F299031

General Info

Members Datasets Scaffolds Average Seq Length
194 148 388 562

Family's Representative Sequence

Representative Sequence 3300044673|Ga0453683_0001115|Ga0453683_0001115_8351_10282
Length 643
Sequence VNPSAFVFEVCASAAAAFASTDVLRIFQKQMRLLRLLPQDDSGENHAPCTPALASRIPLSMKSLPTRFGPALPSAVVLSFALLRATLVAESTAGAAPPPVNPSADSFAVSIQVDAAKSLGPVSPVWRFFGADEPNYATMKDGRKLLGELGELRTDHVYFRAHNLLNTGDGTPAFKWGSTNIYTEDAQGRPVYDWKIVDLMFDTYRARGVRPYLQLGFMPEALSTHPQPYQHEWRPGFNYNLISTGWAYPPKDYAKWAELVYQWTKHCVERYGQAEVEQWYFEVWNEPNGPAYWHGTQDEFNQLHDFAVDAVRRALPTARVGGPDVAGTGGAFMDAFLAHVARGKNYATGQTGTPTDFVSFHAKGSPVFVDGHVRMGIAAQLRTIDEGFAKIAAVPELKSKPIIIGESDPEGCAACQGPQNGYRNGTMYSSYTAAVFPRKIDLAARHGVNFEGALTWAFEFEDQRYFAGFRSLASNGLDLPVLNIFRMFAKMDGQRVAATSSGEVPLDAILKSGVREQPDVGARASLDGNKLNVLVWHYHEDDVPGPAAAIELAIAGLPVKGNAAALTQYRVDADHSNSYTAWQRLGSPLAPNEKDYAALEKAGKLTTTGAAETIALNHGTTSVRFSLPRQGVALLVFELAGSP

