F298416
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 194 | 124 | 194 | 471 |
Family's Representative Sequence
| Representative Sequence | 3300005842|Ga0068858_100124600|Ga0068858_1001246003 |
| Length | 494 |
| Sequence | MHVIDRVRRFIRHHALMGADTRVAVALSGGSDSVALAHIVRALAAAGELKAAGFAHFNHQLRDAADRDERFCADLAASFGWPLRLEREDVGARARRERRSIEDAARTARYGFFERARVQLDADVVALGHTRDDQAETVLLRLLRGAGPRGLAAIHPRHGSVVRPLLSCRRQELRDDLAERGASYVEDESNTDVSIPRNRVRAELLPLLEARFNPAIVDVLADEAELARGTWQWMESQADELTLRSLRPQGSHEDRLAHEAGGAGLKSVAKEIRQFDVATLNAAPLALRRLVVWRAMSEAAAGRPVAFDHVEAALELMQSSEDGGLDAPGQRVDLHGLDLVLTSRPAGTHGRGPQPISNLFDYPLSIPGEVPLPNAGCVLSAEASPAGAIDPRTMAPDAAVAVVRRDLCNGPLRVRNRRPGDRFRPIGVDGRKKLQDFFVDRKVTRHRRDIVPLVVDETDRIVWVAGYGIDEAFRVTDPAQGVLILRLKLLGGSA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 2 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 4 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 7 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 14 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 21 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 27 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 29 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 30 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 31 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 32 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 33 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 34 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 35 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 37 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 38 | 3300006852 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Metagenome | Rhizosphere |
| 39 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 40 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 41 | 3300006914 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Metagenome | Rhizosphere |
| 42 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 44 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 85 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 86 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 87 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 88 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 89 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 90 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 91 | 3300042156 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 | Metagenome | Rhizosphere |
| 92 | 3300042436 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 | Metagenome | Rhizosphere |
| 93 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 94 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046514 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046681 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 112 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 113 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 114 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 118 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050515 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 2.06 |
| Rhizosphere | 97.94 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0065707_10009688 | 3300005295 | Bacteria | 3396 |
| 2 | Ga0070676_10002816 | 3300005328 | Bacteria | 8992 |
| 3 | Ga0068869_100119534 | 3300005334 | Bacteria | 2014 |
| 4 | Ga0070666_10075221 | 3300005335 | Bacteria | 2303 |
| 5 | Ga0070680_100063054 | 3300005336 | Bacteria | 3036 |
| 6 | Ga0068868_100074601 | 3300005338 | Bacteria | 2709 |
| 7 | Ga0070691_10001036 | 3300005341 | Bacteria | 11430 |
| 8 | Ga0070669_100004259 | 3300005353 | Bacteria | 10331 |
| 9 | Ga0070675_100000147 | 3300005354 | Bacteria | 42295 |
| 10 | Ga0070671_100001353 | 3300005355 | Bacteria | 18364 |
| 11 | Ga0070674_100004114 | 3300005356 | Bacteria | 8261 |
| 12 | Ga0070673_100036797 | 3300005364 | Bacteria | 3725 |
