F300845

General Info

Members Datasets Scaffolds Average Seq Length
195 158 390 701

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8008574985|8008578140
Length 777
Sequence RPGGGLSPMQQAAKFLGVSVLAGAVMAGIALPAAGALGLAAKGSVQGFDEIPANLKSPQLSQRTTILDNQGKQIATVYSRDRTVVDLKDISPYMQKAIVAIEDSRFYQHGAVDLKGVLRALNKNAQEGGVAQGASTLTQQLVKNYFIEEAGDDPTKVAEATQQTLGRKIRELKYAIQIEDKLGKKKILENYLNITFFGEQAYGVEAASQRYFSKHAKDLNLQESALLAGIVQSPSRYDPVNDEAEATKRRNTVLQRMAELGDISQKEADQAKEKPLGLHTSRPKNGCITAAKGAGFFCDYVRQVVLTDPVFGKTKEARAKLWNRGGLTIRTTLDPQAQRSAQASIKDHVYKSDAVATAATIVEPGTGKILAMGQSRPYGVNVKDDETTINLSVNGDMGGGAGYQPGSTFKPIVAAAAVEGGKPPTQEYSSPYEMTYPSPVSACDGKTWHDDPNKPTKLTNENESEHGPYAMKEATAKSVNTYYVQLISDIGICPVIDMAKKMGVQRADGRQIQQAPSIALGTQEMSPLTMANAYATFASRGMYCTPVAIESVTKKVGSERKSLPVPKSTCSRAMSEQTADTVSTLLKGVVEDGTGQEAGLGSRPSAGKTGTTDERFAAWFVGYTPNMAGAVWVGDPQHKRKMTNITIGGVPHDKVYGGEVPGPIWRDMMSGALEGKPVEDFHLVDIPDDTHEGDDPGKGDGGTEDDNNRATTGRLIGGLIGGPTDGGATHGTTGDATGGTLGGTFPTPTISLPGNFIQGQVNGGNNGHGHGGAGGRR

