F296425

General Info

Members Datasets Scaffolds Average Seq Length
192 182 123 288

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2906643746|2906648863
Length 319
Sequence NRATPIWLPSRSSPRDRAFAYRLKREERRHMSRPRFVSFTRNGTPGYGLLGDQGVVDLSGRHGKRWRTLREVIEVGALVSLAEESAGLPADFPVTDIRYEIPIPAPEKIICVGVNFPDRNEEYKDGQAAPSNPSLFIRFPRSFTGHEQALLRPPESPQLDYEGEIVIVIGKGGRRIPQSEALDHIAAISLCNEGTIRDWVRHAKFNVTQGKNFDRTGSMGPWLIPYTDESQLADIKLETRINGEVRQQDRTSRMIFSFRKIINYISTFTMLVPGDVIVTGTPTGAGARFEPPIWLKPGDVVEVEAEGIGTLRNTIADEA

Samples

Sample ID Description Type Environment
1 2508501122 Ensifer yinggardensis WSM1721 Isolate Nodule
2 2510065059 Mesorhizobium ciceri WSM4083 Isolate Nodule
3 2534681786 Brucella suis 92/29 Isolate Unclassified
4 2599185352 Sinorhizobium sp. NFACC03 Isolate Rhizoplane
5 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
6 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
7 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
8 2643221557 Ensifer sp. Root558 Isolate Unclassified
9 2643221580 Devosia sp. Root635 Isolate Unclassified
10 2643221610 Ensifer sp. Root74 Isolate Unclassified
11 2643221618 Ensifer sp. Root231 Isolate Unclassified
12 2643221655 Ensifer sp. Root1252 Isolate Unclassified
13 2643221668 Ensifer sp. Root423 Isolate Unclassified
14 2643221675 Ensifer sp. Root1298 Isolate Unclassified
15 2643221680 Ensifer sp. Root1312 Isolate Unclassified
16 2643221712 Ensifer sp. Root258 Isolate Unclassified
17 2643221723 Ensifer sp. Root278 Isolate Unclassified
18 2643221726 Ensifer sp. Root954 Isolate Unclassified
19 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
20 2718217927 Rhizobium sp. N324 Isolate Nodule
21 2738543024 Aminobacter sp. AP02 Isolate Unclassified
22 2808606372 Agromyces sp. 23-23 Isolate Unclassified
23 2824600985 Bradyrhizobium sp.HAMBI 2135 Isolate Unclassified
24 2824609381 Bradyrhizobium sp. HAMBI 2134 Isolate Unclassified
25 2824653114 Bradyrhizobium sp. HAMBI 2142 Isolate Unclassified
26 2842038055 Bradyrhizobium centrosematis SEMIA 424 Isolate Nodule
27 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
28 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
29 2844002411 Mesorhizobium sp. M7D.F.Ca.US.005.01.1.1 Isolate Nodule
30 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
31 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
32 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
33 2869169390 Mesorhizobium sp. M7A.F.Ca.CA.001.10.2.1 Isolate Nodule
34 2869242130 Mesorhizobium sp. M7A.F.Ca.CA.004.11.2.1 Isolate Nodule
35 2871481445 Mesorhizobium sp. M7A.F.Ca.CA.004.02.1.1 Isolate Nodule
36 2874116593 Mesorhizobium sp. M7A.F.Ca.CA.004.08.2.1 Isolate Nodule
37 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
38 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
39 2876386047 Mesorhizobium sp. M7A.F.Ca.CA.004.07.1.1 Isolate Nodule
40 2876420981 Mesorhizobium sp. M7A.F.Ca.CA.004.08.1.1 Isolate Nodule
41 2878738818 Mesorhizobium sp. M8A.F.Ca.ET.218.01.1.1 Isolate Nodule
42 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
43 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
44 2885366525 Bradyrhizobium sp. LVM 105 Isolate Unclassified
45 2888419890 Bradyrhizobium sp. 1(2017) 63S1MB Isolate Unclassified
46 2898795034 Rhodobacter sp. SGA-6-6 Isolate Rhizosphere
47 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
48 2906401398 Mesorhizobium sp. M7A.F.Ca.CA.004.10.1.1 Isolate Nodule
49 2906427513 Mesorhizobium sp. M7A.F.Ca.CA.004.05.1.1 Isolate Nodule
50 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
51 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
52 2924741084 Mesorhizobium sp. M7A.F.Ca.CA.004.09.1.2 Isolate Nodule
53 2924776078 Mesorhizobium sp. M8A.F.Ca.ET.213.01.1.1 Isolate Nodule
54 2958108152 Mesorhizobium sp. M7A.F.Ca.CA.004.11.1.1 Isolate Nodule
55 2961183825 Mesorhizobium sp. M7A.F.Ca.CA.001.12.1.1 Isolate Nodule
56 2970532167 Mesorhizobium sp. M7A.F.Ca.CA.002.05.1.1 Isolate Nodule