| 13 | Ga0070688_100034710 | 3300005365 | Bacteria | 3058 |
| 14 | Ga0070701_10012580 | 3300005438 | Bacteria | 3822 |
| 15 | Ga0070705_100002967 | 3300005440 | Bacteria | 8387 |
| 16 | Ga0070700_100007688 | 3300005441 | Bacteria | 5834 |
| 17 | Ga0070708_100169148 | 3300005445 | Bacteria | 2040 |
| 18 | Ga0070707_100065109 | 3300005468 | Bacteria | 3500 |
| 19 | Ga0070707_100101243 | 3300005468 | Bacteria | 2792 |
| 20 | Ga0070707_100141190 | 3300005468 | Bacteria | 2344 |
| 21 | Ga0070699_100001909 | 3300005518 | Bacteria | 18820 |
| 22 | Ga0070697_100113061 | 3300005536 | Bacteria | 2265 |
| 23 | Ga0070672_100035734 | 3300005543 | Bacteria | 3778 |
| 24 | Ga0070695_100007855 | 3300005545 | Bacteria | 6319 |
| 25 | Ga0070696_100019788 | 3300005546 | Bacteria | 4562 |
| 26 | Ga0070696_100077330 | 3300005546 | Bacteria | 2351 |
| 27 | Ga0070665_100030592 | 3300005548 | Bacteria | 5415 |
| 28 | Ga0070704_100001892 | 3300005549 | Bacteria | 11542 |
| 29 | Ga0070704_100083911 | 3300005549 | Bacteria | 2353 |
| 30 | Ga0070704_100210380 | 3300005549 | Bacteria | 1575 |
| 31 | Ga0068856_100014808 | 3300005614 | Bacteria | 7529 |
| 32 | Ga0068856_100165908 | 3300005614 | Bacteria | 2220 |
| 33 | Ga0070702_100010598 | 3300005615 | Bacteria | 4548 |
| 34 | Ga0068859_100050521 | 3300005617 | Bacteria | 4177 |
| 35 | Ga0068859_100077211 | 3300005617 | Bacteria | 3371 |
| 36 | Ga0068859_100243578 | 3300005617 | Bacteria | 1887 |
| 37 | Ga0068864_100016823 | 3300005618 | Bacteria | 6094 |
| 38 | Ga0068864_100026062 | 3300005618 | Bacteria | 4928 |
| 39 | Ga0068864_100138868 | 3300005618 | Bacteria | 2190 |
| 40 | Ga0068861_100002556 | 3300005719 | Bacteria | 11896 |
| 41 | Ga0068861_100142881 | 3300005719 | Bacteria | 1955 |
| 42 | Ga0068863_100002769 | 3300005841 | Bacteria | 17372 |
| 43 | Ga0068858_100004497 | 3300005842 | Bacteria | 13660 |
| 44 | Ga0068858_100037236 | 3300005842 | Bacteria | 4511 |
| 45 | Ga0068858_100124600 | 3300005842 | Bacteria | 2412 |
| 46 | Ga0068858_100183919 | 3300005842 | Bacteria | 1974 |
| 47 | Ga0068858_100243053 | 3300005842 | Bacteria | 1708 |
| 48 | Ga0068860_100141270 | 3300005843 | Bacteria | 2314 |
| 49 | Ga0068862_100087766 | 3300005844 | Bacteria | 2705 |
| 50 | Ga0097621_100000391 | 3300006237 | Bacteria | 30518 |
| 51 | Ga0097621_100001463 | 3300006237 | Bacteria | 16164 |
| 52 | Ga0068871_100014278 | 3300006358 | Bacteria | 5917 |
| 53 | Ga0075431_100123365 | 3300006847 | Bacteria | 2673 |
| 54 | Ga0075433_10024234 | 3300006852 | Bacteria | 5119 |
| 55 | Ga0075433_10086636 | 3300006852 | Bacteria | 2766 |
| 56 | Ga0075434_100000097 | 3300006871 | Bacteria | 48724 |
| 57 | Ga0075434_100008883 | 3300006871 | Bacteria | 9355 |
| 58 | Ga0075434_100116680 | 3300006871 | Bacteria | 2683 |
| 59 | Ga0068865_100007396 | 3300006881 | Bacteria | 6758 |
| 60 | Ga0075436_100000341 | 3300006914 | Bacteria | 29776 |
| 61 | Ga0075436_100012951 | 3300006914 | Bacteria | 5718 |
| 62 | Ga0097620_100050520 | 3300006931 | Bacteria | 4177 |
| 63 | Ga0097620_100077211 | 3300006931 | Bacteria | 3371 |
| 64 | Ga0097620_100243579 | 3300006931 | Bacteria | 1887 |
| 65 | Ga0075435_100000149 | 3300007076 | Bacteria | 39747 |
| 66 | Ga0075435_100000353 | 3300007076 | Bacteria | 28240 |
| 67 | Ga0075435_100016083 | 3300007076 | Bacteria | 5635 |
| 68 | Ga0075435_100051034 | 3300007076 | Bacteria | 3331 |
| 69 | Ga0105240_10006658 | 3300009093 | Bacteria | 16939 |
| 70 | Ga0105240_10033201 | 3300009093 | Bacteria | 6671 |
| 71 | Ga0105240_10057740 | 3300009093 | Bacteria | 4846 |
| 72 | Ga0111539_10231518 | 3300009094 | Bacteria | 2151 |
| 73 | Ga0105245_10091279 | 3300009098 | Bacteria | 2803 |
| 74 | Ga0114129_10001588 | 3300009147 | Bacteria | 30837 |
| 75 | Ga0114129_10003979 | 3300009147 | Bacteria | 20871 |
| 76 | Ga0114129_10007344 | 3300009147 | Bacteria | 15689 |
| 77 | Ga0114129_10014381 | 3300009147 | Bacteria | 11281 |
