F303905
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 198 | 150 | 198 | 293 |
Family's Representative Sequence
| Representative Sequence | 3300005329|Ga0070683_100008420|Ga0070683_1000084204 |
| Length | 334 |
| Sequence | MRSPFAYVSRPRPLQSASPGAAVVYLGSLIAVAFLYSNPIVLLAVGLALVIAGRLAGAHSAVRAALWMGFTLALLIVVVNALVVSRGETVLARLGEWPLFGQVDVTLEAILAGLVLGLRAAVVMVGFAVYSACVDPDRVLRALRPIAHRSALTATLVSRLVPVAAADAARLRGPGAAPVGRASLARRLLAGSLDRAVDVAATLELRGYSLDSRRRAAGATFSGSEGTKKRFTRWVRRGTPQAIGGRRSRFDRRFYAVGLVVLASAIAGKALGADSFSEYPTTEIGSGALTLAVAALIVLSGLAPLRRKSHRRPSELRWVRNTHATEFDRRAPGV |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 2 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 4 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 6 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 10 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 15 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 16 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 17 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 18 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 19 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 25 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 26 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 27 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 28 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 29 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 30 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 31 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 32 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 33 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 34 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 35 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 36 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 37 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 38 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 39 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 40 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 81 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 82 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 83 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 84 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 85 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 86 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 87 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 88 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 89 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 90 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 114 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 115 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 116 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 117 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300047446 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 121 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 122 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 123 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 124 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 125 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 126 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 127 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 128 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 129 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 130 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 131 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 132 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 133 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 134 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 135 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 136 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 138 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 139 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 143 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 145 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 146 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 147 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 148 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 149 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 150 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.55 |
