F297781

General Info

Members Datasets Scaffolds Average Seq Length
193 142 386 456

Family's Representative Sequence

Representative Sequence 3300049588|Ga0501072_0031130|Ga0501072_0031130_1869_3503
Length 523
Sequence LTRTPARPTIGHADPRAAPARAASNDLRRRTAYPGTQRRGIAARRLGSQKGFDALKRRGPDDREPKSDEHRPTGDVDPEAFRRDAHRLSDWITEYFASLDLYPVLAQVRPGDIRSALPEDAPEEGEPFDRILADFEQVLLPGITHWNHPGFFAYFAISGSGPGVLADFLSAALNVQAMLWRTSPAATELEEVTLGWLRRLIGLPADFEGVIYDTASISTLHALAAAREAAVPDVRTAGLAGRPDLGRLRVYCSEHAHSSVDKAVILLGLGHESLRRIEADGEFRMRTDALESAIYEDREAGWLPIAACRGHDIWLHVDAAYAGVAAMVPGYEWILDGAEEADSLVVNPHKWLFTPFDLSAFYCRRMDVIRRAFALTPEYLRTVETAPVRNLMDTGIQLGRRFRALKLWMVLRHFGARGIRDRLAEHMRLARLFAEWVDGSADFIRVAPVPFSVVCFRSDTDDAFNERLLDAVNASGEVFLSHTRLDGRYVLRLAIGNLRTTEAHVARAWALLQARAAELRDSI

