F300424

General Info

Members Datasets Scaffolds Average Seq Length
195 147 390 305

Family's Representative Sequence

Representative Sequence 3300039062|Ga0400483_050720|Ga0400483_050720_4652_5677
Length 341
Sequence MIAVLVVAEIDRGRLRPNTFEALAAARRLDSDAEVTTLLCGPLDDQDEAAAALAHSGSTVVRQARHPLLSDYGPEAWGATVAQTIAELEPSVVLACGTGRGNEVLAQAAARLDLPFVANCVDLGADGRRPTRLQWGGSLLETVAVEAETLILSVAPFTFDPEPADGSAPDQAGLAPSFEPPTWETVEPDLDPTVARTMCVGRESAEAGVTLATAPVVFGGGRGVGSAEGFEVLERAAELLGGRVGCSRAVTNNGWRPHQDQIGQTGTRIAPDLYVASGISGAIQHWIGAAAAKKVLAINTDPDANMVTKSDYHVIGDLHEVLPAVVAELEARRRSAGQDGD

Samples

Sample ID Description Type Environment
1 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
84 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
85 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
86 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
87 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
88 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
93 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
94 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
95 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
96 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
97 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
98 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
99 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
100 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
101 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
105 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
106 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
107 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
110 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
111 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
112 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
113 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
114 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
118 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
119 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
120 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
121 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
122 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
135 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.03
Nodule 0
Rhizoplane 11.28
Rhizosphere 84.62
Stem 0
Stem Tuber 0
Unclassified 4.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400483_050720 3300039062 Bacteria 6240
2 Ga0070683_100015040 3300005329 Bacteria 6788
3 Ga0070689_100010955 3300005340 Bacteria 6478
4 Ga0070668_100002025 3300005347 Bacteria 14810
5 Ga0070669_100123970 3300005353 Unclassified 1975
6 Ga0070675_100035916 3300005354 Bacteria 4029
7 Ga0070671_100079497 3300005355 Bacteria 2741
8 Ga0070688_100004374 3300005365 Bacteria 7350
9 Ga0070659_100098459 3300005366 Bacteria 2352
10 Ga0070714_100023459 3300005435 Bacteria 5069
11 Ga0070714_100261870 3300005435 Bacteria 1601
12 Ga0070713_100093037 3300005436 Bacteria 2597
13 Ga0070711_100156917 3300005439 Archaea 1721
14 Ga0070700_100060593 3300005441 Bacteria 2386
15 Ga0070700_100284303 3300005441 Bacteria 1201
16 Ga0070708_100047364 3300005445 Bacteria 3797
17 Ga0070708_100198090 3300005445 Bacteria 1879
18 Ga0070708_100209783 3300005445 Unclassified 1825
