F295293

General Info

Members Datasets Scaffolds Average Seq Length
192 93 384 127

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100084294|Ga0070698_1000842942
Length 129
Sequence LSVSILVVDDEPDVAELFRQRFRREARQGAYVLHFYYSAEGALAKPDDRIRPELIRILSDINMPGMDGLALLREIKRRWPDLPVMMVTGGDERRRSADEYGAAEFITKPVDFNLLKEQLRQLPSGARPQ

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
23 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
29 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
32 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
33 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
34 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
51 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
52 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
53 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
54 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
55 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
56 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
57 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
58 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
59 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
60 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
61 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
65 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
66 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
67 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
68 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
69 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
70 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
73 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
74 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
75 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
76 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
77 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
78 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
79 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
80 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
81 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
82 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
83 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
84 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
85 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
86 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
87 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
88 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
89 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
90 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
91 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
92 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
93 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.56
Rhizosphere 90.1
Stem 0
Stem Tuber 0
Unclassified 9.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100084294 3300005471 Bacteria 3166
2 Ga0068868_101031238 3300005338 Bacteria 754
3 Ga0070675_101703053 3300005354 Bacteria 582
4 Ga0070671_100099937 3300005355 Bacteria 2434
5 Ga0070709_10037364 3300005434 Bacteria 2965
6 Ga0070709_10759441 3300005434 Bacteria 758
7 Ga0070714_100500730 3300005435 Bacteria 1158
8 Ga0070714_100821905 3300005435 Bacteria 900
9 Ga0070713_100191443 3300005436 Bacteria 1843
10 Ga0070710_10111230 3300005437 Bacteria 1646
11 Ga0070710_10174582 3300005437 Bacteria 1341
12 Ga0070711_100065195 3300005439 Bacteria 2547
13 Ga0070711_100221688 3300005439 Bacteria 1470
14 Ga0070694_100772323 3300005444 Bacteria 786
15 Ga0070708_100072955 3300005445 Bacteria 3093
16 Ga0070708_100279412 3300005445 Bacteria 1571
17 Ga0070708_102105106 3300005445 Bacteria 522
18 Ga0070678_102001782 3300005456 Bacteria 548
19 Ga0070706_100047776 3300005467 Bacteria 3950
20 Ga0070706_100449839 3300005467 Bacteria 1199
21 Ga0070706_100590290 3300005467 Unclassified 1032
22 Ga0070706_101092162 3300005467 Bacteria 734
23 Ga0070707_100014595 3300005468 Bacteria 7366
24 Ga0070707_100018275 3300005468 Bacteria 6597
25 Ga0070707_100193979 3300005468 Bacteria 1980
26 Ga0070707_101008783 3300005468 Bacteria 798
27 Ga0070698_100477473 3300005471 Bacteria 1183
28 Ga0070699_100110266 3300005518 Bacteria 2415
