F305198

General Info

Members Datasets Scaffolds Average Seq Length
198 165 396 251

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8054160619|8054160682
Length 297
Sequence RPPREPNGGQEAGTPGRGGGQGGSGQARRPGRAVGEGGAPGGAPVLPGLGGQVVLVTGASGGIGRGIALRFAAAGADVVVHHRAGREAARALVGEIERGGGSALAIRADLTAEAECHRLVAEAAGWRGRLTGLVNNAGVQPTQDLAGMSLADWRAVADPNVHSVFACTQAAAEVLRAGGGGWVTHIASIEADRPAPRHAHYCASKAAVVMHARAAALEYGAYGIRVNSVSPGLIDRPGLAGDWSEGVRRWQRAAPLGRLGRPEDIGDACVFLASPMASWITGHDLVVDGGVSARPTW

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
11 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
14 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
15 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
16 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
17 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
18 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
19 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
20 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
21 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
22 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
23 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
24 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
37 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
38 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
39 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
40 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
41 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
42 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
43 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
44 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
45 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
46 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
47 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
48 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
49 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
50 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
51 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
52 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
53 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
54 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
55 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
56 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
57 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
58 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
59 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
60 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
61 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
62 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
65 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
66 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
67 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
68 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
69 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
72 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
73 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
74 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
77 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
78 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
79 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
80 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
81 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
82 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
83 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
84 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
85 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
86 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
87 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
88 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
89 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
90 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
91 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
92 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
93 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
94 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
95 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
98 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
99 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
100 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
101 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
102 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
103 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
104 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
105 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
106 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
121 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
122 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
123 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
124 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
125 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
126 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
127 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
128 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
