F303694

General Info

Members Datasets Scaffolds Average Seq Length
197 115 181 996

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2599185184|2599481197
Length 1048
Sequence SVSIKRPVLATVMSVVIVVFGIIGYKFLGVRDFPSVDPPIISVSTSYSGANADVIESQITEPLEKSINGVPGIRNISSTSSVGQSNITVEFDLDADLETAANDVRDKVGQAQRQLPQDINAPPVVTKADASADQIITLTVSSDTRNINQLDDYAENVLLEGLQTIPGVSTINVQGQRQYAMRLWIDPTKLSALGVTATDIGAALAKENVELPAGKIEGNNTEVTIRALGKLATEKDFNNLIIRADSNRVIRLSDIGYAVLGSANEETIFKESGVPMVGLALVPQPGANYVQIAKDFYTRLEQIKKDLPPDISVKVALDNTRFINQSISEVQETLIVAFVLVVIIIYLFFRDWLIAFRPLIDIPVSLIGAFFIMYIFGFSINILTLLGIVLATGLVVDDGIVVTENIYKKVEAGMAIRKAAFEGSAEIFFAVVSTSVTLAAVFLPIVFLQGFTGRLFREFAVVVAGAVLISAFVSLSLTPMLNVKLIRKNQKKSKFYERTEPFFINMTTSYTESLIKFMKRKWVSFAILAASLVIIGVLVKVIPSELAPLDDRSLLRYSVTGSEGATYEYMTRYMDKVSNLVADSIPEANVNLEIVSPSFGGGGASNTGFGRVGLVGPDERKRTQQELADWLNGKLRKMPDARAIVVQEQTISGGGSGSKTSLPVQYVIQNQDFEKIRKVLPTFFAEVSKSPVFQGTDVNLKFTKPELRVVTDRERARDLGVSVDDIAQTLQLYYSAGRLDYFLINGKQYQVIAQVDRANRDQPLDLKSIYVRSSKGTLVQLDNVVKTSEGATPPAIYHFNRYKSATLSAGLAPGYTVGDGIKEMDRISKSLLDDTFSTALSGPSRDYAEGSSNILFAFGFALLLIYLVLAAQFESFMDPLIVMLTVPLAISGAFLSLWLFNQTLNIFSEIGIITLVGLVTKNGILIVEFANQRMEQGVAKYEAVIEAATARLRPILMTSLAVVLGAVPIAFALGAGAKSRVSLGIVIMGGMLFSLVLTLYIIPMMYLLLAAKTRKDHDHDPEDLAAEAEIAEAARHPHHQEPKLIENL