Samples

Sample ID Description Type Environment
1 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
96 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
97 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
101 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
102 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
103 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
104 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
108 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
109 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
110 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
127 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
128 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
132 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
133 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
134 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
135 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
136 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
137 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
140 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
141 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
142 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.7
Nodule 0
Rhizoplane 3.63
Rhizosphere 90.16
Stem 0
Stem Tuber 0
Unclassified 8.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501072_0031130 3300049588 Bacteria 4175
2 Ga0065714_10075894 3300005288 Bacteria 2853
3 Ga0065712_10001588 3300005290 Bacteria 7907
4 Ga0065715_10096061 3300005293 Bacteria 3948
5 Ga0070683_100008409 3300005329 Bacteria 8761
6 Ga0070683_100015907 3300005329 Bacteria 6619
7 Ga0070683_100160440 3300005329 Bacteria 2133
8 Ga0070670_100001574 3300005331 Bacteria 18388
9 Ga0070670_100025856 3300005331 Bacteria 5050
10 Ga0070680_100002798 3300005336 Bacteria 12956
11 Ga0068868_100030167 3300005338 Bacteria 4158
12 Ga0070691_10009705 3300005341 Bacteria 4392
13 Ga0070668_100085359 3300005347 Bacteria 2481
14 Ga0070675_100000385 3300005354 Bacteria 29879
15 Ga0070674_100010638 3300005356 Bacteria 5573
16 Ga0070674_100021652 3300005356 Bacteria 4133
17 Ga0070713_100001874 3300005436 Bacteria 13565
18 Ga0070713_100004053 3300005436 Bacteria 9759
19 Ga0070711_100081561 3300005439 Unclassified 2306
20 Ga0070708_100050146 3300005445 Bacteria 3695
21 Ga0070681_10003037 3300005458 Bacteria 15558
22 Ga0070681_10054606 3300005458 Bacteria 3981
23 Ga0070685_10006661 3300005466 Bacteria 5900
24 Ga0070698_100041660 3300005471 Bacteria 4714
25 Ga0070699_100001411 3300005518 Bacteria 22076
26 Ga0070699_100005320 3300005518 Bacteria 11294
27 Ga0070699_100044037 3300005518 Unclassified 3863
28 Ga0070684_100000654 3300005535 Bacteria 23885
29 Ga0068853_100006617 3300005539 Bacteria 9227
30 Ga0068853_100244320 3300005539 Bacteria 1646
31 Ga0070672_100027365 3300005543 Bacteria 4252
32 Ga0070696_100002271 3300005546 Bacteria 12669
33 Ga0070665_100032640 3300005548 Bacteria 5240
34 Ga0070665_100040189 3300005548 Bacteria 4702
35 Ga0070704_100029034 3300005549 Bacteria 3687
36 Ga0070704_100057967 3300005549 Bacteria 2757
37 Ga0068855_100073174 3300005563 Bacteria 3982
38 Ga0070664_100128456 3300005564 Bacteria 2225
39 Ga0068857_100000367 3300005577 Bacteria 31519
40 Ga0068857_100038108 3300005577 Bacteria 4257
41 Ga0068856_100008120 3300005614 Bacteria 10244
42 Ga0068852_100006117 3300005616 Bacteria 8679
43 Ga0068864_100001276 3300005618 Bacteria 20925
44 Ga0068858_100029179 3300005842 Bacteria 5122
45 Ga0081539_10000535 3300005985 Bacteria 78890
46 Ga0075365_10012544 3300006038 Bacteria 5037
47 Ga0075364_10008139 3300006051 Bacteria 6255
48 Ga0075364_10009427 3300006051 Bacteria 5857
49 Ga0075362_10014704 3300006177 Unclassified 3166
50 Ga0075367_10004513 3300006178 Bacteria 6806
