F303081
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 197 | 145 | 191 | 505 |
Family's Representative Sequence
| Representative Sequence | 3300021384|Ga0213876_10042856|Ga0213876_100428562 |
| Length | 462 |
| Sequence | VRIEDTDQNRFVEGAEQYIFDTLAWCGLQPDESPAHGGPYAPYRQSERKQNYRKYAEQLVKDGYAYYAFDTTEELEARRKQIPNFQYSHATRMQQQNSLSLDEATAKEKMNGPHVIRIKMPENETVQFTDMIRGEVSFHTSQVDDKVLLKADGMPTYHLAVVVDDYLMKISHAFRGEEWLPSAPVHILLWKWLGWENEMPEWAHLPLILKPDGNGKLSKRDGDRLGFPVFAMDWTDPKTGETTTGFRERGFLPEAFVNLLALLGWNDGTDTELFTLDELVKQFSMSRVHKGGAKFDYEKAKWFNHEWIRRLPASALRPAVSELLQHAGIQLADGNLLDKVIELVKDRCTLLPDFIQQAGFFFQSPAEIDTAAIKPKWDESKNLFFTELVRAYQLCGFWDAAELEKEFKELAAVNKLKPGELMLPLRIMLVGGKFGPGVFDIAGLIGKAETIRRMEHVLGLLV |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886007 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 | Metagenome | Rhizosphere |
| 2 | 2738541283 | Pedobacter sp. OK701 | Isolate | Unclassified |
| 3 | 2738541284 | Pedobacter sp. YR016 | Isolate | Unclassified |
| 4 | 2852627209 | Pedobacter sp. AK017 | Isolate | Rhizosphere |
| 5 | 2896317667 | Sphingobacterium sp. SGR-19 | Isolate | Rhizosphere |
| 6 | 2904780799 | Sphingobacterium sp. 1304 | Isolate | Rhizosphere |
| 7 | 2919177583 | Sphingobacterium sp. 2149 | Isolate | Rhizosphere |
| 8 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 9 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 10 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 11 | 3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 12 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 15 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 16 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 17 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 24 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 28 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 29 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 30 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 31 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 32 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 34 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 35 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 37 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 38 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 39 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 40 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 41 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 42 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 43 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 44 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 45 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 46 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 47 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 60 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 61 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 62 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 92 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 93 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 94 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 95 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 96 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 97 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 98 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 99 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 100 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 101 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 102 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 103 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 108 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 109 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 110 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 111 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 112 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 113 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 114 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 115 | 3300049521 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought | Metagenome | Rhizosphere |