57 2970627176 Mesorhizobium sp. M7A.F.Ca.US.006.01.2.1 Isolate Nodule
58 2977851361 Mesorhizobium sp. M7A.F.Ca.CA.004.06.2.1 Isolate Nodule
59 2977864932 Mesorhizobium tamadayense DSM 28320 Isolate Nodule
60 2977907340 Mesorhizobium sp. M7A.F.Ca.CA.004.12.1.1 Isolate Nodule
61 2979764755 Mesorhizobium sp. M7A.F.Ca.CA.004.05.2.1 Isolate Nodule
62 2989349275 Shinella kummerowiae CCBAU 25048 Isolate Unclassified
63 3004248173 Mesorhizobium sp. M7A.F.Ca.CA.004.06.1.1 Isolate Nodule
64 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
65 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
66 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
67 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
68 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
69 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
70 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
71 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
72 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
73 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
74 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
75 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
76 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
77 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
78 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
79 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
80 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
81 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
82 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
83 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
84 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
85 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
86 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
87 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
88 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
89 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
90 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
91 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
92 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
93 3300006941 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW Metagenome Nodule
94 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
95 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
96 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
97 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
98 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
99 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
100 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
101 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
102 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
103 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
104 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
105 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
106 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
107 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
108 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
110 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
111 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
112 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
114 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
115 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
116 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
118 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
119 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
133 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
134 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
135 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
137 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
138 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
139 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
140 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