51 Ga0075367_10033637 3300006178 Bacteria 2956
52 Ga0075366_10026360 3300006195 Unclassified 3404
53 Ga0097621_100028484 3300006237 Bacteria 4401
54 Ga0075370_10011142 3300006353 Unclassified 4717
55 Ga0075428_100003021 3300006844 Bacteria 18363
56 Ga0075428_100005299 3300006844 Bacteria 14336
57 Ga0075428_100040628 3300006844 Bacteria 5116
58 Ga0075428_100212349 3300006844 Bacteria 2091
59 Ga0075430_100017547 3300006846 Bacteria 6096
60 Ga0075430_100067023 3300006846 Bacteria 3014
61 Ga0075431_100013645 3300006847 Bacteria 8211
62 Ga0075431_100018129 3300006847 Bacteria 7161
63 Ga0075433_10002448 3300006852 Bacteria 14130
64 Ga0075434_100005962 3300006871 Bacteria 11154
65 Ga0075434_100006168 3300006871 Bacteria 10978
66 Ga0075434_100066086 3300006871 Unclassified 3602
67 Ga0075429_100037387 3300006880 Unclassified 4226
68 Ga0075436_100141995 3300006914 Bacteria 1688
69 Ga0075435_100044401 3300007076 Unclassified 3560
70 Ga0111539_10075727 3300009094 Unclassified 3963
71 Ga0105245_10007576 3300009098 Bacteria 9508
72 Ga0105245_10058855 3300009098 Bacteria 3459
73 Ga0114129_10002219 3300009147 Bacteria 26787
74 Ga0114129_10008892 3300009147 Bacteria 14318
75 Ga0114129_10011054 3300009147 Bacteria 12860
76 Ga0114129_10021262 3300009147 Bacteria 9213
77 Ga0114129_10339811 3300009147 Unclassified 1992
78 Ga0105248_10035034 3300009177 Bacteria 5615
79 Ga0105248_10061941 3300009177 Bacteria 4201
80 Ga0105248_10110528 3300009177 Bacteria 3099
81 Ga0105237_10006074 3300009545 Bacteria 13509
82 Ga0105237_10036751 3300009545 Bacteria 4955
83 Ga0105238_10011913 3300009551 Bacteria 8761
84 Ga0105238_10014597 3300009551 Bacteria 7943
85 Ga0105249_10057540 3300009553 Bacteria 3562
86 Ga0105246_10060968 3300011119 Bacteria 2623
87 Ga0157370_10004342 3300013104 Bacteria 16282
88 Ga0157369_10005076 3300013105 Bacteria 15402
89 Ga0157378_10008155 3300013297 Bacteria 9140
90 Ga0163162_10160201 3300013306 Bacteria 2372
91 Ga0157372_10009697 3300013307 Bacteria 10238
92 Ga0157380_10056142 3300014326 Bacteria 3130
93 Ga0207654_10019003 3300025911 Bacteria 3616
94 Ga0207707_10002533 3300025912 Bacteria 16403
95 Ga0207695_10005195 3300025913 Bacteria 17425
96 Ga0207671_10017943 3300025914 Bacteria 5443
97 Ga0207693_10041045 3300025915 Bacteria 3644
98 Ga0207663_10061174 3300025916 Unclassified 2388
99 Ga0207660_10155578 3300025917 Bacteria 1759
100 Ga0207652_10029681 3300025921 Bacteria 4574
101 Ga0207694_10001921 3300025924 Bacteria 17229
102 Ga0207650_10035982 3300025925 Bacteria 3599
103 Ga0207659_10053790 3300025926 Bacteria 2873
104 Ga0207687_10000988 3300025927 Bacteria 19282
105 Ga0207700_10010344 3300025928 Bacteria 5880
106 Ga0207700_10015100 3300025928 Archaea 5081
107 Ga0207664_10002426 3300025929 Bacteria 12331
108 Ga0207669_10024568 3300025937 Bacteria 3241
109 Ga0207669_10040895 3300025937 Bacteria 2693
110 Ga0207704_10025179 3300025938 Bacteria 3243
111 Ga0207691_10024642 3300025940 Bacteria 5658
112 Ga0207691_10041542 3300025940 Bacteria 4244
113 Ga0207711_10036286 3300025941 Bacteria 4183
114 Ga0207661_10019711 3300025944 Bacteria 5034
115 Ga0207661_10037048 3300025944 Bacteria 3811
116 Ga0207679_10039118 3300025945 Bacteria 3385
117 Ga0207679_10047930 3300025945 Bacteria 3107
118 Ga0207679_10076628 3300025945 Bacteria 2542
119 Ga0207667_10001168 3300025949 Bacteria 32962
120 Ga0207712_10028116 3300025961 Bacteria 3759
121 Ga0207677_10088879 3300026023 Bacteria 2241
122 Ga0207639_10012287 3300026041 Bacteria 5962
123 Ga0207648_10081762 3300026089 Bacteria 2817
124 Ga0207676_10003885 3300026095 Bacteria 10552
125 Ga0207676_10089984 3300026095 Bacteria 2517
126 Ga0207674_10000166 3300026116 Bacteria 79149
127 Ga0207674_10003073 3300026116 Bacteria 20649
128 Ga0207675_100022142 3300026118 Bacteria 5917
129 Ga0207698_10092822 3300026142 Bacteria 2476