129 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
130 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
131 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
132 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
133 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
134 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
135 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
136 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
137 2808606448 Streptomyces sp. 193411 Isolate Unclassified
138 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
139 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
140 2867475112 Streptomyces sp. TM32 Isolate Unclassified
141 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
142 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
143 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
144 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
145 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
146 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
147 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
148 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
149 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
150 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
151 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
152 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
153 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
154 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
155 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
156 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
157 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
158 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
159 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
160 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
161 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
162 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
163 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
164 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
165 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.3
Metatranscriptomes 0
Isolates 19.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.57
Nodule 0
Rhizoplane 3.54
Rhizosphere 67.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10009384 3300003203 Bacteria 4383
2 rootH1_10052017 3300003323 Bacteria 2701
3 JGI25160J50197_1029218 3300003354 Bacteria 1463
4 Ga0070668_100015855 3300005347 Bacteria 5637
5 Ga0070714_100002129 3300005435 Bacteria 14552
6 Ga0070713_100050061 3300005436 Bacteria 3449
7 Ga0070663_100000614 3300005455 Bacteria 19116
8 Ga0070665_100269315 3300005548 Bacteria 1705
9 Ga0070665_100713886 3300005548 Bacteria 1016
10 Ga0068857_100217830 3300005577 Bacteria 1743
11 Ga0068854_100036968 3300005578 Bacteria 3424
12 Ga0068854_100337228 3300005578 Bacteria 1230
13 Ga0068852_100072876 3300005616 Bacteria 3020
14 Ga0081539_10000472 3300005985 Bacteria 85180
15 Ga0075363_100006960 3300006048 Bacteria 5171
16 Ga0075363_100112281 3300006048 Bacteria 1516
17 Ga0105241_10075349 3300009174 Bacteria 2629
18 Ga0105237_10385357 3300009545 Bacteria 1407
19 Ga0105239_10179401 3300010375 Bacteria 2369
20 Ga0157374_10037126 3300013296 Bacteria 4469
21 Ga0157375_10427922 3300013308 Bacteria 1490
22 Ga0182008_10001731 3300014497 Bacteria 14326
23 Ga0182006_1076153 3300015261 Bacteria 1233
24 Ga0182007_10000540 3300015262 Bacteria 22304
25 Ga0209758_1011557 3300025297 Bacteria 5090
26 Ga0207426_1001815 3300025302 Bacteria 15828
27 Ga0207426_1086441 3300025302 Bacteria 839
28 Ga0207647_10027004 3300025904 Bacteria 3748
29 Ga0207654_10153881 3300025911 Bacteria 1479
30 Ga0207695_10022426 3300025913 Bacteria 7165
31 Ga0207671_10003378 3300025914 Bacteria 15976
32 Ga0207700_10098475 3300025928 Bacteria 2326
33 Ga0207664_10009907 3300025929 Bacteria 6711
34 Ga0207668_10057543 3300025972 Bacteria 2712
35 Ga0207640_10018935 3300025981 Bacteria 4055
36 Ga0207640_10159233 3300025981 Bacteria 1668
37 Ga0207678_10000194 3300026067 Bacteria 52678
38 Ga0207698_10089836 3300026142 Bacteria 2510
39 Ga0209371_1008902 3300027312 Bacteria 3262
40 Ga0268266_10224505 3300028379 Bacteria 1728
41 Ga0307515_10000928 3300028794 Bacteria 67239
42 Ga0307515_10122358 3300028794 Bacteria 2935
43 Ga0307515_10237549 3300028794 Bacteria 1600
44 Ga0307515_10239735 3300028794 Bacteria 1587
45 Ga0307515_10248809 3300028794 Bacteria 1534
46 Ga0268256_1008832 3300030500 Bacteria 3415
47 Ga0307511_10000945 3300030521 Bacteria 30807
48 Ga0307512_10002271 3300030522 Bacteria 24884
49 Ga0307512_10101235 3300030522 Bacteria 1950
50 Ga0265330_10041833 3300031235 Bacteria 2031
51 Ga0307513_10009050 3300031456 Bacteria 12629
52 Ga0307513_10049491 3300031456 Bacteria 4552
53 Ga0307509_10049478 3300031507 Bacteria 4506
54 Ga0307508_10042356 3300031616 Bacteria 4085
55 Ga0307508_10047093 3300031616 Bacteria 3847
56 Ga0307508_10108937 3300031616 Bacteria 2369
57 Ga0307514_10006009 3300031649 Bacteria 10682
58 Ga0307514_10169157 3300031649 Bacteria 1431
59 Ga0307516_10005425 3300031730 Bacteria 15271
60 Ga0307516_10007274 3300031730 Bacteria 12744
61 Ga0307518_10002222 3300031838 Bacteria 14195