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
3 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
4 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
5 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
6 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
7 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
8 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
9 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
10 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
11 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
12 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
13 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
14 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
15 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
16 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
17 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
18 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
19 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
20 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
21 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
22 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
23 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
24 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
25 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
26 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
27 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
28 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
29 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
30 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
31 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
32 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
33 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
34 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
35 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
36 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
37 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
38 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
39 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
40 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
41 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
42 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
43 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
44 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
45 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
46 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
47 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
48 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
49 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
50 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
51 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
52 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
53 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
54 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
55 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
56 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
57 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
58 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
59 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
60 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
61 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
62 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
63 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
64 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
65 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
66 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
67 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
68 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
69 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
70 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
71 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
72 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
73 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
74 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
75 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
76 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
77 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
78 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
79 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
91 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
95 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
96 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
97 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
98 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
99 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
100 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
101 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
102 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
103 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
104 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
105 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
106 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
107 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
108 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
109 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
110 2643221548 Streptomyces sp. Root55 Isolate Unclassified
111 2643221578 Streptomyces sp. Root63 Isolate Unclassified
112 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
113 2643221670 Streptomyces sp. Root431 Isolate Unclassified
114 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
115 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
116 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
117 2643221714 Streptomyces sp. Root264 Isolate Unclassified
118 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
119 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
120 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
121 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
122 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
123 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
124 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
125 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
126 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
127 2862574272 Streptomyces sp. AcE210 Isolate Nodule
128 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
129 2867369537 Streptomyces sp. Z26 Isolate Unclassified
130 2867475112 Streptomyces sp. TM32 Isolate Unclassified
131 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
132 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
133 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
134 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
135 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
136 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
137 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
138 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
139 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
140 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
141 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
142 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
143 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
144 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
145 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
146 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
147 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
148 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
149 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
150 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
151 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
152 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
153 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
154 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
155 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
156 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
157 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
158 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.33
Metatranscriptomes 0
Isolates 26.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.23
Nodule 1.54
Rhizoplane 1.03
Rhizosphere 69.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100063371 3300005563 Bacteria 4314
2 Ga0075367_10005235 3300006178 Bacteria 6412
3 Ga0105247_10037679 3300009101 Bacteria 2950
4 Ga0105248_10036371 3300009177 Bacteria 5506
5 Ga0105238_10056747 3300009551 Bacteria 3928
6 Ga0105246_10030443 3300011119 Bacteria 3565
7 Ga0182008_10015795 3300014497 Bacteria 3933
8 Ga0182007_10001097 3300015262 Bacteria 14711
9 Ga0209758_1004739 3300025297 Bacteria 11064
10 Ga0207426_1000909 3300025302 Bacteria 29658
11 Ga0207426_1003574 3300025302 Bacteria 8274
12 Ga0207647_10012146 3300025904 Bacteria 6009
13 Ga0209813_10002049 3300027866 Bacteria 4577
14 Ga0307517_10002603 3300028786 Bacteria 28721
15 Ga0307517_10016652 3300028786 Bacteria 9643
16 Ga0307515_10000965 3300028794 Bacteria 65641
17 Ga0307515_10055988 3300028794 Bacteria 5744
18 Ga0307511_10026629 3300030521 Bacteria 5301
19 Ga0307511_10040994 3300030521 Bacteria 3919
20 Ga0307512_10000978 3300030522 Bacteria 42035
21 Ga0307508_10002276 3300031616 Bacteria 20441
22 Ga0307508_10013987 3300031616 Bacteria 7322
23 Ga0307508_10017780 3300031616 Bacteria 6467
24 Ga0307508_10046341 3300031616 Bacteria 3881
25 Ga0307516_10016490 3300031730 Bacteria 7720
26 Ga0307507_10031112 3300033179 Bacteria 5609
27 Ga0307510_10041541 3300033180 Bacteria 5025
28 Ga0395898_0010811 3300037466 Bacteria 9536
29 Ga0395898_0022829 3300037466 Bacteria 6329
30 Ga0395901_0042339 3300038443 Bacteria 4721
31 Ga0439436_0000906 3300041404 Bacteria 8127
32 Ga0439436_0010145 3300041404 Bacteria 2875
33 Ga0439439_0000759 3300041406 Bacteria 5805
34 Ga0451853_0842277 3300041512 Bacteria 3593
35 Ga0439433_0003670 3300041999 Bacteria 3297
36 Ga0439449_0000196 3300042007 Bacteria 21165
37 Ga0439457_000634 3300042014 Bacteria 10371
38 Ga0439457_002277 3300042014 Bacteria 5523
39 Ga0450894_000976 3300042131 Bacteria 4457
40 Ga0450899_000059 3300042135 Bacteria 8921
41 Ga0450906_000129 3300042145 Bacteria 13330
42 Ga0466972_0028013 3300044658 Bacteria 2783
43 Ga0466963_0023605 3300044694 Bacteria 3908
44 Ga0466970_0007645 3300044765 Bacteria 5417
45 Ga0466970_0033667 3300044765 Bacteria 2709
46 Ga0466960_0002340 3300044901 Bacteria 7121
47 Ga0466959_0049967 3300045049 Bacteria 3072
48 Ga0495617_004168 3300046452 Bacteria 5296