| 78 | Ga0114129_10019030 | 3300009147 | Bacteria | 9782 |
| 79 | Ga0114129_10064903 | 3300009147 | Bacteria | 5096 |
| 80 | Ga0114129_10125326 | 3300009147 | Bacteria | 3532 |
| 81 | Ga0114129_10351610 | 3300009147 | Bacteria | 1952 |
| 82 | Ga0105242_10019454 | 3300009176 | Bacteria | 5321 |
| 83 | Ga0105242_10023674 | 3300009176 | Bacteria | 4841 |
| 84 | Ga0105242_10063095 | 3300009176 | Bacteria | 3051 |
| 85 | Ga0105248_10007182 | 3300009177 | Bacteria | 12221 |
| 86 | Ga0105248_10059775 | 3300009177 | Bacteria | 4282 |
| 87 | Ga0105248_10064612 | 3300009177 | Bacteria | 4108 |
| 88 | Ga0105248_10074207 | 3300009177 | Bacteria | 3823 |
| 89 | Ga0105248_10095078 | 3300009177 | Bacteria | 3355 |
| 90 | Ga0105249_10148381 | 3300009553 | Bacteria | 2255 |
| 91 | Ga0157369_10160490 | 3300013105 | Bacteria | 2373 |
| 92 | Ga0157374_10052970 | 3300013296 | Bacteria | 3781 |
| 93 | Ga0163162_10150972 | 3300013306 | Bacteria | 2441 |
| 94 | Ga0157375_10092990 | 3300013308 | Bacteria | 3081 |
| 95 | Ga0163163_10003243 | 3300014325 | Bacteria | 13792 |
| 96 | Ga0163163_10008769 | 3300014325 | Bacteria | 9000 |
| 97 | Ga0157380_10098505 | 3300014326 | Bacteria | 2429 |
| 98 | Ga0157379_10007571 | 3300014968 | Bacteria | 9403 |
| 99 | Ga0157376_10046597 | 3300014969 | Bacteria | 3576 |
| 100 | Ga0157376_10078298 | 3300014969 | Bacteria | 2830 |
| 101 | Ga0207680_10019566 | 3300025903 | Bacteria | 3623 |
| 102 | Ga0207645_10000374 | 3300025907 | Bacteria | 37092 |
| 103 | Ga0207695_10049166 | 3300025913 | Bacteria | 4447 |
| 104 | Ga0207695_10065549 | 3300025913 | Bacteria | 3734 |
| 105 | Ga0207695_10090504 | 3300025913 | Bacteria | 3075 |
| 106 | Ga0207657_10000448 | 3300025919 | Bacteria | 43812 |
| 107 | Ga0207681_10011173 | 3300025923 | Bacteria | 5513 |
| 108 | Ga0207650_10112825 | 3300025925 | Bacteria | 2106 |
| 109 | Ga0207659_10000075 | 3300025926 | Bacteria | 63221 |
| 110 | Ga0207687_10020938 | 3300025927 | Bacteria | 4341 |
| 111 | Ga0207644_10013494 | 3300025931 | Bacteria | 5449 |
| 112 | Ga0207709_10030298 | 3300025935 | Bacteria | 3146 |
| 113 | Ga0207704_10017021 | 3300025938 | Bacteria | 3756 |
| 114 | Ga0207691_10044626 | 3300025940 | Bacteria | 4079 |
| 115 | Ga0207691_10099127 | 3300025940 | Bacteria | 2602 |
| 116 | Ga0207711_10013002 | 3300025941 | Bacteria | 6913 |
| 117 | Ga0207711_10036319 | 3300025941 | Bacteria | 4181 |
| 118 | Ga0207711_10036656 | 3300025941 | Bacteria | 4162 |
| 119 | Ga0207711_10088243 | 3300025941 | Bacteria | 2722 |
| 120 | Ga0207661_10051938 | 3300025944 | Bacteria | 3273 |
| 121 | Ga0207651_10005343 | 3300025960 | Bacteria | 6587 |
| 122 | Ga0207651_10113999 | 3300025960 | Unclassified | 2035 |
| 123 | Ga0207712_10049441 | 3300025961 | Bacteria | 2930 |
| 124 | Ga0207668_10036342 | 3300025972 | Bacteria | 3286 |
| 125 | Ga0207658_10123865 | 3300025986 | Bacteria | 2066 |
| 126 | Ga0207703_10054441 | 3300026035 | Bacteria | 3254 |
| 127 | Ga0207703_10081096 | 3300026035 | Bacteria | 2703 |
| 128 | Ga0207703_10170331 | 3300026035 | Bacteria | 1915 |
| 129 | Ga0207708_10002808 | 3300026075 | Bacteria | 12801 |
| 130 | Ga0207708_10044313 | 3300026075 | Bacteria | 3390 |
| 131 | Ga0207641_10014394 | 3300026088 | Bacteria | 6482 |
| 132 | Ga0207648_10104543 | 3300026089 | Bacteria | 2483 |
| 133 | Ga0207676_10053771 | 3300026095 | Bacteria | 3152 |
| 134 | Ga0207676_10201919 | 3300026095 | Unclassified | 1757 |
| 135 | Ga0207675_100003224 | 3300026118 | Bacteria | 15999 |
| 136 | Ga0268265_10055972 | 3300028380 | Bacteria | 2999 |
| 137 | Ga0307410_10060976 | 3300031852 | Bacteria | 2580 |
| 138 | Ga0307406_10042739 | 3300031901 | Bacteria | 2831 |
| 139 | Ga0307407_10128550 | 3300031903 | Bacteria | 1617 |
| 140 | Ga0307409_100049846 | 3300031995 | Bacteria | 3195 |
| 141 | Ga0307416_100011757 | 3300032002 | Bacteria | 5862 |
| 142 | Ga0373937_0047270 | 3300036401 | Bacteria | 3937 |
