F304830

General Info

Members Datasets Scaffolds Average Seq Length
198 128 396 338

Family's Representative Sequence

Representative Sequence 3300046454|Ga0495592_0027108|Ga0495592_0027108_2566_3681
Length 371
Sequence VGAVQRGTGSPRGLKETLRGRPKPGKIQRMIQTVLNPGAVDEISVFRDTYLKAYRLMLLARLLDEKFASLYRAGKIHGGVFLGRGQEALSVSLGVALRKGDVFAPLIRDSAGRLAFGEPMLDAVRTYLGSRLGPMRARDGNIHRGRPKEGLLPMISHLGAMISVVNGMLFAHRLKGITGTVGAACIGDGATSTGSCHEALNQAAVEKLPLVLVVANNHYAYSTPNEKQFACRSLLDRAAGYGVEGCSVDGTDLEACLKVVGEAVERARTGRGPQMVLAELLRLCGHGEHDDAHYVDPQLKASLIGRDCLKFSEETLRGRNWANAETIAIWRNEAVQAIEEAIAGVQREAGPDPFKETWLAIASSHLSEGNE

Samples

Sample ID Description Type Environment
1 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
68 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
71 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
72 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
73 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
76 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
77 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
78 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
79 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
80 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
81 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
82 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
83 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
84 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
85 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
86 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
87 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
88 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
89 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
90 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
91 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
92 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
96 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
97 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
98 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
99 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
100 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
101 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
102 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
103 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
104 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
105 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
106 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
107 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
123 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
127 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
128 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.51
Nodule 0
Rhizoplane 1.52
Rhizosphere 97.47
Stem 0
Stem Tuber 0
Unclassified 14.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495592_0027108 3300046454 Bacteria 4344
2 rootH2_10001006 3300003320 Bacteria 11012
3 Ga0065715_10038139 3300005293 Unclassified 1359
4 Ga0065715_10106194 3300005293 Bacteria 2823
5 Ga0070683_100151548 3300005329 Bacteria 2198
6 Ga0070682_100281406 3300005337 Bacteria 1212
7 Ga0068868_100013363 3300005338 Bacteria 6021
8 Ga0070689_100003684 3300005340 Bacteria 10233
9 Ga0070689_100087846 3300005340 Unclassified 2446
10 Ga0070689_100128673 3300005340 Bacteria 2029
11 Ga0070671_100310870 3300005355 Unclassified 1342
