCHTVVLEGTIPLWRMLGTHHVDLRRPPGSRLSLRTPTHLLMSTDTQLGSRTPPARAKPRPPRLLYVVTEDWFFLSHRLPMARAARAAGFEVHVATNVADGAAAIAREGFILHPIRFARGRLSPFATLATVRALRRLHRALAPDLVHHVALQATVLGSFAALGAPAARINAITGLGHAFISQTRKARLMRSLIGGLLRRLIDRPRSVALVQNPDDRQLLLGLGIAPDRIVLIPGSGVDVALLKPLPEPAGAVTLGFVGRLLDDKGIRVLVAAHRLLRARASPAMLLIAGTPDPANPASVSRAEAEGWSREPGITWLGHVEDIATVWARAHIAVLPSRREGLPKSLLEAAACARPMIATDVPGCREIAIENETALLVPADDAAALADAIERLAQAPDLRARFGAAARRLAEKRFSADAIGHSVTELYLQLVRTPG

Samples

Sample ID Description Type Environment
1 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
2 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
3 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
4 2824753945 Bradyrhizobium sp. HAMBI 2128 Isolate Unclassified
5 2824763712 Bradyrhizobium sp. HAMBI 2129 Isolate Unclassified
6 2904711408 Bradyrhizobium sp. USDA 3456 Isolate Unclassified
7 2935810662 Bradyrhizobium sp. RT3a Isolate Nodule
8 2936037263 Bradyrhizobium sp. JR18.2 Isolate Nodule
9 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
38 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
49 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
50 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
51 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
57 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
58 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
59 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
60 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
61 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
62 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
63 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
64 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
65 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
66 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
67 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
68 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
69 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
70 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
71 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
72 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
78 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
82 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
83 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
84 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
85 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
86 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
87 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
88 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
89 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
90 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
91 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
92 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
93 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
94 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
95 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
96 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
97 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
98 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
99 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
100 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
101 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
102 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
103 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
104 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
105 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
106 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
107 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
108 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
109 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
110 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
111 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
112 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
113 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
116 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
120 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
121 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
122 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
133 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
134 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
135 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
136 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
137 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
138 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
139 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
140 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
141 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