| 143 | Ga0373925_0114322 | 3300037068 | Bacteria | 2089 |
| 144 | Ga0439446_0018271 | 3300042156 | Bacteria | 1963 |
| 145 | Ga0439435_0012328 | 3300042436 | Unclassified | 2069 |
| 146 | Ga0466963_0149133 | 3300044694 | Bacteria | 1623 |
| 147 | Ga0495592_0024896 | 3300046454 | Bacteria | 4548 |
| 148 | Ga0495603_0027897 | 3300046455 | Bacteria | 3405 |
| 149 | Ga0495662_0064435 | 3300046476 | Bacteria | 1771 |
| 150 | Ga0495664_0040007 | 3300046477 | Bacteria | 2771 |
| 151 | Ga0495608_0000803 | 3300046511 | Bacteria | 22031 |
| 152 | Ga0495618_0057940 | 3300046514 | Bacteria | 2453 |
| 153 | Ga0495628_0022437 | 3300046516 | Bacteria | 5184 |
| 154 | Ga0495645_0003365 | 3300046543 | Bacteria | 10837 |
| 155 | Ga0495667_0082654 | 3300046559 | Bacteria | 2086 |
| 156 | Ga0495634_0032917 | 3300046642 | Bacteria | 3563 |
| 157 | Ga0495647_0034347 | 3300046681 | Unclassified | 1899 |
| 158 | Ga0495658_0071693 | 3300046683 | Bacteria | 2013 |
| 159 | Ga0495613_0002693 | 3300046689 | Bacteria | 13333 |
| 160 | Ga0495604_0038726 | 3300047317 | Bacteria | 3751 |
| 161 | Ga0495674_0034386 | 3300047319 | Bacteria | 4585 |
| 162 | Ga0495684_0002982 | 3300047471 | Bacteria | 13320 |
| 163 | Ga0495684_0027830 | 3300047471 | Bacteria | 4342 |
| 164 | Ga0496108_0046767 | 3300048911 | Bacteria | 3616 |
| 165 | Ga0496112_0136496 | 3300048915 | Bacteria | 2423 |
| 166 | Ga0496114_0221759 | 3300048917 | Bacteria | 1660 |
| 167 | Ga0496115_0165444 | 3300048918 | Unclassified | 1829 |
| 168 | Ga0501041_0007813 | 3300049577 | Bacteria | 6285 |
| 169 | Ga0501071_0007124 | 3300049587 | Bacteria | 7308 |
| 170 | Ga0501071_0086654 | 3300049587 | Bacteria | 2297 |
| 171 | Ga0501045_0110282 | 3300049824 | Bacteria | 2040 |
| 172 | nmdc:mga05p37_11063_c1 | 3300050507 | Bacteria | 10720 |
| 173 | nmdc:mga05p37_1107_c1 | 3300050507 | Bacteria | 28841 |
| 174 | nmdc:mga05p37_18704_c1 | 3300050507 | Bacteria | 8372 |
| 175 | nmdc:mga05p37_18828_c1 | 3300050507 | Bacteria | 8345 |
| 176 | nmdc:mga05p37_205444_c1 | 3300050507 | Bacteria | 2383 |
| 177 | nmdc:mga05p37_228479_c1 | 3300050507 | Bacteria | 2243 |
| 178 | nmdc:mga05p37_28643_c1 | 3300050507 | Bacteria | 6794 |
| 179 | nmdc:mga05p37_9829_c1 | 3300050507 | Bacteria | 11354 |
| 180 | nmdc:mga0n895_160450_c1 | 3300050512 | Bacteria | 2280 |
| 181 | nmdc:mga0n895_6669_c1 | 3300050512 | Bacteria | 9841 |
| 182 | nmdc:mga0n895_9210_c1 | 3300050512 | Bacteria | 8625 |
| 183 | nmdc:mga0rr50_167673_c1 | 3300050513 | Bacteria | 1787 |
| 184 | nmdc:mga0rr50_17827_c1 | 3300050513 | Bacteria | 4754 |
| 185 | nmdc:mga0rr50_28_c1 | 3300050513 | Bacteria | 108950 |
| 186 | nmdc:mga08x19_121_c1 | 3300050514 | Bacteria | 69968 |
| 187 | nmdc:mga08x19_29555_c1 | 3300050514 | Bacteria | 3438 |
| 188 | nmdc:mga0a205_135895_c1 | 3300050515 | Bacteria | 2359 |
| 189 | nmdc:mga0a205_93589_c1 | 3300050515 | Bacteria | 2903 |
| 190 | Ga0495601_0016854 | 3300053077 | Bacteria | 4431 |
| 191 | Ga0495601_0029330 | 3300053077 | Bacteria | 3412 |
| 192 | Ga0495595_0010136 | 3300053084 | Bacteria | 3913 |
| 193 | Ga0495595_0021060 | 3300053084 | Bacteria | 2845 |
| 194 | Ga0495619_0030575 | 3300053085 | Bacteria | 3486 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005614 | Ga0068856_100014808 | Ga0068856_1000148084 | 422 |
| 2 | 3300009093 | Ga0105240_10006658 | Ga0105240_1000665823 | 422 |
| 3 | 3300013105 | Ga0157369_10160490 | Ga0157369_101604902 | 422 |
| 4 | 3300025913 | Ga0207695_10065549 | Ga0207695_100655492 | 422 |
| 5 | 3300046514 | Ga0495618_0057940 | Ga0495618_0057940_1098_2441 | 426 |
| 6 | 3300042156 | Ga0439446_0018271 | Ga0439446_0018271_45_1463 | 437 |
| 7 | 3300005334 | Ga0068869_100119534 | Ga0068869_1001195343 | 438 |
| 8 | 3300049587 | Ga0501071_0086654 | Ga0501071_0086654_864_2231 | 438 |
| 9 | 3300005614 | Ga0068856_100165908 | Ga0068856_1001659082 | 439 |