| Nodule | 0 |
| Rhizoplane | 14.65 |
| Rhizosphere | 79.8 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.01 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070683_100000304 | 3300005329 | Bacteria | 33703 |
| 2 | Ga0070683_100008420 | 3300005329 | Bacteria | 8758 |
| 3 | Ga0070683_100033094 | 3300005329 | Bacteria | 4711 |
| 4 | Ga0070677_10000722 | 3300005333 | Bacteria | 11049 |
| 5 | Ga0070680_100158245 | 3300005336 | Bacteria | 1903 |
| 6 | Ga0070682_100000017 | 3300005337 | Bacteria | 235228 |
| 7 | Ga0070691_10000323 | 3300005341 | Bacteria | 16930 |
| 8 | Ga0070669_100080944 | 3300005353 | Bacteria | 2418 |
| 9 | Ga0070674_100000017 | 3300005356 | Bacteria | 90884 |
| 10 | Ga0070674_100000036 | 3300005356 | Bacteria | 60112 |
| 11 | Ga0070673_100018710 | 3300005364 | Bacteria | 4957 |
| 12 | Ga0070688_100078091 | 3300005365 | Bacteria | 2135 |
| 13 | Ga0070667_100094280 | 3300005367 | Bacteria | 2579 |
| 14 | Ga0070713_100000092 | 3300005436 | Bacteria | 57390 |
| 15 | Ga0070713_100050033 | 3300005436 | Bacteria | 3450 |
| 16 | Ga0070710_10189237 | 3300005437 | Bacteria | 1293 |
| 17 | Ga0070681_10039725 | 3300005458 | Bacteria | 4716 |
| 18 | Ga0068867_100000373 | 3300005459 | Bacteria | 29787 |
| 19 | Ga0070685_10068177 | 3300005466 | Bacteria | 2101 |
| 20 | Ga0070679_100000247 | 3300005530 | Bacteria | 45331 |
| 21 | Ga0070684_100019854 | 3300005535 | Bacteria | 5568 |
| 22 | Ga0070684_100022076 | 3300005535 | Bacteria | 5304 |
| 23 | Ga0068853_100000161 | 3300005539 | Bacteria | 45752 |
| 24 | Ga0070693_100001118 | 3300005547 | Bacteria | 12032 |
| 25 | Ga0070665_100000138 | 3300005548 | Bacteria | 136562 |
| 26 | Ga0070664_100005208 | 3300005564 | Bacteria | 10427 |
| 27 | Ga0068854_100244860 | 3300005578 | Bacteria | 1429 |
| 28 | Ga0068856_100002438 | 3300005614 | Bacteria | 19134 |
| 29 | Ga0068856_100013512 | 3300005614 | Bacteria | 7904 |
| 30 | Ga0068864_100000031 | 3300005618 | Bacteria | 215331 |
| 31 | Ga0068866_10000001 | 3300005718 | Bacteria | 519680 |
| 32 | Ga0068866_10000448 | 3300005718 | Bacteria | 19023 |
| 33 | Ga0068861_100121850 | 3300005719 | Bacteria | 2105 |
| 34 | Ga0068863_100000181 | 3300005841 | Bacteria | 67076 |
| 35 | Ga0068863_100070876 | 3300005841 | Bacteria | 3297 |
| 36 | Ga0068858_100000009 | 3300005842 | Bacteria | 237748 |
| 37 | Ga0068858_100000284 | 3300005842 | Bacteria | 54715 |
| 38 | Ga0068860_100002615 | 3300005843 | Bacteria | 18773 |
| 39 | Ga0081539_10001019 | 3300005985 | Bacteria | 51621 |
| 40 | Ga0075365_10050453 | 3300006038 | Bacteria | 2745 |
| 41 | Ga0075365_10051799 | 3300006038 | Bacteria | 2713 |
| 42 | Ga0075363_100136602 | 3300006048 | Bacteria | 1378 |
| 43 | Ga0075363_100146854 | 3300006048 | Unclassified | 1330 |
| 44 | Ga0075364_10088366 | 3300006051 | Bacteria | 2055 |
| 45 | Ga0070715_10000001 | 3300006163 | Bacteria | 693690 |
| 46 | Ga0075428_100018785 | 3300006844 | Bacteria | 7644 |
| 47 | Ga0075431_100110889 | 3300006847 | Bacteria | 2831 |
| 48 | Ga0075433_10000851 | 3300006852 | Bacteria | 21420 |
| 49 | Ga0075433_10008697 | 3300006852 | Bacteria | 8100 |
| 50 | Ga0075429_100274636 | 3300006880 | Bacteria | 1476 |
| 51 | Ga0068865_100000034 | 3300006881 | Bacteria | 84043 |
| 52 | Ga0105245_10000020 | 3300009098 | Bacteria | 181774 |
| 53 | Ga0105247_10000185 | 3300009101 | Bacteria | 60656 |
| 54 | Ga0105243_10039767 | 3300009148 | Bacteria | 3669 |
| 55 | Ga0105242_10000051 | 3300009176 | Bacteria | 79661 |
| 56 | Ga0105242_10041231 | 3300009176 | Bacteria | 3723 |
| 57 | Ga0105238_10000126 | 3300009551 | Bacteria | 83957 |
| 58 | Ga0105249_10095684 | 3300009553 | Bacteria | 2785 |
| 59 | Ga0157371_10009059 | 3300013102 | Bacteria | 7870 |
| 60 | Ga0157370_10044303 | 3300013104 | Bacteria | 4277 |
| 61 | Ga0157374_10005401 | 3300013296 | Bacteria | 10740 |
| 62 | Ga0163161_10000021 | 3300017792 | Bacteria | 208779 |