| 116 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 119 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049651 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_A_0_drought | Metagenome | Rhizosphere |
| 125 | 3300049652 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought | Metagenome | Rhizosphere |
| 126 | 3300049661 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control | Metagenome | Rhizosphere |
| 127 | 3300049664 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought | Metagenome | Rhizosphere |
| 128 | 3300049668 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought | Metagenome | Rhizosphere |
| 129 | 3300049674 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought | Metagenome | Rhizosphere |
| 130 | 3300049675 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control | Metagenome | Rhizosphere |
| 131 | 3300049680 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought | Metagenome | Rhizosphere |
| 132 | 3300049682 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought | Metagenome | Rhizosphere |
| 133 | 3300049683 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control | Metagenome | Rhizosphere |
| 134 | 3300049688 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought | Metagenome | Rhizosphere |
| 135 | 3300049690 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought | Metagenome | Rhizosphere |
| 136 | 3300049705 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought | Metagenome | Rhizosphere |
| 137 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300049775 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought | Metagenome | Rhizosphere |
| 139 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 140 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 141 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 142 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 143 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 144 | 3300053727 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere | Metagenome | Endosphere |
| 145 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.95 |
| Metatranscriptomes | 0 |
| Isolates | 3.05 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.05 |
| Nodule | 0 |
| Rhizoplane | 0.51 |
| Rhizosphere | 90.36 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.09 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL2b_contig_3757853 | 2162886007 | Bacteria | 16541 |
| 2 | Ga0065714_10002866 | 3300005288 | Bacteria | 16064 |
| 3 | Ga0065704_10000218 | 3300005289 | Bacteria | 76484 |
| 4 | Ga0065712_10001142 | 3300005290 | Bacteria | 10072 |
| 5 | Ga0065712_10073409 | 3300005290 | Bacteria | 4402 |
| 6 | Ga0065712_10106285 | 3300005290 | Bacteria | 1921 |
| 7 | Ga0065715_10118280 | 3300005293 | Bacteria | 2320 |
| 8 | Ga0070658_10059151 | 3300005327 | Bacteria | 3121 |
| 9 | Ga0070670_100053216 | 3300005331 | Bacteria | 3476 |
| 10 | Ga0070670_100094505 | 3300005331 | Bacteria | 2571 |
| 11 | Ga0070670_100122854 | 3300005331 | Bacteria | 2240 |
| 12 | Ga0068869_100031602 | 3300005334 | Bacteria | 3724 |
| 13 | Ga0068868_100120180 | 3300005338 | Bacteria | 2142 |
| 14 | Ga0070689_100007125 | 3300005340 | Bacteria | 7792 |
| 15 | Ga0070689_100032987 | 3300005340 | Bacteria | 3943 |
| 16 | Ga0070689_100047060 | 3300005340 | Bacteria | 3325 |
| 17 | Ga0070661_100080422 | 3300005344 | Bacteria | 2406 |
| 18 | Ga0070668_100008040 | 3300005347 | Bacteria | 7835 |
| 19 | Ga0070668_100013895 | 3300005347 | Bacteria | 6020 |
| 20 | Ga0070668_100056732 | 3300005347 | Bacteria | 3025 |
| 21 | Ga0070669_100002268 | 3300005353 | Bacteria | 13955 |
| 22 | Ga0070675_100020561 | 3300005354 | Bacteria | 5267 |
| 23 | Ga0070675_100063273 | 3300005354 | Bacteria | 3058 |
| 24 | Ga0070671_100039165 | 3300005355 | Bacteria | 3934 |
| 25 | Ga0070673_100015943 | 3300005364 | Bacteria | 5295 |
| 26 | Ga0070688_100021005 | 3300005365 | Bacteria | 3807 |
| 27 | Ga0070659_100005770 | 3300005366 | Bacteria | 8910 |
| 28 | Ga0070701_10019100 | 3300005438 | Bacteria | 3234 |
| 29 | Ga0070700_100023130 | 3300005441 | Bacteria | 3632 |
| 30 | Ga0068867_100007009 | 3300005459 | Bacteria | 7964 |
| 31 | Ga0070685_10005117 | 3300005466 | Bacteria | 6644 |
| 32 | Ga0070685_10052792 | 3300005466 | Bacteria | 2353 |
| 33 | Ga0070698_100054905 | 3300005471 | Bacteria | 4043 |
