F296716

General Info

Members Datasets Scaffolds Average Seq Length
193 146 386 356

Family's Representative Sequence

Representative Sequence 3300005343|Ga0070687_100080478|Ga0070687_1000804781
Length 402
Sequence MQDWVCKMMGGFARNTFLRSLRPLRSTLLSGHAQRRLSPMPNQYSRRQLLQAIGAAAAAAPMSALAQGRCMLTFGSPSCVTTATPPPFEPTGWKTVALDHFTFRVADYQKEAAFYAALMGWTLRSDDGKQAVMDLEKWGTVIFRQAPRESFASPPPAEGGGRQGRSEPVTAVVESFCFVIEPWNAKTVEAELKKRGLAPVAVNDGNGFESFRVKDPDGFDLQIANGNGYAKARRSPFAATGWKTVWLDHFSFNAADYKKSTWFYRNLLGWGETYDEGSQNECLMGDVGDIIIRGGNSLAPDFATTSAARRERARIDHISFGIQPWDTDGVKAELEKRGLRAQIDTSSRHKGPDGTWVPDEIHTAAFKSYHTATPNGYNLQISYVTHDNRLALPTAVKPKPTA

Samples

Sample ID Description Type Environment
1 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
58 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
59 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
85 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
86 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
87 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
88 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
89 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
90 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
91 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
92 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
93 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
94 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
95 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
96 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
97 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
98 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
99 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
100 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
101 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
102 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
103 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
104 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
105 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
106 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
107 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
108 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
114 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
115 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
116 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
121 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
122 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
123 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
124 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
125 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
126 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
127 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
130 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
131 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
132 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
133 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
134 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
135 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
136 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