| 63 | Ga0207682_10000176 | 3300025893 | Bacteria | 29031 |
| 64 | Ga0207692_10079499 | 3300025898 | Bacteria | 1750 |
| 65 | Ga0207642_10000002 | 3300025899 | Bacteria | 658166 |
| 66 | Ga0207642_10000071 | 3300025899 | Bacteria | 28197 |
| 67 | Ga0207710_10000180 | 3300025900 | Bacteria | 63999 |
| 68 | Ga0207685_10000005 | 3300025905 | Bacteria | 289944 |
| 69 | Ga0207652_10000323 | 3300025921 | Bacteria | 49536 |
| 70 | Ga0207681_10107685 | 3300025923 | Bacteria | 2022 |
| 71 | Ga0207694_10000004 | 3300025924 | Bacteria | 967075 |
| 72 | Ga0207687_10000013 | 3300025927 | Bacteria | 299826 |
| 73 | Ga0207700_10000007 | 3300025928 | Bacteria | 345720 |
| 74 | Ga0207700_10025913 | 3300025928 | Bacteria | 4081 |
| 75 | Ga0207686_10000083 | 3300025934 | Bacteria | 79869 |
| 76 | Ga0207709_10021349 | 3300025935 | Bacteria | 3664 |
| 77 | Ga0207669_10000001 | 3300025937 | Bacteria | 377747 |
| 78 | Ga0207669_10000049 | 3300025937 | Bacteria | 60278 |
| 79 | Ga0207704_10000059 | 3300025938 | Bacteria | 76643 |
| 80 | Ga0207661_10000056 | 3300025944 | Bacteria | 85250 |
| 81 | Ga0207661_10033556 | 3300025944 | Bacteria | 3985 |
| 82 | Ga0207679_10007411 | 3300025945 | Bacteria | 6955 |
| 83 | Ga0207651_10000613 | 3300025960 | Bacteria | 15010 |
| 84 | Ga0207712_10187088 | 3300025961 | Bacteria | 1631 |
| 85 | Ga0207668_10083619 | 3300025972 | Bacteria | 2323 |
| 86 | Ga0207640_10223995 | 3300025981 | Bacteria | 1442 |
| 87 | Ga0207658_10088521 | 3300025986 | Bacteria | 2394 |
| 88 | Ga0207703_10000018 | 3300026035 | Bacteria | 271377 |
| 89 | Ga0207703_10000207 | 3300026035 | Bacteria | 68866 |
| 90 | Ga0207639_10000536 | 3300026041 | Bacteria | 26077 |
| 91 | Ga0207702_10008388 | 3300026078 | Bacteria | 8717 |
| 92 | Ga0207702_10010008 | 3300026078 | Bacteria | 7950 |
| 93 | Ga0207641_10000349 | 3300026088 | Bacteria | 55251 |
| 94 | Ga0207641_10059273 | 3300026088 | Bacteria | 3259 |
| 95 | Ga0207648_10000630 | 3300026089 | Bacteria | 39502 |
| 96 | Ga0207676_10000031 | 3300026095 | Bacteria | 215877 |
| 97 | Ga0207683_10041836 | 3300026121 | Bacteria | 4002 |
| 98 | Ga0268266_10000047 | 3300028379 | Bacteria | 310996 |
| 99 | Ga0268264_10016075 | 3300028381 | Bacteria | 6132 |
| 100 | Ga0265319_1000020 | 3300028563 | Bacteria | 153921 |
| 101 | Ga0265338_10000222 | 3300028800 | Bacteria | 105765 |
| 102 | Ga0265320_10096836 | 3300031240 | Bacteria | 1362 |
| 103 | Ga0265325_10010780 | 3300031241 | Bacteria | 5274 |
| 104 | Ga0265331_10024709 | 3300031250 | Bacteria | 3038 |
| 105 | Ga0265316_10152912 | 3300031344 | Bacteria | 1728 |
| 106 | Ga0316575_10128606 | 3300031665 | Bacteria | 1039 |
| 107 | Ga0316574_0114724 | 3300035398 | Bacteria | 1728 |
| 108 | Ga0373937_0145267 | 3300036401 | Bacteria | 2220 |
| 109 | Ga0466963_0000067 | 3300044694 | Bacteria | 35973 |
| 110 | Ga0466963_0119348 | 3300044694 | Bacteria | 1814 |
| 111 | Ga0495592_0286651 | 3300046454 | Unclassified | 1075 |
| 112 | Ga0495603_0000005 | 3300046455 | Bacteria | 75902 |
| 113 | Ga0495603_0005349 | 3300046455 | Bacteria | 7658 |
| 114 | Ga0495629_0001756 | 3300046459 | Bacteria | 17004 |
| 115 | Ga0495629_0077942 | 3300046459 | Bacteria | 2314 |
| 116 | Ga0495638_0016950 | 3300046460 | Bacteria | 4870 |
| 117 | Ga0495641_0000029 | 3300046461 | Bacteria | 97259 |
| 118 | Ga0495641_0042589 | 3300046461 | Bacteria | 2103 |
| 119 | Ga0495653_0048143 | 3300046463 | Bacteria | 3293 |
| 120 | Ga0495582_0000004 | 3300046473 | Bacteria | 168322 |
| 121 | Ga0495662_0000226 | 3300046476 | Bacteria | 23727 |
| 122 | Ga0495606_0000072 | 3300046507 | Bacteria | 173678 |
| 123 | Ga0495608_0000080 | 3300046511 | Bacteria | 71060 |
| 124 | Ga0495618_0179180 | 3300046514 | Bacteria | 1347 |
| 125 | Ga0495620_0001094 | 3300046515 | Bacteria | 16561 |
| 126 | Ga0495628_0000165 | 3300046516 | Bacteria | 57669 |
| 127 | Ga0495628_0002719 | 3300046516 | Bacteria | 15837 |
| 128 | Ga0495630_0012104 | 3300046517 | Bacteria | 6255 |
| 129 | Ga0495644_0001811 | 3300046523 | Bacteria | 8610 |
| 130 | Ga0495640_0022401 | 3300046533 | Bacteria | 4618 |
| 131 | Ga0495633_0058366 | 3300046558 | Bacteria | 1812 |
| 132 | Ga0495635_0000034 | 3300046663 | Bacteria | 96408 |