19 Ga0070662_100003198 3300005457 Bacteria 10184
20 Ga0070681_10076143 3300005458 Bacteria 3314
21 Ga0068867_100192630 3300005459 Bacteria 1628
22 Ga0070706_100058422 3300005467 Unclassified 3559
23 Ga0070706_100081788 3300005467 Unclassified 2991
24 Ga0070706_100094592 3300005467 Bacteria 2773
25 Ga0070706_100154827 3300005467 Bacteria 2140
26 Ga0070707_100003229 3300005468 Bacteria 15441
27 Ga0070707_100010509 3300005468 Bacteria 8624
28 Ga0070707_100059625 3300005468 Bacteria 3660
29 Ga0070707_100248078 3300005468 Bacteria 1733
30 Ga0070698_100003605 3300005471 Bacteria 17018
31 Ga0070698_100011642 3300005471 Bacteria 9333
32 Ga0070698_100018841 3300005471 Bacteria 7262
33 Ga0070698_100077842 3300005471 Bacteria 3315
34 Ga0070698_100143864 3300005471 Bacteria 2334
35 Ga0070699_100000238 3300005518 Bacteria 53787
36 Ga0070699_100043949 3300005518 Bacteria 3867
37 Ga0070684_100029782 3300005535 Bacteria 4630
38 Ga0070697_100000005 3300005536 Bacteria 259746
39 Ga0070697_100002628 3300005536 Bacteria 13828
40 Ga0070697_100002696 3300005536 Bacteria 13675
41 Ga0070697_100111048 3300005536 Bacteria 2285
42 Ga0070672_100035835 3300005543 Bacteria 3773
43 Ga0070696_100070176 3300005546 Bacteria 2464
44 Ga0070696_100114766 3300005546 Bacteria 1943
45 Ga0070664_100171814 3300005564 Bacteria 1923
46 Ga0070702_100003407 3300005615 Bacteria 7107
47 Ga0068859_100156305 3300005617 Bacteria 2358
48 Ga0068861_100338156 3300005719 Bacteria 1317
49 Ga0081538_10000781 3300005981 Bacteria 34721
50 Ga0070717_10029655 3300006028 Unclassified 4391
51 Ga0070717_10034132 3300006028 Bacteria 4110
52 Ga0075365_10071299 3300006038 Bacteria 2339
53 Ga0075432_10019081 3300006058 Bacteria 2340
54 Ga0070716_100113899 3300006173 Archaea 1681
55 Ga0070712_100044525 3300006175 Bacteria 3060
56 Ga0070712_100121492 3300006175 Archaea 1965
57 Ga0075367_10045725 3300006178 Bacteria 2570
58 Ga0075428_100108501 3300006844 Bacteria 3025
59 Ga0075430_100001322 3300006846 Bacteria 20028
60 Ga0075431_100184414 3300006847 Bacteria 2141
61 Ga0075436_100102327 3300006914 Bacteria 1995
62 Ga0097620_100156305 3300006931 Bacteria 2358
63 Ga0111539_10020461 3300009094 Bacteria 8149
64 Ga0105245_10022541 3300009098 Bacteria 5528
65 Ga0105245_10023434 3300009098 Bacteria 5418
66 Ga0105245_10023724 3300009098 Bacteria 5385
67 Ga0114129_10002950 3300009147 Bacteria 23795
68 Ga0105243_10015279 3300009148 Bacteria 5808
69 Ga0105248_10021805 3300009177 Bacteria 7098
70 Ga0105237_10033011 3300009545 Bacteria 5242
71 Ga0105249_10004103 3300009553 Bacteria 12578
72 Ga0105246_10055585 3300011119 Bacteria 2732
73 Ga0157373_10044428 3300013100 Bacteria 3171
74 Ga0157370_10047782 3300013104 Bacteria 4101
75 Ga0157369_10136017 3300013105 Bacteria 2602
76 Ga0163161_10214784 3300017792 Bacteria 1487
77 Ga0207645_10055967 3300025907 Bacteria 2518
78 Ga0207643_10019342 3300025908 Bacteria 3732
79 Ga0207684_10014083 3300025910 Bacteria 6906
80 Ga0207684_10123180 3300025910 Bacteria 2224
81 Ga0207684_10181105 3300025910 Bacteria 1817
82 Ga0207671_10050215 3300025914 Bacteria 3089
83 Ga0207693_10068182 3300025915 Bacteria 2784
84 Ga0207646_10002493 3300025922 Bacteria 21743
85 Ga0207646_10002862 3300025922 Bacteria 20036