Samples

Sample ID Description Type Environment
1 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
72 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
73 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
74 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
75 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
76 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
77 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
78 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
79 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
80 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
81 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
82 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
83 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
84 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
88 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
91 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
92 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
93 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
94 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
95 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
96 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
97 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
98 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
99 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
100 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
101 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
102 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
103 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
104 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
105 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
106 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
107 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
108 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
109 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
110 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
111 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
115 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
116 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
117 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
118 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
123 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
124 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
125 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
126 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
127 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
128 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
129 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
130 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
145 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
147 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
148 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.48
Metatranscriptomes 0
Isolates 0.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.52
Nodule 0
Rhizoplane 0.52
Rhizosphere 94.85
Stem 0
Stem Tuber 0
Unclassified 4.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453683_0001115 3300044673 Bacteria 24523
2 rootH2_10018277 3300003320 Bacteria 4285
3 rootL2_10034590 3300003322 Bacteria 16749
4 Ga0070658_10000997 3300005327 Bacteria 24288
5 Ga0070658_10010573 3300005327 Bacteria 7395
6 Ga0070683_100030496 3300005329 Bacteria 4897
7 Ga0070683_100045476 3300005329 Bacteria 4051
8 Ga0070670_100019458 3300005331 Bacteria 5827
9 Ga0068869_100030838 3300005334 Bacteria 3768
10 Ga0068868_100103082 3300005338 Viruses 2311
11 Ga0070671_100044432 3300005355 Bacteria 3692
12 Ga0070674_100091589 3300005356 Unclassified 2196
13 Ga0070673_100057959 3300005364 Bacteria 3061
14 Ga0070667_100033907 3300005367 Bacteria 4270
15 Ga0070667_100096943 3300005367 Bacteria 2543
16 Ga0070714_100000042 3300005435 Bacteria 116805
17 Ga0070711_100006052 3300005439 Bacteria 7266
18 Ga0070705_100061725 3300005440 Bacteria 2229
19 Ga0070706_100009712 3300005467 Bacteria 8943
20 Ga0070698_100008401 3300005471 Bacteria 11157
21 Ga0070698_100021998 3300005471 Bacteria 6676
22 Ga0070699_100006037 3300005518 Bacteria 10591