142 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
143 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
144 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
145 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
146 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.98
Metatranscriptomes 0
Isolates 4.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.05
Nodule 1.51
Rhizoplane 4.52
Rhizosphere 80.9
Stem 0
Stem Tuber 0
Unclassified 4.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10000168 3300003215 Bacteria 65461
2 rootH2_10064588 3300003320 Bacteria 1601
3 Ga0070689_100105937 3300005340 Bacteria 2230
4 Ga0070668_100200978 3300005347 Bacteria 1636
5 Ga0070675_100057542 3300005354 Bacteria 3206
6 Ga0070674_100060630 3300005356 Bacteria 2638
7 Ga0070678_100139188 3300005456 Bacteria 1940
8 Ga0070681_10106160 3300005458 Bacteria 2750
9 Ga0081455_10000659 3300005937 Bacteria 44728
10 Ga0070717_10020161 3300006028 Bacteria 5240
11 Ga0070717_10183482 3300006028 Bacteria 1825
12 Ga0075365_10037207 3300006038 Bacteria 3158
13 Ga0075368_10075649 3300006042 Bacteria 1365
14 Ga0075364_10146797 3300006051 Bacteria 1588
15 Ga0075367_10134493 3300006178 Bacteria 1529
16 Ga0075369_10078222 3300006186 Bacteria 1464
17 Ga0075366_10005551 3300006195 Bacteria 6837
18 Ga0068871_100009725 3300006358 Bacteria 6980
19 Ga0075429_100146928 3300006880 Bacteria 2064
20 Ga0075436_100108106 3300006914 Bacteria 1940
21 Ga0075436_100147130 3300006914 Bacteria 1657
22 Ga0075435_100041785 3300007076 Bacteria 3666
23 Ga0075435_100100324 3300007076 Bacteria 2398
24 Ga0075435_100244642 3300007076 Bacteria 1526
25 Ga0105240_10000832 3300009093 Bacteria 55624
26 Ga0105240_10001571 3300009093 Bacteria 38713
27 Ga0111539_10018475 3300009094 Bacteria 8635
28 Ga0111539_10305027 3300009094 Bacteria 1853
29 Ga0105245_10002886 3300009098 Bacteria 15430
30 Ga0114129_10028283 3300009147 Bacteria 7943
31 Ga0114129_10120086 3300009147 Bacteria 3620
32 Ga0105238_10097315 3300009551 Bacteria 2929
33 Ga0163162_10156123 3300013306 Bacteria 2402
34 Ga0157375_10179667 3300013308 Bacteria 2267
35 Ga0213876_10030113 3300021384 Bacteria 2862
36 Ga0209758_1000075 3300025297 Bacteria 271585
37 Ga0209758_1000183 3300025297 Bacteria 140623
38 Ga0207688_10014818 3300025901 Bacteria 4231
39 Ga0207707_10178567 3300025912 Bacteria 1854
40 Ga0207707_10188594 3300025912 Bacteria 1799
41 Ga0207695_10000946 3300025913 Bacteria 51636
42 Ga0207695_10003359 3300025913 Bacteria 22615
43 Ga0207652_10378889 3300025921 Bacteria 1277
44 Ga0207687_10057291 3300025927 Bacteria 2737
45 Ga0207706_10196048 3300025933 Bacteria 1772
46 Ga0207670_10103894 3300025936 Bacteria 2034
47 Ga0207669_10042181 3300025937 Bacteria 2661
48 Ga0207665_10009950 3300025939 Bacteria 6240
49 Ga0207683_10047901 3300026121 Bacteria 3742
50 Ga0265332_10003942 3300031238 Bacteria 7077
51 Ga0265325_10000044 3300031241 Bacteria 89107
52 Ga0265325_10001951 3300031241 Bacteria 14217
53 Ga0265325_10041983 3300031241 Bacteria 2394
54 Ga0265340_10004370 3300031247 Bacteria 7913
55 Ga0265340_10022260 3300031247 Bacteria 3242
56 Ga0265331_10008681 3300031250 Bacteria 5760
57 Ga0265327_10001956 3300031251 Bacteria 23626
58 Ga0265316_10000511 3300031344 Bacteria 43817
59 Ga0265316_10015250 3300031344 Bacteria 6727
60 Ga0265313_10040548 3300031595 Bacteria 2301
61 Ga0265314_10191682 3300031711 Unclassified 1216
62 Ga0265342_10000059 3300031712 Bacteria 118337
63 Ga0265342_10000309 3300031712 Bacteria 55309
64 Ga0373936_0000747 3300035113 Bacteria 11389
65 Ga0373945_0011785 3300035116 Bacteria 2895
66 Ga0373953_0000310 3300035117 Bacteria 13040
67 Ga0373954_0000335 3300035118 Bacteria 17259
68 Ga0373943_0011266 3300035170 Bacteria 4023
69 Ga0373943_0022747 3300035170 Bacteria 2909
70 Ga0373955_0000061 3300035172 Bacteria 42652
71 Ga0373955_0084031 3300035172 Unclassified 1804
72 Ga0373924_0001541 3300035410 Bacteria 7521
73 Ga0373935_0005755 3300035692 Bacteria 7328
74 Ga0373927_0096876 3300035695 Unclassified 1917
75 Ga0373933_0001141 3300035724 Bacteria 15765
76 Ga0373947_0012933 3300035725 Bacteria 4786
77 Ga0373947_0026132 3300035725 Bacteria 3409
78 Ga0373937_0000902 3300036401 Bacteria 25312
79 Ga0373937_0014030 3300036401 Bacteria 7065
80 Ga0373925_0000047 3300037068 Bacteria 130221
81 Ga0373925_0032661 3300037068 Bacteria 3832
82 Ga0436365_1259225 3300039437 Bacteria 6424
83 Ga0451577_0020905 3300042876 Bacteria 6000
84 Ga0451577_0038499 3300042876 Bacteria 4302
85 Ga0466972_0011264 3300044658 Bacteria 4488
86 Ga0453684_0002319 3300044712 Bacteria 46727
87 Ga0453684_0160240 3300044712 Bacteria 2662
88 Ga0451576_0000724 3300045051 Bacteria 66525
89 Ga0495592_0000323 3300046454 Bacteria 39878
90 Ga0495592_0134182 3300046454 Unclassified 1728
91 Ga0495629_0001603 3300046459 Bacteria 17785
92 Ga0495638_0023606 3300046460 Bacteria 4020