Samples

Sample ID Description Type Environment
1 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
2 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
5 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
6 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
7 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
8 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
9 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
10 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
11 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
12 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
13 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
14 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
15 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
16 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
17 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
18 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
19 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
20 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
21 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
22 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
24 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
25 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
26 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
27 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
28 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
29 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
30 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
31 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
32 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
33 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
34 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
35 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
36 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
54 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
55 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
57 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
58 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
60 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
76 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
84 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
85 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
92 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
93 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
94 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
95 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
96 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
97 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
98 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
99 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
100 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
101 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
102 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
103 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
104 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
109 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
110 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
111 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
112 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
113 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
114 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
115 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.88
Metatranscriptomes 0
Isolates 8.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.75
Nodule 0
Rhizoplane 1.02
Rhizosphere 71.07
Stem 0
Stem Tuber 0
Unclassified 11.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10003392 3300001989 Bacteria 6081
2 JGI24737J22298_10002668 3300001990 Bacteria 6310
3 JGI24735J21928_10001039 3300002067 Bacteria 9947
4 JGI25162J39368_1000400 3300002737 Bacteria 36323
5 JGI25162J39368_1000883 3300002737 Bacteria 19604
6 JGI25154J39366_1000023 3300002738 Bacteria 219569
7 JGI25157J39369_1002225 3300002741 Bacteria 5284
8 JGI25406J46586_10000387 3300003203 Bacteria 20246