23 Ga0070699_100028947 3300005518 Bacteria 4776
24 Ga0070679_100015843 3300005530 Bacteria 7255
25 Ga0070679_100066913 3300005530 Bacteria 3582
26 Ga0070684_100116049 3300005535 Bacteria 2405
27 Ga0070697_100017063 3300005536 Bacteria 5711
28 Ga0070697_100049583 3300005536 Unclassified 3408
29 Ga0070672_100092172 3300005543 Bacteria 2446
30 Ga0070672_100097139 3300005543 Bacteria 2384
31 Ga0070672_100111775 3300005543 Bacteria 2227
32 Ga0070672_100156651 3300005543 Bacteria 1887
33 Ga0070686_100000231 3300005544 Bacteria 38346
34 Ga0070686_100006390 3300005544 Bacteria 6547
35 Ga0070695_100086607 3300005545 Bacteria 2082
36 Ga0070693_100027298 3300005547 Bacteria 3093
37 Ga0068857_100022174 3300005577 Bacteria 5586
38 Ga0068856_100000331 3300005614 Bacteria 52026
39 Ga0068852_100076567 3300005616 Bacteria 2954
40 Ga0068858_100077209 3300005842 Bacteria 3094
41 Ga0097621_100030664 3300006237 Bacteria 4260
42 Ga0068871_100016301 3300006358 Bacteria 5592
43 Ga0075433_10024538 3300006852 Bacteria 5090
44 Ga0075434_100041806 3300006871 Bacteria 4542
45 Ga0068865_100110592 3300006881 Unclassified 2026
46 Ga0105247_10029297 3300009101 Bacteria 3335
47 Ga0114129_10024154 3300009147 Bacteria 8614
48 Ga0114129_10041155 3300009147 Bacteria 6513
49 Ga0105248_10001341 3300009177 Bacteria 27433
50 Ga0105238_10131072 3300009551 Bacteria 2485
51 Ga0105249_10032448 3300009553 Bacteria 4725
52 Ga0105239_10085134 3300010375 Bacteria 3483
53 Ga0105239_10160714 3300010375 Bacteria 2509
54 Ga0157374_10070042 3300013296 Unclassified 3303
55 Ga0163162_10000198 3300013306 Bacteria 55665
56 Ga0163162_10023591 3300013306 Bacteria 6074
57 Ga0157372_10032650 3300013307 Bacteria 5709
58 Ga0157372_10042095 3300013307 Bacteria 5051
59 Ga0163163_10035860 3300014325 Bacteria 4815
60 Ga0157380_10033790 3300014326 Bacteria 3941
61 Ga0157376_10018857 3300014969 Bacteria 5303
62 Ga0213875_10003427 3300021388 Bacteria 9026
63 Ga0207653_10007149 3300025885 Bacteria 3487
64 Ga0207710_10012932 3300025900 Bacteria 3515
65 Ga0207643_10013617 3300025908 Bacteria 4407
66 Ga0207705_10000049 3300025909 Bacteria 170616
67 Ga0207705_10002057 3300025909 Bacteria 15639
68 Ga0207684_10016871 3300025910 Bacteria 6271
69 Ga0207707_10120299 3300025912 Unclassified 2295
70 Ga0207663_10008232 3300025916 Bacteria 5441
71 Ga0207652_10017849 3300025921 Bacteria 5813
72 Ga0207646_10004126 3300025922 Bacteria 15956
73 Ga0207650_10035179 3300025925 Bacteria 3635
74 Ga0207664_10000037 3300025929 Bacteria 171467
75 Ga0207644_10033818 3300025931 Bacteria 3575
76 Ga0207669_10002051 3300025937 Bacteria 8527
77 Ga0207691_10026648 3300025940 Bacteria 5423
78 Ga0207691_10108265 3300025940 Bacteria 2473
79 Ga0207691_10156355 3300025940 Bacteria 2002
80 Ga0207691_10167372 3300025940 Bacteria 1926
81 Ga0207689_10019914 3300025942 Bacteria 5651
82 Ga0207639_10076170 3300026041 Bacteria 2640
83 Ga0207708_10048200 3300026075 Bacteria 3243
84 Ga0207702_10000091 3300026078 Bacteria 104021
85 Ga0207648_10026575 3300026089 Bacteria 5141
86 Ga0207674_10055889 3300026116 Bacteria 4010
87 Ga0207675_100006091 3300026118 Bacteria 11474
88 Ga0207683_10029677 3300026121 Bacteria 4736
89 Ga0268264_10070278 3300028381 Bacteria 2964
90 Ga0265326_10004722 3300028558 Unclassified 4343
91 Ga0265319_1000376 3300028563 Bacteria 32311
92 Ga0265319_1004872 3300028563 Bacteria 6564
93 Ga0265334_10000682 3300028573 Bacteria 16997
94 Ga0265318_10000047 3300028577 Bacteria 123944
95 Ga0265318_10000646 3300028577 Bacteria 23828
96 Ga0265318_10004827 3300028577 Bacteria 6444
97 Ga0265323_10000009 3300028653 Bacteria 115038
98 Ga0265323_10000934 3300028653 Bacteria 15341
99 Ga0265323_10001341 3300028653 Bacteria 12179
100 Ga0265323_10002651 3300028653 Bacteria 8085
101 Ga0265322_10001030 3300028654 Bacteria 9675
102 Ga0265322_10002337 3300028654 Bacteria 5868
103 Ga0307515_10000026 3300028794 Bacteria 382411
104 Ga0307515_10068993 3300028794 Bacteria 4844
105 Ga0265338_10000053 3300028800 Bacteria 208184
106 Ga0265338_10000160 3300028800 Bacteria 122713
107 Ga0265338_10034343 3300028800 Bacteria 4903
108 Ga0307511_10000348 3300030521 Bacteria 49134
109 Ga0265330_10022942 3300031235 Bacteria 2836
110 Ga0265320_10000563 3300031240 Bacteria 28636