| 10 | 3300013296 | Ga0157374_10052970 | Ga0157374_100529703 | 439 |
| 11 | 3300025919 | Ga0207657_10000448 | Ga0207657_1000044833 | 439 |
| 12 | 3300025944 | Ga0207661_10051938 | Ga0207661_100519383 | 439 |
| 13 | 3300005336 | Ga0070680_100063054 | Ga0070680_1000630543 | 440 |
| 14 | 3300025941 | Ga0207711_10036656 | Ga0207711_100366563 | 445 |
| 15 | 3300046454 | Ga0495592_0024896 | Ga0495592_0024896_2646_4097 | 446 |
| 16 | 3300046476 | Ga0495662_0064435 | Ga0495662_0064435_305_1711 | 447 |
| 17 | 3300046477 | Ga0495664_0040007 | Ga0495664_0040007_40_1446 | 447 |
| 18 | 3300046511 | Ga0495608_0000803 | Ga0495608_0000803_15640_17046 | 447 |
| 19 | 3300046516 | Ga0495628_0022437 | Ga0495628_0022437_1803_3209 | 447 |
| 20 | 3300046559 | Ga0495667_0082654 | Ga0495667_0082654_236_1642 | 447 |
| 21 | 3300046689 | Ga0495613_0002693 | Ga0495613_0002693_6294_7700 | 447 |
| 22 | 3300047317 | Ga0495604_0038726 | Ga0495604_0038726_499_1905 | 447 |
| 23 | 3300047471 | Ga0495684_0002982 | Ga0495684_0002982_6227_7633 | 447 |
| 24 | 3300053077 | Ga0495601_0016854 | Ga0495601_0016854_1337_2743 | 447 |
| 25 | 3300053084 | Ga0495595_0010136 | Ga0495595_0010136_1210_2616 | 447 |
| 26 | 3300053085 | Ga0495619_0030575 | Ga0495619_0030575_1865_3271 | 447 |
| 27 | 3300014968 | Ga0157379_10007571 | Ga0157379_100075719 | 449 |
| 28 | 3300005546 | Ga0070696_100077330 | Ga0070696_1000773303 | 450 |
| 29 | 3300013306 | Ga0163162_10150972 | Ga0163162_101509722 | 450 |
| 30 | 3300005354 | Ga0070675_100000147 | Ga0070675_10000014734 | 453 |
| 31 | 3300005468 | Ga0070707_100141190 | Ga0070707_1001411902 | 453 |
| 32 | 3300005549 | Ga0070704_100210380 | Ga0070704_1002103802 | 453 |
| 33 | 3300005617 | Ga0068859_100050521 | Ga0068859_1000505212 | 453 |
| 34 | 3300006931 | Ga0097620_100050520 | Ga0097620_1000505202 | 453 |
| 35 | 3300009147 | Ga0114129_10003979 | Ga0114129_1000397910 | 453 |
| 36 | 3300025926 | Ga0207659_10000075 | Ga0207659_1000007536 | 453 |
| 37 | 3300050507 | nmdc:mga05p37_28643_c1 | nmdc:mga05p37_28643_c1_300_1802 | 453 |
| 38 | 3300048917 | Ga0496114_0221759 | Ga0496114_0221759_60_1427 | 454 |
| 39 | 3300005355 | Ga0070671_100001353 | Ga0070671_1000013536 | 455 |
| 40 | 3300005365 | Ga0070688_100034710 | Ga0070688_1000347103 | 455 |
| 41 | 3300005543 | Ga0070672_100035734 | Ga0070672_1000357341 | 455 |
| 42 | 3300005617 | Ga0068859_100077211 | Ga0068859_1000772112 | 455 |
| 43 | 3300005843 | Ga0068860_100141270 | Ga0068860_1001412702 | 455 |
| 44 | 3300006931 | Ga0097620_100077211 | Ga0097620_1000772112 | 455 |
| 45 | 3300009177 | Ga0105248_10064612 | Ga0105248_100646122 | 455 |
| 46 | 3300025931 | Ga0207644_10013494 | Ga0207644_100134943 | 455 |
| 47 | 3300025940 | Ga0207691_10044626 | Ga0207691_100446262 | 455 |
| 48 | 3300049587 | Ga0501071_0007124 | Ga0501071_0007124_3672_5171 | 456 |
| 49 | 3300036401 | Ga0373937_0047270 | Ga0373937_0047270_1150_2583 | 458 |
| 50 | 3300046543 | Ga0495645_0003365 | Ga0495645_0003365_7844_9277 | 458 |
| 51 | 3300047319 | Ga0495674_0034386 | Ga0495674_0034386_1771_3204 | 458 |
| 52 | 3300047471 | Ga0495684_0027830 | Ga0495684_0027830_1750_3183 | 458 |
| 53 | 3300053077 | Ga0495601_0029330 | Ga0495601_0029330_797_2230 | 458 |
| 54 | 3300053084 | Ga0495595_0021060 | Ga0495595_0021060_1338_2771 | 458 |
| 55 | 3300046683 | Ga0495658_0071693 | Ga0495658_0071693_536_1918 | 459 |
| 56 | 3300006852 | Ga0075433_10024234 | Ga0075433_100242345 | 460 |
| 57 | 3300006871 | Ga0075434_100008883 | Ga0075434_1000088834 | 460 |
| 58 | 3300007076 | Ga0075435_100000353 | Ga0075435_10000035321 | 460 |
| 59 | 3300009147 | Ga0114129_10014381 | Ga0114129_100143811 | 460 |
| 60 | 3300009147 | Ga0114129_10125326 | Ga0114129_101253263 | 460 |
| 61 | 3300025913 | Ga0207695_10049166 | Ga0207695_100491662 | 460 |
| 62 | 3300050507 | nmdc:mga05p37_228479_c1 | nmdc:mga05p37_228479_c1_376_1827 | 460 |