9 JGI25165J46597_1000655 3300003214 Bacteria 28353
10 JGI25153J46596_10004404 3300003215 Bacteria 7602
11 rootH1_10055258 3300003316 Bacteria 10026
12 rootH2_10001836 3300003320 Bacteria 14148
13 rootH2_10121494 3300003320 Bacteria 6039
14 rootL2_10045919 3300003322 Bacteria 4188
15 rootH1_10004576 3300003323 Bacteria 68064
16 JGI25160J50197_1003838 3300003354 Bacteria 6602
17 Ga0055535_1003903 3300003761 Bacteria 3914
18 Ga0055530_10000118 3300003791 Bacteria 68596
19 Ga0065165_1000027 3300005262 Bacteria 228507
20 Ga0070682_100000115 3300005337 Bacteria 71292
21 Ga0070691_10004336 3300005341 Bacteria 6445
22 Ga0070674_100021091 3300005356 Bacteria 4177
23 Ga0070659_100001784 3300005366 Bacteria 15474
24 Ga0070665_100000031 3300005548 Bacteria 333365
25 Ga0068855_100007659 3300005563 Bacteria 13058
26 Ga0068857_100008375 3300005577 Bacteria 8936
27 Ga0068859_100028944 3300005617 Bacteria 5558
28 Ga0068860_100000072 3300005843 Bacteria 174997
29 Ga0068860_100009845 3300005843 Bacteria 9484
30 Ga0081539_10000042 3300005985 Bacteria 289955
31 Ga0075366_10000038 3300006195 Bacteria 46485
32 Ga0075366_10000672 3300006195 Bacteria 16138
33 Ga0075366_10013033 3300006195 Bacteria 4727
34 Ga0097620_100028943 3300006931 Bacteria 5558
35 Ga0105240_10004078 3300009093 Bacteria 22471
36 Ga0105240_10009728 3300009093 Bacteria 13578
37 Ga0105240_10012046 3300009093 Bacteria 11985
38 Ga0105237_10002351 3300009545 Bacteria 23515
39 Ga0105237_10002466 3300009545 Bacteria 22965
40 Ga0105237_10003470 3300009545 Bacteria 18692
41 Ga0105237_10008358 3300009545 Bacteria 11222
42 Ga0105237_10010174 3300009545 Bacteria 10024
43 Ga0105237_10026960 3300009545 Bacteria 5869
44 Ga0105237_10048613 3300009545 Bacteria 4264
45 Ga0105237_10062031 3300009545 Bacteria 3737
46 Ga0105239_10000009 3300010375 Bacteria 361182
47 Ga0105239_10000015 3300010375 Bacteria 319892
48 Ga0105239_10000101 3300010375 Bacteria 119610
49 Ga0105239_10001186 3300010375 Bacteria 35727
50 Ga0105239_10001330 3300010375 Bacteria 33265
51 Ga0105239_10002537 3300010375 Bacteria 23170
52 Ga0105239_10010210 3300010375 Bacteria 10519
53 Ga0105239_10011303 3300010375 Bacteria 9960
54 Ga0105239_10072402 3300010375 Bacteria 3788
55 Ga0157373_10000040 3300013100 Bacteria 114771
56 Ga0157371_10000229 3300013102 Bacteria 81458
57 Ga0157370_10020796 3300013104 Bacteria 6548
58 Ga0157370_10022084 3300013104 Bacteria 6337
59 Ga0163162_10000167 3300013306 Bacteria 60620
60 Ga0157372_10001423 3300013307 Bacteria 25825
61 Ga0157372_10002240 3300013307 Bacteria 20997
62 Ga0157372_10008890 3300013307 Bacteria 10669
63 Ga0157372_10013486 3300013307 Bacteria 8735
64 Ga0207427_100215 3300025231 Bacteria 50603
65 Ga0209437_100048 3300025233 Bacteria 405107
66 Ga0209437_100130 3300025233 Bacteria 183731
67 Ga0209258_100036 3300025242 Bacteria 428859
68 Ga0209646_1000004 3300025246 Bacteria 786587
69 Ga0209646_1003144 3300025246 Bacteria 3337
70 Ga0209026_1000095 3300025250 Bacteria 164309
71 Ga0209026_1000292 3300025250 Bacteria 56639
72 Ga0209148_1000139 3300025254 Bacteria 167011
73 Ga0209233_1000029 3300025261 Bacteria 641642
74 Ga0209233_1001497 3300025261 Bacteria 9192
75 Ga0209673_1000078 3300025273 Bacteria 227727
76 Ga0209758_1007319 3300025297 Bacteria 7562
77 Ga0209050_1000097 3300025298 Bacteria 239919
78 Ga0207426_1000541 3300025302 Bacteria 54110
79 Ga0207426_1000890 3300025302 Bacteria 30547
80 Ga0207647_10001231 3300025904 Bacteria 19711
81 Ga0207695_10000327 3300025913 Bacteria 113436
82 Ga0207695_10000952 3300025913 Bacteria 51546
83 Ga0207695_10051310 3300025913 Bacteria 4332
84 Ga0207671_10001600 3300025914 Bacteria 25735
85 Ga0207671_10002289 3300025914 Bacteria 20714
86 Ga0207671_10002415 3300025914 Bacteria 20021
87 Ga0207671_10010566 3300025914 Bacteria 7599
88 Ga0207671_10015955 3300025914 Bacteria 5856
89 Ga0207671_10020136 3300025914 Bacteria 5085
90 Ga0207671_10022903 3300025914 Bacteria 4716
91 Ga0207694_10016908 3300025924 Bacteria 5511
92 Ga0207690_10001337 3300025932 Bacteria 15498
93 Ga0207669_10012495 3300025937 Bacteria 4178
94 Ga0207667_10027503 3300025949 Bacteria 6189
95 Ga0207639_10022165 3300026041 Bacteria 4573