111 Ga0265320_10003325 3300031240 Bacteria 10843
112 Ga0265320_10042531 3300031240 Bacteria 2253
113 Ga0265325_10059388 3300031241 Bacteria 1944
114 Ga0265329_10009897 3300031242 Bacteria 3529
115 Ga0265331_10015791 3300031250 Bacteria 3978
116 Ga0265327_10001596 3300031251 Bacteria 27613
117 Ga0265327_10022338 3300031251 Bacteria 3787
118 Ga0265316_10001540 3300031344 Bacteria 24717
119 Ga0265313_10004003 3300031595 Bacteria 11534
120 Ga0265313_10005797 3300031595 Bacteria 8974
121 Ga0307508_10000055 3300031616 Bacteria 126914
122 Ga0265314_10001159 3300031711 Bacteria 30367
123 Ga0265314_10002121 3300031711 Bacteria 20819
124 Ga0265342_10001884 3300031712 Bacteria 18908
125 Ga0265342_10007399 3300031712 Bacteria 8043
126 Ga0316576_10015221 3300031727 Bacteria 5158
127 Ga0307413_10038249 3300031824 Bacteria 2779
128 Ga0307407_10004040 3300031903 Bacteria 6152
129 Ga0373928_0000006 3300035084 Bacteria 35306
130 Ga0373934_0002246 3300035086 Bacteria 7097
131 Ga0373934_0013870 3300035086 Bacteria 3049
132 Ga0373944_0000110 3300035089 Bacteria 15108
133 Ga0373949_0001855 3300035090 Bacteria 5745
134 Ga0373932_0000002 3300035112 Bacteria 711821
135 Ga0373936_0008073 3300035113 Bacteria 3956
136 Ga0373945_0002761 3300035116 Bacteria 5512
137 Ga0373954_0000325 3300035118 Bacteria 17490
138 Ga0373956_0000859 3300035119 Bacteria 12650
139 Ga0373943_0000471 3300035170 Bacteria 17125
140 Ga0373955_0077323 3300035172 Bacteria 1873
141 Ga0373962_0000139 3300035242 Bacteria 14973
142 Ga0373931_0000025 3300035691 Bacteria 129499
143 Ga0373933_0000193 3300035724 Bacteria 40441
144 Ga0373947_0000120 3300035725 Bacteria 39585
145 Ga0373947_0034150 3300035725 Bacteria 3008
146 Ga0373937_0000407 3300036401 Bacteria 40117
147 Ga0316584_0025307 3300036712 Bacteria 4352
148 Ga0373925_0000059 3300037068 Bacteria 120259
149 Ga0373925_0000827 3300037068 Bacteria 28535
150 Ga0395899_0071071 3300037312 Bacteria 2547
151 Ga0395900_0114862 3300037418 Bacteria 2763
152 Ga0395905_0167781 3300037471 Unclassified 2063
153 Ga0436364_1319973 3300037853 Bacteria 21677
154 Ga0436360_1044826 3300039438 Bacteria 1643
155 Ga0453684_0010117 3300044712 Bacteria 16204
156 Ga0453684_0185874 3300044712 Bacteria 2435
157 Ga0451576_0005123 3300045051 Bacteria 16606
158 Ga0451576_0006657 3300045051 Bacteria 14101
159 Ga0451576_0057246 3300045051 Bacteria 4075
160 Ga0451576_0091141 3300045051 Unclassified 3171
161 Ga0466967_0043957 3300045976 Bacteria 3871
162 Ga0495592_0106356 3300046454 Bacteria 1992
163 Ga0495628_0087598 3300046516 Bacteria 2414
164 Ga0495630_0000051 3300046517 Bacteria 95456
165 Ga0495586_0000041 3300046535 Bacteria 78799
166 Ga0495587_0002799 3300046536 Bacteria 11659
167 Ga0495634_0039550 3300046642 Bacteria 3211
168 Ga0495658_0003039 3300046683 Bacteria 8402
169 Ga0495604_0002455 3300047317 Bacteria 14823
170 Ga0495674_0000087 3300047319 Bacteria 65109
171 Ga0495676_0017039 3300047321 Bacteria 6430
172 Ga0495602_0077033 3300048088 Bacteria 2823
173 Ga0496115_0076650 3300048918 Bacteria 2718
174 Ga0501031_0018227 3300049568 Bacteria 4569
175 Ga0501032_0001332 3300049569 Bacteria 19702
176 Ga0501036_0063880 3300049572 Bacteria 3117
177 Ga0501042_0098349 3300049578 Bacteria 2104
178 Ga0501043_0041393 3300049579 Bacteria 3620
179 Ga0501046_0027216 3300049580 Bacteria 4668
180 Ga0501047_0048325 3300049581 Bacteria 4108
181 Ga0501047_0133200 3300049581 Bacteria 2365
182 Ga0501047_0156451 3300049581 Bacteria 2153
183 Ga0501048_0054864 3300049582 Bacteria 2831
184 Ga0501070_0110509 3300049586 Bacteria 2271
185 Ga0501076_0002581 3300049592 Bacteria 12453
186 Ga0501035_0000475 3300049822 Bacteria 45010
187 Ga0501044_0000080 3300049823 Bacteria 116837
188 Ga0501044_0002372 3300049823 Bacteria 21454
189 Ga0501044_0086995 3300049823 Bacteria 3156
190 nmdc:mga05p37_312740_c1 3300050507 Bacteria 1861
191 nmdc:mga0n895_31566_c1 3300050512 Bacteria 5073
192 nmdc:mga0a205_21802_c1 3300050515 Bacteria 6058
193 Ga0500645_000967 3300053730 Bacteria 16318
194 2889419148 2889415604 Bacteria 8048700
195 Ga0453683_0001115
196 rootH2_10018277
197 rootL2_10034590
198 Ga0070658_10000997
199 Ga0070658_10010573
200 Ga0070683_100030496
201 Ga0070683_100045476
202 Ga0070670_100019458
203 Ga0068869_100030838