141 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
142 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
143 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
144 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
145 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
146 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
147 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
148 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
149 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
150 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
151 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
152 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
153 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
154 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
155 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
156 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
157 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
158 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
161 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
162 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
165 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
168 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
169 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
170 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
171 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
174 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
178 8002285264 Aminobacter anthyllidis LMG 26462 Isolate Nodule
179 8005258706 Rhizobium sp. R693 Isolate Nodule
180 8005275841 Rhizobium sp. N4311 Isolate Nodule
181 8005301065 Rhizobium bangladeshense 1017 Isolate Nodule
182 8056375014 Rhizobium redzepovicii 18T Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 64.06
Metatranscriptomes 0
Isolates 35.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.31
Nodule 23.44
Rhizoplane 1.04
Rhizosphere 38.02
Stem 0
Stem Tuber 0
Unclassified 17.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1000030 3300002987 Bacteria 102429
2 JGI25151J46595_10025855 3300003187 Bacteria 2380
3 JGI25165J46597_1000020 3300003214 Bacteria 370477
4 JGI25165J46597_1000412 3300003214 Bacteria 44966
5 JGI25153J46596_10000151 3300003215 Bacteria 70139
6 JGI25160J50197_1000075 3300003354 Bacteria 102429
7 JGI25161J50226_1000316 3300003374 Bacteria 26515
8 Ga0055526_1002641 3300003771 Bacteria 11971
9 Ga0055524_1000960 3300003775 Bacteria 18186
10 Ga0055536_1003695 3300003781 Bacteria 8124
11 Ga0055540_1022514 3300003792 Bacteria 1610
12 Ga0055543_1003338 3300004625 Bacteria 4791
13 Ga0065165_1000206 3300005262 Bacteria 102467
14 Ga0070689_100036474 3300005340 Bacteria 3760
15 Ga0070713_100622079 3300005436 Bacteria 1027
16 Ga0070694_100073745 3300005444 Bacteria 2358
17 Ga0070698_100007027 3300005471 Bacteria 12193
18 Ga0070679_100037027 3300005530 Bacteria 4844
19 Ga0070672_100115294 3300005543 Bacteria 2194
20 Ga0070695_100087805 3300005545 Bacteria 2069
21 Ga0070665_100474230 3300005548 Bacteria 1262
22 Ga0081538_10000477 3300005981 Bacteria 45047
23 Ga0081540_1018102 3300005983 Bacteria 4336
24 Ga0075365_10063019 3300006038 Bacteria 2481
25 Ga0075363_100082174 3300006048 Bacteria 1763
26 Ga0075364_10026654 3300006051 Bacteria 3688
27 Ga0075367_10014276 3300006178 Bacteria 4296
28 Ga0075367_10035856 3300006178 Bacteria 2873
29 Ga0075430_100333509 3300006846 Bacteria 1253
30 Ga0075433_10254007 3300006852 Bacteria 1559
31 Ga0075429_100471400 3300006880 Bacteria 1100
32 Ga0099825_1031742 3300006941 Bacteria 2209
33 Ga0099825_1032134 3300006941 Bacteria 2158
34 Ga0099824_1007408 3300006942 Bacteria 14551
35 Ga0099822_1018218 3300006943 Bacteria 7346
36 Ga0099823_1024506 3300006944 Bacteria 5452
37 Ga0105240_10120101 3300009093 Bacteria 3165
38 Ga0111539_10020292 3300009094 Bacteria 8187
39 Ga0111539_10266891 3300009094 Bacteria 1992
40 Ga0105245_10285242 3300009098 Bacteria 1615