| 63 | 3300050507 | nmdc:mga05p37_9829_c1 | nmdc:mga05p37_9829_c1_9860_11335 | 460 |
| 64 | 3300050512 | nmdc:mga0n895_9210_c1 | nmdc:mga0n895_9210_c1_1613_3064 | 460 |
| 65 | 3300050513 | nmdc:mga0rr50_17827_c1 | nmdc:mga0rr50_17827_c1_1662_3113 | 460 |
| 66 | 3300005841 | Ga0068863_100002769 | Ga0068863_1000027692 | 461 |
| 67 | 3300026088 | Ga0207641_10014394 | Ga0207641_100143942 | 461 |
| 68 | 3300009094 | Ga0111539_10231518 | Ga0111539_102315182 | 462 |
| 69 | 3300025940 | Ga0207691_10099127 | Ga0207691_100991273 | 462 |
| 70 | 3300025986 | Ga0207658_10123865 | Ga0207658_101238652 | 462 |
| 71 | 3300009176 | Ga0105242_10063095 | Ga0105242_100630952 | 463 |
| 72 | 3300009177 | Ga0105248_10059775 | Ga0105248_100597753 | 463 |
| 73 | 3300025941 | Ga0207711_10088243 | Ga0207711_100882432 | 463 |
| 74 | 3300031852 | Ga0307410_10060976 | Ga0307410_100609762 | 463 |
| 75 | 3300031901 | Ga0307406_10042739 | Ga0307406_100427394 | 463 |
| 76 | 3300031903 | Ga0307407_10128550 | Ga0307407_101285502 | 463 |
| 77 | 3300031995 | Ga0307409_100049846 | Ga0307409_1000498463 | 463 |
| 78 | 3300032002 | Ga0307416_100011757 | Ga0307416_1000117573 | 463 |
| 79 | 3300009147 | Ga0114129_10351610 | Ga0114129_103516102 | 464 |
| 80 | 3300050507 | nmdc:mga05p37_1107_c1 | nmdc:mga05p37_1107_c1_19895_21358 | 464 |
| 81 | 3300006237 | Ga0097621_100000391 | Ga0097621_10000039110 | 465 |
| 82 | 3300006358 | Ga0068871_100014278 | Ga0068871_1000142784 | 465 |
| 83 | 3300009147 | Ga0114129_10001588 | Ga0114129_100015882 | 465 |
| 84 | 3300014969 | Ga0157376_10078298 | Ga0157376_100782982 | 465 |
| 85 | 3300050507 | nmdc:mga05p37_11063_c1 | nmdc:mga05p37_11063_c1_8854_10257 | 465 |
| 86 | 3300050515 | nmdc:mga0a205_135895_c1 | nmdc:mga0a205_135895_c1_941_2344 | 465 |
| 87 | 3300013308 | Ga0157375_10092990 | Ga0157375_100929903 | 466 |
| 88 | 3300025972 | Ga0207668_10036342 | Ga0207668_100363422 | 466 |
| 89 | 3300026075 | Ga0207708_10044313 | Ga0207708_100443132 | 466 |
| 90 | 3300042436 | Ga0439435_0012328 | Ga0439435_0012328_436_1872 | 466 |
| 91 | 3300046455 | Ga0495603_0027897 | Ga0495603_0027897_519_1955 | 467 |
| 92 | 3300009176 | Ga0105242_10019454 | Ga0105242_100194545 | 468 |
| 93 | 3300006871 | Ga0075434_100116680 | Ga0075434_1001166802 | 469 |
| 94 | 3300007076 | Ga0075435_100051034 | Ga0075435_1000510344 | 469 |
| 95 | 3300050512 | nmdc:mga0n895_160450_c1 | nmdc:mga0n895_160450_c1_292_1716 | 469 |
| 96 | 3300050513 | nmdc:mga0rr50_167673_c1 | nmdc:mga0rr50_167673_c1_192_1616 | 469 |
| 97 | 3300025941 | Ga0207711_10036319 | Ga0207711_100363192 | 470 |
| 98 | 3300025960 | Ga0207651_10005343 | Ga0207651_100053432 | 470 |
| 99 | 3300026035 | Ga0207703_10081096 | Ga0207703_100810961 | 470 |
| 100 | 3300044694 | Ga0466963_0149133 | Ga0466963_0149133_167_1579 | 470 |
| 101 | 3300049577 | Ga0501041_0007813 | Ga0501041_0007813_125_1588 | 470 |
| 102 | 3300049824 | Ga0501045_0110282 | Ga0501045_0110282_52_1515 | 470 |
| 103 | 3300005468 | Ga0070707_100101243 | Ga0070707_1001012431 | 471 |
| 104 | 3300005549 | Ga0070704_100001892 | Ga0070704_10000189211 | 471 |
| 105 | 3300005618 | Ga0068864_100016823 | Ga0068864_1000168233 | 471 |
| 106 | 3300005842 | Ga0068858_100183919 | Ga0068858_1001839192 | 471 |
| 107 | 3300009147 | Ga0114129_10007344 | Ga0114129_100073441 | 471 |
| 108 | 3300009147 | Ga0114129_10064903 | Ga0114129_100649034 | 471 |
| 109 | 3300014325 | Ga0163163_10003243 | Ga0163163_100032436 | 471 |
| 110 | 3300026095 | Ga0207676_10201919 | Ga0207676_102019191 | 471 |
| 111 | 3300048915 | Ga0496112_0136496 | Ga0496112_0136496_938_2365 | 471 |
| 112 | 3300050507 | nmdc:mga05p37_18704_c1 | nmdc:mga05p37_18704_c1_1808_3283 | 471 |
| 113 | 3300050507 | nmdc:mga05p37_18828_c1 | nmdc:mga05p37_18828_c1_2424_3848 | 471 |
| 114 | 3300005618 | Ga0068864_100026062 | Ga0068864_1000260622 | 472 |
| 115 | 3300005842 | Ga0068858_100004497 | Ga0068858_1000044973 | 472 |