130 Ga0268266_10010131 3300028379 Bacteria 8262
131 Ga0307410_10119144 3300031852 Unclassified 1922
132 Ga0307411_10036365 3300032005 Bacteria 3085
133 Ga0307415_100011541 3300032126 Bacteria 5062
134 Ga0373954_0003097 3300035118 Bacteria 7030
135 Ga0373955_0004130 3300035172 Bacteria 6407
136 Ga0373937_0002273 3300036401 Bacteria 16039
137 Ga0373937_0027460 3300036401 Bacteria 5147
138 Ga0373925_0000407 3300037068 Bacteria 43887
139 Ga0436364_0515841 3300037853 Bacteria 16542
140 Ga0439453_0002383 3300041408 Bacteria 2585
141 Ga0450894_002376 3300042131 Bacteria 2536
142 Ga0450918_004511 3300042531 Bacteria 2533
143 Ga0466972_0006770 3300044658 Bacteria 5752
144 Ga0466957_0088441 3300044842 Bacteria 1938
145 Ga0451576_0022017 3300045051 Bacteria 6917
146 Ga0466958_0002761 3300045836 Bacteria 8915
147 Ga0495643_0003489 3300046522 Bacteria 11463
148 Ga0495659_0022244 3300046664 Bacteria 2143
149 Ga0495599_0002515 3300046678 Bacteria 10658
150 Ga0495674_0094779 3300047319 Bacteria 2546
151 Ga0495684_0004783 3300047471 Bacteria 10572
152 Ga0496106_0033747 3300048909 Bacteria 3820
153 Ga0496108_0003642 3300048911 Bacteria 12351
154 Ga0496109_0032555 3300048912 Bacteria 4686
155 Ga0496110_0089163 3300048913 Bacteria 2756
156 Ga0496112_0016362 3300048915 Bacteria 6946
157 Ga0496113_0016995 3300048916 Bacteria 5039
158 Ga0496113_0064488 3300048916 Bacteria 2770
159 Ga0501031_0035421 3300049568 Bacteria 3256
160 Ga0501034_0053988 3300049571 Bacteria 4046
161 Ga0501034_0156015 3300049571 Bacteria 2256
162 Ga0501036_0067405 3300049572 Bacteria 3028
163 Ga0501039_0008143 3300049575 Bacteria 7987
164 Ga0501040_0080527 3300049576 Bacteria 2256
165 Ga0501040_0126224 3300049576 Bacteria 1797
166 Ga0501042_0028465 3300049578 Bacteria 3937
167 Ga0501071_0019245 3300049587 Bacteria 4736
168 Ga0501071_0043798 3300049587 Unclassified 3210
169 Ga0501071_0078148 3300049587 Bacteria 2418
170 Ga0501072_0042208 3300049588 Bacteria 3583
171 Ga0501074_0046613 3300049590 Bacteria 3134
172 Ga0501075_0002706 3300049591 Bacteria 11859
173 Ga0501075_0061882 3300049591 Bacteria 2821
174 Ga0501076_0005265 3300049592 Bacteria 9277
175 Ga0501076_0068883 3300049592 Unclassified 2827
176 Ga0501081_0034210 3300049743 Bacteria 3456
177 Ga0501045_0056074 3300049824 Bacteria 2881
178 nmdc:mga00v17_181588_c1 3300050491 Unclassified 1358
179 nmdc:mga06z11_19612_c1 3300050494 Unclassified 3113
180 nmdc:mga04h51_31210_c1 3300050495 Bacteria 1682
181 nmdc:mga05p37_386_c1 3300050507 Bacteria 47260
182 nmdc:mga05p37_88108_c1 3300050507 Bacteria 3826
183 nmdc:mga09592_111226_c1 3300050508 Bacteria 2350
184 nmdc:mga09592_19738_c1 3300050508 Bacteria 4723
185 nmdc:mga0qj67_59830_c1 3300050509 Bacteria 2392
186 nmdc:mga06r32_174966_c1 3300050510 Bacteria 2131
187 nmdc:mga06r32_87898_c1 3300050510 Bacteria 3033
188 nmdc:mga0n895_101787_c1 3300050512 Bacteria 2883
189 nmdc:mga08x19_20202_c1 3300050514 Bacteria 4101
190 nmdc:mga0a205_108925_c1 3300050515 Bacteria 2668
191 nmdc:mga0a205_2315_c1 3300050515 Bacteria 16818
192 Ga0590071_003838 3300059421 Bacteria 3686
193 Ga0501082_0049954 3300060353 Bacteria 3607
194 Ga0501072_0031130
195 Ga0065714_10075894
196 Ga0065712_10001588
197 Ga0065715_10096061
198 Ga0070683_100008409
199 Ga0070683_100015907
200 Ga0070683_100160440
201 Ga0070670_100001574
202 Ga0070670_100025856
203 Ga0070680_100002798
204 Ga0068868_100030167
205 Ga0070691_10009705
206 Ga0070668_100085359
207 Ga0070675_100000385
208 Ga0070674_100010638
209 Ga0070674_100021652
210 Ga0070713_100001874
211 Ga0070713_100004053
212 Ga0070711_100081561
213 Ga0070708_100050146
214 Ga0070681_10003037
215 Ga0070681_10054606
216 Ga0070685_10006661
217 Ga0070698_100041660
218 Ga0070699_100001411
219 Ga0070699_100005320
220 Ga0070699_100044037
221 Ga0070684_100000654
222 Ga0068853_100006617