96 Ga0207674_10007429 3300026116 Bacteria 12772
97 Ga0268266_10000088 3300028379 Bacteria 199029
98 Ga0268264_10000201 3300028381 Bacteria 122060
99 Ga0268264_10001002 3300028381 Bacteria 28669
100 Ga0307515_10000528 3300028794 Bacteria 90438
101 Ga0307515_10003943 3300028794 Bacteria 30968
102 Ga0265324_10000028 3300029957 Bacteria 143704
103 Ga0265327_10000228 3300031251 Bacteria 114387
104 Ga0265327_10000415 3300031251 Bacteria 78296
105 Ga0265327_10005940 3300031251 Bacteria 9951
106 Ga0307509_10035156 3300031507 Bacteria 5502
107 Ga0307412_10000022 3300031911 Bacteria 241533
108 Ga0307416_100000003 3300032002 Bacteria 509060
109 Ga0307507_10001000 3300033179 Bacteria 62890
110 Ga0451577_0000044 3300042876 Bacteria 329357
111 Ga0451577_0000135 3300042876 Bacteria 164236
112 Ga0451577_0000143 3300042876 Bacteria 158858
113 Ga0451577_0000232 3300042876 Bacteria 111987
114 Ga0451577_0008973 3300042876 Bacteria 9666
115 Ga0466969_0000050 3300044656 Bacteria 63194
116 Ga0466972_0000001 3300044658 Bacteria 412457
117 Ga0466972_0000052 3300044658 Bacteria 113449
118 Ga0453683_0000022 3300044673 Bacteria 269593
119 Ga0453683_0000105 3300044673 Bacteria 124993
120 Ga0453683_0000109 3300044673 Bacteria 123662
121 Ga0453683_0002157 3300044673 Bacteria 15660
122 Ga0453683_0023179 3300044673 Bacteria 3957
123 Ga0453683_0031489 3300044673 Unclassified 3351
124 Ga0466966_0000294 3300044684 Bacteria 32748
125 Ga0453684_0000038 3300044712 Bacteria 706970
126 Ga0453684_0000283 3300044712 Bacteria 219542
127 Ga0453684_0000311 3300044712 Bacteria 206847
128 Ga0453684_0001081 3300044712 Bacteria 86815
129 Ga0453684_0001151 3300044712 Bacteria 82556
130 Ga0453684_0001843 3300044712 Bacteria 55368
131 Ga0453684_0004074 3300044712 Bacteria 31743
132 Ga0453684_0005218 3300044712 Bacteria 26054
133 Ga0466970_0000486 3300044765 Bacteria 19528
134 Ga0466959_0000034 3300045049 Bacteria 108946
135 Ga0466959_0002154 3300045049 Bacteria 12503
136 Ga0451576_0000047 3300045051 Bacteria 329357
137 Ga0451576_0000306 3300045051 Bacteria 119031
138 Ga0451576_0002389 3300045051 Bacteria 28227
139 Ga0451576_0032151 3300045051 Bacteria 5590
140 Ga0495650_0000095 3300046471 Bacteria 218020
141 Ga0495585_0000057 3300046492 Bacteria 113069
142 Ga0495585_0000313 3300046492 Bacteria 48193
143 Ga0495606_0000009 3300046507 Bacteria 306313
144 Ga0495606_0010022 3300046507 Bacteria 7925
145 Ga0495606_0015301 3300046507 Bacteria 5919
146 Ga0495610_0000783 3300046512 Bacteria 29899
147 Ga0495616_0002230 3300046513 Bacteria 12967
148 Ga0495616_0010629 3300046513 Bacteria 5319
149 Ga0495609_0015412 3300046538 Bacteria 3577
150 Ga0495633_0000074 3300046558 Bacteria 130197
151 Ga0495668_0000017 3300046616 Bacteria 434025
152 Ga0495668_0000564 3300046616 Bacteria 45569
153 Ga0495625_0000007 3300046660 Bacteria 565749
154 Ga0495625_0000679 3300046660 Bacteria 48394
155 Ga0495625_0002491 3300046660 Bacteria 19851
156 Ga0495625_0006036 3300046660 Bacteria 10881
157 Ga0495625_0013511 3300046660 Bacteria 6556
158 Ga0495661_0002273 3300046665 Bacteria 14867
159 Ga0495661_0004927 3300046665 Bacteria 9552
160 Ga0495649_0000007 3300046694 Bacteria 518037
161 Ga0495687_000079 3300047443 Bacteria 147704
162 Ga0495687_000960 3300047443 Bacteria 29594
163 Ga0495686_0000041 3300047472 Bacteria 297599
164 Ga0495686_0000152 3300047472 Bacteria 133713
165 Ga0495686_0001980 3300047472 Bacteria 20316
166 Ga0495686_0002209 3300047472 Bacteria 18899
167 Ga0495686_0016802 3300047472 Bacteria 4950
168 Ga0496115_0007044 3300048918 Bacteria 8260
169 Ga0501034_0019745 3300049571 Bacteria 6888
170 Ga0501046_0000027 3300049580 Bacteria 197037
171 Ga0501047_0013533 3300049581 Bacteria 7737
172 nmdc:mga0k408_50_c1 3300050493 Bacteria 59317
173 nmdc:mga0k408_671_c1 3300050493 Bacteria 13349
174 Ga0500644_0000451 3300053088 Bacteria 18820
175 Ga0500646_0003624 3300053090 Bacteria 3958
176 Ga0500583_0000024 3300053092 Bacteria 110944
177 Ga0500583_0002242 3300053092 Bacteria 5750
178 Ga0500562_000018 3300053108 Bacteria 126890
179 Ga0500618_000011 3300053125 Bacteria 198091
180 Ga0500622_0000876 3300053156 Bacteria 25650
181 Ga0500622_0008006 3300053156 Bacteria 5951