204 Ga0068868_100103082
205 Ga0070671_100044432
206 Ga0070674_100091589
207 Ga0070673_100057959
208 Ga0070667_100033907
209 Ga0070667_100096943
210 Ga0070714_100000042
211 Ga0070711_100006052
212 Ga0070705_100061725
213 Ga0070706_100009712
214 Ga0070698_100008401
215 Ga0070698_100021998
216 Ga0070699_100006037
217 Ga0070699_100028947
218 Ga0070679_100015843
219 Ga0070679_100066913
220 Ga0070684_100116049
221 Ga0070697_100017063
222 Ga0070697_100049583
223 Ga0070672_100092172
224 Ga0070672_100097139
225 Ga0070672_100111775
226 Ga0070672_100156651
227 Ga0070686_100000231
228 Ga0070686_100006390
229 Ga0070695_100086607
230 Ga0070693_100027298
231 Ga0068857_100022174
232 Ga0068856_100000331
233 Ga0068852_100076567
234 Ga0068858_100077209
235 Ga0097621_100030664
236 Ga0068871_100016301
237 Ga0075433_10024538
238 Ga0075434_100041806
239 Ga0068865_100110592
240 Ga0105247_10029297
241 Ga0114129_10024154
242 Ga0114129_10041155
243 Ga0105248_10001341
244 Ga0105238_10131072
245 Ga0105249_10032448
246 Ga0105239_10085134
247 Ga0105239_10160714
248 Ga0157374_10070042
249 Ga0163162_10000198
250 Ga0163162_10023591
251 Ga0157372_10032650
252 Ga0157372_10042095
253 Ga0163163_10035860
254 Ga0157380_10033790
255 Ga0157376_10018857
256 Ga0213875_10003427
257 Ga0207653_10007149
258 Ga0207710_10012932
259 Ga0207643_10013617
260 Ga0207705_10000049
261 Ga0207705_10002057
262 Ga0207684_10016871
263 Ga0207707_10120299
264 Ga0207663_10008232
265 Ga0207652_10017849
266 Ga0207646_10004126
267 Ga0207650_10035179
268 Ga0207664_10000037
269 Ga0207644_10033818
270 Ga0207669_10002051
271 Ga0207691_10026648
272 Ga0207691_10108265
273 Ga0207691_10156355
274 Ga0207691_10167372
275 Ga0207689_10019914
276 Ga0207639_10076170
277 Ga0207708_10048200
278 Ga0207702_10000091
279 Ga0207648_10026575
280 Ga0207674_10055889
281 Ga0207675_100006091
282 Ga0207683_10029677
283 Ga0268264_10070278
284 Ga0265326_10004722
285 Ga0265319_1000376
286 Ga0265319_1004872
287 Ga0265334_10000682
288 Ga0265318_10000047
289 Ga0265318_10000646
290 Ga0265318_10004827
291 Ga0265323_10000009
292 Ga0265323_10000934
293 Ga0265323_10001341
294 Ga0265323_10002651
295 Ga0265322_10001030
296 Ga0265322_10002337
297 Ga0307515_10000026
298 Ga0307515_10068993
299 Ga0265338_10000053
300 Ga0265338_10000160
301 Ga0265338_10034343
302 Ga0307511_10000348
303 Ga0265330_10022942
304 Ga0265320_10000563
305 Ga0265320_10003325
306 Ga0265320_10042531
307 Ga0265325_10059388
308 Ga0265329_10009897
309 Ga0265331_10015791
310 Ga0265327_10001596
311 Ga0265327_10022338
312 Ga0265316_10001540
313 Ga0265313_10004003
314 Ga0265313_10005797
315 Ga0307508_10000055
316 Ga0265314_10001159
317 Ga0265314_10002121
318 Ga0265342_10001884
319 Ga0265342_10007399
320 Ga0316576_10015221
321 Ga0307413_10038249
322 Ga0307407_10004040
323 Ga0373928_0000006
324 Ga0373934_0002246
325 Ga0373934_0013870
326 Ga0373944_0000110
327 Ga0373949_0001855
328 Ga0373932_0000002
329 Ga0373936_0008073
330 Ga0373945_0002761
331 Ga0373954_0000325
332 Ga0373956_0000859
333 Ga0373943_0000471
334 Ga0373955_0077323
335 Ga0373962_0000139
336 Ga0373931_0000025
337 Ga0373933_0000193
338 Ga0373947_0000120
339 Ga0373947_0034150
340 Ga0373937_0000407
341 Ga0316584_0025307
342 Ga0373925_0000059
343 Ga0373925_0000827
344 Ga0395899_0071071
345 Ga0395900_0114862
346 Ga0395905_0167781
347 Ga0436364_1319973
348 Ga0436360_1044826
349 Ga0453684_0010117
350 Ga0453684_0185874
351 Ga0451576_0005123
352 Ga0451576_0006657
353 Ga0451576_0057246
354 Ga0451576_0091141
355 Ga0466967_0043957
356 Ga0495592_0106356
357 Ga0495628_0087598
358 Ga0495630_0000051
359 Ga0495586_0000041
360 Ga0495587_0002799
361 Ga0495634_0039550
362 Ga0495658_0003039
363 Ga0495604_0002455
364 Ga0495674_0000087
365 Ga0495676_0017039
366 Ga0495602_0077033
367 Ga0496115_0076650
368 Ga0501031_0018227
369 Ga0501032_0001332
370 Ga0501036_0063880
371 Ga0501042_0098349
372 Ga0501043_0041393
373 Ga0501046_0027216
374 Ga0501047_0048325
375 Ga0501047_0133200
376 Ga0501047_0156451
377 Ga0501048_0054864
378 Ga0501070_0110509
379 Ga0501076_0002581
380 Ga0501035_0000475
381 Ga0501044_0000080
382 Ga0501044_0002372
383 Ga0501044_0086995
384 nmdc:mga05p37_312740_c1
385 nmdc:mga0n895_31566_c1
386 nmdc:mga0a205_21802_c1
387 Ga0500645_000967
388 2889419148