| 133 | Ga0495588_0000134 | 3300046674 | Bacteria | 117581 |
| 134 | Ga0495647_0000017 | 3300046681 | Bacteria | 83387 |
| 135 | Ga0495658_0000004 | 3300046683 | Bacteria | 173598 |
| 136 | Ga0495658_0062698 | 3300046683 | Bacteria | 2138 |
| 137 | Ga0495669_0000030 | 3300046684 | Bacteria | 102988 |
| 138 | Ga0495613_0000124 | 3300046689 | Bacteria | 75971 |
| 139 | Ga0495624_0000708 | 3300046690 | Bacteria | 26158 |
| 140 | Ga0495649_0004062 | 3300046694 | Bacteria | 9635 |
| 141 | Ga0495604_0000126 | 3300047317 | Bacteria | 63992 |
| 142 | Ga0495676_0000873 | 3300047321 | Bacteria | 25176 |
| 143 | Ga0495676_0002352 | 3300047321 | Bacteria | 16760 |
| 144 | Ga0495680_0000183 | 3300047322 | Bacteria | 66401 |
| 145 | Ga0495680_0000447 | 3300047322 | Bacteria | 46180 |
| 146 | Ga0495679_009048 | 3300047446 | Bacteria | 4012 |
| 147 | Ga0495602_0004840 | 3300048088 | Bacteria | 14087 |
| 148 | Ga0496100_0000005 | 3300048903 | Bacteria | 312112 |
| 149 | Ga0496100_0000010 | 3300048903 | Bacteria | 205204 |
| 150 | Ga0496101_0000022 | 3300048904 | Bacteria | 216728 |
| 151 | Ga0496101_0000025 | 3300048904 | Bacteria | 205204 |
| 152 | Ga0496102_0000115 | 3300048905 | Bacteria | 114224 |
| 153 | Ga0496103_0000008 | 3300048906 | Bacteria | 340474 |
| 154 | Ga0496104_0000004 | 3300048907 | Bacteria | 641830 |
| 155 | Ga0496104_0000009 | 3300048907 | Bacteria | 488055 |
| 156 | Ga0496105_0000001 | 3300048908 | Bacteria | 1328178 |
| 157 | Ga0496105_0000007 | 3300048908 | Bacteria | 339658 |
| 158 | Ga0496105_0037051 | 3300048908 | Bacteria | 4018 |
| 159 | Ga0496106_0000012 | 3300048909 | Bacteria | 205158 |
| 160 | Ga0496106_0001128 | 3300048909 | Bacteria | 19755 |
| 161 | Ga0496107_0000010 | 3300048910 | Bacteria | 205188 |
| 162 | Ga0496107_0000011 | 3300048910 | Bacteria | 201631 |
| 163 | Ga0496108_0000001 | 3300048911 | Bacteria | 919044 |
| 164 | Ga0496108_0000026 | 3300048911 | Bacteria | 172399 |
| 165 | Ga0496108_0008773 | 3300048911 | Bacteria | 8196 |
| 166 | Ga0496108_0106401 | 3300048911 | Bacteria | 2395 |
| 167 | Ga0496109_0000004 | 3300048912 | Bacteria | 404818 |
| 168 | Ga0496109_0000060 | 3300048912 | Bacteria | 115800 |
| 169 | Ga0496109_0004711 | 3300048912 | Bacteria | 11387 |
| 170 | Ga0496110_0017442 | 3300048913 | Bacteria | 6006 |
| 171 | Ga0496110_0144468 | 3300048913 | Bacteria | 2151 |
| 172 | Ga0496110_0246569 | 3300048913 | Bacteria | 1625 |
| 173 | Ga0496111_0000077 | 3300048914 | Bacteria | 40767 |
| 174 | Ga0496114_0000088 | 3300048917 | Bacteria | 65300 |
| 175 | Ga0496114_0103571 | 3300048917 | Bacteria | 2433 |
| 176 | Ga0496115_0000119 | 3300048918 | Bacteria | 71710 |
| 177 | Ga0496119_0073910 | 3300048922 | Bacteria | 1987 |
| 178 | Ga0496120_0138788 | 3300048923 | Bacteria | 1236 |
| 179 | Ga0501032_0094192 | 3300049569 | Bacteria | 1986 |
| 180 | Ga0501034_0002880 | 3300049571 | Bacteria | 20004 |
| 181 | Ga0501034_0021410 | 3300049571 | Bacteria | 6591 |
| 182 | Ga0501042_0011878 | 3300049578 | Bacteria | 5884 |
| 183 | Ga0501047_0446219 | 3300049581 | Bacteria | 1123 |
| 184 | Ga0501075_0005016 | 3300049591 | Bacteria | 9035 |
| 185 | Ga0501076_0037714 | 3300049592 | Bacteria | 3792 |
| 186 | Ga0501081_0139260 | 3300049743 | Bacteria | 1738 |
| 187 | Ga0501044_0039278 | 3300049823 | Bacteria | 4938 |
| 188 | nmdc:mga00v17_138098_c1 | 3300050491 | Bacteria | 1561 |
| 189 | nmdc:mga00v17_82131_c1 | 3300050491 | Unclassified | 2013 |
| 190 | nmdc:mga0yw44_23116_c1 | 3300050492 | Bacteria | 3498 |
| 191 | nmdc:mga0a205_11003_c1 | 3300050515 | Bacteria | 8327 |
| 192 | nmdc:mga0a205_6_c1 | 3300050515 | Bacteria | 129758 |
| 193 | Ga0495601_0000066 | 3300053077 | Bacteria | 56855 |
| 194 | Ga0495601_0207200 | 3300053077 | Bacteria | 1281 |
| 195 | Ga0495612_0000022 | 3300053078 | Bacteria | 119126 |
| 196 | Ga0495612_0000171 | 3300053078 | Bacteria | 27333 |
| 197 | Ga0495595_0000107 | 3300053084 | Bacteria | 38201 |
| 198 | Ga0500614_011192 | 3300053123 | Bacteria | 1938 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046459 | Ga0495629_0001756 | Ga0495629_0001756_12662_13582 | 221 |