| 34 | Ga0070684_100017077 | 3300005535 | Bacteria | 5948 |
| 35 | Ga0068853_100048544 | 3300005539 | Bacteria | 3647 |
| 36 | Ga0070672_100101569 | 3300005543 | Bacteria | 2333 |
| 37 | Ga0070704_100073109 | 3300005549 | Bacteria | 2497 |
| 38 | Ga0068855_100129865 | 3300005563 | Bacteria | 2878 |
| 39 | Ga0070664_100002432 | 3300005564 | Bacteria | 14976 |
| 40 | Ga0070664_100121758 | 3300005564 | Bacteria | 2285 |
| 41 | Ga0068854_100036760 | 3300005578 | Bacteria | 3435 |
| 42 | Ga0068852_100037322 | 3300005616 | Bacteria | 4072 |
| 43 | Ga0068852_100130714 | 3300005616 | Bacteria | 2312 |
| 44 | Ga0068859_100028028 | 3300005617 | Bacteria | 5648 |
| 45 | Ga0068859_100116266 | 3300005617 | Bacteria | 2739 |
| 46 | Ga0068859_100207897 | 3300005617 | Bacteria | 2043 |
| 47 | Ga0068861_100005573 | 3300005719 | Bacteria | 8531 |
| 48 | Ga0068861_100030426 | 3300005719 | Bacteria | 3956 |
| 49 | Ga0068863_100034709 | 3300005841 | Bacteria | 4803 |
| 50 | Ga0068863_100201455 | 3300005841 | Bacteria | 1915 |
| 51 | Ga0068862_100002324 | 3300005844 | Bacteria | 16954 |
| 52 | Ga0075366_10022330 | 3300006195 | Bacteria | 3680 |
| 53 | Ga0075428_100053003 | 3300006844 | Bacteria | 4444 |
| 54 | Ga0075428_100160054 | 3300006844 | Bacteria | 2444 |
| 55 | Ga0075430_100003574 | 3300006846 | Bacteria | 13027 |
| 56 | Ga0075429_100056839 | 3300006880 | Bacteria | 3406 |
| 57 | Ga0068865_100037913 | 3300006881 | Bacteria | 3259 |
| 58 | Ga0068865_100066302 | 3300006881 | Bacteria | 2546 |
| 59 | Ga0097620_100028026 | 3300006931 | Bacteria | 5648 |
| 60 | Ga0097620_100116275 | 3300006931 | Bacteria | 2739 |
| 61 | Ga0097620_100207895 | 3300006931 | Bacteria | 2043 |
| 62 | Ga0111539_10008839 | 3300009094 | Bacteria | 12764 |
| 63 | Ga0105247_10000945 | 3300009101 | Bacteria | 21909 |
| 64 | Ga0105242_10024031 | 3300009176 | Bacteria | 4810 |
| 65 | Ga0105249_10002194 | 3300009553 | Bacteria | 16909 |
| 66 | Ga0105249_10007108 | 3300009553 | Bacteria | 9770 |
| 67 | Ga0105249_10021735 | 3300009553 | Bacteria | 5745 |
| 68 | Ga0105249_10132080 | 3300009553 | Bacteria | 2385 |
| 69 | Ga0157373_10005321 | 3300013100 | Bacteria | 9667 |
| 70 | Ga0157373_10018357 | 3300013100 | Bacteria | 5094 |
| 71 | Ga0157371_10001517 | 3300013102 | Bacteria | 23991 |
| 72 | Ga0157371_10043233 | 3300013102 | Bacteria | 3210 |
| 73 | Ga0157370_10010747 | 3300013104 | Bacteria | 9626 |
| 74 | Ga0157369_10064592 | 3300013105 | Bacteria | 3941 |
| 75 | Ga0163162_10297345 | 3300013306 | Bacteria | 1746 |
| 76 | Ga0163162_10318224 | 3300013306 | Bacteria | 1688 |
| 77 | Ga0157372_10068206 | 3300013307 | Bacteria | 3999 |
| 78 | Ga0157372_10130741 | 3300013307 | Unclassified | 2888 |
| 79 | Ga0157375_10078217 | 3300013308 | Bacteria | 3340 |
| 80 | Ga0157375_10099067 | 3300013308 | Bacteria | 2993 |
| 81 | Ga0157380_10000855 | 3300014326 | Bacteria | 19105 |
| 82 | Ga0157380_10003568 | 3300014326 | Bacteria | 10699 |
| 83 | Ga0182008_10000025 | 3300014497 | Bacteria | 191222 |
| 84 | Ga0213876_10042856 | 3300021384 | Bacteria | 2391 |
| 85 | Ga0207697_10023672 | 3300025315 | Bacteria | 2514 |
| 86 | Ga0207710_10000833 | 3300025900 | Bacteria | 16618 |
| 87 | Ga0207647_10000088 | 3300025904 | Bacteria | 70267 |
| 88 | Ga0207645_10014805 | 3300025907 | Bacteria | 5206 |
| 89 | Ga0207643_10016549 | 3300025908 | Bacteria | 4023 |
| 90 | Ga0207643_10022376 | 3300025908 | Bacteria | 3479 |
| 91 | Ga0207652_10194558 | 3300025921 | Bacteria | 1824 |
| 92 | Ga0207646_10101596 | 3300025922 | Bacteria | 2578 |
| 93 | Ga0207681_10005290 | 3300025923 | Bacteria | 7931 |
| 94 | Ga0207650_10018482 | 3300025925 | Bacteria | 4892 |
| 95 | Ga0207659_10009382 | 3300025926 | Bacteria | 6111 |
| 96 | Ga0207659_10011438 | 3300025926 | Bacteria | 5607 |
| 97 | Ga0207644_10037932 | 3300025931 | Bacteria | 3392 |
| 98 | Ga0207686_10092542 | 3300025934 | Bacteria | 1999 |
| 99 | Ga0207670_10005967 | 3300025936 | Bacteria | 6726 |
| 100 | Ga0207670_10008154 | 3300025936 | Bacteria | 5896 |
| 101 | Ga0207670_10070385 | 3300025936 | Bacteria | 2416 |
| 102 | Ga0207691_10014699 | 3300025940 | Bacteria | 7461 |
| 103 | Ga0207691_10079702 | 3300025940 | Bacteria | 2947 |
| 104 | Ga0207691_10143753 | 3300025940 | Bacteria | 2101 |
| 105 | Ga0207689_10009792 | 3300025942 | Bacteria | 8258 |