140 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
141 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
145 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.48
Metatranscriptomes 0.52
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.59
Rhizosphere 95.34
Stem 0
Stem Tuber 0
Unclassified 18.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070687_100080478 3300005343 Unclassified 1776
2 JGI24751J29686_10000854 3300002459 Bacteria 7029
3 Ga0058863_11516165 3300004799 Unclassified 1330
4 Ga0065712_10155187 3300005290 Unclassified 1340
5 Ga0070683_100010595 3300005329 Bacteria 7926
6 Ga0070690_100136588 3300005330 Unclassified 1661
7 Ga0070670_100087305 3300005331 Bacteria 2681
8 Ga0070666_10132882 3300005335 Bacteria 1730
9 Ga0070680_100105350 3300005336 Bacteria 2344
10 Ga0070660_100003423 3300005339 Bacteria 10914
11 Ga0070689_100016822 3300005340 Bacteria 5360
12 Ga0070671_100030299 3300005355 Bacteria 4465
13 Ga0070673_100125361 3300005364 Bacteria 2148
14 Ga0070688_100098325 3300005365 Bacteria 1925
15 Ga0070659_100227821 3300005366 Bacteria 1540
16 Ga0070714_100017207 3300005435 Bacteria 5853
17 Ga0070714_100309389 3300005435 Bacteria 1475
18 Ga0070713_100060464 3300005436 Bacteria 3167
19 Ga0070681_10007699 3300005458 Bacteria 10532
20 Ga0070681_10062685 3300005458 Bacteria 3691
21 Ga0070681_10123030 3300005458 Bacteria 2527
22 Ga0068867_100138806 3300005459 Bacteria 1898
23 Ga0068867_100350942 3300005459 Bacteria 1231
24 Ga0070698_100213097 3300005471 Unclassified 1866
25 Ga0070698_100312195 3300005471 Unclassified 1503
26 Ga0070679_100017683 3300005530 Bacteria 6902
27 Ga0070679_100053129 3300005530 Bacteria 4033
28 Ga0070672_100030889 3300005543 Bacteria 4029
29 Ga0070686_100041294 3300005544 Unclassified 2883
30 Ga0070686_100061504 3300005544 Bacteria 2427
31 Ga0070696_100189234 3300005546 Unclassified 1531
32 Ga0070665_100503132 3300005548 Bacteria 1223
33 Ga0068855_100089460 3300005563 Bacteria 3554
34 Ga0068854_100177916 3300005578 Bacteria 1660
35 Ga0068852_100200788 3300005616 Bacteria 1887
36 Ga0068859_100015562 3300005617 Bacteria 7644
37 Ga0068864_100004180 3300005618 Bacteria 11866
38 Ga0068866_10018551 3300005718 Unclassified 3149
39 Ga0068863_100011623 3300005841 Bacteria 8518
40 Ga0081455_10137600 3300005937 Bacteria 1901
41 Ga0068871_100207289 3300006358 Bacteria 1694
42 Ga0075433_10135859 3300006852 Bacteria 2186
43 Ga0075434_100009805 3300006871 Bacteria 8954
44 Ga0075434_100018364 3300006871 Bacteria 6755
45 Ga0075434_100243590 3300006871 Bacteria 1818
46 Ga0075436_100048565 3300006914 Bacteria 2928
47 Ga0097620_100015563 3300006931 Bacteria 7644
48 Ga0075435_100000011 3300007076 Bacteria 110108
49 Ga0075435_100001015 3300007076 Bacteria 17809
50 Ga0075435_100031464 3300007076 Bacteria 4180
51 Ga0075435_100102317 3300007076 Unclassified 2374
52 Ga0075435_100273220 3300007076 Unclassified 1442
53 Ga0105240_10008471 3300009093 Bacteria 14709
54 Ga0111539_10094961 3300009094 Bacteria 3503
55 Ga0105245_10177437 3300009098 Bacteria 2033
56 Ga0114129_10032335 3300009147 Bacteria 7395
57 Ga0114129_10247408 3300009147 Bacteria 2395