86 Ga0207646_10013508 3300025922 Bacteria 7805
87 Ga0207646_10022196 3300025922 Bacteria 5852
88 Ga0207694_10099308 3300025924 Bacteria 2305
89 Ga0207687_10034883 3300025927 Bacteria 3419
90 Ga0207700_10000549 3300025928 Bacteria 22010
91 Ga0207700_10197019 3300025928 Bacteria 1695
92 Ga0207664_10124350 3300025929 Bacteria 2163
93 Ga0207644_10220434 3300025931 Bacteria 1503
94 Ga0207690_10066086 3300025932 Bacteria 2475
95 Ga0207690_10266634 3300025932 Bacteria 1329
96 Ga0207706_10010693 3300025933 Bacteria 8383
97 Ga0207669_10109499 3300025937 Bacteria 1847
98 Ga0207691_10035339 3300025940 Bacteria 4639
99 Ga0207689_10239298 3300025942 Bacteria 1500
100 Ga0207661_10544967 3300025944 Bacteria 1062
101 Ga0207679_10314806 3300025945 Bacteria 1353
102 Ga0207667_10155542 3300025949 Bacteria 2353
103 Ga0207651_10060363 3300025960 Bacteria 2632
104 Ga0207708_10002626 3300026075 Bacteria 13211
105 Ga0207708_10053521 3300026075 Bacteria 3075
106 Ga0207675_100031867 3300026118 Bacteria 4911
107 Ga0268266_10149650 3300028379 Bacteria 2103
108 Ga0265338_10001577 3300028800 Bacteria 36745
109 Ga0307413_10207148 3300031824 Bacteria 1421
110 Ga0307410_10118988 3300031852 Bacteria 1923
111 Ga0307406_10040345 3300031901 Bacteria 2902
112 Ga0307407_10026496 3300031903 Bacteria 3071
113 Ga0307409_100223835 3300031995 Bacteria 1700
114 Ga0307411_10061282 3300032005 Bacteria 2504
115 Ga0373949_0005764 3300035090 Bacteria 2756
116 Ga0373952_0010152 3300035092 Bacteria 1816
117 Ga0373939_0038702 3300035114 Bacteria 1424
118 Ga0373961_0012370 3300035241 Bacteria 2136
119 Ga0316574_0112663 3300035398 Bacteria 1744
120 Ga0395900_0585229 3300037418 Bacteria 1058
121 Ga0436364_1347710 3300037853 Archaea 1453
122 Ga0395901_0749560 3300038443 Bacteria 970
123 Ga0400483_061146 3300039062 Bacteria 14295
124 Ga0400483_194199 3300039062 Bacteria 13731
125 Ga0400483_204991 3300039062 Bacteria 4558
126 Ga0450920_023602 3300042122 Unclassified 1193
127 Ga0451577_0084382 3300042876 Bacteria 2834
128 Ga0451577_0446075 3300042876 Bacteria 1175
129 Ga0466969_0098037 3300044656 Bacteria 1382
130 Ga0466966_0017059 3300044684 Bacteria 4802
131 Ga0466961_0073809 3300044693 Bacteria 2163
132 Ga0466963_0007988 3300044694 Bacteria 6333
133 Ga0466964_0030437 3300044706 Bacteria 2136
134 Ga0466968_0008174 3300044735 Bacteria 4001
135 Ga0466957_0126139 3300044842 Bacteria 1636
136 Ga0466959_0004242 3300045049 Bacteria 9563
137 Ga0451576_0219036 3300045051 Bacteria 1987
138 Ga0451576_0379617 3300045051 Bacteria 1481
139 Ga0466967_0001458 3300045976 Bacteria 13743
140 Ga0495651_0266134 3300046462 Bacteria 1164
141 Ga0495653_0240888 3300046463 Bacteria 1206
142 Ga0495630_0339036 3300046517 Bacteria 1150
143 Ga0495656_0187832 3300046615 Bacteria 1019
144 Ga0495658_0053297 3300046683 Bacteria 2297
145 Ga0495581_0080285 3300047315 Bacteria 1888
146 Ga0495676_0036453 3300047321 Bacteria 4107
147 Ga0496100_0038259 3300048903 Bacteria 3039
148 Ga0496100_0064707 3300048903 Bacteria 2421
149 Ga0496101_0177320 3300048904 Bacteria 1640
150 Ga0496102_0058990 3300048905 Bacteria 3508
151 Ga0496103_0085649 3300048906 Bacteria 1986
152 Ga0496104_0088873 3300048907 Bacteria 2952
153 Ga0496105_0016263 3300048908 Bacteria 5937
154 Ga0496105_0223351 3300048908 Bacteria 1533