| 2 | 3300009176 | Ga0105242_10000051 | Ga0105242_100000513 | 226 |
| 3 | 3300025934 | Ga0207686_10000083 | Ga0207686_1000008388 | 226 |
| 4 | 3300048917 | Ga0496114_0000088 | Ga0496114_0000088_36766_37827 | 226 |
| 5 | 3300048918 | Ga0496115_0000119 | Ga0496115_0000119_33884_34945 | 226 |
| 6 | 3300005356 | Ga0070674_100000036 | Ga0070674_10000003638 | 227 |
| 7 | 3300005718 | Ga0068866_10000448 | Ga0068866_1000044814 | 227 |
| 8 | 3300025899 | Ga0207642_10000071 | Ga0207642_1000007113 | 227 |
| 9 | 3300025937 | Ga0207669_10000049 | Ga0207669_1000004938 | 227 |
| 10 | 3300009176 | Ga0105242_10041231 | Ga0105242_100412312 | 231 |
| 11 | 3300050491 | nmdc:mga00v17_138098_c1 | nmdc:mga00v17_138098_c1_758_1531 | 231 |
| 12 | 3300005842 | Ga0068858_100000284 | Ga0068858_10000028428 | 237 |
| 13 | 3300026035 | Ga0207703_10000018 | Ga0207703_10000018139 | 237 |
| 14 | 3300053078 | Ga0495612_0000171 | Ga0495612_0000171_14123_15094 | 238 |
| 15 | 3300046455 | Ga0495603_0005349 | Ga0495603_0005349_3650_4648 | 240 |
| 16 | 3300005547 | Ga0070693_100001118 | Ga0070693_10000111810 | 242 |
| 17 | 3300005614 | Ga0068856_100002438 | Ga0068856_1000024386 | 244 |
| 18 | 3300026078 | Ga0207702_10008388 | Ga0207702_100083886 | 244 |
| 19 | 3300048907 | Ga0496104_0000004 | Ga0496104_0000004_461459_462427 | 244 |
| 20 | 3300048908 | Ga0496105_0000001 | Ga0496105_0000001_179404_180372 | 244 |
| 21 | 3300048922 | Ga0496119_0073910 | Ga0496119_0073910_686_1654 | 244 |
| 22 | 3300048923 | Ga0496120_0138788 | Ga0496120_0138788_134_1102 | 244 |
| 23 | 3300006852 | Ga0075433_10008697 | Ga0075433_100086978 | 245 |
| 24 | 3300046473 | Ga0495582_0000004 | Ga0495582_0000004_30305_31279 | 245 |
| 25 | 3300046683 | Ga0495658_0000004 | Ga0495658_0000004_108277_109251 | 245 |
| 26 | 3300050515 | nmdc:mga0a205_11003_c1 | nmdc:mga0a205_11003_c1_5662_6633 | 245 |
| 27 | 3300048905 | Ga0496102_0000115 | Ga0496102_0000115_17454_18455 | 246 |
| 28 | 3300048906 | Ga0496103_0000008 | Ga0496103_0000008_24479_25480 | 246 |
| 29 | 3300048911 | Ga0496108_0008773 | Ga0496108_0008773_1700_2674 | 246 |
| 30 | 3300048912 | Ga0496109_0004711 | Ga0496109_0004711_8594_9568 | 246 |
| 31 | 3300048913 | Ga0496110_0017442 | Ga0496110_0017442_4215_5165 | 246 |
| 32 | 3300048913 | Ga0496110_0144468 | Ga0496110_0144468_331_1323 | 246 |
| 33 | 3300048914 | Ga0496111_0000077 | Ga0496111_0000077_38932_39882 | 246 |
| 34 | 3300053077 | Ga0495601_0000066 | Ga0495601_0000066_40634_41584 | 246 |
| 35 | 3300005841 | Ga0068863_100070876 | Ga0068863_1000708763 | 247 |
| 36 | 3300013102 | Ga0157371_10009059 | Ga0157371_100090597 | 247 |
| 37 | 3300026088 | Ga0207641_10059273 | Ga0207641_100592732 | 247 |
| 38 | 3300049591 | Ga0501075_0005016 | Ga0501075_0005016_898_1827 | 247 |
| 39 | 3300005719 | Ga0068861_100121850 | Ga0068861_1001218502 | 248 |
| 40 | 3300006881 | Ga0068865_100000034 | Ga0068865_10000003448 | 248 |
| 41 | 3300025938 | Ga0207704_10000059 | Ga0207704_1000005948 | 248 |
| 42 | 3300028563 | Ga0265319_1000020 | Ga0265319_100002016 | 248 |
| 43 | 3300028800 | Ga0265338_10000222 | Ga0265338_100002226 | 248 |
| 44 | 3300031240 | Ga0265320_10096836 | Ga0265320_100968362 | 248 |
| 45 | 3300031241 | Ga0265325_10010780 | Ga0265325_100107803 | 248 |
| 46 | 3300031250 | Ga0265331_10024709 | Ga0265331_100247093 | 248 |
| 47 | 3300031344 | Ga0265316_10152912 | Ga0265316_101529122 | 248 |
| 48 | 3300013104 | Ga0157370_10044303 | Ga0157370_100443032 | 249 |
| 49 | 3300048088 | Ga0495602_0004840 | Ga0495602_0004840_6114_7076 | 249 |
| 50 | 3300048911 | Ga0496108_0000026 | Ga0496108_0000026_129153_130064 | 249 |
| 51 | 3300048911 | Ga0496108_0106401 | Ga0496108_0106401_844_1827 | 249 |
| 52 | 3300048912 | Ga0496109_0000060 | Ga0496109_0000060_55345_56256 | 249 |
| 53 | 3300005329 | Ga0070683_100033094 | Ga0070683_1000330944 | 250 |
| 54 | 3300005436 | Ga0070713_100000092 | Ga0070713_10000009229 | 250 |
| 55 | 3300005564 | Ga0070664_100005208 | Ga0070664_1000052088 | 250 |
| 56 | 3300025928 | Ga0207700_10000007 | Ga0207700_1000000732 | 250 |
| 57 | 3300025945 | Ga0207679_10007411 | Ga0207679_100074116 | 250 |
| 58 | 3300044694 | Ga0466963_0000067 | Ga0466963_0000067_12285_13301 | 250 |