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046538 Ga0495609_0015412 Ga0495609_0015412_829_3528 824
2 3300047472 Ga0495686_0016802 Ga0495686_0016802_1101_3767 832
3 3300013306 Ga0163162_10000167 Ga0163162_100001678 899
4 3300048918 Ga0496115_0007044 Ga0496115_0007044_3817_6777 938
5 3300006195 Ga0075366_10000672 Ga0075366_1000067212 942
6 3300050493 nmdc:mga0k408_671_c1 nmdc:mga0k408_671_c1_2429_5566 942
7 3300042876 Ga0451577_0000143 Ga0451577_0000143_66888_69890 944
8 3300044673 Ga0453683_0002157 Ga0453683_0002157_1728_4730 944
9 3300044712 Ga0453684_0001081 Ga0453684_0001081_16917_19919 944
10 3300045051 Ga0451576_0000306 Ga0451576_0000306_24384_27386 944
11 3300009545 Ga0105237_10048613 Ga0105237_100486132 948
12 3300010375 Ga0105239_10001186 Ga0105239_100011867 948
13 3300046507 Ga0495606_0010022 Ga0495606_0010022_1226_4345 955
14 3300044673 Ga0453683_0000105 Ga0453683_0000105_42072_45101 956
15 3300045051 Ga0451576_0032151 Ga0451576_0032151_545_3574 956
16 3300010375 Ga0105239_10000009 Ga0105239_1000000954 957
17 3300044673 Ga0453683_0023179 Ga0453683_0023179_384_3413 957
18 3300013102 Ga0157371_10000229 Ga0157371_1000022910 959
19 3300013104 Ga0157370_10020796 Ga0157370_100207961 959
20 3300044712 Ga0453684_0004074 Ga0453684_0004074_26772_29801 959
21 3300009545 Ga0105237_10010174 Ga0105237_100101746 961
22 3300046471 Ga0495650_0000095 Ga0495650_0000095_60647_63757 961
23 3300046507 Ga0495606_0000009 Ga0495606_0000009_185878_188988 961
24 3300046512 Ga0495610_0000783 Ga0495610_0000783_10563_13673 961
25 3300046513 Ga0495616_0002230 Ga0495616_0002230_1217_4327 961
26 3300046660 Ga0495625_0000007 Ga0495625_0000007_143318_146428 961
27 3300046694 Ga0495649_0000007 Ga0495649_0000007_288988_292098 961
28 3300047472 Ga0495686_0001980 Ga0495686_0001980_16627_19758 962
29 3300009545 Ga0105237_10062031 Ga0105237_100620313 963
30 3300010375 Ga0105239_10010210 Ga0105239_100102105 963
31 3300046492 Ga0495585_0000057 Ga0495585_0000057_67452_70556 963
32 3300005356 Ga0070674_100021091 Ga0070674_1000210912 964
33 3300025937 Ga0207669_10012495 Ga0207669_100124952 964
34 3300046507 Ga0495606_0015301 Ga0495606_0015301_805_3939 965
35 3300042876 Ga0451577_0000044 Ga0451577_0000044_203248_206277 967
36 3300044673 Ga0453683_0000109 Ga0453683_0000109_112039_115068 967
37 3300044712 Ga0453684_0000283 Ga0453684_0000283_95937_98966 967
38 3300045051 Ga0451576_0000047 Ga0451576_0000047_123081_126110 967
39 3300046665 Ga0495661_0004927 Ga0495661_0004927_4751_7861 967
40 3300046665 Ga0495661_0002273 Ga0495661_0002273_143_3283 968
41 3300002737 JGI25162J39368_1000883 JGI25162J39368_10008838 969
42 3300003214 JGI25165J46597_1000655 JGI25165J46597_100065514 969
43 3300010375 Ga0105239_10002537 Ga0105239_100025377 969
44 3300013307 Ga0157372_10002240 Ga0157372_100022405 969
45 3300025231 Ga0207427_100215 Ga0207427_10021536 969
46 3300025233 Ga0209437_100048 Ga0209437_100048165 969
47 3300025261 Ga0209233_1000029 Ga0209233_1000029212 969
48 3300046660 Ga0495625_0006036 Ga0495625_0006036_5578_8664 969
49 3300047472 Ga0495686_0000152 Ga0495686_0000152_44083_47160 969
50 3300010375 Ga0105239_10072402 Ga0105239_100724022 970
51 3300029957 Ga0265324_10000028 Ga0265324_1000002877 970
52 3300031251 Ga0265327_10000228 Ga0265327_1000022835 970
53 3300031911 Ga0307412_10000022 Ga0307412_1000002234 970
54 3300032002 Ga0307416_100000003 Ga0307416_100000003325 970
55 3300046492 Ga0495585_0000313 Ga0495585_0000313_2315_5395 970
56 3300046513 Ga0495616_0010629 Ga0495616_0010629_538_3618 970
57 3300046558 Ga0495633_0000074 Ga0495633_0000074_59687_62767 970
58 3300046616 Ga0495668_0000017 Ga0495668_0000017_305920_309000 970
59 3300046660 Ga0495625_0000679 Ga0495625_0000679_43543_46623 970
60 3300046660 Ga0495625_0002491 Ga0495625_0002491_15026_18106 970
61 3300049580 Ga0501046_0000027 Ga0501046_0000027_44140_47244 970
62 3300050493 nmdc:mga0k408_50_c1 nmdc:mga0k408_50_c1_23129_26209 970
63 3300053125 Ga0500618_000011 Ga0500618_000011_114079_117159 970