41 Ga0114129_10035909 3300009147 Bacteria 6999
42 Ga0114129_10548876 3300009147 Bacteria 1503
43 Ga0105248_10516826 3300009177 Bacteria 1346
44 Ga0105237_10004427 3300009545 Bacteria 16284
45 Ga0105238_10105713 3300009551 Bacteria 2796
46 Ga0105249_10362852 3300009553 Bacteria 1470
47 Ga0105239_10017021 3300010375 Bacteria 8036
48 Ga0105239_10769433 3300010375 Bacteria 1102
49 Ga0157371_10010156 3300013102 Bacteria 7355
50 Ga0209436_100823 3300025208 Bacteria 12589
51 Ga0209563_101384 3300025230 Bacteria 6524
52 Ga0209437_100042 3300025233 Bacteria 444095
53 Ga0209233_1000047 3300025261 Bacteria 459614
54 Ga0209233_1000054 3300025261 Bacteria 439669
55 Ga0209130_1000154 3300025284 Bacteria 102645
56 Ga0209676_1004026 3300025292 Bacteria 8461
57 Ga0209025_1000032 3300025294 Bacteria 416141
58 Ga0209025_1065539 3300025294 Bacteria 1326
59 Ga0209564_1000025 3300025295 Bacteria 520535
60 Ga0209758_1000120 3300025297 Bacteria 192212
61 Ga0209050_1005957 3300025298 Bacteria 7411
62 Ga0209256_1000073 3300025299 Bacteria 237553
63 Ga0209256_1000907 3300025299 Bacteria 36321
64 Ga0207426_1000286 3300025302 Bacteria 102853
65 Ga0209051_1002477 3300025303 Bacteria 13187
66 Ga0207647_10043681 3300025904 Bacteria 2803
67 Ga0207671_10034078 3300025914 Bacteria 3785
68 Ga0207657_10001824 3300025919 Bacteria 22979
69 Ga0207657_10014977 3300025919 Bacteria 7534
70 Ga0207652_10277993 3300025921 Bacteria 1510
71 Ga0207694_10068409 3300025924 Bacteria 2773
72 Ga0207659_10345767 3300025926 Unclassified 1233
73 Ga0207706_10027991 3300025933 Bacteria 5036
74 Ga0207712_10201016 3300025961 Bacteria 1580
75 Ga0207639_10006277 3300026041 Bacteria 8071
76 Ga0207678_10245094 3300026067 Bacteria 1535
77 Ga0207648_10209590 3300026089 Bacteria 1729
78 Ga0207674_10286264 3300026116 Bacteria 1596
79 Ga0209389_1000080 3300027296 Bacteria 89649
80 Ga0209489_100027 3300027361 Bacteria 188074
81 Ga0209700_100022 3300027363 Bacteria 229977
82 Ga0268266_10176661 3300028379 Bacteria 1942
83 Ga0265337_1003078 3300028556 Bacteria 7358
84 Ga0265334_10000940 3300028573 Bacteria 14526
85 Ga0307515_10325729 3300028794 Bacteria 1199
86 Ga0265338_10003861 3300028800 Bacteria 20783
87 Ga0265313_10008702 3300031595 Bacteria 6708
88 Ga0373927_0000177 3300035695 Bacteria 50406
89 Ga0373925_0000912 3300037068 Bacteria 26965
90 Ga0395901_0119217 3300038443 Bacteria 2773
91 Ga0436360_1322386 3300039438 Bacteria 4600
92 Ga0439465_0027941 3300041413 Bacteria 1788
93 Ga0451577_0261853 3300042876 Bacteria 1566
94 Ga0466965_0005988 3300044683 Bacteria 5494
95 Ga0466963_0005557 3300044694 Bacteria 7387
96 Ga0466970_0000134 3300044765 Bacteria 33918
97 Ga0466960_0068097 3300044901 Bacteria 1765
98 Ga0495629_0077435 3300046459 Bacteria 2321
99 Ga0495638_0004887 3300046460 Bacteria 10075
100 Ga0495580_0046525 3300046472 Bacteria 3078
101 Ga0495662_0061767 3300046476 Bacteria 1810
102 Ga0495586_0041189 3300046535 Bacteria 2487
103 Ga0495634_0103523 3300046642 Bacteria 1837
104 Ga0495674_0277364 3300047319 Bacteria 1374
105 Ga0495686_0021447 3300047472 Bacteria 4290
106 Ga0496115_0293451 3300048918 Bacteria 1333
107 Ga0496125_0000101 3300048928 Bacteria 202248
108 Ga0496126_0251871 3300048929 Bacteria 1471
109 Ga0501031_0108085 3300049568 Bacteria 1816
110 Ga0501043_0037747 3300049579 Bacteria 3799
111 Ga0501070_0090766 3300049586 Bacteria 2528
112 Ga0501035_0001605 3300049822 Bacteria 22866
113 Ga0501044_0199978 3300049823 Bacteria 1957
114 nmdc:mga03n38_236928_c1 3300050490 Bacteria 959
115 nmdc:mga00v17_84554_c1 3300050491 Bacteria 1986
116 nmdc:mga0yw44_191151_c1 3300050492 Bacteria 1350
117 nmdc:mga0k408_1498_c1 3300050493 Bacteria 12606
118 nmdc:mga06z11_20774_c1 3300050494 Bacteria 3040
119 nmdc:mga05p37_76568_c1 3300050507 Bacteria 4118
120 nmdc:mga0qj67_337516_c1 3300050509 Bacteria 1219
121 nmdc:mga06r32_33949_c1 3300050510 Bacteria 4808
122 nmdc:mga0n895_23774_c1 3300050512 Bacteria 5765
123 nmdc:mga0a205_169437_c1 3300050515 Bacteria 2079