49 Ga0495603_0002629 3300046455 Bacteria 10601
50 Ga0495603_0004443 3300046455 Bacteria 8362
51 Ga0495603_0014377 3300046455 Bacteria 4787
52 Ga0495629_0006242 3300046459 Bacteria 8845
53 Ga0495629_0053559 3300046459 Bacteria 2822
54 Ga0495638_0014508 3300046460 Bacteria 5321
55 Ga0495651_0017967 3300046462 Bacteria 5477
56 Ga0495582_0008603 3300046473 Bacteria 5629
57 Ga0495662_0015170 3300046476 Bacteria 3742
58 Ga0495662_0024640 3300046476 Bacteria 2903
59 Ga0495664_0002551 3300046477 Bacteria 9793
60 Ga0495618_0010368 3300046514 Bacteria 5636
61 Ga0495628_0028164 3300046516 Bacteria 4567
62 Ga0495643_0001360 3300046522 Bacteria 22880
63 Ga0495643_0010282 3300046522 Bacteria 5762
64 Ga0495648_0037396 3300046524 Bacteria 3119
65 Ga0495652_0028991 3300046529 Bacteria 4862
66 Ga0495654_0021054 3300046530 Bacteria 3395
67 Ga0495587_0005175 3300046536 Bacteria 8521
68 Ga0495622_0026193 3300046557 Bacteria 2724
69 Ga0495668_0021244 3300046616 Bacteria 3724
70 Ga0495634_0000903 3300046642 Bacteria 28448
71 Ga0495625_0002645 3300046660 Bacteria 19105
72 Ga0495625_0039149 3300046660 Bacteria 3464
73 Ga0495635_0014617 3300046663 Bacteria 5490
74 Ga0495588_0002095 3300046674 Bacteria 8558
75 Ga0495588_0006418 3300046674 Bacteria 5294
76 Ga0495657_0005375 3300046675 Bacteria 10129
77 Ga0495646_0012329 3300046680 Bacteria 5436
78 Ga0495613_0011631 3300046689 Bacteria 6542
79 Ga0495613_0076269 3300046689 Bacteria 2440
80 Ga0495624_0018806 3300046690 Bacteria 4618
81 Ga0495624_0051462 3300046690 Bacteria 2606
82 Ga0495670_0006205 3300046691 Bacteria 5869
83 Ga0495671_0011675 3300046692 Bacteria 4819
84 Ga0495589_0021339 3300046794 Bacteria 3309
85 Ga0495589_0023312 3300046794 Bacteria 3155
86 Ga0495589_0041133 3300046794 Bacteria 2306
87 Ga0495600_0003675 3300046809 Bacteria 9063
88 Ga0495600_0059515 3300046809 Bacteria 2495
89 Ga0495660_0008754 3300046810 Bacteria 5913
90 Ga0495581_0024294 3300047315 Bacteria 3512
91 Ga0495604_0000597 3300047317 Bacteria 31188
92 Ga0495676_0010320 3300047321 Bacteria 8473
93 Ga0495676_0017734 3300047321 Bacteria 6287
94 Ga0495676_0020865 3300047321 Bacteria 5736
95 Ga0495687_016228 3300047443 Bacteria 3750
96 Ga0495675_0008422 3300047444 Bacteria 6388
97 Ga0495685_001380 3300047447 Bacteria 7433
98 Ga0495685_015491 3300047447 Bacteria 2600
99 Ga0495681_0015410 3300047470 Bacteria 4325
100 Ga0495686_0009321 3300047472 Bacteria 7084
101 Ga0495686_0023187 3300047472 Bacteria 4096
102 Ga0495593_0010504 3300047673 Bacteria 5343
103 Ga0495602_0004911 3300048088 Bacteria 14001
104 Ga0495614_0002530 3300048089 Bacteria 8122
105 Ga0495614_0011679 3300048089 Bacteria 3861
106 Ga0496109_0089865 3300048912 Bacteria 2840
107 Ga0501032_0011345 3300049569 Bacteria 6400
108 Ga0501033_0008051 3300049570 Bacteria 8164
109 Ga0501033_0009969 3300049570 Bacteria 7294
110 Ga0501034_0006360 3300049571 Bacteria 12720
111 Ga0501034_0017345 3300049571 Bacteria 7384
112 Ga0501036_0016387 3300049572 Bacteria 6191
113 Ga0501037_0016847 3300049573 Bacteria 5376
114 Ga0501038_0029798 3300049574 Bacteria 4833
115 Ga0501039_0004765 3300049575 Bacteria 10274
116 Ga0501039_0031200 3300049575 Bacteria 4108
117 Ga0501042_0017010 3300049578 Bacteria 5007
118 Ga0501043_0003892 3300049579 Bacteria 12255
119 Ga0501043_0007590 3300049579 Bacteria 8600
120 Ga0501043_0051643 3300049579 Bacteria 3230
121 Ga0501047_0009849 3300049581 Bacteria 9030
122 Ga0501047_0051954 3300049581 Bacteria 3961
123 Ga0501048_0017089 3300049582 Bacteria 5347
124 Ga0501070_0023121 3300049586 Bacteria 5206
125 Ga0501074_0005992 3300049590 Bacteria 8770
126 Ga0501035_0004904 3300049822 Bacteria 12695
127 Ga0501035_0031815 3300049822 Bacteria 4805
128 Ga0501035_0059729 3300049822 Bacteria 3395
129 Ga0501044_0051351 3300049823 Bacteria 4251
130 Ga0501044_0053006 3300049823 Bacteria 4175
131 nmdc:mga06z11_3181_c1 3300050494 Bacteria 6338
132 nmdc:mga04h51_6628_c1 3300050495 Bacteria 3014
133 Ga0500578_0014139 3300053086 Bacteria 5135
134 Ga0500640_017919 3300053095 Bacteria 3013
135 Ga0500608_014619 3300053122 Bacteria 3509
136 Ga0500628_002031 3300053129 Bacteria 3403
137 Ga0500652_001472 3300053131 Bacteria 7266
138 Ga0500658_0005464 3300053134 Bacteria 4726
139 Ga0500573_0013052 3300053140 Bacteria 4674
140 Ga0500616_0037557 3300053153 Bacteria 2621
141 Ga0500633_0000498 3300053160 Bacteria 6289
142 Ga0500634_0001301 3300053161 Bacteria 9511
143 Ga0500587_001137 3300053739 Bacteria 3663
144 8008578140 8008574985 Bacteria 7815457
145 2585297944 2582581312 Bacteria 7308206
146 2616903711 2616644941 Bacteria 8510691
147 2643763406 2643221548 Bacteria 8053412
148 2643900599 2643221578 Bacteria 9213798
149 2643947550 2643221587 Bacteria 7586415
150 2644390317 2643221670 Bacteria 6497041
151 2644405180 2643221673 Bacteria 9196637
152 2644435242 2643221677 Bacteria 7584031
153 2644463724 2643221682 Bacteria 6743283
154 2644628098 2643221714 Bacteria 9015452
155 2785342270 2784746763 Bacteria 9783172
156 2793983151 2791355406 Bacteria 11364898
157 2804846620 2802429296 Bacteria 7227771
158 2808921309 2808606375 Bacteria 9466072
159 2812357161 2811994879 Bacteria 9313447
160 2819698194 2818991463 Bacteria 7948711
161 2852639958 2852635781 Bacteria 8251373
162 2862180097 2862178590 Bacteria 8583590
163 2862389013 2862382967 Bacteria 10317375
164 2862578529 2862574272 Bacteria 10567477