64 3300003323 rootH1_10004576 rootH1_1000457624 971
65 3300042876 Ga0451577_0000232 Ga0451577_0000232_93952_97029 971
66 3300044712 Ga0453684_0005218 Ga0453684_0005218_8019_11096 971
67 3300045051 Ga0451576_0002389 Ga0451576_0002389_10192_13269 971
68 3300025914 Ga0207671_10022903 Ga0207671_100229031 972
69 3300045049 Ga0466959_0002154 Ga0466959_0002154_6389_9397 972
70 3300053108 Ga0500562_000018 Ga0500562_000018_87214_90288 972
71 3300003761 Ga0055535_1003903 Ga0055535_10039032 973
72 3300025242 Ga0209258_100036 Ga0209258_100036218 973
73 3300025254 Ga0209148_1000139 Ga0209148_100013978 973
74 3300025914 Ga0207671_10002289 Ga0207671_1000228915 973
75 3300053088 Ga0500644_0000451 Ga0500644_0000451_10799_13858 973
76 3300042876 Ga0451577_0000135 Ga0451577_0000135_29720_32818 974
77 3300044712 Ga0453684_0000038 Ga0453684_0000038_29723_32821 974
78 3300046660 Ga0495625_0013511 Ga0495625_0013511_2401_5541 974
79 3300053156 Ga0500622_0000876 Ga0500622_0000876_2937_6077 974
80 3300025261 Ga0209233_1001497 Ga0209233_10014976 975
81 3300025904 Ga0207647_10001231 Ga0207647_100012316 975
82 3300009545 Ga0105237_10002351 Ga0105237_100023518 976
83 3300010375 Ga0105239_10000101 Ga0105239_100001018 976
84 3300013307 Ga0157372_10013486 Ga0157372_100134864 976
85 3300025914 Ga0207671_10020136 Ga0207671_100201362 977
86 3300026041 Ga0207639_10022165 Ga0207639_100221652 977
87 3300049571 Ga0501034_0019745 Ga0501034_0019745_306_3416 977
88 iso_pu_bacteria 2588253712 2588446149 977
89 iso_pu_bacteria 2588254257 2590611871 977
90 3300025250 Ga0209026_1000292 Ga0209026_100029235 978
91 3300003322 rootL2_10045919 rootL2_100459192 979
92 3300005617 Ga0068859_100028944 Ga0068859_1000289443 979
93 3300006931 Ga0097620_100028943 Ga0097620_1000289433 979
94 3300031251 Ga0265327_10005940 Ga0265327_100059406 979
95 3300049581 Ga0501047_0013533 Ga0501047_0013533_1575_4646 979
96 3300025914 Ga0207671_10015955 Ga0207671_100159552 980
97 3300044712 Ga0453684_0001843 Ga0453684_0001843_10447_13539 980
98 iso_pu_bacteria 2884791551 2884794998 980
99 iso_pu_bacteria 2946019816 2946020810 980
100 3300010375 Ga0105239_10000015 Ga0105239_10000015194 981
101 3300013100 Ga0157373_10000040 Ga0157373_1000004066 981
102 3300009545 Ga0105237_10008358 Ga0105237_100083584 982
103 3300031507 Ga0307509_10035156 Ga0307509_100351563 982
104 3300044658 Ga0466972_0000001 Ga0466972_0000001_261198_264239 982
105 3300044673 Ga0453683_0031489 Ga0453683_0031489_110_3187 982
106 3300047472 Ga0495686_0002209 Ga0495686_0002209_3717_6821 982
107 3300003316 rootH1_10055258 rootH1_100552587 983
108 3300005366 Ga0070659_100001784 Ga0070659_1000017849 983
109 3300025932 Ga0207690_10001337 Ga0207690_100013377 983
110 3300047443 Ga0495687_000960 Ga0495687_000960_13683_16841 983
111 3300044658 Ga0466972_0000052 Ga0466972_0000052_40397_43459 984
112 iso_pu_bacteria 2911138879 2911141177 984
113 3300002737 JGI25162J39368_1000400 JGI25162J39368_100040028 985
114 3300025233 Ga0209437_100130 Ga0209437_1001308 985
115 3300025914 Ga0207671_10002415 Ga0207671_100024157 985
116 iso_pu_bacteria 2929239360 2929244209 985
117 3300001990 JGI24737J22298_10002668 JGI24737J22298_100026682 986
118 3300002067 JGI24735J21928_10001039 JGI24735J21928_100010394 986
119 3300006195 Ga0075366_10000038 Ga0075366_1000003818 986
120 3300006195 Ga0075366_10013033 Ga0075366_100130332 986
121 3300013307 Ga0157372_10008890 Ga0157372_100088908 986
122 3300028794 Ga0307515_10000528 Ga0307515_1000052824 986
123 3300028794 Ga0307515_10003943 Ga0307515_100039433 986
124 3300033179 Ga0307507_10001000 Ga0307507_1000100033 986
125 iso_pu_bacteria 2919437846 2919439657 986
126 iso_pu_bacteria 2599185184 2599481197 987
127 iso_pu_bacteria 2852623160 2852625968 987
128 iso_pu_bacteria 2884933994 2884935564 987
129 iso_pu_bacteria 2928078545 2928081792 987
130 iso_pu_bacteria 2928147474 2928151819 987
131 iso_pu_bacteria 2932082852 2932087126 987