| 106 | Ga0207689_10032372 | 3300025942 | Bacteria | 4351 |
| 107 | Ga0207689_10123861 | 3300025942 | Bacteria | 2126 |
| 108 | Ga0207661_10013332 | 3300025944 | Bacteria | 6004 |
| 109 | Ga0207679_10007372 | 3300025945 | Bacteria | 6974 |
| 110 | Ga0207679_10098946 | 3300025945 | Bacteria | 2276 |
| 111 | Ga0207651_10014151 | 3300025960 | Bacteria | 4597 |
| 112 | Ga0207651_10020452 | 3300025960 | Bacteria | 3995 |
| 113 | Ga0207712_10007732 | 3300025961 | Bacteria | 6797 |
| 114 | Ga0207712_10017873 | 3300025961 | Bacteria | 4613 |
| 115 | Ga0207677_10059130 | 3300026023 | Bacteria | 2642 |
| 116 | Ga0207703_10056188 | 3300026035 | Bacteria | 3205 |
| 117 | Ga0207639_10023774 | 3300026041 | Bacteria | 4427 |
| 118 | Ga0207641_10000275 | 3300026088 | Bacteria | 64649 |
| 119 | Ga0207648_10012521 | 3300026089 | Bacteria | 7939 |
| 120 | Ga0207676_10053714 | 3300026095 | Bacteria | 3154 |
| 121 | Ga0207674_10011159 | 3300026116 | Bacteria | 10102 |
| 122 | Ga0207674_10058449 | 3300026116 | Bacteria | 3906 |
| 123 | Ga0207675_100009364 | 3300026118 | Bacteria | 9180 |
| 124 | Ga0207675_100123855 | 3300026118 | Bacteria | 2448 |
| 125 | Ga0207683_10003276 | 3300026121 | Bacteria | 14111 |
| 126 | Ga0207683_10079813 | 3300026121 | Bacteria | 2902 |
| 127 | Ga0268265_10075995 | 3300028380 | Bacteria | 2633 |
| 128 | Ga0307515_10000001 | 3300028794 | Bacteria | 4259510 |
| 129 | Ga0265327_10000059 | 3300031251 | Bacteria | 236935 |
| 130 | Ga0307406_10055442 | 3300031901 | Bacteria | 2534 |
| 131 | Ga0307406_10153454 | 3300031901 | Bacteria | 1646 |
| 132 | Ga0307412_10000001 | 3300031911 | Bacteria | 822691 |
| 133 | Ga0307414_10000702 | 3300032004 | Bacteria | 17139 |
| 134 | Ga0307414_10001018 | 3300032004 | Bacteria | 14314 |
| 135 | Ga0307414_10001152 | 3300032004 | Bacteria | 13567 |
| 136 | Ga0307414_10005868 | 3300032004 | Bacteria | 6792 |
| 137 | Ga0307414_10129365 | 3300032004 | Bacteria | 1957 |
| 138 | Ga0307414_10136573 | 3300032004 | Bacteria | 1913 |
| 139 | Ga0395905_0012891 | 3300037471 | Bacteria | 8035 |
| 140 | Ga0436365_1397768 | 3300039437 | Bacteria | 16178 |
| 141 | Ga0439439_0012449 | 3300041406 | Bacteria | 2057 |
| 142 | Ga0439465_0026279 | 3300041413 | Bacteria | 1841 |
| 143 | Ga0439449_0008664 | 3300042007 | Bacteria | 3861 |
| 144 | Ga0451577_0005281 | 3300042876 | Bacteria | 13277 |
| 145 | Ga0453683_0025216 | 3300044673 | Bacteria | 3779 |
| 146 | Ga0495621_0021110 | 3300046539 | Bacteria | 2144 |
| 147 | Ga0495674_0146678 | 3300047319 | Bacteria | 1981 |
| 148 | Ga0495672_0013451 | 3300047320 | Bacteria | 5646 |
| 149 | Ga0495686_0020338 | 3300047472 | Bacteria | 4427 |
| 150 | Ga0496115_0032750 | 3300048918 | Bacteria | 4102 |
| 151 | Ga0496116_0002140 | 3300048919 | Bacteria | 21021 |
| 152 | Ga0496117_0001774 | 3300048920 | Bacteria | 29604 |
| 153 | Ga0496118_0080361 | 3300048921 | Bacteria | 2295 |
| 154 | Ga0496122_0003563 | 3300048925 | Bacteria | 20343 |
| 155 | Ga0496123_0021106 | 3300048926 | Bacteria | 5072 |
| 156 | Ga0496124_0037110 | 3300048927 | Bacteria | 4242 |
| 157 | Ga0496125_0071001 | 3300048928 | Bacteria | 2723 |
| 158 | Ga0501298_000925 | 3300049521 | Bacteria | 4153 |
| 159 | Ga0501032_0005855 | 3300049569 | Bacteria | 9093 |
| 160 | Ga0501034_0000002 | 3300049571 | Bacteria | 565510 |
| 161 | Ga0501036_0042514 | 3300049572 | Bacteria | 3847 |
| 162 | Ga0501036_0092418 | 3300049572 | Bacteria | 2556 |
| 163 | Ga0501039_0132707 | 3300049575 | Bacteria | 1954 |
| 164 | Ga0501043_0128146 | 3300049579 | Bacteria | 1989 |
| 165 | Ga0501046_0037362 | 3300049580 | Bacteria | 3902 |
| 166 | Ga0501047_0123586 | 3300049581 | Bacteria | 2468 |
| 167 | Ga0501074_0019129 | 3300049590 | Bacteria | 4971 |
| 168 | Ga0501201_000028 | 3300049651 | Bacteria | 9325 |
| 169 | Ga0501202_001355 | 3300049652 | Bacteria | 3908 |
| 170 | Ga0501217_000126 | 3300049661 | Bacteria | 10131 |
| 171 | Ga0501224_001329 | 3300049664 | Bacteria | 3268 |
| 172 | Ga0501233_000324 | 3300049668 | Bacteria | 7376 |
| 173 | Ga0501242_000343 | 3300049674 | Bacteria | 3851 |
| 174 | Ga0501243_000875 | 3300049675 | Bacteria | 4203 |
| 175 | Ga0501243_007250 | 3300049675 | Bacteria | 1693 |
| 176 | Ga0501250_001067 | 3300049680 | Bacteria | 2129 |
| 177 | Ga0501252_000253 | 3300049682 | Bacteria | 3688 |