223 Ga0068853_100244320
224 Ga0070672_100027365
225 Ga0070696_100002271
226 Ga0070665_100032640
227 Ga0070665_100040189
228 Ga0070704_100029034
229 Ga0070704_100057967
230 Ga0068855_100073174
231 Ga0070664_100128456
232 Ga0068857_100000367
233 Ga0068857_100038108
234 Ga0068856_100008120
235 Ga0068852_100006117
236 Ga0068864_100001276
237 Ga0068858_100029179
238 Ga0081539_10000535
239 Ga0075365_10012544
240 Ga0075364_10008139
241 Ga0075364_10009427
242 Ga0075362_10014704
243 Ga0075367_10004513
244 Ga0075367_10033637
245 Ga0075366_10026360
246 Ga0097621_100028484
247 Ga0075370_10011142
248 Ga0075428_100003021
249 Ga0075428_100005299
250 Ga0075428_100040628
251 Ga0075428_100212349
252 Ga0075430_100017547
253 Ga0075430_100067023
254 Ga0075431_100013645
255 Ga0075431_100018129
256 Ga0075433_10002448
257 Ga0075434_100005962
258 Ga0075434_100006168
259 Ga0075434_100066086
260 Ga0075429_100037387
261 Ga0075436_100141995
262 Ga0075435_100044401
263 Ga0111539_10075727
264 Ga0105245_10007576
265 Ga0105245_10058855
266 Ga0114129_10002219
267 Ga0114129_10008892
268 Ga0114129_10011054
269 Ga0114129_10021262
270 Ga0114129_10339811
271 Ga0105248_10035034
272 Ga0105248_10061941
273 Ga0105248_10110528
274 Ga0105237_10006074
275 Ga0105237_10036751
276 Ga0105238_10011913
277 Ga0105238_10014597
278 Ga0105249_10057540
279 Ga0105246_10060968
280 Ga0157370_10004342
281 Ga0157369_10005076
282 Ga0157378_10008155
283 Ga0163162_10160201
284 Ga0157372_10009697
285 Ga0157380_10056142
286 Ga0207654_10019003
287 Ga0207707_10002533
288 Ga0207695_10005195
289 Ga0207671_10017943
290 Ga0207693_10041045
291 Ga0207663_10061174
292 Ga0207660_10155578
293 Ga0207652_10029681
294 Ga0207694_10001921
295 Ga0207650_10035982
296 Ga0207659_10053790
297 Ga0207687_10000988
298 Ga0207700_10010344
299 Ga0207700_10015100
300 Ga0207664_10002426
301 Ga0207669_10024568
302 Ga0207669_10040895
303 Ga0207704_10025179
304 Ga0207691_10024642
305 Ga0207691_10041542
306 Ga0207711_10036286
307 Ga0207661_10019711
308 Ga0207661_10037048
309 Ga0207679_10039118
310 Ga0207679_10047930
311 Ga0207679_10076628
312 Ga0207667_10001168
313 Ga0207712_10028116
314 Ga0207677_10088879
315 Ga0207639_10012287
316 Ga0207648_10081762
317 Ga0207676_10003885
318 Ga0207676_10089984
319 Ga0207674_10000166
320 Ga0207674_10003073
321 Ga0207675_100022142
322 Ga0207698_10092822
323 Ga0268266_10010131
324 Ga0307410_10119144
325 Ga0307411_10036365
326 Ga0307415_100011541
327 Ga0373954_0003097
328 Ga0373955_0004130
329 Ga0373937_0002273
330 Ga0373937_0027460
331 Ga0373925_0000407
332 Ga0436364_0515841
333 Ga0439453_0002383
334 Ga0450894_002376
335 Ga0450918_004511
336 Ga0466972_0006770
337 Ga0466957_0088441
338 Ga0451576_0022017
339 Ga0466958_0002761
340 Ga0495643_0003489
341 Ga0495659_0022244
342 Ga0495599_0002515
343 Ga0495674_0094779
344 Ga0495684_0004783
345 Ga0496106_0033747
346 Ga0496108_0003642
347 Ga0496109_0032555
348 Ga0496110_0089163
349 Ga0496112_0016362
350 Ga0496113_0016995
351 Ga0496113_0064488
352 Ga0501031_0035421
353 Ga0501034_0053988
354 Ga0501034_0156015
355 Ga0501036_0067405
356 Ga0501039_0008143
357 Ga0501040_0080527
358 Ga0501040_0126224
359 Ga0501042_0028465
360 Ga0501071_0019245
361 Ga0501071_0043798
362 Ga0501071_0078148
363 Ga0501072_0042208
364 Ga0501074_0046613
365 Ga0501075_0002706
366 Ga0501075_0061882
367 Ga0501076_0005265
368 Ga0501076_0068883
369 Ga0501081_0034210
370 Ga0501045_0056074
371 nmdc:mga00v17_181588_c1
372 nmdc:mga06z11_19612_c1
373 nmdc:mga04h51_31210_c1
374 nmdc:mga05p37_386_c1
375 nmdc:mga05p37_88108_c1
376 nmdc:mga09592_111226_c1
377 nmdc:mga09592_19738_c1
378 nmdc:mga0qj67_59830_c1
379 nmdc:mga06r32_174966_c1
380 nmdc:mga06r32_87898_c1
381 nmdc:mga0n895_101787_c1
382 nmdc:mga08x19_20202_c1
383 nmdc:mga0a205_108925_c1
384 nmdc:mga0a205_2315_c1
385 Ga0590071_003838
386 Ga0501082_0049954