| 59 | 3300005618 | Ga0068864_100000031 | Ga0068864_100000031210 | 251 |
| 60 | 3300006852 | Ga0075433_10000851 | Ga0075433_1000085120 | 251 |
| 61 | 3300026095 | Ga0207676_10000031 | Ga0207676_10000031209 | 251 |
| 62 | 3300046514 | Ga0495618_0179180 | Ga0495618_0179180_307_1176 | 251 |
| 63 | 3300046516 | Ga0495628_0002719 | Ga0495628_0002719_8603_9589 | 251 |
| 64 | 3300046517 | Ga0495630_0012104 | Ga0495630_0012104_1252_2238 | 251 |
| 65 | 3300047321 | Ga0495676_0002352 | Ga0495676_0002352_4882_5910 | 251 |
| 66 | 3300048903 | Ga0496100_0000005 | Ga0496100_0000005_200460_201488 | 251 |
| 67 | 3300048904 | Ga0496101_0000022 | Ga0496101_0000022_40198_41226 | 251 |
| 68 | 3300048909 | Ga0496106_0001128 | Ga0496106_0001128_18590_19618 | 251 |
| 69 | 3300048910 | Ga0496107_0000011 | Ga0496107_0000011_110395_111423 | 251 |
| 70 | 3300049592 | Ga0501076_0037714 | Ga0501076_0037714_2128_3129 | 251 |
| 71 | 3300050515 | nmdc:mga0a205_6_c1 | nmdc:mga0a205_6_c1_72014_72988 | 251 |
| 72 | 3300053077 | Ga0495601_0207200 | Ga0495601_0207200_198_1067 | 251 |
| 73 | 3300053078 | Ga0495612_0000022 | Ga0495612_0000022_44285_45154 | 251 |
| 74 | 3300005365 | Ga0070688_100078091 | Ga0070688_1000780912 | 252 |
| 75 | 3300005466 | Ga0070685_10068177 | Ga0070685_100681772 | 252 |
| 76 | 3300046459 | Ga0495629_0077942 | Ga0495629_0077942_295_1257 | 252 |
| 77 | 3300046516 | Ga0495628_0000165 | Ga0495628_0000165_9631_10593 | 252 |
| 78 | 3300005614 | Ga0068856_100013512 | Ga0068856_1000135122 | 253 |
| 79 | 3300026078 | Ga0207702_10010008 | Ga0207702_100100082 | 253 |
| 80 | 3300031665 | Ga0316575_10128606 | Ga0316575_101286061 | 253 |
| 81 | 3300046674 | Ga0495588_0000134 | Ga0495588_0000134_115781_116719 | 253 |
| 82 | 3300046690 | Ga0495624_0000708 | Ga0495624_0000708_5328_6254 | 253 |
| 83 | 3300047322 | Ga0495680_0000447 | Ga0495680_0000447_31100_32044 | 253 |
| 84 | 3300048913 | Ga0496110_0246569 | Ga0496110_0246569_266_1228 | 253 |
| 85 | 3300048917 | Ga0496114_0103571 | Ga0496114_0103571_935_1879 | 253 |
| 86 | 3300005356 | Ga0070674_100000017 | Ga0070674_10000001778 | 254 |
| 87 | 3300005436 | Ga0070713_100050033 | Ga0070713_1000500332 | 254 |
| 88 | 3300005578 | Ga0068854_100244860 | Ga0068854_1002448601 | 254 |
| 89 | 3300005718 | Ga0068866_10000001 | Ga0068866_10000001501 | 254 |
| 90 | 3300009551 | Ga0105238_10000126 | Ga0105238_1000012615 | 254 |
| 91 | 3300025899 | Ga0207642_10000002 | Ga0207642_10000002222 | 254 |
| 92 | 3300025924 | Ga0207694_10000004 | Ga0207694_10000004308 | 254 |
| 93 | 3300025928 | Ga0207700_10025913 | Ga0207700_100259133 | 254 |
| 94 | 3300025937 | Ga0207669_10000001 | Ga0207669_10000001320 | 254 |
| 95 | 3300025981 | Ga0207640_10223995 | Ga0207640_102239952 | 254 |
| 96 | 3300046463 | Ga0495653_0048143 | Ga0495653_0048143_567_1520 | 254 |
| 97 | 3300046663 | Ga0495635_0000034 | Ga0495635_0000034_91962_92939 | 254 |
| 98 | 3300046689 | Ga0495613_0000124 | Ga0495613_0000124_20161_21147 | 254 |
| 99 | 3300048908 | Ga0496105_0037051 | Ga0496105_0037051_1233_2213 | 254 |
| 100 | 3300005841 | Ga0068863_100000181 | Ga0068863_10000018118 | 255 |
| 101 | 3300026088 | Ga0207641_10000349 | Ga0207641_1000034939 | 255 |
| 102 | 3300036401 | Ga0373937_0145267 | Ga0373937_0145267_740_1762 | 255 |
| 103 | 3300046454 | Ga0495592_0286651 | Ga0495592_0286651_112_1053 | 255 |
| 104 | 3300046476 | Ga0495662_0000226 | Ga0495662_0000226_21877_22863 | 255 |
| 105 | 3300046515 | Ga0495620_0001094 | Ga0495620_0001094_955_1941 | 255 |
| 106 | 3300044694 | Ga0466963_0119348 | Ga0466963_0119348_31_948 | 256 |
| 107 | 3300046460 | Ga0495638_0016950 | Ga0495638_0016950_2528_3484 | 256 |
| 108 | 3300046683 | Ga0495658_0062698 | Ga0495658_0062698_876_1829 | 256 |
| 109 | 3300005459 | Ga0068867_100000373 | Ga0068867_10000037325 | 257 |
| 110 | 3300009101 | Ga0105247_10000185 | Ga0105247_1000018555 | 257 |
| 111 | 3300009148 | Ga0105243_10039767 | Ga0105243_100397674 | 257 |
| 112 | 3300025900 | Ga0207710_10000180 | Ga0207710_1000018022 | 257 |
| 113 | 3300025935 | Ga0207709_10021349 | Ga0207709_100213494 | 257 |