| 116 | 3300006852 | Ga0075433_10086636 | Ga0075433_100866362 | 472 |
| 117 | 3300009093 | Ga0105240_10057740 | Ga0105240_100577404 | 472 |
| 118 | 3300009177 | Ga0105248_10007182 | Ga0105248_100071824 | 472 |
| 119 | 3300014325 | Ga0163163_10008769 | Ga0163163_100087699 | 472 |
| 120 | 3300025913 | Ga0207695_10090504 | Ga0207695_100905042 | 472 |
| 121 | 3300025925 | Ga0207650_10112825 | Ga0207650_101128252 | 472 |
| 122 | 3300025941 | Ga0207711_10013002 | Ga0207711_100130025 | 472 |
| 123 | 3300026035 | Ga0207703_10054441 | Ga0207703_100544412 | 472 |
| 124 | 3300026095 | Ga0207676_10053771 | Ga0207676_100537712 | 472 |
| 125 | 3300048911 | Ga0496108_0046767 | Ga0496108_0046767_1874_3298 | 472 |
| 126 | 3300050515 | nmdc:mga0a205_93589_c1 | nmdc:mga0a205_93589_c1_144_1619 | 472 |
| 127 | 3300005445 | Ga0070708_100169148 | Ga0070708_1001691482 | 474 |
| 128 | 3300005518 | Ga0070699_100001909 | Ga0070699_10000190917 | 475 |
| 129 | 3300009093 | Ga0105240_10033201 | Ga0105240_100332016 | 475 |
| 130 | 3300050514 | nmdc:mga08x19_29555_c1 | nmdc:mga08x19_29555_c1_1654_3087 | 475 |
| 131 | 3300005335 | Ga0070666_10075221 | Ga0070666_100752211 | 476 |
| 132 | 3300005338 | Ga0068868_100074601 | Ga0068868_1000746013 | 476 |
| 133 | 3300005548 | Ga0070665_100030592 | Ga0070665_1000305925 | 476 |
| 134 | 3300005618 | Ga0068864_100138868 | Ga0068864_1001388684 | 476 |
| 135 | 3300005842 | Ga0068858_100037236 | Ga0068858_1000372363 | 476 |
| 136 | 3300006237 | Ga0097621_100001463 | Ga0097621_1000014633 | 476 |
| 137 | 3300006881 | Ga0068865_100007396 | Ga0068865_1000073962 | 476 |
| 138 | 3300006914 | Ga0075436_100012951 | Ga0075436_1000129516 | 476 |
| 139 | 3300007076 | Ga0075435_100016083 | Ga0075435_1000160832 | 476 |
| 140 | 3300009147 | Ga0114129_10019030 | Ga0114129_100190302 | 476 |
| 141 | 3300009176 | Ga0105242_10023674 | Ga0105242_100236743 | 476 |
| 142 | 3300009177 | Ga0105248_10095078 | Ga0105248_100950782 | 476 |
| 143 | 3300014969 | Ga0157376_10046597 | Ga0157376_100465973 | 476 |
| 144 | 3300025903 | Ga0207680_10019566 | Ga0207680_100195662 | 476 |
| 145 | 3300025938 | Ga0207704_10017021 | Ga0207704_100170212 | 476 |
| 146 | 3300026089 | Ga0207648_10104543 | Ga0207648_101045431 | 476 |
| 147 | 3300037068 | Ga0373925_0114322 | Ga0373925_0114322_226_1659 | 476 |
| 148 | 3300046681 | Ga0495647_0034347 | Ga0495647_0034347_384_1820 | 476 |
| 149 | 3300048918 | Ga0496115_0165444 | Ga0496115_0165444_16_1449 | 476 |
| 150 | 3300050507 | nmdc:mga05p37_205444_c1 | nmdc:mga05p37_205444_c1_813_2297 | 476 |
| 151 | 3300046642 | Ga0495634_0032917 | Ga0495634_0032917_976_2502 | 477 |
| 152 | 3300009177 | Ga0105248_10074207 | Ga0105248_100742072 | 478 |
| 153 | 3300005842 | Ga0068858_100124600 | Ga0068858_1001246003 | 479 |
| 154 | 3300009098 | Ga0105245_10091279 | Ga0105245_100912793 | 479 |
| 155 | 3300025927 | Ga0207687_10020938 | Ga0207687_100209383 | 479 |
| 156 | 3300026035 | Ga0207703_10170331 | Ga0207703_101703312 | 479 |
| 157 | 3300005468 | Ga0070707_100065109 | Ga0070707_1000651092 | 480 |
| 158 | 3300005536 | Ga0070697_100113061 | Ga0070697_1001130612 | 480 |
| 159 | 3300006871 | Ga0075434_100000097 | Ga0075434_1000000972 | 481 |
| 160 | 3300006914 | Ga0075436_100000341 | Ga0075436_1000003411 | 481 |
| 161 | 3300007076 | Ga0075435_100000149 | Ga0075435_1000001492 | 481 |
| 162 | 3300050512 | nmdc:mga0n895_6669_c1 | nmdc:mga0n895_6669_c1_125_1579 | 481 |
| 163 | 3300050513 | nmdc:mga0rr50_28_c1 | nmdc:mga0rr50_28_c1_60353_61807 | 481 |
| 164 | 3300050514 | nmdc:mga08x19_121_c1 | nmdc:mga08x19_121_c1_40141_41595 | 481 |
| 165 | 3300005842 | Ga0068858_100243053 | Ga0068858_1002430531 | 484 |
| 166 | 3300006847 | Ga0075431_100123365 | Ga0075431_1001233653 | 485 |
| 167 | 3300005328 | Ga0070676_10002816 | Ga0070676_100028168 | 487 |
| 168 | 3300005341 | Ga0070691_10001036 | Ga0070691_1000103610 | 487 |