93 Ga0495651_0000168 3300046462 Bacteria 48211
94 Ga0495653_0000027 3300046463 Bacteria 154096
95 Ga0495653_0036793 3300046463 Bacteria 3852
96 Ga0495580_0097071 3300046472 Bacteria 2049
97 Ga0495662_0009064 3300046476 Bacteria 4886
98 Ga0495662_0052037 3300046476 Bacteria 1977
99 Ga0495664_0000021 3300046477 Bacteria 145551
100 Ga0495664_0033442 3300046477 Bacteria 3021
101 Ga0495585_0004988 3300046492 Bacteria 8487
102 Ga0495607_0060828 3300046501 Unclassified 2148
103 Ga0495608_0000020 3300046511 Bacteria 169036
104 Ga0495618_0000052 3300046514 Bacteria 85440
105 Ga0495618_0145019 3300046514 Bacteria 1518
106 Ga0495628_0000005 3300046516 Bacteria 420969
107 Ga0495628_0008979 3300046516 Bacteria 8550
108 Ga0495630_0000272 3300046517 Bacteria 42046
109 Ga0495630_0089034 3300046517 Bacteria 2331
110 Ga0495644_0005846 3300046523 Bacteria 4805
111 Ga0495652_0000001 3300046529 Bacteria 1045081
112 Ga0495652_0083802 3300046529 Unclassified 2623
113 Ga0495665_0069968 3300046531 Unclassified 1849
114 Ga0495640_0000035 3300046533 Bacteria 73471
115 Ga0495587_0000017 3300046536 Bacteria 172923
116 Ga0495587_0037789 3300046536 Bacteria 2897
117 Ga0495645_0000014 3300046543 Bacteria 172712
118 Ga0495622_0028005 3300046557 Unclassified 2630
119 Ga0495667_0002497 3300046559 Bacteria 12288
120 Ga0495667_0016479 3300046559 Bacteria 4992
121 Ga0495656_0014262 3300046615 Bacteria 2976
122 Ga0495634_0000006 3300046642 Bacteria 172775
123 Ga0495634_0101663 3300046642 Bacteria 1857
124 Ga0495634_0107614 3300046642 Unclassified 1795
125 Ga0495611_0069859 3300046648 Unclassified 1605
126 Ga0495635_0000030 3300046663 Bacteria 117651
127 Ga0495659_0021234 3300046664 Unclassified 2187
128 Ga0495657_0000607 3300046675 Bacteria 32644
129 Ga0495599_0000002 3300046678 Bacteria 348168
130 Ga0495623_0000089 3300046679 Bacteria 53855
131 Ga0495646_0000018 3300046680 Bacteria 121135
132 Ga0495647_0038870 3300046681 Unclassified 1800
133 Ga0495658_0006277 3300046683 Bacteria 5843
134 Ga0495658_0030831 3300046683 Bacteria 2915
135 Ga0495613_0057883 3300046689 Unclassified 2845
136 Ga0495624_0004091 3300046690 Bacteria 10730
137 Ga0495624_0083000 3300046690 Bacteria 1982
138 Ga0495600_0000048 3300046809 Bacteria 70636
139 Ga0495600_0009102 3300046809 Bacteria 6123
140 Ga0495581_0007274 3300047315 Bacteria 6403
141 Ga0495604_0000007 3300047317 Bacteria 412174
142 Ga0495674_0000001 3300047319 Bacteria 778665
143 Ga0495674_0171145 3300047319 Bacteria 1812
144 Ga0495680_0000308 3300047322 Bacteria 54837
145 Ga0495680_0011370 3300047322 Bacteria 7880
146 Ga0495675_0000452 3300047444 Bacteria 27199
147 Ga0495684_0000009 3300047471 Bacteria 199436
148 Ga0495684_0006371 3300047471 Bacteria 9164
149 Ga0495593_0001086 3300047673 Bacteria 15883
150 Ga0495593_0009146 3300047673 Bacteria 5747
151 Ga0495602_0000004 3300048088 Bacteria 326932
152 Ga0495614_0023088 3300048089 Unclassified 2683
153 Ga0496101_0156240 3300048904 Bacteria 1747
154 Ga0496104_0008889 3300048907 Bacteria 8927
155 Ga0496104_0056862 3300048907 Bacteria 3701
156 Ga0496104_0105959 3300048907 Bacteria 2694
157 Ga0496107_0153768 3300048910 Bacteria 1703
158 Ga0496109_0034430 3300048912 Bacteria 4561
159 Ga0496114_0064923 3300048917 Bacteria 3058
160 Ga0496114_0177218 3300048917 Bacteria 1860
161 Ga0496115_0065954 3300048918 Bacteria 2925
162 Ga0501034_0119029 3300049571 Bacteria 2628
163 Ga0501039_0247227 3300049575 Unclassified 1403
164 Ga0501047_0103879 3300049581 Bacteria 2722
165 Ga0501073_0061754 3300049589 Bacteria 2614
166 Ga0501080_0231859 3300049742 Unclassified 1687
167 Ga0501083_0024209 3300049744 Bacteria 4208
168 nmdc:mga03n38_84048_c1 3300050490 Bacteria 1502
169 nmdc:mga00v17_82649_c1 3300050491 Bacteria 2008
170 nmdc:mga0yw44_13899_c1 3300050492 Bacteria 4255
171 nmdc:mga0yw44_48770_c1 3300050492 Bacteria 2554
172 nmdc:mga0k408_3948_c1 3300050493 Bacteria 4659
173 nmdc:mga06z11_113809_c1 3300050494 Bacteria 1501
174 nmdc:mga05p37_221271_c1 3300050507 Bacteria 2284
175 nmdc:mga05p37_30643_c1 3300050507 Bacteria 6564
176 nmdc:mga08y16_40102_c1 3300050511 Bacteria 4909
177 nmdc:mga08x19_28950_c1 3300050514 Unclassified 3473
178 nmdc:mga08x19_51583_c1 3300050514 Bacteria 2643
179 Ga0495601_0000020 3300053077 Bacteria 160011
180 Ga0495601_0019232 3300053077 Bacteria 4164
181 Ga0495601_0167706 3300053077 Bacteria 1435
182 Ga0495612_0000020 3300053078 Bacteria 137759
183 Ga0495612_0002291 3300053078 Bacteria 7883
184 Ga0495595_0000047 3300053084 Bacteria 62097
185 Ga0495595_0002698 3300053084 Bacteria 6963
186 Ga0495595_0068797 3300053084 Bacteria 1670
187 Ga0495619_0000011 3300053085 Bacteria 287128
188 Ga0495619_0025902 3300053085 Bacteria 3770
189 Ga0500593_029769 3300053117 Bacteria 2439
190 Ga0500658_0089215 3300053134 Bacteria 1331
191 Ga0500645_000143 3300053730 Bacteria 56081