12 Ga0070688_100037250 3300005365 Bacteria 2963
13 Ga0070688_100058315 3300005365 Bacteria 2431
14 Ga0070713_100174631 3300005436 Bacteria 1927
15 Ga0070713_100272062 3300005436 Bacteria 1551
16 Ga0070710_10192285 3300005437 Bacteria 1284
17 Ga0070711_100184691 3300005439 Unclassified 1598
18 Ga0070708_100538863 3300005445 Unclassified 1101
19 Ga0070662_100289400 3300005457 Bacteria 1328
20 Ga0070706_100373868 3300005467 Bacteria 1328
21 Ga0070707_100000997 3300005468 Bacteria 28037
22 Ga0070698_100001319 3300005471 Bacteria 27640
23 Ga0070699_100027930 3300005518 Bacteria 4867
24 Ga0070679_100155823 3300005530 Bacteria 2259
25 Ga0070679_100344817 3300005530 Bacteria 1437
26 Ga0070697_100191597 3300005536 Unclassified 1735
27 Ga0070672_100046320 3300005543 Bacteria 3369
28 Ga0070686_100004330 3300005544 Bacteria 7818
29 Ga0070704_100122596 3300005549 Bacteria 2000
30 Ga0068855_100074542 3300005563 Bacteria 3941
31 Ga0068855_100115914 3300005563 Bacteria 3071
32 Ga0068855_100178264 3300005563 Bacteria 2403
33 Ga0068855_100450915 3300005563 Bacteria 1404
34 Ga0068856_100000160 3300005614 Bacteria 69926
35 Ga0068856_100059114 3300005614 Bacteria 3786
36 Ga0068856_100137167 3300005614 Bacteria 2452
37 Ga0068856_100225173 3300005614 Bacteria 1891
38 Ga0068852_100284218 3300005616 Bacteria 1596
39 Ga0068859_100065249 3300005617 Bacteria 3675
40 Ga0068859_100218322 3300005617 Unclassified 1994
41 Ga0068859_100359148 3300005617 Bacteria 1552
42 Ga0068864_100066847 3300005618 Unclassified 3121
43 Ga0068863_100108305 3300005841 Bacteria 2644
44 Ga0068863_100122240 3300005841 Bacteria 2483
45 Ga0068863_100147977 3300005841 Bacteria 2247
46 Ga0070717_10062085 3300006028 Bacteria 3098
47 Ga0070717_10097941 3300006028 Bacteria 2485
48 Ga0097621_100009655 3300006237 Bacteria 7016
49 Ga0068871_100010845 3300006358 Bacteria 6671
50 Ga0075430_100140052 3300006846 Bacteria 2015
51 Ga0075431_100184445 3300006847 Bacteria 2140
52 Ga0075429_100162756 3300006880 Bacteria 1954
53 Ga0097620_100065249 3300006931 Bacteria 3675
54 Ga0097620_100218325 3300006931 Unclassified 1994
55 Ga0097620_100359171 3300006931 Bacteria 1552
56 Ga0105240_10000192 3300009093 Bacteria 124831
57 Ga0105240_10103994 3300009093 Bacteria 3449
58 Ga0105240_10177361 3300009093 Bacteria 2518
59 Ga0105240_10185169 3300009093 Bacteria 2453
60 Ga0111539_10047337 3300009094 Bacteria 5139
61 Ga0105238_10014935 3300009551 Bacteria 7861
62 Ga0105239_10051719 3300010375 Bacteria 4503
63 Ga0157372_10253331 3300013307 Bacteria 2044
64 Ga0163163_10035136 3300014325 Bacteria 4860
65 Ga0163163_10347042 3300014325 Bacteria 1540
66 Ga0157376_10069625 3300014969 Bacteria 2983
67 Ga0207697_10001999 3300025315 Bacteria 10809
68 Ga0207705_10209205 3300025909 Bacteria 1479
69 Ga0207707_10092913 3300025912 Unclassified 2636
70 Ga0207695_10000290 3300025913 Bacteria 124821
71 Ga0207695_10073067 3300025913 Bacteria 3496
72 Ga0207695_10099294 3300025913 Bacteria 2909
73 Ga0207671_10126732 3300025914 Bacteria 1956
74 Ga0207671_10169567 3300025914 Bacteria 1694
75 Ga0207663_10045091 3300025916 Bacteria 2710
76 Ga0207657_10054668 3300025919 Bacteria 3451
77 Ga0207646_10000685 3300025922 Bacteria 43841
78 Ga0207646_10038393 3300025922 Bacteria 4314
79 Ga0207694_10050962 3300025924 Bacteria 3208
80 Ga0207700_10168165 3300025928 Bacteria 1827
81 Ga0207644_10241038 3300025931 Unclassified 1440