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046460 Ga0495638_0004887 Ga0495638_0004887_7722_8534 270
2 3300025919 Ga0207657_10014977 Ga0207657_100149777 273
3 3300025933 Ga0207706_10027991 Ga0207706_100279914 273
4 3300026067 Ga0207678_10245094 Ga0207678_102450942 273
5 3300009553 Ga0105249_10362852 Ga0105249_103628521 274
6 3300006051 Ga0075364_10026654 Ga0075364_100266542 275
7 3300006178 Ga0075367_10035856 Ga0075367_100358563 275
8 3300050491 nmdc:mga00v17_84554_c1 nmdc:mga00v17_84554_c1_804_1655 275
9 3300050493 nmdc:mga0k408_1498_c1 nmdc:mga0k408_1498_c1_770_1621 275
10 3300050494 nmdc:mga06z11_20774_c1 nmdc:mga06z11_20774_c1_987_1838 275
11 iso_pu_bacteria 2808606372 2808900102 278
12 iso_pu_bacteria 2898795034 2898795428 280
13 3300006038 Ga0075365_10063019 Ga0075365_100630193 281
14 3300006048 Ga0075363_100082174 Ga0075363_1000821742 281
15 3300006178 Ga0075367_10014276 Ga0075367_100142765 281
16 3300050490 nmdc:mga03n38_236928_c1 nmdc:mga03n38_236928_c1_20_877 281
17 3300005981 Ga0081538_10000477 Ga0081538_100004775 283
18 3300048918 Ga0496115_0293451 Ga0496115_0293451_111_977 283
19 iso_pu_bacteria 2534681786 2535485958 283
20 3300006852 Ga0075433_10254007 Ga0075433_102540073 284
21 3300009094 Ga0111539_10020292 Ga0111539_100202922 284
22 3300050509 nmdc:mga0qj67_337516_c1 nmdc:mga0qj67_337516_c1_22_876 284
23 3300050512 nmdc:mga0n895_23774_c1 nmdc:mga0n895_23774_c1_2994_3848 284
24 iso_pu_bacteria 2510065059 2510315016 284
25 iso_pu_bacteria 2643221547 2643757943 284
26 iso_pu_bacteria 2643221580 2643911176 284
27 iso_pu_bacteria 2869169390 2869170493 284
28 iso_pu_bacteria 2869242130 2869249463 284
29 iso_pu_bacteria 2871481445 2871486561 284
30 iso_pu_bacteria 2874116593 2874119131 284
31 iso_pu_bacteria 2874620515 2874628345 284
32 iso_pu_bacteria 2876369609 2876371236 284
33 iso_pu_bacteria 2876386047 2876390243 284
34 iso_pu_bacteria 2876420981 2876427680 284
35 iso_pu_bacteria 2881161766 2881163295 284
36 iso_pu_bacteria 2904666416 2904674036 284
37 iso_pu_bacteria 2906401398 2906405746 284
38 iso_pu_bacteria 2906427513 2906433674 284
39 iso_pu_bacteria 2924741084 2924742271 284
40 iso_pu_bacteria 2958108152 2958111821 284
41 iso_pu_bacteria 2961183825 2961184252 284
42 iso_pu_bacteria 2970532167 2970534377 284
43 iso_pu_bacteria 2970627176 2970632671 284
44 iso_pu_bacteria 2977851361 2977856712 284
45 iso_pu_bacteria 2977864932 2977867752 284
46 iso_pu_bacteria 2977907340 2977907988 284
47 iso_pu_bacteria 2979764755 2979767003 284
48 iso_pu_bacteria 3004248173 3004253674 284
49 3300009147 Ga0114129_10035909 Ga0114129_100359098 285
50 3300013102 Ga0157371_10010156 Ga0157371_100101565 285
51 3300025904 Ga0207647_10043681 Ga0207647_100436812 285
52 3300025919 Ga0207657_10001824 Ga0207657_100018248 285
53 3300050507 nmdc:mga05p37_76568_c1 nmdc:mga05p37_76568_c1_903_1760 285
54 iso_pu_bacteria 2508501122 2509111109 285
55 iso_pu_bacteria 2599185352 2600193852 285
56 iso_pu_bacteria 2615840698 2616552954 285
57 iso_pu_bacteria 2617270742 2617381274 285
58 iso_pu_bacteria 2643221557 2643805289 285
59 iso_pu_bacteria 2643221610 2644064133 285
60 iso_pu_bacteria 2643221618 2644105332 285
61 iso_pu_bacteria 2643221655 2644309819 285
62 iso_pu_bacteria 2643221668 2644375739 285
63 iso_pu_bacteria 2643221675 2644415965 285
64 iso_pu_bacteria 2643221680 2644449006 285
65 iso_pu_bacteria 2643221712 2644614392 285
66 iso_pu_bacteria 2643221723 2644674216 285
67 iso_pu_bacteria 2643221726 2644686470 285
68 iso_pu_bacteria 2690316117 2692319264 285