58 Ga0114129_10320434 3300009147 Bacteria 2061
59 Ga0114129_10511175 3300009147 Bacteria 1567
60 Ga0105241_10042984 3300009174 Bacteria 3421
61 Ga0105242_10018257 3300009176 Bacteria 5482
62 Ga0105248_10036066 3300009177 Bacteria 5531
63 Ga0105248_10047762 3300009177 Unclassified 4800
64 Ga0105248_10254391 3300009177 Bacteria 1977
65 Ga0105237_10015462 3300009545 Bacteria 7942
66 Ga0105237_10015906 3300009545 Bacteria 7822
67 Ga0105249_10327788 3300009553 Unclassified 1544
68 Ga0105249_10362272 3300009553 Bacteria 1471
69 Ga0105239_10027116 3300010375 Bacteria 6306
70 Ga0157370_10246963 3300013104 Unclassified 1651
71 Ga0157374_10042008 3300013296 Bacteria 4216
72 Ga0163162_10116756 3300013306 Bacteria 2770
73 Ga0163162_10138991 3300013306 Bacteria 2541
74 Ga0163162_10275943 3300013306 Bacteria 1813
75 Ga0157375_10039374 3300013308 Bacteria 4549
76 Ga0157375_10039769 3300013308 Bacteria 4528
77 Ga0163163_10000001 3300014325 Bacteria 622185
78 Ga0163163_10024204 3300014325 Bacteria 5777
79 Ga0163163_10300273 3300014325 Unclassified 1658
80 Ga0157379_10227375 3300014968 Bacteria 1691
81 Ga0157376_10116333 3300014969 Bacteria 2362
82 Ga0157376_10181771 3300014969 Unclassified 1923
83 Ga0213876_10027317 3300021384 Bacteria 3013
84 Ga0213875_10005000 3300021388 Bacteria 7193
85 Ga0207680_10076952 3300025903 Bacteria 2085
86 Ga0207654_10053051 3300025911 Bacteria 2339
87 Ga0207707_10048639 3300025912 Bacteria 3694
88 Ga0207707_10204503 3300025912 Bacteria 1721
89 Ga0207695_10170665 3300025913 Bacteria 2101
90 Ga0207662_10053318 3300025918 Unclassified 2409
91 Ga0207657_10031599 3300025919 Bacteria 4793
92 Ga0207650_10012143 3300025925 Bacteria 5937
93 Ga0207650_10070770 3300025925 Unclassified 2622
94 Ga0207664_10005279 3300025929 Bacteria 8827
95 Ga0207644_10013901 3300025931 Bacteria 5377
96 Ga0207690_10108637 3300025932 Bacteria 1994
97 Ga0207686_10018752 3300025934 Bacteria 3922
98 Ga0207670_10336508 3300025936 Bacteria 1192
99 Ga0207704_10103962 3300025938 Bacteria 1901
100 Ga0207691_10007499 3300025940 Bacteria 10499
101 Ga0207711_10249466 3300025941 Bacteria 1629
102 Ga0207651_10046923 3300025960 Bacteria 2909
103 Ga0207640_10105812 3300025981 Unclassified 1983
104 Ga0207640_10160456 3300025981 Unclassified 1663
105 Ga0207677_10030110 3300026023 Bacteria 3460
106 Ga0207641_10003404 3300026088 Bacteria 14098
107 Ga0207648_10053046 3300026089 Bacteria 3545
108 Ga0207676_10007011 3300026095 Bacteria 7985
109 Ga0207683_10019852 3300026121 Bacteria 5741
110 Ga0207698_10155652 3300026142 Bacteria 1990
111 Ga0207428_10181046 3300027907 Bacteria 1592
112 Ga0268264_10292772 3300028381 Bacteria 1529
113 Ga0265332_10056128 3300031238 Bacteria 1687
114 Ga0265331_10026924 3300031250 Unclassified 2887
115 Ga0373930_0000468 3300034816 Bacteria 5447
116 Ga0373948_0001907 3300034817 Unclassified 2989
117 Ga0373950_0002798 3300034818 Bacteria 2439
118 Ga0373958_0000133 3300034819 Bacteria 8294
119 Ga0373958_0001652 3300034819 Bacteria 3029
120 Ga0373959_0001921 3300034820 Bacteria 3318
121 Ga0373959_0003347 3300034820 Bacteria 2550
122 Ga0373938_0000416 3300034957 Bacteria 6858
123 Ga0373928_0002341 3300035084 Bacteria 3681
124 Ga0373929_0000150 3300035085 Bacteria 12080
