F296395

General Info

Members Datasets Scaffolds Average Seq Length
192 151 384 260

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221714|2644627039
Length 298
Sequence SSERSGRDLRLLRAAVFAAVCVVLAAVGHTAASCAAVPLWTLGVGFLAVLAVAAPLAGRTRSLPGIAALLAVGQTVLHALFGLGQHTASVSAAASTSVSRSVSSASASAALSASDASLVERAARLVCGATAAPISPAQAQKMLVDARLYSPGTGGGGTGGAGMSGMSGMTGMSSMQHPGDALATTGSAMSLLPSLPMLLGHVLAAVAAGWLLRRGDTALLRLLALSAHGVAEGALVRSLRGALALVRALLAGLPTTPGTGVRVPRTALLTPESPRAIALQHSVVRRGPPDVPVLVLAA

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
6 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
7 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
8 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
9 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
10 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
11 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
12 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
13 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
14 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
15 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
16 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
17 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
18 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
19 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
20 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
21 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
22 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
23 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
24 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
25 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
26 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
27 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
28 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
29 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
30 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
31 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
32 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
33 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
34 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
35 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
36 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
37 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
38 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
39 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
40 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
41 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
42 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
43 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
44 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
45 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
46 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
47 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
48 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
49 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
50 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
51 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
52 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
53 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
54 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
55 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
56 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
57 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
58 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
59 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
60 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
61 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
62 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
63 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
64 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
65 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
66 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
67 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
68 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
69 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
70 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
71 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
72 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
73 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
74 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
75 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