132 iso_pu_bacteria 2977232053 2977234407 987
133 3300005563 Ga0068855_100007659 Ga0068855_1000076596 988
134 3300009093 Ga0105240_10009728 Ga0105240_100097281 988
135 3300009545 Ga0105237_10026960 Ga0105237_100269601 988
136 3300025913 Ga0207695_10000327 Ga0207695_1000032710 988
137 3300025949 Ga0207667_10027503 Ga0207667_100275033 988
138 3300044656 Ga0466969_0000050 Ga0466969_0000050_49438_52494 988
139 3300044673 Ga0453683_0000022 Ga0453683_0000022_36872_39958 988
140 3300044684 Ga0466966_0000294 Ga0466966_0000294_25227_28283 988
141 3300044712 Ga0453684_0001151 Ga0453684_0001151_45625_48726 988
142 3300045049 Ga0466959_0000034 Ga0466959_0000034_99734_102790 988
143 3300005843 Ga0068860_100009845 Ga0068860_1000098453 989
144 3300028381 Ga0268264_10001002 Ga0268264_1000100210 989
145 3300047472 Ga0495686_0000041 Ga0495686_0000041_186862_189927 989
146 3300053090 Ga0500646_0003624 Ga0500646_0003624_87_3146 989
147 iso_pu_bacteria 2929921140 2929921873 989
148 iso_pu_bacteria 8003151029 8003154060 989
149 3300003203 JGI25406J46586_10000387 JGI25406J46586_100003875 990
150 3300005985 Ga0081539_10000042 Ga0081539_10000042128 990
151 3300025246 Ga0209646_1003144 Ga0209646_10031441 990
152 3300042876 Ga0451577_0008973 Ga0451577_0008973_2955_6029 990
153 3300044712 Ga0453684_0000311 Ga0453684_0000311_129309_132383 990
154 3300046616 Ga0495668_0000564 Ga0495668_0000564_1695_4763 990
155 3300053092 Ga0500583_0000024 Ga0500583_0000024_103291_106377 990
156 3300003320 rootH2_10001836 rootH2_100018366 991
157 3300003320 rootH2_10121494 rootH2_101214942 991
158 3300005337 Ga0070682_100000115 Ga0070682_1000001156 991
159 3300005341 Ga0070691_10004336 Ga0070691_100043362 991
160 3300005548 Ga0070665_100000031 Ga0070665_100000031270 991
161 3300005577 Ga0068857_100008375 Ga0068857_1000083754 991
162 3300005843 Ga0068860_100000072 Ga0068860_10000007217 991
163 3300009093 Ga0105240_10004078 Ga0105240_100040788 991
164 3300009093 Ga0105240_10012046 Ga0105240_100120463 991
165 3300009545 Ga0105237_10002466 Ga0105237_100024665 991
166 3300009545 Ga0105237_10003470 Ga0105237_100034702 991
167 3300010375 Ga0105239_10001330 Ga0105239_1000133016 991
168 3300010375 Ga0105239_10011303 Ga0105239_100113031 991
169 3300013104 Ga0157370_10022084 Ga0157370_100220843 991
170 3300013307 Ga0157372_10001423 Ga0157372_100014238 991
171 3300025913 Ga0207695_10000952 Ga0207695_1000095210 991
172 3300025913 Ga0207695_10051310 Ga0207695_100513102 991
173 3300025914 Ga0207671_10001600 Ga0207671_100016007 991
174 3300025914 Ga0207671_10010566 Ga0207671_100105662 991
175 3300025924 Ga0207694_10016908 Ga0207694_100169083 991
176 3300026116 Ga0207674_10007429 Ga0207674_100074298 991
177 3300028379 Ga0268266_10000088 Ga0268266_10000088162 991
178 3300028381 Ga0268264_10000201 Ga0268264_1000020117 991
179 3300031251 Ga0265327_10000415 Ga0265327_1000041556 991
180 3300047443 Ga0495687_000079 Ga0495687_000079_118956_122021 991
181 3300053092 Ga0500583_0002242 Ga0500583_0002242_1175_4240 991
182 3300053156 Ga0500622_0008006 Ga0500622_0008006_627_3692 991
183 3300001989 JGI24739J22299_10003392 JGI24739J22299_100033923 993
184 3300002738 JGI25154J39366_1000023 JGI25154J39366_1000023147 993
185 3300002741 JGI25157J39369_1002225 JGI25157J39369_10022252 993
186 3300003215 JGI25153J46596_10004404 JGI25153J46596_100044045 993
187 3300003354 JGI25160J50197_1003838 JGI25160J50197_10038382 993
188 3300003791 Ga0055530_10000118 Ga0055530_1000011828 993
189 3300005262 Ga0065165_1000027 Ga0065165_100002770 993
190 3300025246 Ga0209646_1000004 Ga0209646_1000004451 993
191 3300025250 Ga0209026_1000095 Ga0209026_100009559 993
192 3300025273 Ga0209673_1000078 Ga0209673_1000078170 993
193 3300025297 Ga0209758_1007319 Ga0209758_10073194 993
194 3300025298 Ga0209050_1000097 Ga0209050_1000097184 993
195 3300025302 Ga0207426_1000541 Ga0207426_100054138 993
196 3300025302 Ga0207426_1000890 Ga0207426_100089020 993
197 3300044765 Ga0466970_0000486 Ga0466970_0000486_4983_8057 993