125 Ga0373929_0000527 3300035085 Bacteria 7370
126 Ga0373934_0001084 3300035086 Bacteria 9857
127 Ga0373940_0000915 3300035088 Bacteria 4984
128 Ga0373949_0002033 3300035090 Bacteria 5371
129 Ga0373949_0006597 3300035090 Bacteria 2551
130 Ga0373951_0000309 3300035091 Bacteria 15461
131 Ga0373952_0000033 3300035092 Bacteria 16098
132 Ga0373952_0001243 3300035092 Bacteria 4646
133 Ga0373932_0002593 3300035112 Bacteria 4508
134 Ga0373939_0000123 3300035114 Bacteria 22832
135 Ga0373939_0000957 3300035114 Bacteria 7199
136 Ga0373939_0004645 3300035114 Bacteria 3254
137 Ga0373941_0000132 3300035115 Bacteria 13133
138 Ga0373941_0000768 3300035115 Bacteria 6566
139 Ga0373956_0002394 3300035119 Bacteria 7662
140 Ga0373960_0000013 3300035121 Bacteria 22706
141 Ga0373943_0121176 3300035170 Bacteria 1390
142 Ga0373942_0000183 3300035207 Bacteria 15803
143 Ga0373942_0009215 3300035207 Bacteria 2307
144 Ga0373961_0001385 3300035241 Bacteria 7247
145 Ga0373962_0000261 3300035242 Bacteria 11276
146 Ga0373924_0064826 3300035410 Bacteria 1534
147 Ga0373931_0000262 3300035691 Bacteria 22291
148 Ga0373931_0001502 3300035691 Bacteria 10037
149 Ga0373935_0253854 3300035692 Bacteria 1231
150 Ga0373933_0000760 3300035724 Bacteria 19740
151 Ga0373937_0001957 3300036401 Bacteria 17264
152 Ga0373937_0079387 3300036401 Bacteria 3033
153 Ga0395900_0245851 3300037418 Unclassified 1793
154 Ga0436364_0741363 3300037853 Bacteria 50058
155 Ga0436365_0195165 3300039437 Bacteria 3710
156 Ga0436360_0696779 3300039438 Unclassified 1609
157 Ga0466967_0126713 3300045976 Bacteria 2366
158 Ga0495592_0034797 3300046454 Bacteria 3796
159 Ga0495592_0098288 3300046454 Unclassified 2089
160 Ga0495629_0123710 3300046459 Bacteria 1802
161 Ga0495651_0039868 3300046462 Unclassified 3654
162 Ga0495653_0000861 3300046463 Bacteria 23407
163 Ga0495580_0205612 3300046472 Bacteria 1356
164 Ga0495662_0017222 3300046476 Unclassified 3498
165 Ga0495664_0192535 3300046477 Bacteria 1236
166 Ga0495628_0065953 3300046516 Unclassified 2830
167 Ga0495652_0004638 3300046529 Bacteria 13105
168 Ga0495645_0021275 3300046543 Unclassified 4687
169 Ga0495635_0051390 3300046663 Unclassified 2840
170 Ga0495599_0003150 3300046678 Bacteria 9612
171 Ga0495623_0196859 3300046679 Bacteria 1161
172 Ga0495646_0059247 3300046680 Unclassified 2287
173 Ga0495658_0057910 3300046683 Bacteria 2215
174 Ga0495674_0132398 3300047319 Unclassified 2100
175 Ga0495680_0134194 3300047322 Unclassified 1816
176 Ga0496106_0385601 3300048909 Unclassified 1126
177 Ga0496107_0224726 3300048910 Bacteria 1397
178 Ga0496109_0128209 3300048912 Bacteria 2367
179 Ga0496109_0186730 3300048912 Bacteria 1948
180 Ga0496114_0071407 3300048917 Bacteria 2918
181 Ga0501073_0002003 3300049589 Bacteria 15199
182 nmdc:mga05p37_317726_c1 3300050507 Bacteria 1844
183 nmdc:mga09592_29083_c1 3300050508 Bacteria 4595
184 nmdc:mga08y16_73248_c1 3300050511 Bacteria 3569
185 nmdc:mga0n895_1204_c1 3300050512 Bacteria 19081
186 nmdc:mga0n895_141944_c1 3300050512 Bacteria 2430
187 nmdc:mga0n895_54924_c1 3300050512 Bacteria 3919
188 nmdc:mga0rr50_174336_c1 3300050513 Unclassified 1754
189 nmdc:mga0rr50_276_c1 3300050513 Bacteria 27928