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006914 Ga0075436_100147130 Ga0075436_1001471302 321
2 3300007076 Ga0075435_100100324 Ga0075435_1001003242 321
3 3300006880 Ga0075429_100146928 Ga0075429_1001469282 323
4 3300037068 Ga0373925_0032661 Ga0373925_0032661_1921_3102 328
5 3300003320 rootH2_10064588 rootH2_100645881 331
6 3300053134 Ga0500658_0089215 Ga0500658_0089215_84_1205 334
7 3300025912 Ga0207707_10188594 Ga0207707_101885942 335
8 3300031247 Ga0265340_10022260 Ga0265340_100222603 336
9 3300049571 Ga0501034_0119029 Ga0501034_0119029_1246_2400 337
10 3300031251 Ga0265327_10001956 Ga0265327_1000195626 338
11 3300031344 Ga0265316_10000511 Ga0265316_1000051125 338
12 3300044712 Ga0453684_0002319 Ga0453684_0002319_29573_30703 338
13 3300031344 Ga0265316_10015250 Ga0265316_100152505 339
14 iso_pu_bacteria 2643221547 2643755338 339
15 3300005340 Ga0070689_100105937 Ga0070689_1001059372 340
16 3300006038 Ga0075365_10037207 Ga0075365_100372072 340
17 3300006195 Ga0075366_10005551 Ga0075366_100055514 340
18 3300025297 Ga0209758_1000183 Ga0209758_100018323 340
19 3300048907 Ga0496104_0105959 Ga0496104_0105959_1178_2290 340
20 3300048917 Ga0496114_0177218 Ga0496114_0177218_594_1706 340
21 3300049742 Ga0501080_0231859 Ga0501080_0231859_194_1306 340
22 3300050493 nmdc:mga0k408_3948_c1 nmdc:mga0k408_3948_c1_2724_3836 340
23 3300050494 nmdc:mga06z11_113809_c1 nmdc:mga06z11_113809_c1_277_1389 340
24 3300005354 Ga0070675_100057542 Ga0070675_1000575421 341
25 3300005356 Ga0070674_100060630 Ga0070674_1000606302 341
26 3300005456 Ga0070678_100139188 Ga0070678_1001391882 341
27 3300013306 Ga0163162_10156123 Ga0163162_101561232 341
28 3300013308 Ga0157375_10179667 Ga0157375_101796672 341
29 3300025901 Ga0207688_10014818 Ga0207688_100148183 341
30 3300025936 Ga0207670_10103894 Ga0207670_101038942 341
31 3300025937 Ga0207669_10042181 Ga0207669_100421812 341
32 3300026121 Ga0207683_10047901 Ga0207683_100479012 341
33 3300031241 Ga0265325_10001951 Ga0265325_100019512 341
34 3300031595 Ga0265313_10040548 Ga0265313_100405483 341
35 3300031711 Ga0265314_10191682 Ga0265314_101916821 341
36 3300031712 Ga0265342_10000059 Ga0265342_10000059101 341
37 3300049589 Ga0501073_0061754 Ga0501073_0061754_863_1981 341
38 3300050492 nmdc:mga0yw44_13899_c1 nmdc:mga0yw44_13899_c1_1326_2558 341
39 3300053730 Ga0500645_000143 Ga0500645_000143_8712_9884 341
40 3300006914 Ga0075436_100108106 Ga0075436_1001081062 342
41 3300009093 Ga0105240_10000832 Ga0105240_1000083255 342
42 3300009093 Ga0105240_10001571 Ga0105240_1000157136 342
43 3300025913 Ga0207695_10000946 Ga0207695_1000094645 342
44 3300025913 Ga0207695_10003359 Ga0207695_1000335922 342
45 3300044658 Ga0466972_0011264 Ga0466972_0011264_2783_3904 342
46 3300045051 Ga0451576_0000724 Ga0451576_0000724_31643_32779 342
47 3300048907 Ga0496104_0056862 Ga0496104_0056862_1351_2478 342
48 3300048912 Ga0496109_0034430 Ga0496109_0034430_1748_2875 342
49 3300050514 nmdc:mga08x19_51583_c1 nmdc:mga08x19_51583_c1_526_1680 342
50 3300053084 Ga0495595_0068797 Ga0495595_0068797_177_1304 342
51 3300053117 Ga0500593_029769 Ga0500593_029769_777_1910 342