| 169 | 3300005364 | Ga0070673_100036797 | Ga0070673_1000367972 | 487 |
| 170 | 3300005438 | Ga0070701_10012580 | Ga0070701_100125802 | 487 |
| 171 | 3300005440 | Ga0070705_100002967 | Ga0070705_1000029673 | 487 |
| 172 | 3300005441 | Ga0070700_100007688 | Ga0070700_1000076885 | 487 |
| 173 | 3300005545 | Ga0070695_100007855 | Ga0070695_1000078555 | 487 |
| 174 | 3300005546 | Ga0070696_100019788 | Ga0070696_1000197882 | 487 |
| 175 | 3300005615 | Ga0070702_100010598 | Ga0070702_1000105982 | 487 |
| 176 | 3300005719 | Ga0068861_100002556 | Ga0068861_1000025565 | 487 |
| 177 | 3300025907 | Ga0207645_10000374 | Ga0207645_1000037426 | 487 |
| 178 | 3300025960 | Ga0207651_10113999 | Ga0207651_101139991 | 487 |
| 179 | 3300026075 | Ga0207708_10002808 | Ga0207708_100028082 | 487 |
| 180 | 3300026118 | Ga0207675_100003224 | Ga0207675_10000322416 | 487 |
| 181 | 3300005295 | Ga0065707_10009688 | Ga0065707_100096884 | 488 |
| 182 | 3300005353 | Ga0070669_100004259 | Ga0070669_1000042593 | 488 |
| 183 | 3300005356 | Ga0070674_100004114 | Ga0070674_1000041142 | 488 |
| 184 | 3300005549 | Ga0070704_100083911 | Ga0070704_1000839112 | 488 |
| 185 | 3300005617 | Ga0068859_100243578 | Ga0068859_1002435782 | 488 |
| 186 | 3300005719 | Ga0068861_100142881 | Ga0068861_1001428812 | 488 |
| 187 | 3300005844 | Ga0068862_100087766 | Ga0068862_1000877662 | 488 |
| 188 | 3300006931 | Ga0097620_100243579 | Ga0097620_1002435792 | 488 |
| 189 | 3300009553 | Ga0105249_10148381 | Ga0105249_101483812 | 488 |
| 190 | 3300014326 | Ga0157380_10098505 | Ga0157380_100985052 | 488 |
| 191 | 3300025923 | Ga0207681_10011173 | Ga0207681_100111733 | 488 |
| 192 | 3300025935 | Ga0207709_10030298 | Ga0207709_100302982 | 488 |
| 193 | 3300025961 | Ga0207712_10049441 | Ga0207712_100494412 | 488 |
| 194 | 3300028380 | Ga0268265_10055972 | Ga0268265_100559722 | 488 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1wy5-assembly1.cif.gz_A | crystal structure of isoluecyl-trna lysidine synthetase | 0.8542 | 1 | 324 |
| 3hj7-assembly1.cif.gz_A | crystal structure of tils c-terminal domain | 0.8483 | 344 | 486 |
| 1wy5-assembly1.cif.gz_A | crystal structure of isoluecyl-trna lysidine synthetase | 0.8466 | 1 | 324 |
| 3hj7-assembly1.cif.gz_A | crystal structure of tils c-terminal domain | 0.8365 | 344 | 486 |
| 5b4f-assembly1.cif.gz_A-2 | sulfur transferase ttua in complex with iron sulfur cluster | 0.823 | 4 | 223 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 1wy5B01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.9035 | 1 | 210 | 3.40.50.620 |
| 3a2kB01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8989 | 4 | 126 | 3.40.50.620 |
| af_A0A1D6HL54_20_239_3.40.50.620 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8792 | 4 | 178 | 3.40.50.620 |
| af_Q2G0R2_358_425_2.30.130.10 | Mainly Beta;Roll;Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4;PUA domain | 0.8735 | 408 | 466 | 2.30.130.10 |
| 1wy5B01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs | 0.8726 | 1 | 210 | 3.40.50.620 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1F8ZMW8-F1-model_v4 | tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) | 0.9659 | 4 | 129 |
GO:0005524
GO:0005737 GO:0006400 GO:0032267 |
| AF-A0A3M0WMW2-F1-model_v4 | tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) | 0.9629 | 4 | 230 |
GO:0005524
GO:0005737 GO:0006400 GO:0032267 |
| AF-A0A7C3GC02-F1-model_v4 | tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) | 0.9593 | 4 | 225 |
GO:0005524
GO:0005737 GO:0006400 GO:0032267 |
| AF-A0A7C3XWK0-F1-model_v4 | tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) | 0.9548 | 4 | 129 |
GO:0005524
GO:0005737 GO:0006400 GO:0032267 |
| AF-A0A354YX91-F1-model_v4 | tRNA(Ile)-lysidine synthetase (EC 6.3.4.19) | 0.9509 | 4 | 186 |
GO:0005524
GO:0005737 GO:0006400 GO:0032267 |
Predicted Structure (AlphaFold2)
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