165 2863412016 2863404153 Bacteria 9672205
166 2867372775 2867369537 Bacteria 6501581
167 2867480705 2867475112 Bacteria 6909112
168 2873155061 2873151551 Bacteria 8625867
169 2875394770 2875391855 Bacteria 7600475
170 2912731153 2912723979 Bacteria 8557534
171 2912761758 2912757875 Bacteria 7940295
172 2918504765 2918501144 Bacteria 8668083
173 2946049092 2946045630 Bacteria 8527308
174 2946068714 2946064051 Bacteria 8957905
175 2946076715 2946072368 Bacteria 8999607
176 2947228192 2947224130 Bacteria 9938529
177 2966602388 2966598605 Bacteria 7676064
178 2990066684 2990059506 Bacteria 9321252
179 2990091360 2990088156 Bacteria 6657676
180 2997454387 2997451912 Bacteria 8492419
181 2997600127 2997600082 Bacteria 9896405
182 3006425605 3006425503 Bacteria 6491253
183 8008566111 8008558824 Bacteria 10610750
184 8025415085 8025413630 Bacteria 7014048
185 8025478272 8025478263 Bacteria 8209203
186 8025538237 8025530807 Bacteria 8495698
187 8033688010 8033684223 Bacteria 6906479
188 8047897784 8047893842 Bacteria 11723082
189 8048128709 8048127548 Bacteria 11053136
190 8048361087 8048356638 Bacteria 11044339
191 8048374770 8048369669 Bacteria 11666822
192 8048383452 8048379754 Bacteria 11877923
193 8048410094 8048406513 Bacteria 8936924
194 8054161248 8054160619 Bacteria 7783213
195 8056453942 8056447290 Bacteria 7680491
196 Ga0068855_100063371
197 Ga0075367_10005235
198 Ga0105247_10037679
199 Ga0105248_10036371
200 Ga0105238_10056747
201 Ga0105246_10030443
202 Ga0182008_10015795
203 Ga0182007_10001097
204 Ga0209758_1004739
205 Ga0207426_1000909
206 Ga0207426_1003574
207 Ga0207647_10012146
208 Ga0209813_10002049
209 Ga0307517_10002603
210 Ga0307517_10016652
211 Ga0307515_10000965
212 Ga0307515_10055988
213 Ga0307511_10026629
214 Ga0307511_10040994
215 Ga0307512_10000978
216 Ga0307508_10002276
217 Ga0307508_10013987
218 Ga0307508_10017780
219 Ga0307508_10046341
220 Ga0307516_10016490
221 Ga0307507_10031112
222 Ga0307510_10041541
223 Ga0395898_0010811
224 Ga0395898_0022829
225 Ga0395901_0042339
226 Ga0439436_0000906
227 Ga0439436_0010145
228 Ga0439439_0000759
229 Ga0451853_0842277
230 Ga0439433_0003670
231 Ga0439449_0000196
232 Ga0439457_000634
233 Ga0439457_002277
234 Ga0450894_000976
235 Ga0450899_000059
236 Ga0450906_000129
237 Ga0466972_0028013
238 Ga0466963_0023605
239 Ga0466970_0007645
240 Ga0466970_0033667
241 Ga0466960_0002340
242 Ga0466959_0049967
243 Ga0495617_004168
244 Ga0495603_0002629
245 Ga0495603_0004443
246 Ga0495603_0014377
247 Ga0495629_0006242
248 Ga0495629_0053559
249 Ga0495638_0014508
250 Ga0495651_0017967
251 Ga0495582_0008603
252 Ga0495662_0015170
253 Ga0495662_0024640
254 Ga0495664_0002551
255 Ga0495618_0010368
256 Ga0495628_0028164
257 Ga0495643_0001360
258 Ga0495643_0010282
259 Ga0495648_0037396
260 Ga0495652_0028991
261 Ga0495654_0021054
262 Ga0495587_0005175
263 Ga0495622_0026193
264 Ga0495668_0021244
265 Ga0495634_0000903
266 Ga0495625_0002645
267 Ga0495625_0039149
268 Ga0495635_0014617
269 Ga0495588_0002095
270 Ga0495588_0006418
271 Ga0495657_0005375
272 Ga0495646_0012329
273 Ga0495613_0011631
274 Ga0495613_0076269
275 Ga0495624_0018806
276 Ga0495624_0051462
277 Ga0495670_0006205
278 Ga0495671_0011675
279 Ga0495589_0021339
280 Ga0495589_0023312
281 Ga0495589_0041133
282 Ga0495600_0003675
283 Ga0495600_0059515
284 Ga0495660_0008754
285 Ga0495581_0024294
286 Ga0495604_0000597
287 Ga0495676_0010320
288 Ga0495676_0017734
289 Ga0495676_0020865
290 Ga0495687_016228
291 Ga0495675_0008422
292 Ga0495685_001380
293 Ga0495685_015491
294 Ga0495681_0015410
295 Ga0495686_0009321
296 Ga0495686_0023187
297 Ga0495593_0010504
298 Ga0495602_0004911
299 Ga0495614_0002530
300 Ga0495614_0011679
301 Ga0496109_0089865
302 Ga0501032_0011345
303 Ga0501033_0008051
304 Ga0501033_0009969
305 Ga0501034_0006360
306 Ga0501034_0017345
307 Ga0501036_0016387
308 Ga0501037_0016847
309 Ga0501038_0029798
310 Ga0501039_0004765
311 Ga0501039_0031200
312 Ga0501042_0017010
313 Ga0501043_0003892
314 Ga0501043_0007590
315 Ga0501043_0051643
316 Ga0501047_0009849
317 Ga0501047_0051954
318 Ga0501048_0017089
319 Ga0501070_0023121
320 Ga0501074_0005992
321 Ga0501035_0004904
322 Ga0501035_0031815
323 Ga0501035_0059729
324 Ga0501044_0051351
325 Ga0501044_0053006
326 nmdc:mga06z11_3181_c1
327 nmdc:mga04h51_6628_c1
328 Ga0500578_0014139
329 Ga0500640_017919
330 Ga0500608_014619
331 Ga0500628_002031
332 Ga0500652_001472
333 Ga0500658_0005464
334 Ga0500573_0013052
335 Ga0500616_0037557
336 Ga0500633_0000498
337 Ga0500634_0001301
338 Ga0500587_001137
339 8008578140
340 2585297944
341 2616903711
342 2643763406
343 2643900599
344 2643947550
345 2644390317
346 2644405180
347 2644435242
348 2644463724
349 2644628098
350 2785342270
351 2793983151
352 2804846620
353 2808921309
354 2812357161
355 2819698194
356 2852639958
357 2862180097
358 2862389013
359 2862578529
360 2863412016
361 2867372775
362 2867480705
363 2873155061
364 2875394770
365 2912731153
366 2912761758
367 2918504765
368 2946049092
369 2946068714
370 2946076715
371 2947228192
372 2966602388
373 2990066684
374 2990091360
375 2997454387
376 2997600127
377 3006425605
378 8008566111
379 8025415085
380 8025478272
381 8025538237
382 8033688010
383 8047897784
384 8048128709
385 8048361087
386 8048374770
387 8048383452
388 8048410094
389 8054161248
390 8056453942