52 3300005347 Ga0070668_100200978 Ga0070668_1002009781 343
53 3300007076 Ga0075435_100041785 Ga0075435_1000417851 343
54 3300009094 Ga0111539_10018475 Ga0111539_100184758 343
55 3300009147 Ga0114129_10120086 Ga0114129_101200864 343
56 3300025921 Ga0207652_10378889 Ga0207652_103788891 343
57 3300031241 Ga0265325_10000044 Ga0265325_1000004459 343
58 3300035172 Ga0373955_0084031 Ga0373955_0084031_450_1613 343
59 3300035695 Ga0373927_0096876 Ga0373927_0096876_294_1457 343
60 3300036401 Ga0373937_0014030 Ga0373937_0014030_1182_2345 343
61 3300046454 Ga0495592_0134182 Ga0495592_0134182_194_1357 343
62 3300046463 Ga0495653_0036793 Ga0495653_0036793_1069_2241 343
63 3300046472 Ga0495580_0097071 Ga0495580_0097071_588_1751 343
64 3300046477 Ga0495664_0033442 Ga0495664_0033442_1768_2940 343
65 3300046492 Ga0495585_0004988 Ga0495585_0004988_42_1205 343
66 3300046501 Ga0495607_0060828 Ga0495607_0060828_425_1588 343
67 3300046516 Ga0495628_0008979 Ga0495628_0008979_3376_4548 343
68 3300046517 Ga0495630_0089034 Ga0495630_0089034_686_1849 343
69 3300046523 Ga0495644_0005846 Ga0495644_0005846_189_1352 343
70 3300046529 Ga0495652_0083802 Ga0495652_0083802_971_2143 343
71 3300046531 Ga0495665_0069968 Ga0495665_0069968_516_1679 343
72 3300046536 Ga0495587_0037789 Ga0495587_0037789_654_1817 343
73 3300046557 Ga0495622_0028005 Ga0495622_0028005_1296_2459 343
74 3300046559 Ga0495667_0016479 Ga0495667_0016479_1362_2534 343
75 3300046615 Ga0495656_0014262 Ga0495656_0014262_1571_2734 343
76 3300046642 Ga0495634_0107614 Ga0495634_0107614_350_1513 343
77 3300046648 Ga0495611_0069859 Ga0495611_0069859_42_1205 343
78 3300046664 Ga0495659_0021234 Ga0495659_0021234_855_2018 343
79 3300046681 Ga0495647_0038870 Ga0495647_0038870_450_1613 343
80 3300046683 Ga0495658_0030831 Ga0495658_0030831_675_1847 343
81 3300046689 Ga0495613_0057883 Ga0495613_0057883_1590_2753 343
82 3300046690 Ga0495624_0083000 Ga0495624_0083000_166_1329 343
83 3300046809 Ga0495600_0009102 Ga0495600_0009102_1541_2713 343
84 3300047322 Ga0495680_0011370 Ga0495680_0011370_4059_5231 343
85 3300047471 Ga0495684_0006371 Ga0495684_0006371_2343_3515 343
86 3300047673 Ga0495593_0009146 Ga0495593_0009146_4492_5655 343
87 3300048089 Ga0495614_0023088 Ga0495614_0023088_450_1613 343
88 3300049581 Ga0501047_0103879 Ga0501047_0103879_43_1194 343
89 3300050507 nmdc:mga05p37_30643_c1 nmdc:mga05p37_30643_c1_4025_5194 343
90 3300050511 nmdc:mga08y16_40102_c1 nmdc:mga08y16_40102_c1_23_1174 343
91 3300053077 Ga0495601_0019232 Ga0495601_0019232_1010_2182 343
92 3300053078 Ga0495612_0002291 Ga0495612_0002291_6380_7552 343
93 3300053084 Ga0495595_0002698 Ga0495595_0002698_1075_2247 343
94 3300053085 Ga0495619_0025902 Ga0495619_0025902_1234_2406 343
95 3300005937 Ga0081455_10000659 Ga0081455_1000065942 345
96 3300007076 Ga0075435_100244642 Ga0075435_1002446422 345
97 3300009094 Ga0111539_10305027 Ga0111539_103050272 345
98 3300025933 Ga0207706_10196048 Ga0207706_101960482 345
99 3300006042 Ga0075368_10075649 Ga0075368_100756492 346
100 3300006051 Ga0075364_10146797 Ga0075364_101467972 346
101 3300006178 Ga0075367_10134493 Ga0075367_101344931 346