69 iso_pu_bacteria 2718217927 2719389857 285
70 iso_pu_bacteria 2738543024 2739305593 285
71 iso_pu_bacteria 2824600985 2824605712 285
72 iso_pu_bacteria 2824609381 2824611725 285
73 iso_pu_bacteria 2824653114 2824658216 285
74 iso_pu_bacteria 2842482326 2842485623 285
75 iso_pu_bacteria 2844002411 2844008708 285
76 iso_pu_bacteria 2847417321 2847422227 285
77 iso_pu_bacteria 2857509624 2857511303 285
78 iso_pu_bacteria 2878738818 2878745849 285
79 iso_pu_bacteria 2885366525 2885370232 285
80 iso_pu_bacteria 2888419890 2888425867 285
81 iso_pu_bacteria 2913295892 2913299986 285
82 iso_pu_bacteria 2924776078 2924784248 285
83 iso_pu_bacteria 643692032 643823867 285
84 iso_pu_bacteria 8002285264 8002289713 285
85 iso_pu_bacteria 8005258706 8005260486 285
86 iso_pu_bacteria 8005275841 8005275980 285
87 iso_pu_bacteria 8005301065 8005301698 285
88 iso_pu_bacteria 8056375014 8056381799 285
89 3300005444 Ga0070694_100073745 Ga0070694_1000737453 286
90 3300005471 Ga0070698_100007027 Ga0070698_1000070277 286
91 3300005543 Ga0070672_100115294 Ga0070672_1001152942 286
92 3300005545 Ga0070695_100087805 Ga0070695_1000878053 286
93 3300005983 Ga0081540_1018102 Ga0081540_10181021 286
94 3300006846 Ga0075430_100333509 Ga0075430_1003335092 286
95 3300009147 Ga0114129_10548876 Ga0114129_105488762 286
96 3300025961 Ga0207712_10201016 Ga0207712_102010163 286
97 3300039438 Ga0436360_1322386 Ga0436360_1322386_1668_2573 286
98 3300042876 Ga0451577_0261853 Ga0451577_0261853_634_1497 286
99 iso_pu_bacteria 2989349275 2989354479 286
100 3300006880 Ga0075429_100471400 Ga0075429_1004714001 287
101 3300050510 nmdc:mga06r32_33949_c1 nmdc:mga06r32_33949_c1_3277_4140 287
102 3300050515 nmdc:mga0a205_169437_c1 nmdc:mga0a205_169437_c1_65_928 287
103 3300003214 JGI25165J46597_1000020 JGI25165J46597_1000020278 288
104 3300006941 Ga0099825_1032134 Ga0099825_10321343 288
105 3300006942 Ga0099824_1007408 Ga0099824_100740810 288
106 3300006943 Ga0099822_1018218 Ga0099822_10182186 288
107 3300009093 Ga0105240_10120101 Ga0105240_101201013 288
108 3300009094 Ga0111539_10266891 Ga0111539_102668912 288
109 3300009545 Ga0105237_10004427 Ga0105237_1000442715 288
110 3300009551 Ga0105238_10105713 Ga0105238_101057133 288
111 3300010375 Ga0105239_10017021 Ga0105239_100170219 288
112 3300025230 Ga0209563_101384 Ga0209563_1013844 288
113 3300025261 Ga0209233_1000047 Ga0209233_100004757 288
114 3300025914 Ga0207671_10034078 Ga0207671_100340783 288
115 3300025924 Ga0207694_10068409 Ga0207694_100684092 288
116 3300026041 Ga0207639_10006277 Ga0207639_100062778 288
117 3300028794 Ga0307515_10325729 Ga0307515_103257291 288
118 3300048928 Ga0496125_0000101 Ga0496125_0000101_154593_155471 288
119 3300048929 Ga0496126_0251871 Ga0496126_0251871_46_921 288
120 3300002987 JGI25159J45721_1000030 JGI25159J45721_100003051 289
121 3300003187 JGI25151J46595_10025855 JGI25151J46595_100258552 289
122 3300003214 JGI25165J46597_1000412 JGI25165J46597_100041232 289
123 3300003215 JGI25153J46596_10000151 JGI25153J46596_1000015161 289
124 3300003354 JGI25160J50197_1000075 JGI25160J50197_100007551 289
125 3300003374 JGI25161J50226_1000316 JGI25161J50226_10003162 289
126 3300003771 Ga0055526_1002641 Ga0055526_10026412 289
127 3300003775 Ga0055524_1000960 Ga0055524_100096014 289
128 3300003781 Ga0055536_1003695 Ga0055536_10036952 289
129 3300003792 Ga0055540_1022514 Ga0055540_10225142 289
130 3300004625 Ga0055543_1003338 Ga0055543_10033384 289
131 3300005262 Ga0065165_1000206 Ga0065165_100020651 289
132 3300005340 Ga0070689_100036474 Ga0070689_1000364742 289
