F300849

General Info

Members Datasets Scaffolds Average Seq Length
195 159 390 413

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8023623736|8023631598
Length 462
Sequence GNRGWLLRLVIAFGFAQAAVSMARPAVSYRALALGADERAVGVIAGVYALLPLFAAVPLGRRTDHGRCAPLLPAGVVLIAGGCALSGVAGSLSTMALWSGVMGLGHLCFVIGAQSLVARQSAPHEQDRNFGHFTIGASLGQLIGPIAAGALIGGPDMAGSSALALVVAGAGAAVAFTSLWRIEHPGAAKSRAQQGARVPVVSILRARGVPAGILISLSVLSATDILTAYLPVVGEQRGISPAVIGVLLSLRAAATIACRLVLTPLLRLLGRTVLLTVTCLLAALLCAGVALPVPVWALALMLVVLGFCLGVGQPLSMTTVVQAAPDEARSTALALRLTGNRLGQVAAPAAAGLIAGVAGVAAPFVMLGALLLLSSGVALRSPSTGTTGAGGAGGAGGTTGTAGATGTAGASGASGASGASGASGATGATGATGRAAGPRSPETGQDVPDRAGDSRPCRESRG

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
5 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
6 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
7 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
8 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
9 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
10 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
11 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
12 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
13 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
14 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
15 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
16 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
17 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
18 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
19 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
20 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
21 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
22 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
23 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
24 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
25 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
26 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
27 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
28 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
29 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
30 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
31 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
32 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
33 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
34 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
35 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
36 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
37 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
38 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
39 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
40 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
41 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
42 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
43 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
44 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
45 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
46 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
47 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
48 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
49 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
50 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
51 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
52 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
53 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
54 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
55 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
56 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
57 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
58 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
59 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
60 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
61 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
62 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
63 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
64 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
65 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
66 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
67 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
68 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
69 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
70 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
71 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
72 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
73 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
74 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
75 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
76 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
77 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
78 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
79 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
80 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
81 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
82 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
90 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
91 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
92 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
93 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
94 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
95 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
96 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