102 3300006186 Ga0075369_10078222 Ga0075369_100782222 346
103 3300009147 Ga0114129_10028283 Ga0114129_100282832 346
104 3300046460 Ga0495638_0023606 Ga0495638_0023606_2274_3419 346
105 3300046514 Ga0495618_0145019 Ga0495618_0145019_247_1449 346
106 3300046642 Ga0495634_0101663 Ga0495634_0101663_118_1320 346
107 3300048907 Ga0496104_0008889 Ga0496104_0008889_7692_8891 346
108 3300050490 nmdc:mga03n38_84048_c1 nmdc:mga03n38_84048_c1_248_1384 346
109 3300050491 nmdc:mga00v17_82649_c1 nmdc:mga00v17_82649_c1_69_1205 346
110 3300050492 nmdc:mga0yw44_48770_c1 nmdc:mga0yw44_48770_c1_1351_2487 346
111 3300050507 nmdc:mga05p37_221271_c1 nmdc:mga05p37_221271_c1_904_2046 346
112 3300042876 Ga0451577_0020905 Ga0451577_0020905_3298_4461 347
113 3300042876 Ga0451577_0038499 Ga0451577_0038499_484_1647 347
114 3300044712 Ga0453684_0160240 Ga0453684_0160240_249_1412 347
115 3300006358 Ga0068871_100009725 Ga0068871_1000097252 348
116 3300009551 Ga0105238_10097315 Ga0105238_100973152 348
117 3300025927 Ga0207687_10057291 Ga0207687_100572912 348
118 3300005458 Ga0070681_10106160 Ga0070681_101061602 349
119 3300006028 Ga0070717_10183482 Ga0070717_101834821 349
120 3300009098 Ga0105245_10002886 Ga0105245_1000288611 349
121 3300025939 Ga0207665_10009950 Ga0207665_100099502 349
122 3300031238 Ga0265332_10003942 Ga0265332_100039426 349
123 3300031241 Ga0265325_10041983 Ga0265325_100419832 349
124 3300031247 Ga0265340_10004370 Ga0265340_100043705 349
125 3300031250 Ga0265331_10008681 Ga0265331_100086812 349
126 3300031712 Ga0265342_10000309 Ga0265342_1000030944 349
127 3300035113 Ga0373936_0000747 Ga0373936_0000747_6601_7785 349
128 3300035116 Ga0373945_0011785 Ga0373945_0011785_724_1908 349
129 3300035117 Ga0373953_0000310 Ga0373953_0000310_9004_10188 349
130 3300035118 Ga0373954_0000335 Ga0373954_0000335_232_1416 349
131 3300035170 Ga0373943_0011266 Ga0373943_0011266_2592_3746 349
132 3300035172 Ga0373955_0000061 Ga0373955_0000061_34776_35960 349
133 3300035410 Ga0373924_0001541 Ga0373924_0001541_832_2016 349
134 3300035692 Ga0373935_0005755 Ga0373935_0005755_283_1467 349
135 3300035724 Ga0373933_0001141 Ga0373933_0001141_10265_11449 349
136 3300035725 Ga0373947_0012933 Ga0373947_0012933_918_2102 349
137 3300036401 Ga0373937_0000902 Ga0373937_0000902_7914_9098 349
138 3300037068 Ga0373925_0000047 Ga0373925_0000047_18525_19709 349
139 3300046454 Ga0495592_0000323 Ga0495592_0000323_2436_3620 349
140 3300046459 Ga0495629_0001603 Ga0495629_0001603_2837_4021 349
141 3300046462 Ga0495651_0000168 Ga0495651_0000168_39409_40593 349
142 3300046463 Ga0495653_0000027 Ga0495653_0000027_110606_111790 349
143 3300046476 Ga0495662_0009064 Ga0495662_0009064_145_1329 349
144 3300046476 Ga0495662_0052037 Ga0495662_0052037_744_1883 349
145 3300046477 Ga0495664_0000021 Ga0495664_0000021_33778_34962 349
146 3300046511 Ga0495608_0000020 Ga0495608_0000020_151272_152456 349
147 3300046514 Ga0495618_0000052 Ga0495618_0000052_6751_7935 349
148 3300046516 Ga0495628_0000005 Ga0495628_0000005_204489_205673 349
149 3300046517 Ga0495630_0000272 Ga0495630_0000272_10545_11729 349