| 114 | 3300026089 | Ga0207648_10000630 | Ga0207648_1000063019 | 257 |
| 115 | 3300046507 | Ga0495606_0000072 | Ga0495606_0000072_109338_110300 | 257 |
| 116 | 3300006844 | Ga0075428_100018785 | Ga0075428_1000187858 | 258 |
| 117 | 3300006847 | Ga0075431_100110889 | Ga0075431_1001108892 | 258 |
| 118 | 3300006880 | Ga0075429_100274636 | Ga0075429_1002746362 | 258 |
| 119 | 3300009098 | Ga0105245_10000020 | Ga0105245_10000020141 | 258 |
| 120 | 3300013296 | Ga0157374_10005401 | Ga0157374_100054013 | 258 |
| 121 | 3300025927 | Ga0207687_10000013 | Ga0207687_10000013183 | 258 |
| 122 | 3300025972 | Ga0207668_10083619 | Ga0207668_100836192 | 258 |
| 123 | 3300017792 | Ga0163161_10000021 | Ga0163161_10000021134 | 259 |
| 124 | 3300046461 | Ga0495641_0000029 | Ga0495641_0000029_57055_58047 | 259 |
| 125 | 3300046511 | Ga0495608_0000080 | Ga0495608_0000080_33443_34429 | 259 |
| 126 | 3300046523 | Ga0495644_0001811 | Ga0495644_0001811_2136_3050 | 259 |
| 127 | 3300046533 | Ga0495640_0022401 | Ga0495640_0022401_1981_2967 | 259 |
| 128 | 3300046558 | Ga0495633_0058366 | Ga0495633_0058366_222_1124 | 259 |
| 129 | 3300046684 | Ga0495669_0000030 | Ga0495669_0000030_69195_70178 | 259 |
| 130 | 3300053084 | Ga0495595_0000107 | Ga0495595_0000107_19079_20065 | 259 |
| 131 | 3300053123 | Ga0500614_011192 | Ga0500614_011192_71_1063 | 259 |
| 132 | 3300047322 | Ga0495680_0000183 | Ga0495680_0000183_45279_46265 | 260 |
| 133 | 3300048911 | Ga0496108_0000001 | Ga0496108_0000001_805490_806455 | 261 |
| 134 | 3300048912 | Ga0496109_0000004 | Ga0496109_0000004_59301_60266 | 261 |
| 135 | 3300006163 | Ga0070715_10000001 | Ga0070715_10000001489 | 262 |
| 136 | 3300025905 | Ga0207685_10000005 | Ga0207685_10000005242 | 262 |
| 137 | 3300005337 | Ga0070682_100000017 | Ga0070682_100000017133 | 263 |
| 138 | 3300005535 | Ga0070684_100022076 | Ga0070684_1000220765 | 263 |
| 139 | 3300005843 | Ga0068860_100002615 | Ga0068860_10000261519 | 263 |
| 140 | 3300028381 | Ga0268264_10016075 | Ga0268264_100160756 | 263 |
| 141 | 3300046681 | Ga0495647_0000017 | Ga0495647_0000017_20869_21807 | 263 |
| 142 | 3300005341 | Ga0070691_10000323 | Ga0070691_1000032313 | 264 |
| 143 | 3300048903 | Ga0496100_0000010 | Ga0496100_0000010_159639_160634 | 265 |
| 144 | 3300048904 | Ga0496101_0000025 | Ga0496101_0000025_159639_160634 | 265 |
| 145 | 3300048909 | Ga0496106_0000012 | Ga0496106_0000012_44543_45538 | 265 |
| 146 | 3300048910 | Ga0496107_0000010 | Ga0496107_0000010_44555_45550 | 265 |
| 147 | 3300005353 | Ga0070669_100080944 | Ga0070669_1000809442 | 266 |
| 148 | 3300005364 | Ga0070673_100018710 | Ga0070673_1000187102 | 266 |
| 149 | 3300005437 | Ga0070710_10189237 | Ga0070710_101892372 | 266 |
| 150 | 3300025898 | Ga0207692_10079499 | Ga0207692_100794992 | 266 |
| 151 | 3300025923 | Ga0207681_10107685 | Ga0207681_101076852 | 266 |
| 152 | 3300025960 | Ga0207651_10000613 | Ga0207651_100006135 | 266 |
| 153 | 3300049743 | Ga0501081_0139260 | Ga0501081_0139260_517_1494 | 267 |
| 154 | 3300005333 | Ga0070677_10000722 | Ga0070677_100007225 | 268 |
| 155 | 3300005336 | Ga0070680_100158245 | Ga0070680_1001582452 | 268 |
| 156 | 3300005458 | Ga0070681_10039725 | Ga0070681_100397254 | 268 |
| 157 | 3300005530 | Ga0070679_100000247 | Ga0070679_1000002479 | 268 |
| 158 | 3300005548 | Ga0070665_100000138 | Ga0070665_100000138111 | 268 |
| 159 | 3300005842 | Ga0068858_100000009 | Ga0068858_10000000945 | 268 |
| 160 | 3300005985 | Ga0081539_10001019 | Ga0081539_1000101935 | 268 |
| 161 | 3300025893 | Ga0207682_10000176 | Ga0207682_100001765 | 268 |
| 162 | 3300025921 | Ga0207652_10000323 | Ga0207652_1000032348 | 268 |
| 163 | 3300026035 | Ga0207703_10000207 | Ga0207703_1000020727 | 268 |
| 164 | 3300028379 | Ga0268266_10000047 | Ga0268266_1000004745 | 268 |
| 165 | 3300046455 | Ga0495603_0000005 | Ga0495603_0000005_6999_7907 | 268 |
| 166 | 3300046694 | Ga0495649_0004062 | Ga0495649_0004062_3098_4081 | 268 |
| 167 | 3300047446 | Ga0495679_009048 | Ga0495679_009048_1076_2068 | 268 |
| 168 | 3300048907 | Ga0496104_0000009 | Ga0496104_0000009_368113_369099 | 268 |
| 169 | 3300048908 | Ga0496105_0000007 | Ga0496105_0000007_118957_119943 | 268 |