97 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
98 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
99 2643221548 Streptomyces sp. Root55 Isolate Unclassified
100 2643221578 Streptomyces sp. Root63 Isolate Unclassified
101 2643221647 Streptomyces sp. Root369 Isolate Unclassified
102 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
103 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
104 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
105 2643221714 Streptomyces sp. Root264 Isolate Unclassified
106 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
107 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
108 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
109 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
110 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
111 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
112 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
113 2808606448 Streptomyces sp. 193411 Isolate Unclassified
114 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
115 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
116 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
117 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
118 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
119 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
120 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
121 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
122 2862574272 Streptomyces sp. AcE210 Isolate Nodule
123 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
124 2867428634 Streptomyces sp. RP5T Isolate Unclassified
125 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
126 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
127 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
128 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
129 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
130 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
131 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
132 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
133 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
134 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
135 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
136 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
137 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
138 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
139 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
140 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
141 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
142 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
143 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
144 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
145 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
146 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
147 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
148 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
149 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
150 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
151 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
152 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
153 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
154 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
155 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
156 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
157 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
158 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
159 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 65.13
Metatranscriptomes 0.51
Isolates 34.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.56
Nodule 2.05
Rhizoplane 0.51
Rhizosphere 72.31
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10011160 3300003323 Bacteria 2330
2 JGI25160J50197_1010312 3300003354 Bacteria 3389
3 Ga0006562J51391_1084290 3300003578 Bacteria 3380
4 Ga0075370_10015358 3300006353 Bacteria 4098
5 Ga0099826_10064790 3300006948 Bacteria 2353
6 Ga0105243_10157982 3300009148 Bacteria 1952
7 Ga0183367_1010 3300015688 Bacteria 416164
8 Ga0207426_1001268 3300025302 Bacteria 22033
9 Ga0207639_10097955 3300026041 Bacteria 2363
10 Ga0307515_10001087 3300028794 Bacteria 62233
11 Ga0307515_10191837 3300028794 Bacteria 1950
12 Ga0307511_10000282 3300030521 Bacteria 53455
13 Ga0307511_10032900 3300030521 Bacteria 4592
14 Ga0307512_10001647 3300030522 Bacteria 30894
15 Ga0307509_10003517 3300031507 Bacteria 23625
16 Ga0307509_10020768 3300031507 Bacteria 7449
17 Ga0307509_10069249 3300031507 Bacteria 3689
18 Ga0307508_10016765 3300031616 Bacteria 6665
19 Ga0307514_10003731 3300031649 Bacteria 14372
20 Ga0307516_10009576 3300031730 Bacteria 10788
21 Ga0307516_10094162 3300031730 Bacteria 2820
22 Ga0307518_10019077 3300031838 Bacteria 4926
23 Ga0307518_10097246 3300031838 Bacteria 2111
24 Ga0307510_10045627 3300033180 Bacteria 4726
25 Ga0307510_10046950 3300033180 Bacteria 4635
26 Ga0395898_0004976 3300037466 Bacteria 14419
27 Ga0395898_0007198 3300037466 Bacteria 11810
28 Ga0395898_0329941 3300037466 Bacteria 1455
29 Ga0439436_0013070 3300041404 Bacteria 2514
30 Ga0439439_0000825 3300041406 Bacteria 5650
31 Ga0439433_0000456 3300041999 Bacteria 7537
32 Ga0439442_004600 3300042002 Bacteria 2742
33 Ga0439449_0000235 3300042007 Bacteria 19938
34 Ga0439449_0010113 3300042007 Bacteria 3569
35 Ga0439457_000273 3300042014 Bacteria 14230
36 Ga0439457_004143 3300042014 Bacteria 3827