76 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
77 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
78 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
79 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
80 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
81 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
82 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
83 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
94 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
96 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
97 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
98 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
99 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
100 2643221714 Streptomyces sp. Root264 Isolate Unclassified
101 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
102 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
103 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
104 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
105 2643221647 Streptomyces sp. Root369 Isolate Unclassified
106 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
107 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
108 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
109 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
110 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
111 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
112 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
113 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
114 2808606448 Streptomyces sp. 193411 Isolate Unclassified
115 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
116 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
117 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
118 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
119 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
120 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
121 2862574272 Streptomyces sp. AcE210 Isolate Nodule
122 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
123 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
124 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
125 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
126 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
127 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
128 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
129 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
130 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
131 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
132 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
133 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
134 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
135 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
136 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
137 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
138 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
139 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
140 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
141 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
142 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
143 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
144 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
145 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
146 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
147 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
148 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
149 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
150 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
151 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.88
Metatranscriptomes 1.04
Isolates 27.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.6
Nodule 1.56
Rhizoplane 0.52
Rhizosphere 72.92
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10005635 3300003316 Bacteria 2593
2 rootL2_10052478 3300003322 Bacteria 6290
3 rootL2_10075769 3300003322 Bacteria 3114
4 rootH1_10019622 3300003323 Bacteria 11458
5 rootH1_10019623 3300003323 Bacteria 3465
6 Ga0006562J51391_1134460 3300003578 Bacteria 3480
7 Ga0006562J51391_1134461 3300003578 Bacteria 2660
8 Ga0070672_100219332 3300005543 Bacteria 1595
9 Ga0209758_1001599 3300025297 Bacteria 25885
10 Ga0207426_1027157 3300025302 Bacteria 1910
11 Ga0307517_10015116 3300028786 Bacteria 10284
12 Ga0307517_10232293 3300028786 Bacteria 1105
13 Ga0307515_10006981 3300028794 Bacteria 22422