82 Ga0207690_10009352 3300025932 Bacteria 5821
83 Ga0207670_10002279 3300025936 Bacteria 10050
84 Ga0207670_10030355 3300025936 Bacteria 3454
85 Ga0207691_10067846 3300025940 Bacteria 3224
86 Ga0207691_10069397 3300025940 Unclassified 3183
87 Ga0207667_10080555 3300025949 Bacteria 3374
88 Ga0207667_10124386 3300025949 Bacteria 2657
89 Ga0207667_10161114 3300025949 Bacteria 2307
90 Ga0207712_10008518 3300025961 Bacteria 6483
91 Ga0207668_10007703 3300025972 Bacteria 6407
92 Ga0207668_10133311 3300025972 Bacteria 1900
93 Ga0207658_10004328 3300025986 Bacteria 9881
94 Ga0207703_10153207 3300026035 Bacteria 2012
95 Ga0207639_10201023 3300026041 Bacteria 1709
96 Ga0207702_10014574 3300026078 Bacteria 6524
97 Ga0207641_10012487 3300026088 Bacteria 6962
98 Ga0207674_10108682 3300026116 Bacteria 2750
99 Ga0207674_10397033 3300026116 Bacteria 1333
100 Ga0207674_10536772 3300026116 Unclassified 1130
101 Ga0207428_10167496 3300027907 Bacteria 1665
102 Ga0268265_10031189 3300028380 Bacteria 3847
103 Ga0268264_10012631 3300028381 Bacteria 6956
104 Ga0265337_1000677 3300028556 Bacteria 18019
105 Ga0265337_1033647 3300028556 Bacteria 1511
106 Ga0265326_10005409 3300028558 Bacteria 4024
107 Ga0265319_1000126 3300028563 Bacteria 56938
108 Ga0265319_1016943 3300028563 Bacteria 2784
109 Ga0265323_10037803 3300028653 Bacteria 1767
110 Ga0265338_10000009 3300028800 Bacteria 448611
111 Ga0265338_10000016 3300028800 Bacteria 347424
112 Ga0265338_10000309 3300028800 Bacteria 88345
113 Ga0265338_10002878 3300028800 Bacteria 25114
114 Ga0265338_10008878 3300028800 Bacteria 12117
115 Ga0265338_10014899 3300028800 Bacteria 8598
116 Ga0265338_10029819 3300028800 Bacteria 5398
117 Ga0265338_10055010 3300028800 Bacteria 3544
118 Ga0265338_10096338 3300028800 Unclassified 2428
119 Ga0265338_10101719 3300028800 Bacteria 2339
120 Ga0265338_10178017 3300028800 Unclassified 1624
121 Ga0265338_10182824 3300028800 Unclassified 1596
122 Ga0265338_10251423 3300028800 Bacteria 1304
123 Ga0265324_10001416 3300029957 Bacteria 13781
124 Ga0265324_10001805 3300029957 Bacteria 11634
125 Ga0265324_10016234 3300029957 Bacteria 2723
126 Ga0265324_10017001 3300029957 Bacteria 2647
127 Ga0265320_10012850 3300031240 Bacteria 4844
128 Ga0265320_10046665 3300031240 Bacteria 2122
129 Ga0265320_10077865 3300031240 Bacteria 1551
130 Ga0265325_10015732 3300031241 Bacteria 4246
131 Ga0265340_10000806 3300031247 Bacteria 17772
132 Ga0265316_10089776 3300031344 Bacteria 2345
133 Ga0265316_10124602 3300031344 Bacteria 1944
134 Ga0265313_10001695 3300031595 Bacteria 20333
135 Ga0265314_10113496 3300031711 Bacteria 1718
136 Ga0265342_10181646 3300031712 Unclassified 1152
137 Ga0373926_0009852 3300035083 Bacteria 3196
138 Ga0373944_0003307 3300035089 Bacteria 4150
139 Ga0373945_0006732 3300035116 Bacteria 3713
140 Ga0373945_0033688 3300035116 Unclassified 1822
141 Ga0373954_0014002 3300035118 Bacteria 3575
142 Ga0373956_0101864 3300035119 Bacteria 1333
143 Ga0373943_0033533 3300035170 Bacteria 2446
144 Ga0373946_0018390 3300035171 Bacteria 2683
145 Ga0373935_0022461 3300035692 Bacteria 3869
146 Ga0373927_0002181 3300035695 Bacteria 14384
147 Ga0373927_0003927 3300035695 Bacteria 10542
148 Ga0373947_0003011 3300035725 Bacteria 10044
149 Ga0373947_0172806 3300035725 Bacteria 1403
150 Ga0373937_0099802 3300036401 Bacteria 2693
151 Ga0373937_0105313 3300036401 Bacteria 2621
152 Ga0373925_0000268 3300037068 Bacteria 54347