37 Ga0450894_000232 3300042131 Bacteria 9968
38 Ga0450898_000599 3300042134 Bacteria 4316
39 Ga0450903_000792 3300042138 Bacteria 6164
40 Ga0439458_0001821 3300042157 Bacteria 5300
41 Ga0466972_0001897 3300044658 Bacteria 10264
42 Ga0466972_0003915 3300044658 Bacteria 7421
43 Ga0466972_0056352 3300044658 Bacteria 1890
44 Ga0466965_0003505 3300044683 Bacteria 6889
45 Ga0466966_0000145 3300044684 Bacteria 45112
46 Ga0466966_0010406 3300044684 Bacteria 6178
47 Ga0466961_0000775 3300044693 Bacteria 20042
48 Ga0466961_0011468 3300044693 Bacteria 5668
49 Ga0466971_0001564 3300044719 Bacteria 9666
50 Ga0466970_0000074 3300044765 Bacteria 40311
51 Ga0466959_0009967 3300045049 Bacteria 6771
52 Ga0466967_0002990 3300045976 Bacteria 10827
53 Ga0466967_0013892 3300045976 Bacteria 6245
54 Ga0495592_0048108 3300046454 Bacteria 3173
55 Ga0495592_0070926 3300046454 Bacteria 2537
56 Ga0495603_0000249 3300046455 Bacteria 28144
57 Ga0495603_0000620 3300046455 Bacteria 19882
58 Ga0495603_0006246 3300046455 Bacteria 7123
59 Ga0495603_0088540 3300046455 Bacteria 1811
60 Ga0495629_0001772 3300046459 Bacteria 16937
61 Ga0495629_0020699 3300046459 Bacteria 4697
62 Ga0495629_0031204 3300046459 Bacteria 3774
63 Ga0495629_0081237 3300046459 Bacteria 2262
64 Ga0495638_0018967 3300046460 Bacteria 4557
65 Ga0495638_0077174 3300046460 Bacteria 2029
66 Ga0495651_0169098 3300046462 Bacteria 1558
67 Ga0495582_0021671 3300046473 Bacteria 3516
68 Ga0495605_0002516 3300046474 Bacteria 11314
69 Ga0495662_0026959 3300046476 Bacteria 2775
70 Ga0495594_0004211 3300046499 Bacteria 7385
71 Ga0495596_0012563 3300046500 Bacteria 3621
72 Ga0495583_0009067 3300046506 Bacteria 5992
73 Ga0495606_0013224 3300046507 Bacteria 6545
74 Ga0495610_0026769 3300046512 Bacteria 3075
75 Ga0495618_0012513 3300046514 Bacteria 5155
76 Ga0495620_0014242 3300046515 Bacteria 4048
77 Ga0495620_0018506 3300046515 Bacteria 3448
78 Ga0495630_0078221 3300046517 Bacteria 2494
79 Ga0495631_0006302 3300046518 Bacteria 6138
80 Ga0495632_0085695 3300046519 Bacteria 1499
81 Ga0495666_0075614 3300046526 Bacteria 1596
82 Ga0495652_0006546 3300046529 Bacteria 10825
83 Ga0495652_0054832 3300046529 Bacteria 3393
84 Ga0495587_0001440 3300046536 Bacteria 15855
85 Ga0495609_0007754 3300046538 Bacteria 5320
86 Ga0495597_0007717 3300046542 Bacteria 5439
87 Ga0495597_0010494 3300046542 Bacteria 4525
88 Ga0495622_0028228 3300046557 Bacteria 2620
89 Ga0495668_0025858 3300046616 Bacteria 3333
90 Ga0495634_0071765 3300046642 Bacteria 2278
91 Ga0495611_0053974 3300046648 Bacteria 1815
92 Ga0495625_0005004 3300046660 Bacteria 12297
93 Ga0495635_0042500 3300046663 Bacteria 3138
94 Ga0495588_0009662 3300046674 Bacteria 4468
95 Ga0495588_0032934 3300046674 Bacteria 2614
96 Ga0495657_0000341 3300046675 Bacteria 43007
97 Ga0495657_0051521 3300046675 Bacteria 2763
98 Ga0495646_0000499 3300046680 Bacteria 20995
99 Ga0495613_0057232 3300046689 Bacteria 2862
100 Ga0495613_0132857 3300046689 Bacteria 1781
101 Ga0495624_0025183 3300046690 Bacteria 3909
102 Ga0495649_0023945 3300046694 Bacteria 3408
103 Ga0495581_0000395 3300047315 Bacteria 21902
104 Ga0495604_0001874 3300047317 Bacteria 17091
105 Ga0495604_0018819 3300047317 Bacteria 5530
106 Ga0495636_0036326 3300047318 Bacteria 2031
107 Ga0495674_0057011 3300047319 Bacteria 3420
108 Ga0495676_0001578 3300047321 Bacteria 19776
109 Ga0495676_0002866 3300047321 Bacteria 15557
110 Ga0495676_0043042 3300047321 Bacteria 3699
111 Ga0495687_002083 3300047443 Bacteria 16813
112 Ga0495687_022897 3300047443 Bacteria 2992
113 Ga0495687_050180 3300047443 Bacteria 1779
114 Ga0495681_0000305 3300047470 Bacteria 39318
115 Ga0495593_0000288 3300047673 Bacteria 27330
116 Ga0495614_0009329 3300048089 Bacteria 4340
117 Ga0501033_0006944 3300049570 Bacteria 8842
118 Ga0501033_0195485 3300049570 Bacteria 1446
119 Ga0501034_0020748 3300049571 Bacteria 6706
120 Ga0501036_0000987 3300049572 Bacteria 21488
121 Ga0501038_0006810 3300049574 Bacteria 10557
122 Ga0501043_0028860 3300049579 Bacteria 4355
123 Ga0501047_0142630 3300049581 Bacteria 2273
124 Ga0501035_0025510 3300049822 Bacteria 5418
125 Ga0501044_0092408 3300049823 Bacteria 3051
126 nmdc:mga03n38_14675_c1 3300050490 Bacteria 3009
127 nmdc:mga04h51_4746_c1 3300050495 Bacteria 3410
128 Ga0466962_0001482 3300061719 Bacteria 10944
129 8023631598 8023623736 Bacteria 8593882
130 2547406753 2547132111 Bacteria 8013147
131 2585296776 2582581312 Bacteria 7308206
132 2585303829 2582581313 Bacteria 10042643
133 2585315495 2582581314 Bacteria 11452267
134 2616695891 2616644814 Bacteria 11555299
135 2643759955 2643221548 Bacteria 8053412
136 2643904711 2643221578 Bacteria 9213798
137 2644268297 2643221647 Bacteria 10741251
138 2644406023 2643221673 Bacteria 9196637
139 2644438450 2643221678 Bacteria 9540101
140 2644460349 2643221682 Bacteria 6743283
141 2644629270 2643221714 Bacteria 9015452
142 2784586959 2784132148 Bacteria 8627943
143 2785345475 2784746763 Bacteria 9783172
144 2785367407 2784746768 Bacteria 10036182
145 2786668453 2786546132 Bacteria 10419719
146 2793982313 2791355406 Bacteria 11364898
147 2808847910 2808606359 Bacteria 9866990
148 2808918660 2808606375 Bacteria 9466072
149 2809230523 2808606448 Bacteria 8656184
150 2812360080 2811994879 Bacteria 9313447
151 2812482144 2811994917 Bacteria 7761064
152 2819696635 2818991463 Bacteria 7948711
153 2852637944 2852635781 Bacteria 8251373
154 2862289383 2862281513 Bacteria 9621493
155 2862294396 2862290372 Bacteria 7471434
156 2862390386 2862382967 Bacteria 10317375