190 nmdc:mga0rr50_3_c1 3300050513 Bacteria 353622
191 nmdc:mga08x19_25174_c1 3300050514 Bacteria 3706
192 nmdc:mga0a205_3623_c1 3300050515 Bacteria 13824
193 nmdc:mga0a205_4946_c1 3300050515 Bacteria 11985
194 Ga0070687_100080478
195 JGI24751J29686_10000854
196 Ga0058863_11516165
197 Ga0065712_10155187
198 Ga0070683_100010595
199 Ga0070690_100136588
200 Ga0070670_100087305
201 Ga0070666_10132882
202 Ga0070680_100105350
203 Ga0070660_100003423
204 Ga0070689_100016822
205 Ga0070671_100030299
206 Ga0070673_100125361
207 Ga0070688_100098325
208 Ga0070659_100227821
209 Ga0070714_100017207
210 Ga0070714_100309389
211 Ga0070713_100060464
212 Ga0070681_10007699
213 Ga0070681_10062685
214 Ga0070681_10123030
215 Ga0068867_100138806
216 Ga0068867_100350942
217 Ga0070698_100213097
218 Ga0070698_100312195
219 Ga0070679_100017683
220 Ga0070679_100053129
221 Ga0070672_100030889
222 Ga0070686_100041294
223 Ga0070686_100061504
224 Ga0070696_100189234
225 Ga0070665_100503132
226 Ga0068855_100089460
227 Ga0068854_100177916
228 Ga0068852_100200788
229 Ga0068859_100015562
230 Ga0068864_100004180
231 Ga0068866_10018551
232 Ga0068863_100011623
233 Ga0081455_10137600
234 Ga0068871_100207289
235 Ga0075433_10135859
236 Ga0075434_100009805
237 Ga0075434_100018364
238 Ga0075434_100243590
239 Ga0075436_100048565
240 Ga0097620_100015563
241 Ga0075435_100000011
242 Ga0075435_100001015
243 Ga0075435_100031464
244 Ga0075435_100102317
245 Ga0075435_100273220
246 Ga0105240_10008471
247 Ga0111539_10094961
248 Ga0105245_10177437
249 Ga0114129_10032335
250 Ga0114129_10247408
251 Ga0114129_10320434
252 Ga0114129_10511175
253 Ga0105241_10042984
254 Ga0105242_10018257
255 Ga0105248_10036066
256 Ga0105248_10047762
257 Ga0105248_10254391
258 Ga0105237_10015462
259 Ga0105237_10015906
260 Ga0105249_10327788
261 Ga0105249_10362272
262 Ga0105239_10027116
263 Ga0157370_10246963
264 Ga0157374_10042008
265 Ga0163162_10116756
266 Ga0163162_10138991
267 Ga0163162_10275943
268 Ga0157375_10039374
269 Ga0157375_10039769
270 Ga0163163_10000001
271 Ga0163163_10024204
272 Ga0163163_10300273
273 Ga0157379_10227375
274 Ga0157376_10116333
275 Ga0157376_10181771
276 Ga0213876_10027317
277 Ga0213875_10005000
278 Ga0207680_10076952
279 Ga0207654_10053051
280 Ga0207707_10048639
281 Ga0207707_10204503
282 Ga0207695_10170665
283 Ga0207662_10053318
284 Ga0207657_10031599
285 Ga0207650_10012143
286 Ga0207650_10070770
287 Ga0207664_10005279
288 Ga0207644_10013901
289 Ga0207690_10108637
290 Ga0207686_10018752
291 Ga0207670_10336508
292 Ga0207704_10103962
293 Ga0207691_10007499
294 Ga0207711_10249466
295 Ga0207651_10046923
296 Ga0207640_10105812
297 Ga0207640_10160456
298 Ga0207677_10030110
299 Ga0207641_10003404
300 Ga0207648_10053046
301 Ga0207676_10007011
302 Ga0207683_10019852
303 Ga0207698_10155652
304 Ga0207428_10181046
305 Ga0268264_10292772
306 Ga0265332_10056128
307 Ga0265331_10026924
308 Ga0373930_0000468
309 Ga0373948_0001907
310 Ga0373950_0002798
311 Ga0373958_0000133
312 Ga0373958_0001652
313 Ga0373959_0001921
314 Ga0373959_0003347
315 Ga0373938_0000416
316 Ga0373928_0002341
317 Ga0373929_0000150
318 Ga0373929_0000527
319 Ga0373934_0001084
320 Ga0373940_0000915