155 Ga0496106_0092109 3300048909 Bacteria 2341
156 Ga0496107_0004071 3300048910 Bacteria 9846
157 Ga0496108_0007698 3300048911 Bacteria 8727
158 Ga0496109_0004805 3300048912 Bacteria 11278
159 Ga0496109_0123396 3300048912 Bacteria 2414
160 Ga0496110_0021867 3300048913 Bacteria 5423
161 Ga0496110_0026512 3300048913 Bacteria 4961
162 Ga0496110_0333197 3300048913 Bacteria 1383
163 Ga0496111_0093132 3300048914 Bacteria 2209
164 Ga0496112_0000775 3300048915 Bacteria 22490
165 Ga0496112_0021591 3300048915 Bacteria 6124
166 Ga0496113_0353803 3300048916 Bacteria 1178
167 Ga0496114_0016148 3300048917 Bacteria 6008
168 Ga0496115_0000930 3300048918 Bacteria 21216
169 Ga0496126_0018843 3300048929 Bacteria 6822
170 Ga0501033_0172771 3300049570 Bacteria 1552
171 Ga0501036_0099699 3300049572 Bacteria 2457
172 Ga0501039_0248215 3300049575 Bacteria 1400
173 Ga0501067_0004169 3300049583 Bacteria 7979
174 Ga0501067_0222497 3300049583 Bacteria 1051
175 Ga0501071_0109795 3300049587 Bacteria 2038
176 Ga0501072_0447323 3300049588 Unclassified 1023
177 Ga0501075_0027359 3300049591 Bacteria 4203
178 Ga0501076_0040419 3300049592 Bacteria 3666
179 Ga0501076_0174632 3300049592 Bacteria 1751
180 Ga0501079_0035875 3300049741 Bacteria 3818
181 Ga0501079_0308188 3300049741 Bacteria 1239
182 Ga0501080_0182114 3300049742 Bacteria 1933
183 Ga0501081_0047971 3300049743 Bacteria 2939
184 nmdc:mga05p37_1703_c1 3300050507 Bacteria 25614
185 nmdc:mga0qj67_19050_c1 3300050509 Bacteria 5239
186 nmdc:mga0qj67_331024_c1 3300050509 Unclassified 1232
187 nmdc:mga06r32_616183_c1 3300050510 Bacteria 1055
188 nmdc:mga08y16_25096_c1 3300050511 Bacteria 6287
189 nmdc:mga08y16_307747_c1 3300050511 Bacteria 1632
190 nmdc:mga0n895_120551_c1 3300050512 Bacteria 2644
191 nmdc:mga08x19_215088_c1 3300050514 Unclassified 1320
192 nmdc:mga0a205_46485_c1 3300050515 Bacteria 4186
193 Ga0501084_0326233 3300054114 Bacteria 1297
194 Ga0530510_0010903 3300061734 Bacteria 6375
195 Ga0530510_0253408 3300061734 Bacteria 1312
196 Ga0400483_050720
197 Ga0070683_100015040
198 Ga0070689_100010955
199 Ga0070668_100002025
200 Ga0070669_100123970
201 Ga0070675_100035916
202 Ga0070671_100079497
203 Ga0070688_100004374
204 Ga0070659_100098459
205 Ga0070714_100023459
206 Ga0070714_100261870
207 Ga0070713_100093037
208 Ga0070711_100156917
209 Ga0070700_100060593
210 Ga0070700_100284303
211 Ga0070708_100047364
212 Ga0070708_100198090
213 Ga0070708_100209783
214 Ga0070662_100003198
215 Ga0070681_10076143
216 Ga0068867_100192630
217 Ga0070706_100058422
218 Ga0070706_100081788
219 Ga0070706_100094592
220 Ga0070706_100154827
221 Ga0070707_100003229
222 Ga0070707_100010509
223 Ga0070707_100059625
224 Ga0070707_100248078
225 Ga0070698_100003605
226 Ga0070698_100011642
227 Ga0070698_100018841
228 Ga0070698_100077842
229 Ga0070698_100143864
230 Ga0070699_100000238
231 Ga0070699_100043949
232 Ga0070684_100029782
233 Ga0070697_100000005
234 Ga0070697_100002628
235 Ga0070697_100002696
236 Ga0070697_100111048
237 Ga0070672_100035835
238 Ga0070696_100070176
239 Ga0070696_100114766
240 Ga0070664_100171814
241 Ga0070702_100003407
242 Ga0068859_100156305
243 Ga0068861_100338156
244 Ga0081538_10000781
245 Ga0070717_10029655
246 Ga0070717_10034132
247 Ga0075365_10071299
248 Ga0075432_10019081