157 2862514186 2862507626 Bacteria 9425308
158 2862583443 2862574272 Bacteria 10567477
159 2863406739 2863404153 Bacteria 9672205
160 2867428642 2867428634 Bacteria 9590268
161 2873157455 2873151551 Bacteria 8625867
162 2875392903 2875391855 Bacteria 7600475
163 2877683146 2877676314 Bacteria 9512378
164 2912722130 2912715099 Bacteria 9460473
165 2919473657 2919468124 Bacteria 9133025
166 2946051793 2946045630 Bacteria 8527308
167 2946065811 2946064051 Bacteria 8957905
168 2946074152 2946072368 Bacteria 8999607
169 2947231588 2947224130 Bacteria 9938529
170 2954010808 2954002825 Bacteria 9173742
171 2954388361 2954380949 Bacteria 10050426
172 2954674729 2954673503 Bacteria 9685905
173 2954689404 2954682443 Bacteria 9862841
174 2954699176 2954691527 Bacteria 10720516
175 2954703042 2954701450 Bacteria 10834262
176 2954718129 2954711539 Bacteria 10867210
177 2954728097 2954721474 Bacteria 10456478
178 2954733709 2954731030 Bacteria 10243860
179 2954746994 2954740390 Bacteria 10229294
180 2954752593 2954749733 Bacteria 10366972
181 2954766107 2954759201 Bacteria 9358192
182 2966604170 2966598605 Bacteria 7676064
183 2990062674 2990059506 Bacteria 9321252
184 2997601862 2997600082 Bacteria 9896405
185 3006495268 3006493962 Bacteria 8825450
186 8008561571 8008558824 Bacteria 10610750
187 8008580521 8008574985 Bacteria 7815457
188 8025530856 8025530807 Bacteria 8495698
189 8047900045 8047893842 Bacteria 11723082
190 8048131169 8048127548 Bacteria 11053136
191 8048358883 8048356638 Bacteria 11044339
192 8048376992 8048369669 Bacteria 11666822
193 8048386047 8048379754 Bacteria 11877923
194 8048412081 8048406513 Bacteria 8936924
195 8056835463 8056829672 Bacteria 9045328
196 rootH1_10011160
197 JGI25160J50197_1010312
198 Ga0006562J51391_1084290
199 Ga0075370_10015358
200 Ga0099826_10064790
201 Ga0105243_10157982
202 Ga0183367_1010
203 Ga0207426_1001268
204 Ga0207639_10097955
205 Ga0307515_10001087
206 Ga0307515_10191837
207 Ga0307511_10000282
208 Ga0307511_10032900
209 Ga0307512_10001647
210 Ga0307509_10003517
211 Ga0307509_10020768
212 Ga0307509_10069249
213 Ga0307508_10016765
214 Ga0307514_10003731
215 Ga0307516_10009576
216 Ga0307516_10094162
217 Ga0307518_10019077
218 Ga0307518_10097246
219 Ga0307510_10045627
220 Ga0307510_10046950
221 Ga0395898_0004976
222 Ga0395898_0007198
223 Ga0395898_0329941
224 Ga0439436_0013070
225 Ga0439439_0000825
226 Ga0439433_0000456
227 Ga0439442_004600
228 Ga0439449_0000235
229 Ga0439449_0010113
230 Ga0439457_000273
231 Ga0439457_004143
232 Ga0450894_000232
233 Ga0450898_000599
234 Ga0450903_000792
235 Ga0439458_0001821
236 Ga0466972_0001897
237 Ga0466972_0003915
238 Ga0466972_0056352
239 Ga0466965_0003505
240 Ga0466966_0000145
241 Ga0466966_0010406
242 Ga0466961_0000775
243 Ga0466961_0011468
244 Ga0466971_0001564
245 Ga0466970_0000074
246 Ga0466959_0009967
247 Ga0466967_0002990
248 Ga0466967_0013892
249 Ga0495592_0048108
250 Ga0495592_0070926
251 Ga0495603_0000249
252 Ga0495603_0000620
253 Ga0495603_0006246
254 Ga0495603_0088540
255 Ga0495629_0001772
256 Ga0495629_0020699
257 Ga0495629_0031204
258 Ga0495629_0081237
259 Ga0495638_0018967
260 Ga0495638_0077174
261 Ga0495651_0169098
262 Ga0495582_0021671
263 Ga0495605_0002516
264 Ga0495662_0026959
265 Ga0495594_0004211
266 Ga0495596_0012563
267 Ga0495583_0009067
268 Ga0495606_0013224
269 Ga0495610_0026769
270 Ga0495618_0012513
271 Ga0495620_0014242
272 Ga0495620_0018506
273 Ga0495630_0078221
274 Ga0495631_0006302
275 Ga0495632_0085695
276 Ga0495666_0075614
277 Ga0495652_0006546
278 Ga0495652_0054832
279 Ga0495587_0001440
280 Ga0495609_0007754
281 Ga0495597_0007717
282 Ga0495597_0010494
283 Ga0495622_0028228
284 Ga0495668_0025858
285 Ga0495634_0071765
286 Ga0495611_0053974
287 Ga0495625_0005004
288 Ga0495635_0042500
289 Ga0495588_0009662
290 Ga0495588_0032934
291 Ga0495657_0000341
292 Ga0495657_0051521
293 Ga0495646_0000499
294 Ga0495613_0057232
295 Ga0495613_0132857
296 Ga0495624_0025183
297 Ga0495649_0023945
298 Ga0495581_0000395
299 Ga0495604_0001874
300 Ga0495604_0018819
301 Ga0495636_0036326
302 Ga0495674_0057011
303 Ga0495676_0001578
304 Ga0495676_0002866
305 Ga0495676_0043042
306 Ga0495687_002083
307 Ga0495687_022897
308 Ga0495687_050180
309 Ga0495681_0000305
310 Ga0495593_0000288
311 Ga0495614_0009329
312 Ga0501033_0006944
313 Ga0501033_0195485
314 Ga0501034_0020748
315 Ga0501036_0000987
316 Ga0501038_0006810
317 Ga0501043_0028860
318 Ga0501047_0142630
319 Ga0501035_0025510
320 Ga0501044_0092408
321 nmdc:mga03n38_14675_c1
322 nmdc:mga04h51_4746_c1
323 Ga0466962_0001482
324 8023631598
325 2547406753
326 2585296776
327 2585303829
328 2585315495
329 2616695891
330 2643759955
331 2643904711
332 2644268297
333 2644406023
334 2644438450
335 2644460349
336 2644629270
337 2784586959
338 2785345475
339 2785367407
340 2786668453
341 2793982313
342 2808847910
343 2808918660
344 2809230523
345 2812360080
346 2812482144
347 2819696635
348 2852637944
349 2862289383
350 2862294396
351 2862390386
352 2862514186
353 2862583443
354 2863406739
355 2867428642
356 2873157455
357 2875392903
358 2877683146
359 2912722130
360 2919473657
361 2946051793
362 2946065811
363 2946074152
364 2947231588
365 2954010808
366 2954388361
367 2954674729
368 2954689404
369 2954699176
370 2954703042
371 2954718129
372 2954728097
373 2954733709
374 2954746994
375 2954752593
376 2954766107
377 2966604170
378 2990062674
379 2997601862
380 3006495268
381 8008561571
382 8008580521
383 8025530856
384 8047900045
385 8048131169
386 8048358883
387 8048376992
388 8048386047
389 8048412081
390 8056835463