321 Ga0373949_0002033
322 Ga0373949_0006597
323 Ga0373951_0000309
324 Ga0373952_0000033
325 Ga0373952_0001243
326 Ga0373932_0002593
327 Ga0373939_0000123
328 Ga0373939_0000957
329 Ga0373939_0004645
330 Ga0373941_0000132
331 Ga0373941_0000768
332 Ga0373956_0002394
333 Ga0373960_0000013
334 Ga0373943_0121176
335 Ga0373942_0000183
336 Ga0373942_0009215
337 Ga0373961_0001385
338 Ga0373962_0000261
339 Ga0373924_0064826
340 Ga0373931_0000262
341 Ga0373931_0001502
342 Ga0373935_0253854
343 Ga0373933_0000760
344 Ga0373937_0001957
345 Ga0373937_0079387
346 Ga0395900_0245851
347 Ga0436364_0741363
348 Ga0436365_0195165
349 Ga0436360_0696779
350 Ga0466967_0126713
351 Ga0495592_0034797
352 Ga0495592_0098288
353 Ga0495629_0123710
354 Ga0495651_0039868
355 Ga0495653_0000861
356 Ga0495580_0205612
357 Ga0495662_0017222
358 Ga0495664_0192535
359 Ga0495628_0065953
360 Ga0495652_0004638
361 Ga0495645_0021275
362 Ga0495635_0051390
363 Ga0495599_0003150
364 Ga0495623_0196859
365 Ga0495646_0059247
366 Ga0495658_0057910
367 Ga0495674_0132398
368 Ga0495680_0134194
369 Ga0496106_0385601
370 Ga0496107_0224726
371 Ga0496109_0128209
372 Ga0496109_0186730
373 Ga0496114_0071407
374 Ga0501073_0002003
375 nmdc:mga05p37_317726_c1
376 nmdc:mga09592_29083_c1
377 nmdc:mga08y16_73248_c1
378 nmdc:mga0n895_1204_c1
379 nmdc:mga0n895_141944_c1
380 nmdc:mga0n895_54924_c1
381 nmdc:mga0rr50_174336_c1
382 nmdc:mga0rr50_276_c1
383 nmdc:mga0rr50_3_c1
384 nmdc:mga08x19_25174_c1
385 nmdc:mga0a205_3623_c1
386 nmdc:mga0a205_4946_c1

MSA Aligner

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Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
6m1u-assembly1.cif.gz_A crystal structure of the vertebrate conserved region (vcr) of human mettl16 0.7988 139 166
4rt5-assembly1.cif.gz_B the crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase protein from planctomyces limnophilus dsm 3776 0.781 57 181
5hcw-assembly5.cif.gz_A crystal structure of c-as lyase with mutations y100h and v102f (monoclinic form) 0.7624 53 176
6xa0-assembly1.cif.gz_A crystal structure of c-as lyase with mutation k105r with ni(ii) 0.7613 53 176
5v0f-assembly1.cif.gz_A crystal structure of c-as lyase with mutation k105a and substrate roxarsone 0.7549 60 177
ID Description Score Start End Superfamily
2kjzB01 Alpha Beta;2-Layer Sandwich;Signal recognition particle alu RNA binding heterodimer, srp9/1; 0.8206 210 257 3.30.720.120
3vcxB01 Alpha Beta;2-Layer Sandwich;Signal recognition particle alu RNA binding heterodimer, srp9/1; 0.8184 212 258 3.30.720.120
3lm4B01 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.7863 54 176 3.10.180.10
3b59F02 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.7832 56 177 3.10.180.10
1mpyD01 Alpha Beta;Roll;2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1;2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.7757 54 176 3.10.180.10
ID Description Score Start End GO Terms
AF-A0A2V8DSV9-F1-model_v4 VOC domain-containing protein 0.9656 130 178
AF-A0A2G4IDC2-F1-model_v4 Glyoxalase 0.9189 20 358
AF-A0A258SIJ4-F1-model_v4 Glyoxalase 0.9189 22 366
AF-A0A258SIJ4-F1-model_v4 Glyoxalase 0.9082 22 366
AF-A0A2G4IDC2-F1-model_v4 Glyoxalase 0.9006 20 358

Map