14 Ga0307511_10000978 3300030521 Bacteria 30359
15 Ga0307512_10011939 3300030522 Bacteria 8211
16 Ga0307509_10013264 3300031507 Bacteria 9771
17 Ga0307509_10017538 3300031507 Bacteria 8234
18 Ga0307509_10138261 3300031507 Bacteria 2377
19 Ga0307508_10003616 3300031616 Bacteria 15522
20 Ga0307508_10004885 3300031616 Bacteria 12897
21 Ga0307516_10134742 3300031730 Bacteria 2246
22 Ga0307516_10161142 3300031730 Bacteria 1993
23 Ga0307516_10232211 3300031730 Bacteria 1548
24 Ga0307518_10148067 3300031838 Bacteria 1627
25 Ga0307507_10112745 3300033179 Bacteria 2213
26 Ga0307507_10116344 3300033179 Bacteria 2160
27 Ga0307510_10153015 3300033180 Bacteria 1920
28 Ga0395900_0123719 3300037418 Bacteria 2653
29 Ga0395898_0035639 3300037466 Bacteria 4945
30 Ga0395898_0321217 3300037466 Bacteria 1477
31 Ga0439436_0000419 3300041404 Bacteria 10697
32 Ga0439439_0001907 3300041406 Bacteria 4309
33 Ga0439439_0002315 3300041406 Bacteria 4027
34 Ga0439433_0000368 3300041999 Bacteria 7993
35 Ga0439433_0021982 3300041999 Bacteria 1428
36 Ga0439448_0002548 3300042005 Bacteria 4966
37 Ga0439449_0003310 3300042007 Bacteria 6288
38 Ga0439449_0034052 3300042007 Bacteria 1897
39 Ga0439457_000361 3300042014 Bacteria 12696
40 Ga0450896_000912 3300042133 Bacteria 3407
41 Ga0450898_028808 3300042134 Bacteria 1010
42 Ga0450903_000389 3300042138 Bacteria 9499
43 Ga0450906_003794 3300042145 Bacteria 3214
44 Ga0439458_0011562 3300042157 Bacteria 1976
45 Ga0450908_014382 3300042184 Bacteria 1424
46 Ga0466969_0004111 3300044656 Bacteria 7724
47 Ga0466969_0016987 3300044656 Bacteria 3802
48 Ga0466972_0004269 3300044658 Bacteria 7139
49 Ga0466965_0009578 3300044683 Bacteria 4503
50 Ga0466966_0014516 3300044684 Bacteria 5213
51 Ga0466961_0004453 3300044693 Bacteria 8774
52 Ga0466961_0101067 3300044693 Bacteria 1816
53 Ga0466963_0005879 3300044694 Bacteria 7231
54 Ga0466964_0003083 3300044706 Bacteria 6059
55 Ga0466971_0001873 3300044719 Bacteria 8940
56 Ga0466971_0027013 3300044719 Bacteria 2569
57 Ga0466971_0144734 3300044719 Bacteria 1108
58 Ga0466959_0042936 3300045049 Bacteria 3334
59 Ga0466959_0046275 3300045049 Bacteria 3202
60 Ga0466967_0000653 3300045976 Bacteria 17417
61 Ga0466967_0013524 3300045976 Bacteria 6311
62 Ga0466967_0101307 3300045976 Bacteria 2632
63 Ga0466967_0204256 3300045976 Bacteria 1872
64 Ga0495603_0014607 3300046455 Bacteria 4747
65 Ga0495629_0007326 3300046459 Bacteria 8133
66 Ga0495629_0033266 3300046459 Bacteria 3647
67 Ga0495629_0060446 3300046459 Bacteria 2648
68 Ga0495638_0054212 3300046460 Bacteria 2493
69 Ga0495638_0067941 3300046460 Bacteria 2187
70 Ga0495651_0004723 3300046462 Bacteria 10425
71 Ga0495582_0050610 3300046473 Bacteria 2289
72 Ga0495605_0061757 3300046474 Bacteria 1792
73 Ga0495639_0003339 3300046475 Bacteria 6958
74 Ga0495662_0011821 3300046476 Bacteria 4265
75 Ga0495662_0063775 3300046476 Bacteria 1780
76 Ga0495664_0000329 3300046477 Bacteria 22872
77 Ga0495594_0026060 3300046499 Bacteria 3144
78 Ga0495618_0018090 3300046514 Bacteria 4326
79 Ga0495620_0067460 3300046515 Bacteria 1472
80 Ga0495631_0176972 3300046518 Bacteria 914
81 Ga0495644_0055543 3300046523 Bacteria 1488
82 Ga0495652_0034803 3300046529 Bacteria 4389
83 Ga0495640_0025330 3300046533 Bacteria 4305
84 Ga0495587_0006390 3300046536 Bacteria 7686
85 Ga0495609_0078697 3300046538 Bacteria 1443
86 Ga0495645_0004878 3300046543 Bacteria 9172
87 Ga0495622_0029545 3300046557 Bacteria 2561
88 Ga0495634_0001870 3300046642 Bacteria 18115
89 Ga0495611_0075531 3300046648 Bacteria 1544
90 Ga0495625_0007588 3300046660 Bacteria 9417
91 Ga0495625_0161970 3300046660 Bacteria 1498
92 Ga0495635_0012295 3300046663 Bacteria 5996
93 Ga0495588_0021876 3300046674 Bacteria 3156
94 Ga0495623_0035504 3300046679 Bacteria 3195
95 Ga0495646_0002403 3300046680 Bacteria 11487
96 Ga0495613_0001840 3300046689 Bacteria 16144
97 Ga0495671_0005760 3300046692 Bacteria 7221
98 Ga0495649_0079039 3300046694 Bacteria 1760
99 Ga0495589_0028803 3300046794 Bacteria 2801
100 Ga0495589_0048417 3300046794 Bacteria 2104
101 Ga0495600_0005132 3300046809 Bacteria 7872
102 Ga0495581_0005322 3300047315 Bacteria 7442
103 Ga0495604_0000676 3300047317 Bacteria 28890
104 Ga0495676_0100309 3300047321 Bacteria 2143
105 Ga0495687_002290 3300047443 Bacteria 15657
106 Ga0495687_018379 3300047443 Bacteria 3456
107 Ga0495685_019124 3300047447 Bacteria 2352
108 Ga0495685_023171 3300047447 Bacteria 2136
109 Ga0495681_0009999 3300047470 Bacteria 5780
110 Ga0495686_0115647 3300047472 Bacteria 1604
111 Ga0495593_0006229 3300047673 Bacteria 7009