153 Ga0373925_0022591 3300037068 Bacteria 4590
154 Ga0373925_0341785 3300037068 Unclassified 1214
155 Ga0451576_0034072 3300045051 Bacteria 5410
156 Ga0451576_0057164 3300045051 Bacteria 4078
157 Ga0451576_0077514 3300045051 Bacteria 3459
158 Ga0451576_0149498 3300045051 Bacteria 2436
159 Ga0451576_0203844 3300045051 Bacteria 2066
160 Ga0451576_0233866 3300045051 Bacteria 1919
161 Ga0495592_0030830 3300046454 Bacteria 4056
162 Ga0495641_0013645 3300046461 Bacteria 4449
163 Ga0495651_0022398 3300046462 Bacteria 4910
164 Ga0495662_0185226 3300046476 Bacteria 1026
165 Ga0495608_0217718 3300046511 Unclassified 1199
166 Ga0495628_0017724 3300046516 Bacteria 5916
167 Ga0495630_0003548 3300046517 Bacteria 10864
168 Ga0495630_0072252 3300046517 Bacteria 2597
169 Ga0495586_0045698 3300046535 Bacteria 2360
170 Ga0495587_0048092 3300046536 Bacteria 2527
171 Ga0495645_0108657 3300046543 Bacteria 1964
172 Ga0495599_0005851 3300046678 Bacteria 7383
173 Ga0495599_0006369 3300046678 Bacteria 7120
174 Ga0495599_0169720 3300046678 Bacteria 1346
175 Ga0495646_0015090 3300046680 Unclassified 4908
176 Ga0495647_0005675 3300046681 Bacteria 4100
177 Ga0495624_0036594 3300046690 Unclassified 3163
178 Ga0495600_0024757 3300046809 Bacteria 3865
179 Ga0495674_0109330 3300047319 Bacteria 2345
180 Ga0495684_0074843 3300047471 Bacteria 2573
181 Ga0496100_0271688 3300048903 Unclassified 1261
182 Ga0496112_0300785 3300048915 Bacteria 1550
183 Ga0496115_0333539 3300048918 Bacteria 1239
184 Ga0501033_0266873 3300049570 Unclassified 1210
185 Ga0501034_0222773 3300049571 Bacteria 1838
186 Ga0501036_0356121 3300049572 Bacteria 1222
187 Ga0501047_0223467 3300049581 Unclassified 1739
188 Ga0501047_0258813 3300049581 Unclassified 1588
189 Ga0501083_0048630 3300049744 Bacteria 2862
190 Ga0501035_0021064 3300049822 Bacteria 5994
191 Ga0501044_0342326 3300049823 Unclassified 1416
192 nmdc:mga09592_320880_c1 3300050508 Unclassified 1342
193 nmdc:mga0qj67_195317_c1 3300050509 Bacteria 1644
194 nmdc:mga08y16_51947_c1 3300050511 Bacteria 4289
195 nmdc:mga0n895_517866_c1 3300050512 Unclassified 1200
196 nmdc:mga0a205_401176_c1 3300050515 Bacteria 1235
197 Ga0495601_0002284 3300053077 Bacteria 10820
198 Ga0500650_0011035 3300053098 Bacteria 3704
199 Ga0495592_0027108
200 rootH2_10001006
201 Ga0065715_10038139
202 Ga0065715_10106194
203 Ga0070683_100151548
204 Ga0070682_100281406
205 Ga0068868_100013363
206 Ga0070689_100003684
207 Ga0070689_100087846
208 Ga0070689_100128673
209 Ga0070671_100310870
210 Ga0070688_100037250
211 Ga0070688_100058315
212 Ga0070713_100174631
213 Ga0070713_100272062
214 Ga0070710_10192285
215 Ga0070711_100184691
216 Ga0070708_100538863
217 Ga0070662_100289400
218 Ga0070706_100373868
219 Ga0070707_100000997
220 Ga0070698_100001319
221 Ga0070699_100027930
222 Ga0070679_100155823
223 Ga0070679_100344817
224 Ga0070697_100191597
225 Ga0070672_100046320
226 Ga0070686_100004330
227 Ga0070704_100122596
228 Ga0068855_100074542
229 Ga0068855_100115914
230 Ga0068855_100178264
231 Ga0068855_100450915
232 Ga0068856_100000160
233 Ga0068856_100059114
234 Ga0068856_100137167
235 Ga0068856_100225173
236 Ga0068852_100284218
237 Ga0068859_100065249
238 Ga0068859_100218322
239 Ga0068859_100359148
240 Ga0068864_100066847
241 Ga0068863_100108305
242 Ga0068863_100122240
243 Ga0068863_100147977
244 Ga0070717_10062085
245 Ga0070717_10097941
246 Ga0097621_100009655
247 Ga0068871_100010845