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00282

Pyridoxal_deC

Pyridoxal-dependent decarboxylase conserved domain

305

459

0.98

PF00282

Pyridoxal_deC

Pyridoxal-dependent decarboxylase conserved domain

110

310

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xin-assembly2.cif.gz_C crystal structure of dodc from pseudomonas 0.9228 11 441
6eem-assembly1.cif.gz_B crystal structure of papaver somniferum tyrosine decarboxylase in complex with l-tyrosine 0.9148 9 441
6khp-assembly1.cif.gz_A-2 crystal structure of oryza sativa tdc with plp and tryptamine 0.9142 9 441
6eem-assembly1.cif.gz_A crystal structure of papaver somniferum tyrosine decarboxylase in complex with l-tyrosine 0.9029 9 441
6liv-assembly2.cif.gz_C crystal structure of tyrosine decarboxylase in complex with plp 0.9014 8 441
ID Description Score Start End Superfamily
af_Q8RY79_386_490_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9675 342 441 3.90.1150.10
af_Q94I30_400_502_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9617 342 441 3.90.1150.10
af_P34751_712_815_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9609 341 441 3.90.1150.10
af_Q7G6M2_418_525_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9503 342 441 3.90.1150.10
af_P20711_1_81_1.20.1340.10 Mainly Alpha;Up-down Bundle;dopa decarboxylase, N-terminal domain;dopa decarboxylase, N-terminal domain 0.9479 11 90 1.20.1340.10
ID Description Score Start End GO Terms
AF-A0A662DVG1-F1-model_v4 Amino acid decarboxylase 0.9822 339 441 GO:0005737
GO:0016831
AF-X1EDD1-F1-model_v4 Histidine decarboxylase 0.9618 145 246 GO:0005737
GO:0016831
GO:0019752
GO:0030170
AF-A0A1Q7YKJ2-F1-model_v4 Amino acid decarboxylase 0.959 11 441 GO:0005737
GO:0006520
GO:0016831
GO:0019752
GO:0030170
AF-A0A382C1G9-F1-model_v4 Aromatic amino acid beta-eliminating lyase/threonine aldolase domain-containing protein 0.9567 327 442 GO:0005737
GO:0016831
AF-A0A2V7JT20-F1-model_v4 Amino acid decarboxylase 0.9554 11 441 GO:0005737
GO:0006520
GO:0016831
GO:0019752
GO:0030170

Map