112 Ga0495602_0158585 3300048088 Bacteria 1769
113 Ga0495614_0029756 3300048089 Bacteria 2349
114 Ga0495614_0067861 3300048089 Bacteria 1535
115 Ga0501032_0065594 3300049569 Bacteria 2428
116 Ga0501032_0150445 3300049569 Bacteria 1531
117 Ga0501033_0001714 3300049570 Bacteria 19196
118 Ga0501034_0001636 3300049571 Bacteria 28989
119 Ga0501034_0295833 3300049571 Bacteria 1556
120 Ga0501036_0000201 3300049572 Bacteria 39731
121 Ga0501036_0049884 3300049572 Bacteria 3545
122 Ga0501038_0011424 3300049574 Bacteria 8103
123 Ga0501038_0048699 3300049574 Bacteria 3666
124 Ga0501039_0016638 3300049575 Bacteria 5634
125 Ga0501043_0004756 3300049579 Bacteria 11012
126 Ga0501047_0110004 3300049581 Bacteria 2638
127 Ga0501070_0000725 3300049586 Bacteria 30116
128 Ga0501074_0003177 3300049590 Bacteria 11590
129 Ga0501035_0000428 3300049822 Bacteria 47356
130 Ga0501044_0000680 3300049823 Bacteria 41151
131 Ga0501044_0003747 3300049823 Bacteria 17081
132 Ga0501044_0135011 3300049823 Bacteria 2459
133 Ga0501044_0200228 3300049823 Bacteria 1955
134 Ga0501044_0380849 3300049823 Bacteria 1326
135 Ga0500583_0078460 3300053092 Bacteria 1592
136 Ga0500640_043180 3300053095 Bacteria 1979
137 Ga0500560_024066 3300053107 Bacteria 1773
138 Ga0466962_0005884 3300061719 Bacteria 5891
139 Ga0466962_0037810 3300061719 Bacteria 2312
140 Ga0466962_0104425 3300061719 Bacteria 1361
141 2644627039 2643221714 Bacteria 9015452
142 2547406038 2547132111 Bacteria 8013147
143 2554257568 2554235005 Bacteria 6457341
144 2585310810 2582581313 Bacteria 10042643
145 2585314498 2582581314 Bacteria 11452267
146 2644262929 2643221647 Bacteria 10741251
147 2644443140 2643221678 Bacteria 9540101
148 2784588981 2784132148 Bacteria 8627943
149 2785342871 2784746763 Bacteria 9783172
150 2785369931 2784746768 Bacteria 10036182
151 2786671003 2786546132 Bacteria 10419719
152 2793976074 2791355406 Bacteria 11364898
153 2808842420 2808606359 Bacteria 9866990
154 2808920937 2808606375 Bacteria 9466072
155 2809232582 2808606448 Bacteria 8656184
156 2812357672 2811994879 Bacteria 9313447
157 2812480191 2811994917 Bacteria 7761064
158 2852637249 2852635781 Bacteria 8251373
159 2862286028 2862281513 Bacteria 9621493
160 2862384433 2862382967 Bacteria 10317375
161 2862508087 2862507626 Bacteria 9425308
162 2862578887 2862574272 Bacteria 10567477
163 2863404172 2863404153 Bacteria 9672205
164 2877680698 2877676314 Bacteria 9512378
165 2912731380 2912723979 Bacteria 8557534
166 2919471915 2919468124 Bacteria 9133025
167 2946068184 2946064051 Bacteria 8957905
168 2946076299 2946072368 Bacteria 8999607
169 2947228738 2947224130 Bacteria 9938529
170 2954006774 2954002825 Bacteria 9173742
171 2954677330 2954673503 Bacteria 9685905
172 2954686822 2954682443 Bacteria 9862841
173 2954715826 2954711539 Bacteria 10867210
174 2954725764 2954721474 Bacteria 10456478
175 2954736036 2954731030 Bacteria 10243860
176 2954744722 2954740390 Bacteria 10229294
177 2954754897 2954749733 Bacteria 10366972
178 2954763684 2954759201 Bacteria 9358192
179 3006396870 3006393351 Bacteria 6615579
180 3006490232 3006486233 Bacteria 8157040
181 3006499360 3006493962 Bacteria 8825450
182 8008566865 8008558824 Bacteria 10610750
183 8008578552 8008574985 Bacteria 7815457
184 8023630468 8023623736 Bacteria 8593882
185 8047897640 8047893842 Bacteria 11723082
186 8048129677 8048127548 Bacteria 11053136
187 8048361230 8048356638 Bacteria 11044339
188 8048374627 8048369669 Bacteria 11666822
189 8048383595 8048379754 Bacteria 11877923
190 8048412931 8048406513 Bacteria 8936924
191 8056667398 8056667051 Bacteria 6953971
192 8056833311 8056829672 Bacteria 9045328
193 rootH1_10005635
194 rootL2_10052478
195 rootL2_10075769
196 rootH1_10019622
197 rootH1_10019623
198 Ga0006562J51391_1134460
199 Ga0006562J51391_1134461
200 Ga0070672_100219332
201 Ga0209758_1001599
202 Ga0207426_1027157
203 Ga0307517_10015116
204 Ga0307517_10232293
205 Ga0307515_10006981
206 Ga0307511_10000978
207 Ga0307512_10011939
208 Ga0307509_10013264
209 Ga0307509_10017538
210 Ga0307509_10138261
211 Ga0307508_10003616
212 Ga0307508_10004885
213 Ga0307516_10134742
214 Ga0307516_10161142
215 Ga0307516_10232211
216 Ga0307518_10148067
217 Ga0307507_10112745
218 Ga0307507_10116344
219 Ga0307510_10153015
220 Ga0395900_0123719
221 Ga0395898_0035639
222 Ga0395898_0321217
223 Ga0439436_0000419
224 Ga0439439_0001907
225 Ga0439439_0002315
226 Ga0439433_0000368
227 Ga0439433_0021982
228 Ga0439448_0002548
229 Ga0439449_0003310
230 Ga0439449_0034052
231 Ga0439457_000361