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00873

ACR_tran

AcrB/AcrD/AcrF family

1

1010

0.99

PF03176

MMPL

MMPL family

280

506

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5t0o-assembly1.cif.gz_B crystal structure of a membrane protein 0.8903 3 980
5lq3-assembly2.cif.gz_D structures and transport dynamics of the campylobacter jejuni multidrug efflux pump cmeb 0.8882 4 980
7rr6-assembly1.cif.gz_C multidrug efflux pump subunit acrb 0.8878 4 980
4u95-assembly1.cif.gz_C coupling of remote alternating-access transport mechanisms for protons and substrates in the multidrug efflux pump acrb 0.8837 5 980
2v50-assembly1.cif.gz_C the missing part of the bacterial mexab-oprm system: structural determination of the multidrug exporter mexb 0.8815 4 980
ID Description Score Start End Superfamily
af_Q2FVZ5_891_1052_1.20.1640.10 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9778 827 977 1.20.1640.10
af_P38054_46_113_3.30.70.1430 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.9772 46 110 3.30.70.1430
3w9iD05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9684 829 980 1.20.1640.10
4zjlF05 Mainly Alpha;Up-down Bundle;Multidrug efflux transporter AcrB transmembrane fold;Multidrug efflux transporter AcrB transmembrane domain 0.9653 817 980 1.20.1640.10
5t0oC02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Multidrug efflux transporter AcrB pore domain 0.9622 41 132 3.30.70.1430
ID Description Score Start End GO Terms
AF-A0A3B9U354-F1-model_v4 deleted 0.9744 819 980
AF-A0A543KTB1-F1-model_v4 AcrB/AcrD/AcrF family protein 0.9677 833 980 GO:0005886
GO:0042910
AF-A0A2W4NSX9-F1-model_v4 Multidrug transporter AcrB 0.9645 796 980 GO:0005886
GO:0042910
AF-A0A2V7KDI8-F1-model_v4 Acriflavine resistance protein B 0.9645 787 980 GO:0005886
GO:0042910
AF-A0A257SKM1-F1-model_v4 deleted 0.9642 813 980

Feature Viewer

pLDDT pTM Quality
72.97 0.64 Medium
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Predicted Structure (AlphaFold2)

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