150 3300046529 Ga0495652_0000001 Ga0495652_0000001_873493_874677 349
151 3300046533 Ga0495640_0000035 Ga0495640_0000035_36050_37234 349
152 3300046536 Ga0495587_0000017 Ga0495587_0000017_153753_154937 349
153 3300046543 Ga0495645_0000014 Ga0495645_0000014_110573_111757 349
154 3300046559 Ga0495667_0002497 Ga0495667_0002497_6049_7233 349
155 3300046642 Ga0495634_0000006 Ga0495634_0000006_1306_2490 349
156 3300046663 Ga0495635_0000030 Ga0495635_0000030_5908_7092 349
157 3300046675 Ga0495657_0000607 Ga0495657_0000607_5617_6801 349
158 3300046678 Ga0495599_0000002 Ga0495599_0000002_44074_45258 349
159 3300046679 Ga0495623_0000089 Ga0495623_0000089_25504_26688 349
160 3300046680 Ga0495646_0000018 Ga0495646_0000018_9348_10532 349
161 3300046683 Ga0495658_0006277 Ga0495658_0006277_3751_4935 349
162 3300046690 Ga0495624_0004091 Ga0495624_0004091_9157_10311 349
163 3300046809 Ga0495600_0000048 Ga0495600_0000048_14224_15408 349
164 3300047315 Ga0495581_0007274 Ga0495581_0007274_304_1488 349
165 3300047317 Ga0495604_0000007 Ga0495604_0000007_240543_241727 349
166 3300047319 Ga0495674_0000001 Ga0495674_0000001_152425_153609 349
167 3300047322 Ga0495680_0000308 Ga0495680_0000308_5124_6308 349
168 3300047444 Ga0495675_0000452 Ga0495675_0000452_10076_11260 349
169 3300047471 Ga0495684_0000009 Ga0495684_0000009_170450_171634 349
170 3300047673 Ga0495593_0001086 Ga0495593_0001086_6141_7325 349
171 3300048088 Ga0495602_0000004 Ga0495602_0000004_215177_216361 349
172 3300048904 Ga0496101_0156240 Ga0496101_0156240_371_1537 349
173 3300048910 Ga0496107_0153768 Ga0496107_0153768_300_1466 349
174 3300048917 Ga0496114_0064923 Ga0496114_0064923_880_2046 349
175 3300048918 Ga0496115_0065954 Ga0496115_0065954_1595_2761 349
176 3300049575 Ga0501039_0247227 Ga0501039_0247227_50_1228 349
177 3300049744 Ga0501083_0024209 Ga0501083_0024209_52_1230 349
178 3300050514 nmdc:mga08x19_28950_c1 nmdc:mga08x19_28950_c1_904_2085 349
179 3300053077 Ga0495601_0000020 Ga0495601_0000020_6469_7653 349
180 3300053078 Ga0495612_0000020 Ga0495612_0000020_25989_27173 349
181 3300053084 Ga0495595_0000047 Ga0495595_0000047_17172_18356 349
182 3300053085 Ga0495619_0000011 Ga0495619_0000011_110546_111730 349
183 iso_pu_bacteria 2524023205 2524443205 349
184 3300006028 Ga0070717_10020161 Ga0070717_100201619 350
185 3300021384 Ga0213876_10030113 Ga0213876_100301132 350
186 3300025912 Ga0207707_10178567 Ga0207707_101785672 350
187 3300035170 Ga0373943_0022747 Ga0373943_0022747_414_1658 350
188 3300035725 Ga0373947_0026132 Ga0373947_0026132_441_1685 350
189 3300039437 Ga0436365_1259225 Ga0436365_1259225_1466_2671 350
190 3300047319 Ga0495674_0171145 Ga0495674_0171145_348_1592 350
191 3300053077 Ga0495601_0167706 Ga0495601_0167706_101_1345 350
192 iso_pu_bacteria 2744054633 2745076108 350
193 iso_pu_bacteria 2824753945 2824755323 350
194 iso_pu_bacteria 2824763712 2824771070 350
195 iso_pu_bacteria 2904711408 2904717808 350
196 iso_pu_bacteria 2935810662 2935812079 351
197 iso_pu_bacteria 2936037263 2936038673 351
198 3300003215 JGI25153J46596_10000168 JGI25153J46596_1000016835 353
199 3300025297 Ga0209758_1000075 Ga0209758_1000075155 353