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

290

399

0.9

PF07690

MFS_1

Major Facilitator Superfamily

9

327

0.86

PF12832

MFS_1_like

MFS_1 like family

34

358

0.84

PF06779

MFS_4

Uncharacterised MFS-type transporter YbfB

9

179

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.4701 41 371
8sc2-assembly1.cif.gz_A human oct1 bound to diltiazem in inward-open conformation 0.4674 45 370
8sc6-assembly1.cif.gz_A human oct1 bound to thiamine in inward-open conformation 0.463 40 371
8sc1-assembly1.cif.gz_A human oct1 (apo) in inward-open conformation 0.4629 40 371
6zgr-assembly2.cif.gz_B crystal structure of a mfs transporter with bound 1-hydroxynaphthalene-2-carboxylic acid at 2.67 angstroem resolution 0.4594 9 372
ID Description Score Start End Superfamily
af_P21503_7_181_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8985 205 367 1.20.1250.20
af_O07730_11_220_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8939 204 373 1.20.1250.20
af_Q2G1R0_213_401_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.892 205 368 1.20.1250.20
af_G5ECR3_30_224_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8805 204 376 1.20.1250.20
af_D3ZU10_247_452_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8794 201 367 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A358L8V1-F1-model_v4 EmrB/QacA family drug resistance transporter 0.9038 204 369 GO:0005886
GO:0022857
AF-A0A3C0UV67-F1-model_v4 MFS transporter 0.8889 204 373 GO:0005886
GO:0022857
AF-Q6HP38-F1-model_v4 Sugar transporter possible benzoate transport protein 0.8797 216 371 GO:0005886
GO:0046943
AF-A0A536SDR3-F1-model_v4 MFS transporter 0.8788 10 172 GO:0005886
GO:0022857
AF-A0A497LT54-F1-model_v4 deleted 0.874 196 371

Map