| 178 | Ga0501253_000585 | 3300049683 | Bacteria | 3210 |
| 179 | Ga0501259_003011 | 3300049688 | Bacteria | 2697 |
| 180 | Ga0501261_000246 | 3300049690 | Bacteria | 7454 |
| 181 | Ga0501225_0007432 | 3300049705 | Bacteria | 3173 |
| 182 | Ga0501225_0007460 | 3300049705 | Bacteria | 3166 |
| 183 | Ga0501080_0208690 | 3300049742 | Bacteria | 1791 |
| 184 | Ga0501279_003153 | 3300049775 | Bacteria | 2146 |
| 185 | Ga0501035_0080971 | 3300049822 | Bacteria | 2866 |
| 186 | nmdc:mga0k408_34093_c1 | 3300050493 | Bacteria | 2913 |
| 187 | nmdc:mga08y16_2798_c1 | 3300050511 | Bacteria | 17889 |
| 188 | Ga0500651_0008070 | 3300053093 | Bacteria | 6167 |
| 189 | Ga0500568_0000394 | 3300053139 | Bacteria | 33349 |
| 190 | Ga0500611_000004 | 3300053727 | Bacteria | 253326 |
| 191 | Ga0500645_026108 | 3300053730 | Bacteria | 1778 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300026118 | Ga0207675_100123855 | Ga0207675_1001238552 | 441 |
| 2 | 3300031901 | Ga0307406_10153454 | Ga0307406_101534541 | 443 |
| 3 | 3300049580 | Ga0501046_0037362 | Ga0501046_0037362_24_1391 | 448 |
| 4 | 3300049581 | Ga0501047_0123586 | Ga0501047_0123586_24_1391 | 448 |
| 5 | 3300021384 | Ga0213876_10042856 | Ga0213876_100428562 | 460 |
| 6 | 3300005543 | Ga0070672_100101569 | Ga0070672_1001015691 | 474 |
| 7 | 3300005719 | Ga0068861_100030426 | Ga0068861_1000304264 | 474 |
| 8 | 3300025315 | Ga0207697_10023672 | Ga0207697_100236722 | 474 |
| 9 | 3300025908 | Ga0207643_10016549 | Ga0207643_100165492 | 474 |
| 10 | 3300025936 | Ga0207670_10070385 | Ga0207670_100703851 | 474 |
| 11 | 3300013102 | Ga0157371_10043233 | Ga0157371_100432332 | 477 |
| 12 | 3300013105 | Ga0157369_10064592 | Ga0157369_100645922 | 477 |
| 13 | 3300049571 | Ga0501034_0000002 | Ga0501034_0000002_142333_143805 | 479 |
| 14 | 3300049683 | Ga0501253_000585 | Ga0501253_000585_971_2503 | 480 |
| 15 | 3300006881 | Ga0068865_100066302 | Ga0068865_1000663022 | 481 |
| 16 | 3300041413 | Ga0439465_0026279 | Ga0439465_0026279_333_1808 | 484 |
| 17 | 3300049688 | Ga0501259_003011 | Ga0501259_003011_980_2497 | 485 |
| 18 | 3300026116 | Ga0207674_10058449 | Ga0207674_100584493 | 486 |
| 19 | 3300047472 | Ga0495686_0020338 | Ga0495686_0020338_1155_2684 | 490 |
| 20 | 3300049661 | Ga0501217_000126 | Ga0501217_000126_140_1672 | 490 |
| 21 | 3300049664 | Ga0501224_001329 | Ga0501224_001329_1341_2873 | 490 |
| 22 | 3300049668 | Ga0501233_000324 | Ga0501233_000324_1058_2590 | 490 |
| 23 | 3300049682 | Ga0501252_000253 | Ga0501252_000253_1807_3339 | 490 |
| 24 | 3300049705 | Ga0501225_0007460 | Ga0501225_0007460_239_1771 | 490 |
| 25 | 3300049775 | Ga0501279_003153 | Ga0501279_003153_597_2129 | 490 |
| 26 | 3300006844 | Ga0075428_100160054 | Ga0075428_1001600542 | 492 |
| 27 | 3300005539 | Ga0068853_100048544 | Ga0068853_1000485443 | 493 |
| 28 | 3300026041 | Ga0207639_10023774 | Ga0207639_100237744 | 493 |
| 29 | 3300005617 | Ga0068859_100207897 | Ga0068859_1002078972 | 498 |
| 30 | 3300005719 | Ga0068861_100005573 | Ga0068861_1000055737 | 498 |
| 31 | 3300006931 | Ga0097620_100207895 | Ga0097620_1002078952 | 498 |
| 32 | 3300013104 | Ga0157370_10010747 | Ga0157370_100107471 | 498 |
| 33 | 3300026118 | Ga0207675_100009364 | Ga0207675_1000093647 | 498 |
| 34 | 3300031251 | Ga0265327_10000059 | Ga0265327_1000005922 | 498 |
| 35 | iso_pu_bacteria | 2738541283 | 2738755830 | 498 |
| 36 | iso_pu_bacteria | 2738541284 | 2738761504 | 498 |
| 37 | iso_pu_bacteria | 2852627209 | 2852628067 | 498 |
| 38 | 3300005331 | Ga0070670_100053216 | Ga0070670_1000532163 | 499 |
| 39 | 3300005334 | Ga0068869_100031602 | Ga0068869_1000316023 | 499 |
| 40 | 3300005340 | Ga0070689_100032987 | Ga0070689_1000329873 | 499 |
| 41 | 3300005347 | Ga0070668_100013895 | Ga0070668_1000138955 | 499 |
| 42 | 3300005347 | Ga0070668_100056732 | Ga0070668_1000567322 | 499 |
| 43 | 3300005353 | Ga0070669_100002268 | Ga0070669_1000022684 | 499 |
| 44 | 3300005354 | Ga0070675_100063273 | Ga0070675_1000632732 | 499 |
| 45 | 3300005365 | Ga0070688_100021005 | Ga0070688_1000210054 | 499 |
| 46 | 3300005438 | Ga0070701_10019100 | Ga0070701_100191001 | 499 |
| 47 | 3300005441 | Ga0070700_100023130 | Ga0070700_1000231301 | 499 |
| 48 | 3300005578 | Ga0068854_100036760 | Ga0068854_1000367603 | 499 |