62 Ga0307518_10011678 3300031838 Bacteria 6284
63 Ga0307518_10107988 3300031838 Bacteria 1985
64 Ga0307507_10007659 3300033179 Bacteria 15491
65 Ga0307507_10013300 3300033179 Bacteria 10013
66 Ga0307510_10009189 3300033180 Bacteria 11770
67 Ga0307510_10030172 3300033180 Bacteria 6151
68 Ga0307510_10032155 3300033180 Bacteria 5916
69 Ga0395898_0048375 3300037466 Bacteria 4171
70 Ga0400483_027012 3300039062 Bacteria 48133
71 Ga0400483_291151 3300039062 Bacteria 24438
72 Ga0451837_1762266 3300041494 Bacteria 2470
73 Ga0451853_2796399 3300041512 Bacteria 1513
74 Ga0439449_0002993 3300042007 Bacteria 6589
75 Ga0439455_0006060 3300042012 Bacteria 2488
76 Ga0439458_0000095 3300042157 Bacteria 17129
77 Ga0439458_0007942 3300042157 Bacteria 2360
78 Ga0466969_0014177 3300044656 Bacteria 4192
79 Ga0466969_0042008 3300044656 Bacteria 2285
80 Ga0466972_0004986 3300044658 Bacteria 6660
81 Ga0466972_0023190 3300044658 Bacteria 3087
82 Ga0466972_0075536 3300044658 Bacteria 1606
83 Ga0466965_0233364 3300044683 Bacteria 983
84 Ga0466965_0233818 3300044683 Bacteria 982
85 Ga0466961_0020962 3300044693 Bacteria 4205
86 Ga0466964_0136928 3300044706 Bacteria 1121
87 Ga0466971_0024148 3300044719 Bacteria 2712
88 Ga0466968_0003776 3300044735 Bacteria 5611
89 Ga0466968_0203634 3300044735 Bacteria 928
90 Ga0466967_0013355 3300045976 Bacteria 6342
91 Ga0495592_0001071 3300046454 Bacteria 18930
92 Ga0495590_0152180 3300046457 Bacteria 839
93 Ga0495629_0002230 3300046459 Bacteria 14936
94 Ga0495629_0004540 3300046459 Bacteria 10387
95 Ga0495638_0024486 3300046460 Bacteria 3936
96 Ga0495651_0003802 3300046462 Bacteria 11546
97 Ga0495653_0130954 3300046463 Bacteria 1776
98 Ga0495582_0045090 3300046473 Bacteria 2428
99 Ga0495662_0002065 3300046476 Bacteria 10068
100 Ga0495664_0001492 3300046477 Bacteria 12393
101 Ga0495594_0040925 3300046499 Bacteria 2538
102 Ga0495618_0009476 3300046514 Bacteria 5883
103 Ga0495628_0112864 3300046516 Bacteria 2089
104 Ga0495630_0012002 3300046517 Bacteria 6283
105 Ga0495666_0084540 3300046526 Bacteria 1499
106 Ga0495652_0006068 3300046529 Bacteria 11300
107 Ga0495586_0019625 3300046535 Bacteria 3600
108 Ga0495587_0003030 3300046536 Bacteria 11222
109 Ga0495645_0018579 3300046543 Bacteria 4995
110 Ga0495667_0017893 3300046559 Bacteria 4787
111 Ga0495634_0025201 3300046642 Bacteria 4167
112 Ga0495625_0041810 3300046660 Bacteria 3334
113 Ga0495625_0083476 3300046660 Bacteria 2221
114 Ga0495635_0000602 3300046663 Bacteria 23157
115 Ga0495588_0012672 3300046674 Bacteria 3991
116 Ga0495657_0004542 3300046675 Bacteria 11088
117 Ga0495646_0003707 3300046680 Bacteria 9542
118 Ga0495658_0046720 3300046683 Bacteria 2435
119 Ga0495613_0006909 3300046689 Bacteria 8467
120 Ga0495671_0009944 3300046692 Bacteria 5293
121 Ga0495649_0015198 3300046694 Bacteria 4382
122 Ga0495600_0017946 3300046809 Bacteria 4504
123 Ga0495581_0001188 3300047315 Bacteria 14280
124 Ga0495604_0004625 3300047317 Bacteria 10905
125 Ga0495674_0054964 3300047319 Bacteria 3493
126 Ga0495676_0019542 3300047321 Bacteria 5957
127 Ga0495687_002133 3300047443 Bacteria 16528
128 Ga0495675_0105157 3300047444 Bacteria 1764
129 Ga0495681_0001458 3300047470 Bacteria 17698
130 Ga0495593_0000360 3300047673 Bacteria 25155
131 Ga0495602_0019014 3300048088 Bacteria 6836
132 Ga0495614_0008858 3300048089 Bacteria 4465
133 Ga0496100_0091982 3300048903 Bacteria 2072
134 Ga0496102_0448811 3300048905 Bacteria 1210
135 Ga0496106_0166778 3300048909 Bacteria 1744
136 Ga0496108_0380652 3300048911 Bacteria 1232
137 Ga0496109_0090169 3300048912 Bacteria 2835
138 Ga0496110_0727017 3300048913 Bacteria 895
139 Ga0496111_0080737 3300048914 Bacteria 2373
140 Ga0501034_0079742 3300049571 Bacteria 3277
141 Ga0501038_0010153 3300049574 Bacteria 8619
142 Ga0501043_0160020 3300049579 Bacteria 1760
143 Ga0501046_0266595 3300049580 Bacteria 1257
144 Ga0501047_0099809 3300049581 Bacteria 2782
145 Ga0501070_0439884 3300049586 Bacteria 1052
146 Ga0501080_0255168 3300049742 Bacteria 1599
147 Ga0501080_0594508 3300049742 Bacteria 983
148 Ga0501035_0142350 3300049822 Bacteria 2084
149 Ga0501035_0187642 3300049822 Bacteria 1779
150 Ga0501044_0095851 3300049823 Bacteria 2989
151 Ga0501044_0186227 3300049823 Bacteria 2040
152 Ga0501044_0406963 3300049823 Bacteria 1272
153 Ga0500553_055523 3300053101 Bacteria 1881
154 Ga0500560_051113 3300053107 Bacteria 1326
155 Ga0500568_0002597 3300053139 Bacteria 10495
156 Ga0500573_0057801 3300053140 Bacteria 2225
157 Ga0500600_0071048 3300053149 Bacteria 1909
158 Ga0500624_006976 3300053157 Bacteria 1541
159 Ga0500636_0034215 3300053177 Bacteria 3008
160 8054160682 8054160619 Bacteria 7783213
161 2547412453 2547132111 Bacteria 8013147
162 2586063785 2585427649 Bacteria 9053857
163 2644443220 2643221678 Bacteria 9540101
164 2753071952 2751185734 Bacteria 8863695
165 2784588898 2784132148 Bacteria 8627943
166 2785369845 2784746768 Bacteria 10036182
167 2786670926 2786546132 Bacteria 10419719
168 2808842341 2808606359 Bacteria 9866990
169 2808920867 2808606375 Bacteria 9466072
170 2809232514 2808606448 Bacteria 8656184
171 2812480245 2811994917 Bacteria 7761064
172 2862285961 2862281513 Bacteria 9621493
173 2867480341 2867475112 Bacteria 6909112
174 2870722986 2870721527 Bacteria 9689237