248 Ga0075430_100140052
249 Ga0075431_100184445
250 Ga0075429_100162756
251 Ga0097620_100065249
252 Ga0097620_100218325
253 Ga0097620_100359171
254 Ga0105240_10000192
255 Ga0105240_10103994
256 Ga0105240_10177361
257 Ga0105240_10185169
258 Ga0111539_10047337
259 Ga0105238_10014935
260 Ga0105239_10051719
261 Ga0157372_10253331
262 Ga0163163_10035136
263 Ga0163163_10347042
264 Ga0157376_10069625
265 Ga0207697_10001999
266 Ga0207705_10209205
267 Ga0207707_10092913
268 Ga0207695_10000290
269 Ga0207695_10073067
270 Ga0207695_10099294
271 Ga0207671_10126732
272 Ga0207671_10169567
273 Ga0207663_10045091
274 Ga0207657_10054668
275 Ga0207646_10000685
276 Ga0207646_10038393
277 Ga0207694_10050962
278 Ga0207700_10168165
279 Ga0207644_10241038
280 Ga0207690_10009352
281 Ga0207670_10002279
282 Ga0207670_10030355
283 Ga0207691_10067846
284 Ga0207691_10069397
285 Ga0207667_10080555
286 Ga0207667_10124386
287 Ga0207667_10161114
288 Ga0207712_10008518
289 Ga0207668_10007703
290 Ga0207668_10133311
291 Ga0207658_10004328
292 Ga0207703_10153207
293 Ga0207639_10201023
294 Ga0207702_10014574
295 Ga0207641_10012487
296 Ga0207674_10108682
297 Ga0207674_10397033
298 Ga0207674_10536772
299 Ga0207428_10167496
300 Ga0268265_10031189
301 Ga0268264_10012631
302 Ga0265337_1000677
303 Ga0265337_1033647
304 Ga0265326_10005409
305 Ga0265319_1000126
306 Ga0265319_1016943
307 Ga0265323_10037803
308 Ga0265338_10000009
309 Ga0265338_10000016
310 Ga0265338_10000309
311 Ga0265338_10002878
312 Ga0265338_10008878
313 Ga0265338_10014899
314 Ga0265338_10029819
315 Ga0265338_10055010
316 Ga0265338_10096338
317 Ga0265338_10101719
318 Ga0265338_10178017
319 Ga0265338_10182824
320 Ga0265338_10251423
321 Ga0265324_10001416
322 Ga0265324_10001805
323 Ga0265324_10016234
324 Ga0265324_10017001
325 Ga0265320_10012850
326 Ga0265320_10046665
327 Ga0265320_10077865
328 Ga0265325_10015732
329 Ga0265340_10000806
330 Ga0265316_10089776
331 Ga0265316_10124602
332 Ga0265313_10001695
333 Ga0265314_10113496
334 Ga0265342_10181646
335 Ga0373926_0009852
336 Ga0373944_0003307
337 Ga0373945_0006732
338 Ga0373945_0033688
339 Ga0373954_0014002
340 Ga0373956_0101864
341 Ga0373943_0033533
342 Ga0373946_0018390
343 Ga0373935_0022461
344 Ga0373927_0002181
345 Ga0373927_0003927
346 Ga0373947_0003011
347 Ga0373947_0172806
348 Ga0373937_0099802
349 Ga0373937_0105313
350 Ga0373925_0000268
351 Ga0373925_0022591
352 Ga0373925_0341785
353 Ga0451576_0034072
354 Ga0451576_0057164
355 Ga0451576_0077514
356 Ga0451576_0149498
357 Ga0451576_0203844
358 Ga0451576_0233866
359 Ga0495592_0030830
360 Ga0495641_0013645
361 Ga0495651_0022398
362 Ga0495662_0185226
363 Ga0495608_0217718
364 Ga0495628_0017724
365 Ga0495630_0003548
366 Ga0495630_0072252
367 Ga0495586_0045698
368 Ga0495587_0048092
369 Ga0495645_0108657
370 Ga0495599_0005851
371 Ga0495599_0006369
372 Ga0495599_0169720
373 Ga0495646_0015090
374 Ga0495647_0005675
375 Ga0495624_0036594
376 Ga0495600_0024757
377 Ga0495674_0109330
378 Ga0495684_0074843
379 Ga0496100_0271688
380 Ga0496112_0300785
381 Ga0496115_0333539
382 Ga0501033_0266873
383 Ga0501034_0222773
384 Ga0501036_0356121
385 Ga0501047_0223467
386 Ga0501047_0258813
387 Ga0501083_0048630
388 Ga0501035_0021064
389 Ga0501044_0342326
390 nmdc:mga09592_320880_c1
391 nmdc:mga0qj67_195317_c1
392 nmdc:mga08y16_51947_c1
393 nmdc:mga0n895_517866_c1
394 nmdc:mga0a205_401176_c1
395 Ga0495601_0002284
396 Ga0500650_0011035