| 49 | 3300005617 | Ga0068859_100028028 | Ga0068859_1000280284 | 499 |
| 50 | 3300005841 | Ga0068863_100201455 | Ga0068863_1002014551 | 499 |
| 51 | 3300005844 | Ga0068862_100002324 | Ga0068862_1000023244 | 499 |
| 52 | 3300006195 | Ga0075366_10022330 | Ga0075366_100223302 | 499 |
| 53 | 3300006844 | Ga0075428_100053003 | Ga0075428_1000530032 | 499 |
| 54 | 3300006846 | Ga0075430_100003574 | Ga0075430_1000035748 | 499 |
| 55 | 3300006880 | Ga0075429_100056839 | Ga0075429_1000568393 | 499 |
| 56 | 3300006931 | Ga0097620_100028026 | Ga0097620_1000280265 | 499 |
| 57 | 3300009094 | Ga0111539_10008839 | Ga0111539_100088398 | 499 |
| 58 | 3300009553 | Ga0105249_10021735 | Ga0105249_100217355 | 499 |
| 59 | 3300013307 | Ga0157372_10068206 | Ga0157372_100682062 | 499 |
| 60 | 3300013308 | Ga0157375_10078217 | Ga0157375_100782172 | 499 |
| 61 | 3300014326 | Ga0157380_10003568 | Ga0157380_100035688 | 499 |
| 62 | 3300025907 | Ga0207645_10014805 | Ga0207645_100148052 | 499 |
| 63 | 3300025923 | Ga0207681_10005290 | Ga0207681_100052907 | 499 |
| 64 | 3300025926 | Ga0207659_10011438 | Ga0207659_100114384 | 499 |
| 65 | 3300025934 | Ga0207686_10092542 | Ga0207686_100925422 | 499 |
| 66 | 3300025940 | Ga0207691_10014699 | Ga0207691_100146996 | 499 |
| 67 | 3300025942 | Ga0207689_10009792 | Ga0207689_100097925 | 499 |
| 68 | 3300025942 | Ga0207689_10123861 | Ga0207689_101238612 | 499 |
| 69 | 3300026116 | Ga0207674_10011159 | Ga0207674_100111598 | 499 |
| 70 | 3300026121 | Ga0207683_10003276 | Ga0207683_100032764 | 499 |
| 71 | 3300028380 | Ga0268265_10075995 | Ga0268265_100759951 | 499 |
| 72 | 3300028794 | Ga0307515_10000001 | Ga0307515_100000011925 | 499 |
| 73 | 3300049569 | Ga0501032_0005855 | Ga0501032_0005855_951_2471 | 499 |
| 74 | 3300049590 | Ga0501074_0019129 | Ga0501074_0019129_3189_4709 | 499 |
| 75 | 3300049822 | Ga0501035_0080971 | Ga0501035_0080971_1216_2736 | 499 |
| 76 | 3300050493 | nmdc:mga0k408_34093_c1 | nmdc:mga0k408_34093_c1_1217_2743 | 499 |
| 77 | 3300050511 | nmdc:mga08y16_2798_c1 | nmdc:mga08y16_2798_c1_671_2191 | 499 |
| 78 | iso_pu_bacteria | 2904780799 | 2904783574 | 499 |
| 79 | iso_pu_bacteria | 2919177583 | 2919181436 | 499 |
| 80 | 3300005290 | Ga0065712_10001142 | Ga0065712_100011428 | 500 |
| 81 | 3300005290 | Ga0065712_10073409 | Ga0065712_100734093 | 500 |
| 82 | 3300005290 | Ga0065712_10106285 | Ga0065712_101062852 | 500 |
| 83 | 3300005293 | Ga0065715_10118280 | Ga0065715_101182802 | 500 |
| 84 | 3300005331 | Ga0070670_100094505 | Ga0070670_1000945052 | 500 |
| 85 | 3300005331 | Ga0070670_100122854 | Ga0070670_1001228542 | 500 |
| 86 | 3300005338 | Ga0068868_100120180 | Ga0068868_1001201802 | 500 |
| 87 | 3300005340 | Ga0070689_100007125 | Ga0070689_1000071258 | 500 |
| 88 | 3300005340 | Ga0070689_100047060 | Ga0070689_1000470603 | 500 |
| 89 | 3300005344 | Ga0070661_100080422 | Ga0070661_1000804222 | 500 |
| 90 | 3300005354 | Ga0070675_100020561 | Ga0070675_1000205615 | 500 |
| 91 | 3300005355 | Ga0070671_100039165 | Ga0070671_1000391653 | 500 |
| 92 | 3300005364 | Ga0070673_100015943 | Ga0070673_1000159435 | 500 |
| 93 | 3300005366 | Ga0070659_100005770 | Ga0070659_1000057702 | 500 |
| 94 | 3300005466 | Ga0070685_10005117 | Ga0070685_100051172 | 500 |
| 95 | 3300005466 | Ga0070685_10052792 | Ga0070685_100527922 | 500 |
| 96 | 3300005471 | Ga0070698_100054905 | Ga0070698_1000549053 | 500 |
| 97 | 3300005535 | Ga0070684_100017077 | Ga0070684_1000170775 | 500 |
| 98 | 3300005549 | Ga0070704_100073109 | Ga0070704_1000731092 | 500 |
| 99 | 3300005563 | Ga0068855_100129865 | Ga0068855_1001298652 | 500 |
| 100 | 3300005564 | Ga0070664_100002432 | Ga0070664_10000243212 | 500 |
| 101 | 3300005616 | Ga0068852_100037322 | Ga0068852_1000373223 | 500 |
| 102 | 3300005617 | Ga0068859_100116266 | Ga0068859_1001162662 | 500 |
| 103 | 3300005841 | Ga0068863_100034709 | Ga0068863_1000347092 | 500 |
| 104 | 3300006881 | Ga0068865_100037913 | Ga0068865_1000379132 | 500 |
| 105 | 3300006931 | Ga0097620_100116275 | Ga0097620_1001162752 | 500 |
| 106 | 3300009553 | Ga0105249_10007108 | Ga0105249_100071083 | 500 |
| 107 | 3300009553 | Ga0105249_10132080 | Ga0105249_101320802 | 500 |
| 108 | 3300013306 | Ga0163162_10297345 | Ga0163162_102973452 | 500 |