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01229

Glyco_hydro_39

Glycosyl hydrolases family 39

109

615

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4m29-assembly1.cif.gz_A structure of a gh39 beta-xylosidase from caulobacter crescentus 0.8237 50 562
2bfg-assembly2.cif.gz_H crystal structure of beta-xylosidase (fam gh39) in complex with dinitrophenyl-beta-xyloside and covalently bound xyloside 0.8177 57 560
1px8-assembly1.cif.gz_A crystal structure of beta-d-xylosidase from thermoanaerobacterium saccharolyticum, a family 39 glycoside hydrolase 0.8165 52 564
4m29-assembly1.cif.gz_A structure of a gh39 beta-xylosidase from caulobacter crescentus 0.8152 50 562
2bs9-assembly2.cif.gz_E native crystal structure of a gh39 beta-xylosidase xynb1 from geobacillus stearothermophilus 0.8133 52 560
ID Description Score Start End Superfamily
4m29A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8592 63 429 3.20.20.80
af_Q54J53_42_361_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8474 64 433 3.20.20.80
4m29A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8442 63 429 3.20.20.80
1w91B02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8433 62 433 3.20.20.80
1w91B02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.841 62 433 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A4Q2YWS1-F1-model_v4 Beta-xylosidase 0.9867 45 429 GO:0004553
GO:0005975
AF-A0A4U0WCS5-F1-model_v4 BTB domain-containing protein 0.9724 61 486 GO:0004553
AF-A0A4Q3D5I0-F1-model_v4 Beta-xylosidase 0.9672 149 474 GO:0004553
GO:0005975
AF-A0A4Q2ZB36-F1-model_v4 Beta-xylosidase 0.9657 25 392 GO:0004553
AF-A0A059WUF6-F1-model_v4 Glycosyl hydrolases family 39 0.9636 49 395 GO:0004553

Map