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00676

E1_dh

Dehydrogenase E1 component

54

354

0.93

PF13292

DXP_synthase_N

1-deoxy-D-xylulose-5-phosphate synthase

149

227

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
2j9f-assembly1.cif.gz_C human branched-chain alpha-ketoacid dehydrogenase-decarboxylase e1b 0.9259 17 323
1x7z-assembly1.cif.gz_A-2 crystal structure of the human mitochondrial branched-chain alpha-ketoacid dehydrogenase 0.9216 17 323
1wci-assembly1.cif.gz_A-2 reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch 0.9211 17 323
2bff-assembly1.cif.gz_A-2 reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch 0.9198 17 323
2bfe-assembly1.cif.gz_A-2 reactivity modulation of human branched-chain alpha-ketoacid dehydrogenase by an internal molecular switch 0.9181 17 323
ID Description Score Start End Superfamily
af_Q2FY52_1_330_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9221 7 323 3.40.50.970
1v1rA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.9074 17 323 3.40.50.970
1w85A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8873 1 321 3.40.50.970
2bp7G00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8862 17 336 3.40.50.970
af_B4FGJ4_23_381_3.40.50.970 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.8844 19 324 3.40.50.970
ID Description Score Start End GO Terms
AF-A0A2V6F8E6-F1-model_v4 2-oxoisovalerate dehydrogenase subunit alpha (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) 0.975 30 292 GO:0009083
GO:0016624
AF-A0A2V6F8E6-F1-model_v4 2-oxoisovalerate dehydrogenase subunit alpha (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) 0.9606 30 292 GO:0009083
GO:0016624
AF-A0A3D4EVK2-F1-model_v4 2-oxoisovalerate dehydrogenase subunit alpha (EC 1.2.4.4) (Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain) 0.9594 37 235 GO:0009083
GO:0016624
AF-A0A2M8Q834-F1-model_v4 Pyruvate dehydrogenase 0.9549 151 324 GO:0004739
GO:0006086
AF-A0A4V3M7Z3-F1-model_v4 Pyruvate dehydrogenase (Acetyl-transferring) E1 component subunit alpha 0.9535 154 268 GO:0004739
GO:0006086

Map