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00534

Glycos_transf_1

Glycosyl transferases group 1

262

430

0.9

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

273

416

0.88

PF13524

Glyco_trans_1_2

Glycosyl transferases group 1

292

444

0.87

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

101

263

0.84

PF13477

Glyco_trans_4_2

Glycosyl transferase 4-like

85

225

0.83

PF20706

GT4-conflict

Family 4 Glycosyltransferase in conflict systems

238

443

0.79

PF13579

Glyco_trans_4_4

Glycosyl transferase 4-like domain

99

256

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vfn-assembly1.cif.gz_A crystal structure of sdgb (sd peptide-binding form) 0.864 128 352
7vfm-assembly1.cif.gz_A crystal structure of sdgb (udp and sd peptide-binding form) 0.8639 128 352
7ec6-assembly1.cif.gz_A crystal structure of sdgb (complexed with peptides) 0.8558 128 352
7ec7-assembly2.cif.gz_B crystal structure of sdgb (complexed with phosphate ions) 0.8347 128 346
4x7r-assembly1.cif.gz_A crystal structure of s. aureus tarm g117r mutant in complex with fondaparinux, alpha-glcnac-glycerol and udp 0.8258 96 353
ID Description Score Start End Superfamily
af_Q4D163_355_523_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9143 173 329 3.40.50.2000
af_Q2G0L2_318_480_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9019 172 332 3.40.50.2000
af_Q58577_179_333_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9012 172 332 3.40.50.2000
4x6lA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.901 163 334 3.40.50.2000
af_P9WMY5_198_350_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8991 172 329 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A176ZDX6-F1-model_v4 Glycosyltransferase subfamily 4-like N-terminal domain-containing protein 0.9782 43 353 GO:0016758
AF-Q2IZV0-F1-model_v4 Glycosyl transferase, group 1 0.9765 9 350 GO:0016758
AF-A0A858QBR3-F1-model_v4 Glycosyltransferase 0.9673 9 353 GO:0016757
AF-A0A1C3YDE7-F1-model_v4 Glycosyltransferase involved in cell wall bisynthesis 0.9665 11 348 GO:0016757
AF-A0A2S6G644-F1-model_v4 Glycosyl transferase family 1 0.9663 177 353 GO:0016757

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