249 Ga0070716_100113899
250 Ga0070712_100044525
251 Ga0070712_100121492
252 Ga0075367_10045725
253 Ga0075428_100108501
254 Ga0075430_100001322
255 Ga0075431_100184414
256 Ga0075436_100102327
257 Ga0097620_100156305
258 Ga0111539_10020461
259 Ga0105245_10022541
260 Ga0105245_10023434
261 Ga0105245_10023724
262 Ga0114129_10002950
263 Ga0105243_10015279
264 Ga0105248_10021805
265 Ga0105237_10033011
266 Ga0105249_10004103
267 Ga0105246_10055585
268 Ga0157373_10044428
269 Ga0157370_10047782
270 Ga0157369_10136017
271 Ga0163161_10214784
272 Ga0207645_10055967
273 Ga0207643_10019342
274 Ga0207684_10014083
275 Ga0207684_10123180
276 Ga0207684_10181105
277 Ga0207671_10050215
278 Ga0207693_10068182
279 Ga0207646_10002493
280 Ga0207646_10002862
281 Ga0207646_10013508
282 Ga0207646_10022196
283 Ga0207694_10099308
284 Ga0207687_10034883
285 Ga0207700_10000549
286 Ga0207700_10197019
287 Ga0207664_10124350
288 Ga0207644_10220434
289 Ga0207690_10066086
290 Ga0207690_10266634
291 Ga0207706_10010693
292 Ga0207669_10109499
293 Ga0207691_10035339
294 Ga0207689_10239298
295 Ga0207661_10544967
296 Ga0207679_10314806
297 Ga0207667_10155542
298 Ga0207651_10060363
299 Ga0207708_10002626
300 Ga0207708_10053521
301 Ga0207675_100031867
302 Ga0268266_10149650
303 Ga0265338_10001577
304 Ga0307413_10207148
305 Ga0307410_10118988
306 Ga0307406_10040345
307 Ga0307407_10026496
308 Ga0307409_100223835
309 Ga0307411_10061282
310 Ga0373949_0005764
311 Ga0373952_0010152
312 Ga0373939_0038702
313 Ga0373961_0012370
314 Ga0316574_0112663
315 Ga0395900_0585229
316 Ga0436364_1347710
317 Ga0395901_0749560
318 Ga0400483_061146
319 Ga0400483_194199
320 Ga0400483_204991
321 Ga0450920_023602
322 Ga0451577_0084382
323 Ga0451577_0446075
324 Ga0466969_0098037
325 Ga0466966_0017059
326 Ga0466961_0073809
327 Ga0466963_0007988
328 Ga0466964_0030437
329 Ga0466968_0008174
330 Ga0466957_0126139
331 Ga0466959_0004242
332 Ga0451576_0219036
333 Ga0451576_0379617
334 Ga0466967_0001458
335 Ga0495651_0266134
336 Ga0495653_0240888
337 Ga0495630_0339036
338 Ga0495656_0187832
339 Ga0495658_0053297
340 Ga0495581_0080285
341 Ga0495676_0036453
342 Ga0496100_0038259
343 Ga0496100_0064707
344 Ga0496101_0177320
345 Ga0496102_0058990
346 Ga0496103_0085649
347 Ga0496104_0088873
348 Ga0496105_0016263
349 Ga0496105_0223351
350 Ga0496106_0092109
351 Ga0496107_0004071
352 Ga0496108_0007698
353 Ga0496109_0004805
354 Ga0496109_0123396
355 Ga0496110_0021867
356 Ga0496110_0026512
357 Ga0496110_0333197
358 Ga0496111_0093132
359 Ga0496112_0000775
360 Ga0496112_0021591
361 Ga0496113_0353803
362 Ga0496114_0016148
363 Ga0496115_0000930
364 Ga0496126_0018843
365 Ga0501033_0172771
366 Ga0501036_0099699
367 Ga0501039_0248215
368 Ga0501067_0004169
369 Ga0501067_0222497
370 Ga0501071_0109795
371 Ga0501072_0447323
372 Ga0501075_0027359
373 Ga0501076_0040419
374 Ga0501076_0174632
375 Ga0501079_0035875
376 Ga0501079_0308188
377 Ga0501080_0182114
378 Ga0501081_0047971
379 nmdc:mga05p37_1703_c1
380 nmdc:mga0qj67_19050_c1
381 nmdc:mga0qj67_331024_c1
382 nmdc:mga06r32_616183_c1
383 nmdc:mga08y16_25096_c1
384 nmdc:mga08y16_307747_c1
385 nmdc:mga0n895_120551_c1
386 nmdc:mga08x19_215088_c1
387 nmdc:mga0a205_46485_c1
388 Ga0501084_0326233
389 Ga0530510_0010903
390 Ga0530510_0253408