| 109 | 3300013306 | Ga0163162_10318224 | Ga0163162_103182241 | 500 |
| 110 | 3300013307 | Ga0157372_10130741 | Ga0157372_101307412 | 500 |
| 111 | 3300014326 | Ga0157380_10000855 | Ga0157380_1000085519 | 500 |
| 112 | 3300025904 | Ga0207647_10000088 | Ga0207647_1000008834 | 500 |
| 113 | 3300025908 | Ga0207643_10022376 | Ga0207643_100223762 | 500 |
| 114 | 3300025922 | Ga0207646_10101596 | Ga0207646_101015962 | 500 |
| 115 | 3300025925 | Ga0207650_10018482 | Ga0207650_100184823 | 500 |
| 116 | 3300025926 | Ga0207659_10009382 | Ga0207659_100093824 | 500 |
| 117 | 3300025931 | Ga0207644_10037932 | Ga0207644_100379322 | 500 |
| 118 | 3300025936 | Ga0207670_10005967 | Ga0207670_100059677 | 500 |
| 119 | 3300025936 | Ga0207670_10008154 | Ga0207670_100081546 | 500 |
| 120 | 3300025940 | Ga0207691_10079702 | Ga0207691_100797023 | 500 |
| 121 | 3300025944 | Ga0207661_10013332 | Ga0207661_100133324 | 500 |
| 122 | 3300025945 | Ga0207679_10007372 | Ga0207679_100073726 | 500 |
| 123 | 3300025960 | Ga0207651_10014151 | Ga0207651_100141513 | 500 |
| 124 | 3300025960 | Ga0207651_10020452 | Ga0207651_100204523 | 500 |
| 125 | 3300025961 | Ga0207712_10007732 | Ga0207712_100077323 | 500 |
| 126 | 3300025961 | Ga0207712_10017873 | Ga0207712_100178733 | 500 |
| 127 | 3300026023 | Ga0207677_10059130 | Ga0207677_100591302 | 500 |
| 128 | 3300026035 | Ga0207703_10056188 | Ga0207703_100561883 | 500 |
| 129 | 3300026088 | Ga0207641_10000275 | Ga0207641_1000027514 | 500 |
| 130 | 3300031901 | Ga0307406_10055442 | Ga0307406_100554424 | 500 |
| 131 | 3300032004 | Ga0307414_10129365 | Ga0307414_101293652 | 500 |
| 132 | 3300037471 | Ga0395905_0012891 | Ga0395905_0012891_1947_3476 | 500 |
| 133 | 3300041406 | Ga0439439_0012449 | Ga0439439_0012449_373_1905 | 500 |
| 134 | 3300042007 | Ga0439449_0008664 | Ga0439449_0008664_418_1950 | 500 |
| 135 | 3300044673 | Ga0453683_0025216 | Ga0453683_0025216_1352_2875 | 500 |
| 136 | 3300046539 | Ga0495621_0021110 | Ga0495621_0021110_542_2065 | 500 |
| 137 | 3300047319 | Ga0495674_0146678 | Ga0495674_0146678_344_1852 | 500 |
| 138 | 3300047320 | Ga0495672_0013451 | Ga0495672_0013451_3553_5076 | 500 |
| 139 | 3300049521 | Ga0501298_000925 | Ga0501298_000925_1670_3202 | 500 |
| 140 | 3300049572 | Ga0501036_0042514 | Ga0501036_0042514_387_1916 | 500 |
| 141 | 3300049575 | Ga0501039_0132707 | Ga0501039_0132707_364_1893 | 500 |
| 142 | 3300049651 | Ga0501201_000028 | Ga0501201_000028_7258_8790 | 500 |
| 143 | 3300049652 | Ga0501202_001355 | Ga0501202_001355_246_1778 | 500 |
| 144 | 3300049674 | Ga0501242_000343 | Ga0501242_000343_1415_2947 | 500 |
| 145 | 3300049675 | Ga0501243_000875 | Ga0501243_000875_615_2147 | 500 |
| 146 | 3300049675 | Ga0501243_007250 | Ga0501243_007250_41_1570 | 500 |
| 147 | 3300049680 | Ga0501250_001067 | Ga0501250_001067_349_1878 | 500 |
| 148 | 3300049690 | Ga0501261_000246 | Ga0501261_000246_1820_3352 | 500 |
| 149 | 3300049705 | Ga0501225_0007432 | Ga0501225_0007432_1263_2792 | 500 |
| 150 | 3300053139 | Ga0500568_0000394 | Ga0500568_0000394_5766_7289 | 500 |
| 151 | 3300053727 | Ga0500611_000004 | Ga0500611_000004_150739_152268 | 500 |
| 152 | 3300053730 | Ga0500645_026108 | Ga0500645_026108_87_1610 | 500 |
| 153 | iso_pu_bacteria | 2896317667 | 2896320744 | 500 |
| 154 | 3300042876 | Ga0451577_0005281 | Ga0451577_0005281_182_1711 | 501 |
| 155 | 3300005288 | Ga0065714_10002866 | Ga0065714_1000286610 | 502 |
| 156 | 3300005289 | Ga0065704_10000218 | Ga0065704_100002188 | 502 |
| 157 | 3300005327 | Ga0070658_10059151 | Ga0070658_100591512 | 502 |
| 158 | 3300005616 | Ga0068852_100130714 | Ga0068852_1001307142 | 502 |
| 159 | 3300013100 | Ga0157373_10005321 | Ga0157373_100053218 | 502 |
| 160 | 3300013102 | Ga0157371_10001517 | Ga0157371_1000151721 | 502 |
| 161 | 3300014497 | Ga0182008_10000025 | Ga0182008_1000002583 | 502 |
| 162 | 3300025921 | Ga0207652_10194558 | Ga0207652_101945582 | 502 |
| 163 | 3300031911 | Ga0307412_10000001 | Ga0307412_10000001487 | 502 |
| 164 | 3300032004 | Ga0307414_10000702 | Ga0307414_1000070211 | 502 |
| 165 | 3300032004 | Ga0307414_10001018 | Ga0307414_100010188 | 502 |
| 166 | 3300032004 | Ga0307414_10001152 | Ga0307414_100011529 | 502 |
| 167 | 3300048918 | Ga0496115_0032750 | Ga0496115_0032750_61_1572 | 502 |
| 168 | 3300048919 | Ga0496116_0002140 | Ga0496116_0002140_18253_19773 | 503 |