175 2877680785 2877676314 Bacteria 9512378
176 2889793759 2889790730 Bacteria 5689708
177 2889918998 2889914905 Bacteria 5702301
178 2912719558 2912715099 Bacteria 9460473
179 2912731324 2912723979 Bacteria 8557534
180 2915772712 2915768154 Bacteria 8424322
181 2919471983 2919468124 Bacteria 9133025
182 2954006709 2954002825 Bacteria 9173742
183 2954385889 2954380949 Bacteria 10050426
184 2954677252 2954673503 Bacteria 9685905
185 2954686903 2954682443 Bacteria 9862841
186 2954696550 2954691527 Bacteria 10720516
187 2954705737 2954701450 Bacteria 10834262
188 2954715913 2954711539 Bacteria 10867210
189 2954725835 2954721474 Bacteria 10456478
190 2954735967 2954731030 Bacteria 10243860
191 2954744790 2954740390 Bacteria 10229294
192 2954754809 2954749733 Bacteria 10366972
193 2954763753 2954759201 Bacteria 9358192
194 2997458104 2997451912 Bacteria 8492419
195 3006499284 3006493962 Bacteria 8825450
196 8003324073 8003314358 Bacteria 10575343
197 8023625381 8023623736 Bacteria 8593882
198 8056833372 8056829672 Bacteria 9045328
199 JGI25406J46586_10009384
200 rootH1_10052017
201 JGI25160J50197_1029218
202 Ga0070668_100015855
203 Ga0070714_100002129
204 Ga0070713_100050061
205 Ga0070663_100000614
206 Ga0070665_100269315
207 Ga0070665_100713886
208 Ga0068857_100217830
209 Ga0068854_100036968
210 Ga0068854_100337228
211 Ga0068852_100072876
212 Ga0081539_10000472
213 Ga0075363_100006960
214 Ga0075363_100112281
215 Ga0105241_10075349
216 Ga0105237_10385357
217 Ga0105239_10179401
218 Ga0157374_10037126
219 Ga0157375_10427922
220 Ga0182008_10001731
221 Ga0182006_1076153
222 Ga0182007_10000540
223 Ga0209758_1011557
224 Ga0207426_1001815
225 Ga0207426_1086441
226 Ga0207647_10027004
227 Ga0207654_10153881
228 Ga0207695_10022426
229 Ga0207671_10003378
230 Ga0207700_10098475
231 Ga0207664_10009907
232 Ga0207668_10057543
233 Ga0207640_10018935
234 Ga0207640_10159233
235 Ga0207678_10000194
236 Ga0207698_10089836
237 Ga0209371_1008902
238 Ga0268266_10224505
239 Ga0307515_10000928
240 Ga0307515_10122358
241 Ga0307515_10237549
242 Ga0307515_10239735
243 Ga0307515_10248809
244 Ga0268256_1008832
245 Ga0307511_10000945
246 Ga0307512_10002271
247 Ga0307512_10101235
248 Ga0265330_10041833
249 Ga0307513_10009050
250 Ga0307513_10049491
251 Ga0307509_10049478
252 Ga0307508_10042356
253 Ga0307508_10047093
254 Ga0307508_10108937
255 Ga0307514_10006009
256 Ga0307514_10169157
257 Ga0307516_10005425
258 Ga0307516_10007274
259 Ga0307518_10002222
260 Ga0307518_10011678
261 Ga0307518_10107988
262 Ga0307507_10007659
263 Ga0307507_10013300
264 Ga0307510_10009189
265 Ga0307510_10030172
266 Ga0307510_10032155
267 Ga0395898_0048375
268 Ga0400483_027012
269 Ga0400483_291151
270 Ga0451837_1762266
271 Ga0451853_2796399
272 Ga0439449_0002993
273 Ga0439455_0006060
274 Ga0439458_0000095
275 Ga0439458_0007942
276 Ga0466969_0014177
277 Ga0466969_0042008
278 Ga0466972_0004986
279 Ga0466972_0023190
280 Ga0466972_0075536
281 Ga0466965_0233364
282 Ga0466965_0233818
283 Ga0466961_0020962
284 Ga0466964_0136928
285 Ga0466971_0024148
286 Ga0466968_0003776
287 Ga0466968_0203634
288 Ga0466967_0013355
289 Ga0495592_0001071
290 Ga0495590_0152180
291 Ga0495629_0002230
292 Ga0495629_0004540
293 Ga0495638_0024486
294 Ga0495651_0003802
295 Ga0495653_0130954
296 Ga0495582_0045090
297 Ga0495662_0002065
298 Ga0495664_0001492
299 Ga0495594_0040925
300 Ga0495618_0009476
301 Ga0495628_0112864
302 Ga0495630_0012002
303 Ga0495666_0084540
304 Ga0495652_0006068
305 Ga0495586_0019625
306 Ga0495587_0003030
307 Ga0495645_0018579
308 Ga0495667_0017893
309 Ga0495634_0025201
310 Ga0495625_0041810
311 Ga0495625_0083476
312 Ga0495635_0000602
313 Ga0495588_0012672
314 Ga0495657_0004542
315 Ga0495646_0003707
316 Ga0495658_0046720
317 Ga0495613_0006909
318 Ga0495671_0009944
319 Ga0495649_0015198
320 Ga0495600_0017946
321 Ga0495581_0001188
322 Ga0495604_0004625
323 Ga0495674_0054964
324 Ga0495676_0019542
325 Ga0495687_002133
326 Ga0495675_0105157
327 Ga0495681_0001458
328 Ga0495593_0000360
329 Ga0495602_0019014
330 Ga0495614_0008858
331 Ga0496100_0091982
332 Ga0496102_0448811
333 Ga0496106_0166778
334 Ga0496108_0380652
335 Ga0496109_0090169
336 Ga0496110_0727017
337 Ga0496111_0080737
338 Ga0501034_0079742
339 Ga0501038_0010153
340 Ga0501043_0160020
341 Ga0501046_0266595
342 Ga0501047_0099809
343 Ga0501070_0439884
344 Ga0501080_0255168
345 Ga0501080_0594508
346 Ga0501035_0142350
347 Ga0501035_0187642
348 Ga0501044_0095851
349 Ga0501044_0186227
350 Ga0501044_0406963
351 Ga0500553_055523
352 Ga0500560_051113
353 Ga0500568_0002597
354 Ga0500573_0057801
355 Ga0500600_0071048
356 Ga0500624_006976
357 Ga0500636_0034215
358 8054160682
359 2547412453
360 2586063785
361 2644443220
362 2753071952
363 2784588898
364 2785369845
365 2786670926
366 2808842341
367 2808920867
368 2809232514
369 2812480245
370 2862285961
371 2867480341
372 2870722986
373 2877680785
374 2889793759
375 2889918998
376 2912719558
377 2912731324
378 2915772712
379 2919471983
380 2954006709
381 2954385889
382 2954677252
383 2954686903
384 2954696550
385 2954705737
386 2954715913
387 2954725835
388 2954735967
389 2954744790
390 2954754809
391 2954763753
392 2997458104
393 3006499284
394 8003324073
395 8023625381
396 8056833372