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00766

ETF_alpha

Electron transfer flavoprotein FAD-binding domain

210

290

0.98

PF01012

ETF

Electron transfer flavoprotein domain

4

175

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1t9g-assembly1.cif.gz_R structure of the human mcad:etf complex 0.893 1 163
1o95-assembly1.cif.gz_F ternary complex between trimethylamine dehydrogenase and electron transferring flavoprotein 0.8387 1 164
3fet-assembly2.cif.gz_B crystal structure of the electron transfer flavoprotein subunit alpha related protein ta0212 from thermoplasma acidophilum 0.8179 1 164
1o96-assembly3.cif.gz_E structure of electron transferring flavoprotein for methylophilus methylotrophus. 0.8111 1 158
1o97-assembly1.cif.gz_C structure of electron transferring flavoprotein from methylophilus methylotrophus, recognition loop removed by limited proteolysis 0.8077 1 167
ID Description Score Start End Superfamily
af_P9WNG9_187_318_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9698 181 309 3.40.50.1220
af_P77378_184_312_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9377 179 304 3.40.50.1220
af_P9WNG9_187_318_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9341 181 309 3.40.50.1220
af_Q46907_159_286_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9334 183 306 3.40.50.1220
af_P77378_184_312_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9099 179 304 3.40.50.1220
ID Description Score Start End GO Terms
AF-A0A357SYB5-F1-model_v4 Electron transfer flavoprotein subunit alpha 0.9935 208 290 GO:0009055
GO:0033539
GO:0050660
AF-A0A7V4G7F7-F1-model_v4 Electron transfer flavoprotein subunit alpha/FixB family protein 0.9917 204 306 GO:0009055
GO:0033539
GO:0050660
AF-A0A838S4U7-F1-model_v4 Electron transfer flavoprotein subunit alpha/FixB family protein 0.9915 211 307 GO:0009055
GO:0033539
GO:0050660
AF-A0A355RCY1-F1-model_v4 Electron transfer flavoprotein subunit alpha 0.991 198 303 GO:0009055
GO:0033539
GO:0050660
AF-A0A5C7TF32-F1-model_v4 deleted 0.9902 204 302

Map