| 170 | 3300049569 | Ga0501032_0094192 | Ga0501032_0094192_294_1184 | 268 |
| 171 | 3300049571 | Ga0501034_0002880 | Ga0501034_0002880_843_1733 | 268 |
| 172 | 3300049571 | Ga0501034_0021410 | Ga0501034_0021410_3193_4083 | 268 |
| 173 | 3300049578 | Ga0501042_0011878 | Ga0501042_0011878_715_1686 | 268 |
| 174 | 3300049581 | Ga0501047_0446219 | Ga0501047_0446219_75_965 | 268 |
| 175 | 3300049823 | Ga0501044_0039278 | Ga0501044_0039278_2297_3187 | 268 |
| 176 | 3300035398 | Ga0316574_0114724 | Ga0316574_0114724_236_1129 | 269 |
| 177 | 3300047317 | Ga0495604_0000126 | Ga0495604_0000126_23742_24725 | 269 |
| 178 | 3300005329 | Ga0070683_100008420 | Ga0070683_1000084204 | 270 |
| 179 | 3300005539 | Ga0068853_100000161 | Ga0068853_1000001612 | 270 |
| 180 | 3300006038 | Ga0075365_10050453 | Ga0075365_100504532 | 270 |
| 181 | 3300006038 | Ga0075365_10051799 | Ga0075365_100517992 | 270 |
| 182 | 3300006048 | Ga0075363_100136602 | Ga0075363_1001366022 | 270 |
| 183 | 3300006048 | Ga0075363_100146854 | Ga0075363_1001468542 | 270 |
| 184 | 3300006051 | Ga0075364_10088366 | Ga0075364_100883662 | 270 |
| 185 | 3300009553 | Ga0105249_10095684 | Ga0105249_100956843 | 270 |
| 186 | 3300025944 | Ga0207661_10033556 | Ga0207661_100335562 | 270 |
| 187 | 3300025961 | Ga0207712_10187088 | Ga0207712_101870882 | 270 |
| 188 | 3300026041 | Ga0207639_10000536 | Ga0207639_100005363 | 270 |
| 189 | 3300047321 | Ga0495676_0000873 | Ga0495676_0000873_5911_6921 | 270 |
| 190 | 3300050491 | nmdc:mga00v17_82131_c1 | nmdc:mga00v17_82131_c1_629_1525 | 270 |
| 191 | 3300050492 | nmdc:mga0yw44_23116_c1 | nmdc:mga0yw44_23116_c1_446_1342 | 270 |
| 192 | 3300005367 | Ga0070667_100094280 | Ga0070667_1000942802 | 271 |
| 193 | 3300025986 | Ga0207658_10088521 | Ga0207658_100885212 | 271 |
| 194 | 3300026121 | Ga0207683_10041836 | Ga0207683_100418362 | 272 |
| 195 | 3300046461 | Ga0495641_0042589 | Ga0495641_0042589_875_1837 | 272 |
| 196 | 3300005329 | Ga0070683_100000304 | Ga0070683_10000030412 | 275 |
| 197 | 3300005535 | Ga0070684_100019854 | Ga0070684_1000198543 | 275 |
| 198 | 3300025944 | Ga0207661_10000056 | Ga0207661_1000005669 | 275 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6zg3-assembly2.cif.gz_D | the structure of ecf pant transporter in a complex with a nanobody | 0.5024 | 7 | 225 |
| 5x41-assembly1.cif.gz_Q | 3.5a resolution structure of a cobalt energy-coupling factor transporter using lcp method-cbimqo | 0.4966 | 21 | 222 |
| 5x3x-assembly2.cif.gz_q | 2.8a resolution structure of a cobalt energy-coupling factor transporter-cbimqo | 0.4819 | 15 | 220 |
| 8bmq-assembly1.cif.gz_D | cryo-em structure of the folate-specific ecf transporter complex in msp2n2 lipid nanodiscs bound to amp-pnp | 0.4505 | 7 | 221 |
| 6zg3-assembly2.cif.gz_D | the structure of ecf pant transporter in a complex with a nanobody | 0.4384 | 7 | 225 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_E9PVR6_14_304_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.2428 | 14 | 260 | 1.20.1070.10 |
| af_Q5BL33_19_225_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.2318 | 49 | 249 | 1.20.1070.10 |
| af_E9PVR6_14_304_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.2283 | 14 | 260 | 1.20.1070.10 |
| af_Q59X41_293_496_1.20.1250.20 | Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains | 0.2271 | 14 | 272 | 1.20.1250.20 |
| af_Q5BL33_19_225_1.20.1070.10 | Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins | 0.2196 | 49 | 249 | 1.20.1070.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1Q7X7P7-F1-model_v4 | Cobalt transporter | 0.7046 | 1 | 270 |
GO:0005886
|
| AF-A0A1Q7X7P7-F1-model_v4 | Cobalt transporter | 0.6929 | 1 | 270 |
GO:0005886
|
| AF-A0A537W804-F1-model_v4 | Energy-coupling factor transporter transmembrane protein EcfT | 0.6712 | 2 | 259 |
GO:0005886
|
| AF-A0A537YVS9-F1-model_v4 | Energy-coupling factor transporter transmembrane protein EcfT | 0.6637 | 1 | 274 |
GO:0005886
|
| AF-A0A538L6N5-F1-model_v4 | Energy-coupling factor transporter transmembrane protein EcfT | 0.6634 | 1 | 271 |
GO:0005886
|
Predicted Structure (AlphaFold2)
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