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

52

247

0.95

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

58

292

0.95

PF08659

KR

KR domain

52

233

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
8jfa-assembly1.cif.gz_C crystal structure of 3-oxoacyl-acp reductase fabg in complex with nadph from helicobacter pylori 0.9404 29 207
4bmn-assembly1.cif.gz_D apo structure of short-chain alcohol dehydrogenase from ralstonia sp. dsm 6428 0.9367 28 210
4bmn-assembly1.cif.gz_B apo structure of short-chain alcohol dehydrogenase from ralstonia sp. dsm 6428 0.9328 28 210
4bmn-assembly1.cif.gz_C apo structure of short-chain alcohol dehydrogenase from ralstonia sp. dsm 6428 0.9309 28 210
4i5d-assembly1.cif.gz_A crystal structure of ralstonia sp. alcohol dehydrogenase in its apo form 0.9305 28 210
ID Description Score Start End Superfamily
af_A0A1D6J5I0_53_326_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9277 28 207 3.40.50.720
af_Q0JDU3_1_168_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9253 48 207 3.40.50.720
3tzqC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9229 28 206 3.40.50.720
4bmnA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9222 28 210 3.40.50.720
3cxrA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9211 29 211 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A5J6GE46-F1-model_v4 SDR family oxidoreductase 0.9597 33 214 GO:0016491
AF-A0A0S8BF15-F1-model_v4 Short-chain dehydrogenase 0.9595 28 214 GO:0016616
GO:0030497
AF-A0A840DJT4-F1-model_v4 NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) 0.9576 26 214
AF-A0A7V9VR96-F1-model_v4 deleted 0.9542 28 214
AF-A0A6J7RY54-F1-model_v4 Unannotated protein 0.9448 29 211 GO:0016491

Map