232 Ga0450896_000912
233 Ga0450898_028808
234 Ga0450903_000389
235 Ga0450906_003794
236 Ga0439458_0011562
237 Ga0450908_014382
238 Ga0466969_0004111
239 Ga0466969_0016987
240 Ga0466972_0004269
241 Ga0466965_0009578
242 Ga0466966_0014516
243 Ga0466961_0004453
244 Ga0466961_0101067
245 Ga0466963_0005879
246 Ga0466964_0003083
247 Ga0466971_0001873
248 Ga0466971_0027013
249 Ga0466971_0144734
250 Ga0466959_0042936
251 Ga0466959_0046275
252 Ga0466967_0000653
253 Ga0466967_0013524
254 Ga0466967_0101307
255 Ga0466967_0204256
256 Ga0495603_0014607
257 Ga0495629_0007326
258 Ga0495629_0033266
259 Ga0495629_0060446
260 Ga0495638_0054212
261 Ga0495638_0067941
262 Ga0495651_0004723
263 Ga0495582_0050610
264 Ga0495605_0061757
265 Ga0495639_0003339
266 Ga0495662_0011821
267 Ga0495662_0063775
268 Ga0495664_0000329
269 Ga0495594_0026060
270 Ga0495618_0018090
271 Ga0495620_0067460
272 Ga0495631_0176972
273 Ga0495644_0055543
274 Ga0495652_0034803
275 Ga0495640_0025330
276 Ga0495587_0006390
277 Ga0495609_0078697
278 Ga0495645_0004878
279 Ga0495622_0029545
280 Ga0495634_0001870
281 Ga0495611_0075531
282 Ga0495625_0007588
283 Ga0495625_0161970
284 Ga0495635_0012295
285 Ga0495588_0021876
286 Ga0495623_0035504
287 Ga0495646_0002403
288 Ga0495613_0001840
289 Ga0495671_0005760
290 Ga0495649_0079039
291 Ga0495589_0028803
292 Ga0495589_0048417
293 Ga0495600_0005132
294 Ga0495581_0005322
295 Ga0495604_0000676
296 Ga0495676_0100309
297 Ga0495687_002290
298 Ga0495687_018379
299 Ga0495685_019124
300 Ga0495685_023171
301 Ga0495681_0009999
302 Ga0495686_0115647
303 Ga0495593_0006229
304 Ga0495602_0158585
305 Ga0495614_0029756
306 Ga0495614_0067861
307 Ga0501032_0065594
308 Ga0501032_0150445
309 Ga0501033_0001714
310 Ga0501034_0001636
311 Ga0501034_0295833
312 Ga0501036_0000201
313 Ga0501036_0049884
314 Ga0501038_0011424
315 Ga0501038_0048699
316 Ga0501039_0016638
317 Ga0501043_0004756
318 Ga0501047_0110004
319 Ga0501070_0000725
320 Ga0501074_0003177
321 Ga0501035_0000428
322 Ga0501044_0000680
323 Ga0501044_0003747
324 Ga0501044_0135011
325 Ga0501044_0200228
326 Ga0501044_0380849
327 Ga0500583_0078460
328 Ga0500640_043180
329 Ga0500560_024066
330 Ga0466962_0005884
331 Ga0466962_0037810
332 Ga0466962_0104425
333 2644627039
334 2547406038
335 2554257568
336 2585310810
337 2585314498
338 2644262929
339 2644443140
340 2784588981
341 2785342871
342 2785369931
343 2786671003
344 2793976074
345 2808842420
346 2808920937
347 2809232582
348 2812357672
349 2812480191
350 2852637249
351 2862286028
352 2862384433
353 2862508087
354 2862578887
355 2863404172
356 2877680698
357 2912731380
358 2919471915
359 2946068184
360 2946076299
361 2947228738
362 2954006774
363 2954677330
364 2954686822
365 2954715826
366 2954725764
367 2954736036
368 2954744722
369 2954754897
370 2954763684
371 3006396870
372 3006490232
373 3006499360
374 8008566865
375 8008578552
376 8023630468
377 8047897640
378 8048129677
379 8048361230
380 8048374627
381 8048383595
382 8048412931
383 8056667398
384 8056833311

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
7sqc-assembly1.cif.gz_1X ciliary c1 central pair apparatus isolated from chlamydomonas reinhardtii 0.2666 8 191
4yf1-assembly1.cif.gz_C 1.85 angstrom crystal structure of lmo0812 from listeria monocytogenes egd-e 0.2609 10 131
6vej-assembly1.cif.gz_C triabc transporter from pseudomonas aeruginosa 0.253 8 164
4nqi-assembly2.cif.gz_D structure of the n-terminal i-bar domain (1-259) of d.discoideum ibara 0.2394 8 198
4yf1-assembly1.cif.gz_C 1.85 angstrom crystal structure of lmo0812 from listeria monocytogenes egd-e 0.2248 10 131
ID Description Score Start End Superfamily
af_A0A1D6JQC7_1_214_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.3138 1 198 1.20.140.150
af_Q59MV6_18_161_1.10.490.10 Mainly Alpha;Orthogonal Bundle;Globin-like;Globins 0.3073 71 171 1.10.490.10
af_E7FEP5_85_395_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.2886 7 198 1.10.287.70
af_A0A0B4JCU2_1_137_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.2879 8 131 1.20.140.150
af_Q966F9_64_291_1.10.287.70 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.2785 8 191 1.10.287.70
ID Description Score Start End GO Terms
AF-A0A850CDQ5-F1-model_v4 Uncharacterized protein 0.7681 10 190 GO:0016020
AF-A0A850CDQ5-F1-model_v4 Uncharacterized protein 0.7339 10 190 GO:0016020
AF-A0A6G3TMF4-F1-model_v4 Integral membrane protein 0.7273 1 192 GO:0016020
AF-A0A6B2UCA4-F1-model_v4 Integral membrane protein 0.7201 1 199 GO:0016020
AF-A0A7X0IAP3-F1-model_v4 MFS transporter 0.7161 1 226 GO:0016020

Map