| 169 | 3300048920 | Ga0496117_0001774 | Ga0496117_0001774_3880_5400 | 503 |
| 170 | 3300048921 | Ga0496118_0080361 | Ga0496118_0080361_402_1922 | 503 |
| 171 | 3300048925 | Ga0496122_0003563 | Ga0496122_0003563_14754_16274 | 503 |
| 172 | 3300048926 | Ga0496123_0021106 | Ga0496123_0021106_280_1800 | 503 |
| 173 | 3300048927 | Ga0496124_0037110 | Ga0496124_0037110_1497_3017 | 503 |
| 174 | 3300048928 | Ga0496125_0071001 | Ga0496125_0071001_804_2324 | 503 |
| 175 | 3300049742 | Ga0501080_0208690 | Ga0501080_0208690_28_1560 | 503 |
| 176 | 3300005459 | Ga0068867_100007009 | Ga0068867_1000070096 | 505 |
| 177 | 3300009101 | Ga0105247_10000945 | Ga0105247_1000094515 | 505 |
| 178 | 3300009176 | Ga0105242_10024031 | Ga0105242_100240313 | 505 |
| 179 | 3300025900 | Ga0207710_10000833 | Ga0207710_100008336 | 505 |
| 180 | 3300026089 | Ga0207648_10012521 | Ga0207648_100125212 | 505 |
| 181 | 3300005347 | Ga0070668_100008040 | Ga0070668_1000080403 | 508 |
| 182 | 3300025940 | Ga0207691_10143753 | Ga0207691_101437532 | 508 |
| 183 | 3300025942 | Ga0207689_10032372 | Ga0207689_100323721 | 508 |
| 184 | 3300039437 | Ga0436365_1397768 | Ga0436365_1397768_594_2126 | 508 |
| 185 | 3300013308 | Ga0157375_10099067 | Ga0157375_100990673 | 509 |
| 186 | 3300026121 | Ga0207683_10079813 | Ga0207683_100798132 | 509 |
| 187 | 3300009553 | Ga0105249_10002194 | Ga0105249_1000219410 | 511 |
| 188 | 3300026095 | Ga0207676_10053714 | Ga0207676_100537143 | 511 |
| 189 | 3300049572 | Ga0501036_0092418 | Ga0501036_0092418_12_1628 | 511 |
| 190 | 3300049579 | Ga0501043_0128146 | Ga0501043_0128146_403_1971 | 511 |
| 191 | 3300005564 | Ga0070664_100121758 | Ga0070664_1001217581 | 512 |
| 192 | 3300013100 | Ga0157373_10018357 | Ga0157373_100183572 | 512 |
| 193 | 3300025945 | Ga0207679_10098946 | Ga0207679_100989462 | 512 |
| 194 | 3300032004 | Ga0307414_10005868 | Ga0307414_100058682 | 513 |
| 195 | 3300032004 | Ga0307414_10136573 | Ga0307414_101365732 | 513 |
| 196 | 2162886007 | SwRhRL2b_contig_3757853 | SwRhRL2b_0703.00006030 | 514 |
| 197 | 3300053093 | Ga0500651_0008070 | Ga0500651_0008070_1059_2603 | 514 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6brl-assembly1.cif.gz_A | crystal structure of a glutamate trna ligase from elizabethkingia meningosepticum ccug26117 in complex with its amino acid | 0.9252 | 16 | 514 |
| 6b1z-assembly1.cif.gz_A | crystal structure of glutamate-trna synthetase from elizabethkingia anophelis | 0.9234 | 16 | 511 |
| 6brl-assembly1.cif.gz_A | crystal structure of a glutamate trna ligase from elizabethkingia meningosepticum ccug26117 in complex with its amino acid | 0.9181 | 16 | 514 |
| 6b1z-assembly1.cif.gz_A | crystal structure of glutamate-trna synthetase from elizabethkingia anophelis | 0.9181 | 16 | 511 |
| 2o5r-assembly1.cif.gz_A | crystal structure of glutamyl-trna synthetase 1 (ec 6.1.1.17) (glutamate-trna ligase 1) (glurs 1) (tm1351) from thermotoga maritima at 2.5 a resolution | 0.8964 | 17 | 509 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 6brlA03 | Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 | 0.9657 | 265 | 365 | 1.10.1160.10 |
| 6brlA02 | Alpha Beta;Alpha-Beta Complex;Glutamyl-tRNA Synthetase; domain 3;Glutamyl-tRNA Synthetase; Domain 3 | 0.9631 | 86 | 210 | 3.90.800.10 |
| 1g59A02 | Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 | 0.9514 | 300 | 364 | 1.10.1160.10 |
| 6brlA03 | Mainly Alpha;Orthogonal Bundle;Glutamyl-tRNA Synthetase; domain 2;Glutamyl-trna Synthetase; Domain 2 | 0.9474 | 265 | 365 | 1.10.1160.10 |
| 2o5rA04 | Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.944 | 367 | 408 | 1.10.8.70 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q3AUI9-F1-model_v4 | deleted | 0.9819 | 185 | 514 |
|
| AF-A0A4Q3AUI9-F1-model_v4 | deleted | 0.976 | 185 | 514 |
|
| AF-A0A519RUV2-F1-model_v4 | Glutamate--tRNA ligase | 0.9715 | 13 | 190 |
GO:0004818
GO:0005524 GO:0005829 GO:0006424 |
| AF-A0A847XP83-F1-model_v4 | Glutamate--tRNA ligase | 0.9701 | 15 | 245 |
GO:0004818
GO:0005524 GO:0005829 GO:0006424 |
| AF-A0A519RUV2-F1-model_v4 | Glutamate--tRNA ligase | 0.9662 | 13 | 190 |
GO:0004818
GO:0005524 GO:0005829 GO:0006424 |
Predicted Structure (AlphaFold2)
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