133 3300005436 Ga0070713_100622079 Ga0070713_1006220791 289
134 3300005530 Ga0070679_100037027 Ga0070679_1000370275 289
135 3300005548 Ga0070665_100474230 Ga0070665_1004742301 289
136 3300006941 Ga0099825_1031742 Ga0099825_10317421 289
137 3300006944 Ga0099823_1024506 Ga0099823_10245063 289
138 3300009098 Ga0105245_10285242 Ga0105245_102852422 289
139 3300009177 Ga0105248_10516826 Ga0105248_105168261 289
140 3300010375 Ga0105239_10769433 Ga0105239_107694332 289
141 3300025208 Ga0209436_100823 Ga0209436_10082311 289
142 3300025233 Ga0209437_100042 Ga0209437_100042371 289
143 3300025261 Ga0209233_1000054 Ga0209233_1000054290 289
144 3300025284 Ga0209130_1000154 Ga0209130_100015453 289
145 3300025292 Ga0209676_1004026 Ga0209676_10040268 289
146 3300025294 Ga0209025_1000032 Ga0209025_1000032339 289
147 3300025294 Ga0209025_1065539 Ga0209025_10655392 289
148 3300025295 Ga0209564_1000025 Ga0209564_1000025440 289
149 3300025297 Ga0209758_1000120 Ga0209758_100012088 289
150 3300025298 Ga0209050_1005957 Ga0209050_10059573 289
151 3300025299 Ga0209256_1000073 Ga0209256_1000073198 289
152 3300025299 Ga0209256_1000907 Ga0209256_100090717 289
153 3300025302 Ga0207426_1000286 Ga0207426_100028653 289
154 3300025303 Ga0209051_1002477 Ga0209051_100247710 289
155 3300025921 Ga0207652_10277993 Ga0207652_102779932 289
156 3300025926 Ga0207659_10345767 Ga0207659_103457672 289
157 3300026089 Ga0207648_10209590 Ga0207648_102095902 289
158 3300026116 Ga0207674_10286264 Ga0207674_102862642 289
159 3300027296 Ga0209389_1000080 Ga0209389_100008022 289
160 3300027361 Ga0209489_100027 Ga0209489_100027129 289
161 3300027363 Ga0209700_100022 Ga0209700_100022162 289
162 3300028379 Ga0268266_10176661 Ga0268266_101766613 289
163 3300028556 Ga0265337_1003078 Ga0265337_10030783 289
164 3300028573 Ga0265334_10000940 Ga0265334_100009409 289
165 3300028800 Ga0265338_10003861 Ga0265338_100038616 289
166 3300031595 Ga0265313_10008702 Ga0265313_100087026 289
167 3300035695 Ga0373927_0000177 Ga0373927_0000177_45110_45982 289
168 3300037068 Ga0373925_0000912 Ga0373925_0000912_17539_18411 289
169 3300038443 Ga0395901_0119217 Ga0395901_0119217_801_1670 289
170 3300041413 Ga0439465_0027941 Ga0439465_0027941_40_909 289
171 3300044683 Ga0466965_0005988 Ga0466965_0005988_2421_3290 289
172 3300044694 Ga0466963_0005557 Ga0466963_0005557_5415_6287 289
173 3300044765 Ga0466970_0000134 Ga0466970_0000134_4626_5498 289
174 3300044901 Ga0466960_0068097 Ga0466960_0068097_514_1383 289
175 3300046459 Ga0495629_0077435 Ga0495629_0077435_331_1206 289
176 3300046472 Ga0495580_0046525 Ga0495580_0046525_1985_2860 289
177 3300046476 Ga0495662_0061767 Ga0495662_0061767_291_1163 289
178 3300046535 Ga0495586_0041189 Ga0495586_0041189_91_966 289
179 3300046642 Ga0495634_0103523 Ga0495634_0103523_831_1706 289
180 3300047319 Ga0495674_0277364 Ga0495674_0277364_74_949 289
181 3300047472 Ga0495686_0021447 Ga0495686_0021447_2031_2912 289
182 3300049568 Ga0501031_0108085 Ga0501031_0108085_86_967 289
183 3300049579 Ga0501043_0037747 Ga0501043_0037747_1997_2878 289
184 3300049586 Ga0501070_0090766 Ga0501070_0090766_576_1457 289
185 3300049822 Ga0501035_0001605 Ga0501035_0001605_9528_10409 289
186 3300049823 Ga0501044_0199978 Ga0501044_0199978_882_1763 289
187 3300050492 nmdc:mga0yw44_191151_c1 nmdc:mga0yw44_191151_c1_423_1292 289
188 iso_pu_bacteria 2842038055 2842040906 289
189 iso_pu_bacteria 2842045827 2842046149 289
190 iso_pu_bacteria 2847930680 2847938316 289
191 iso_pu_bacteria 2879083081 2879086098 289
192 iso_pu_bacteria 2906643746 2906648863 289