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00912

Transgly

Transglycosylase

70

258

0.94

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

357

669

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.8417 80 272
3nb7-assembly1.cif.gz_A-2 crystal structure of aquifex aeolicus peptidoglycan glycosyltransferase in complex with decarboxylated neryl moenomycin 0.8286 80 272
3d3h-assembly1.cif.gz_A-2 crystal structure of a complex of the peptidoglycan glycosyltransferase domain from aquifex aeolicus and neryl moenomycin a 0.8278 80 272
2oqo-assembly1.cif.gz_A-2 crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis 0.8222 75 272
2oqo-assembly1.cif.gz_A-2 crystal structure of a peptidoglycan glycosyltransferase from a class a pbp: insight into bacterial cell wall synthesis 0.8135 75 272
ID Description Score Start End Superfamily
3fwmA02 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.8956 82 254 1.10.3810.10
5hlaA04 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.8564 82 273 1.10.3810.10
3d3hA00 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.8417 80 272 1.10.3810.10
af_P02918_397_833_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8312 353 561 3.40.710.10
3d3hA00 Mainly Alpha;Orthogonal Bundle;Penicillin binding protein transpeptidase fold;Biosynthetic peptidoglycan transglycosylase-like 0.8278 80 272 1.10.3810.10
ID Description Score Start End GO Terms
AF-A0A4U0RT78-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.8801 37 651 GO:0004180
GO:0006508
GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-A0A6J6X4E7-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.8688 37 647 GO:0004180
GO:0006508
GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-A0A2W6E7C2-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.8638 58 528 GO:0004180
GO:0006508
GO:0008658
GO:0008955
GO:0009252
GO:0030288
AF-A0A401YRE6-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.8554 37 676 GO:0004180
GO:0006508
GO:0008658
GO:0008955
GO:0009252
GO:0016020
GO:0030288
AF-A0A6J6PR28-F1-model_v4 peptidoglycan glycosyltransferase (EC 2.4.99.28) 0.8549 37 648 GO:0004180
GO:0006508
GO:0008658
GO:0008955
GO:0009252
GO:0016020
GO:0030288

Map