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01557

FAA_hydrolase

Fumarylacetoacetate (FAA) hydrolase family

108

316

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
1i7o-assembly4.cif.gz_D crystal structure of hpce 0.9422 77 287
1wzo-assembly1.cif.gz_A crystal structure of the hpce from thermus thermophilus hb8 0.9262 4 288
1wzo-assembly1.cif.gz_A crystal structure of the hpce from thermus thermophilus hb8 0.9187 4 288
6sbj-assembly2.cif.gz_C x-ray structure of mus musculus fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) apo-form uuncomplexed 0.916 74 287
6foh-assembly1.cif.gz_A x-ray structure of homo sapiens fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) at 1.56a resolution. 0.9115 74 287
ID Description Score Start End Superfamily
3r6oA02 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9386 72 288 3.90.850.10
6jvvA02 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.938 72 287 3.90.850.10
af_Q9VU50_128_337_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.937 74 288 3.90.850.10
6jvvA02 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9332 72 287 3.90.850.10
af_A0A0R4IWE1_56_289_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.933 52 285 3.90.850.10
ID Description Score Start End GO Terms
AF-A0A3D0REZ2-F1-model_v4 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 0.9964 109 287 GO:0016853
GO:0046872
AF-A0A526PWW0-F1-model_v4 Fumarylacetoacetate hydrolase family protein 0.9937 195 288 GO:0016787
GO:0046872
AF-A0A3D0REZ2-F1-model_v4 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 0.9908 109 287 GO:0016853
GO:0046872
AF-W4VH25-F1-model_v4 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase 0.9755 103 287 GO:0003824
GO:0044281
AF-A0A645EDS8-F1-model_v4 Fumarylacetoacetase-like C-terminal domain-containing protein 0.9716 103 285 GO:0018773
GO:0046872

Feature Viewer

pLDDT pTM Quality
92.78 0.92 High
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Predicted Structure (AlphaFold2)

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