29 Ga0070699_101311979 3300005518 Bacteria 664
30 Ga0070697_100115668 3300005536 Bacteria 2240
31 Ga0068855_100322663 3300005563 Bacteria 1707
32 Ga0068856_100065461 3300005614 Bacteria 3592
33 Ga0068856_101608710 3300005614 Bacteria 663
34 Ga0068859_101096811 3300005617 Bacteria 875
35 Ga0068864_101651736 3300005618 Bacteria 645
36 Ga0070717_10721554 3300006028 Bacteria 906
37 Ga0070717_12038809 3300006028 Bacteria 517
38 Ga0070712_100015810 3300006175 Bacteria 4866
39 Ga0070712_100186663 3300006175 Bacteria 1619
40 Ga0070712_100482523 3300006175 Unclassified 1037
41 Ga0070712_101054396 3300006175 Bacteria 705
42 Ga0097621_101399328 3300006237 Bacteria 662
43 Ga0075436_101045734 3300006914 Unclassified 614
44 Ga0097620_101096843 3300006931 Bacteria 875
45 Ga0111539_12238474 3300009094 Bacteria 634
46 Ga0105248_11932182 3300009177 Bacteria 670
47 Ga0157374_12135025 3300013296 Bacteria 587
48 Ga0163162_10338365 3300013306 Bacteria 1637
49 Ga0163163_10864785 3300014325 Bacteria 967
50 Ga0182007_10036131 3300015262 Bacteria 1663
51 Ga0213873_10103492 3300021358 Bacteria 821
52 Ga0213873_10126220 3300021358 Bacteria 755
53 Ga0213876_10381469 3300021384 Bacteria 750
54 Ga0213876_10392881 3300021384 Unclassified 738
55 Ga0207692_10131535 3300025898 Bacteria 1414
56 Ga0207692_10738261 3300025898 Bacteria 641
57 Ga0207699_11075369 3300025906 Unclassified 595
58 Ga0207684_10180306 3300025910 Bacteria 1821
59 Ga0207684_10283024 3300025910 Bacteria 1430
60 Ga0207693_10001243 3300025915 Bacteria 22677
61 Ga0207693_10057031 3300025915 Bacteria 3062
62 Ga0207693_10414931 3300025915 Bacteria 1052
63 Ga0207693_10564932 3300025915 Unclassified 887
64 Ga0207663_10092152 3300025916 Bacteria 2014
65 Ga0207663_10105869 3300025916 Bacteria 1899
66 Ga0207663_10840050 3300025916 Bacteria 733
67 Ga0207646_10004166 3300025922 Bacteria 15858
68 Ga0207646_10017994 3300025922 Bacteria 6598
69 Ga0207646_10596960 3300025922 Bacteria 991
70 Ga0207659_10553490 3300025926 Bacteria 978
71 Ga0207700_10096638 3300025928 Bacteria 2346
72 Ga0207700_10597335 3300025928 Bacteria 982
73 Ga0207664_10070018 3300025929 Bacteria 2822
74 Ga0207664_10272469 3300025929 Bacteria 1483
75 Ga0207664_10761177 3300025929 Bacteria 871
76 Ga0207664_10993191 3300025929 Bacteria 752
77 Ga0207644_10282284 3300025931 Bacteria 1333
78 Ga0207665_10157948 3300025939 Bacteria 1629
79 Ga0207661_10279130 3300025944 Unclassified 1493
80 Ga0207667_10919224 3300025949 Bacteria 866
81 Ga0207677_10698019 3300026023 Bacteria 900
82 Ga0207702_10024520 3300026078 Bacteria 5005
83 Ga0207683_11418778 3300026121 Bacteria 642
84 Ga0373934_0018046 3300035086 Bacteria 2698
85 Ga0373934_0071588 3300035086 Bacteria 1387
86 Ga0373934_0268262 3300035086 Bacteria 706
87 Ga0373934_0471718 3300035086 Unclassified 527
88 Ga0373951_0112023 3300035091 Bacteria 735
89 Ga0373923_0354061 3300035111 Unclassified 701
90 Ga0373953_0055386 3300035117 Bacteria 1610
91 Ga0373953_0118719 3300035117 Bacteria 1122
92 Ga0373954_0070876 3300035118 Bacteria 1656
93 Ga0373954_0209237 3300035118 Bacteria 958
94 Ga0373954_0365687 3300035118 Bacteria 713
95 Ga0373956_0047540 3300035119 Bacteria 1920
96 Ga0373956_0527902 3300035119 Bacteria 563
97 Ga0373957_0365866 3300035120 Bacteria 617
98 Ga0373943_0708587 3300035170 Bacteria 597
99 Ga0373943_0900132 3300035170 Bacteria 529
100 Ga0373955_0127558 3300035172 Bacteria 1483
101 Ga0373955_0192626 3300035172 Bacteria 1212
102 Ga0373955_0807031 3300035172 Bacteria 577
103 Ga0373935_0977506 3300035692 Bacteria 628
104 Ga0373935_1415408 3300035692 Bacteria 520
105 Ga0373933_0087154 3300035724 Bacteria 1922
106 Ga0373933_0108060 3300035724 Bacteria 1732
107 Ga0373933_0673220 3300035724 Bacteria 680
108 Ga0373933_0875654 3300035724 Bacteria 591
109 Ga0373947_0163385 3300035725 Bacteria 1441
110 Ga0373947_0304090 3300035725 Bacteria 1064
111 Ga0373937_0015515 3300036401 Bacteria 6739
112 Ga0373937_0031641 3300036401 Bacteria 4795
113 Ga0373937_0208895 3300036401 Bacteria 1836
114 Ga0373937_0285320 3300036401 Bacteria 1559
115 Ga0373937_0293736 3300036401 Bacteria 1535
116 Ga0373937_0377412 3300036401 Bacteria 1344
117 Ga0373937_0475026 3300036401 Bacteria 1187
118 Ga0373937_1092315 3300036401 Bacteria 746
119 Ga0373925_0044896 3300037068 Unclassified 3282
120 Ga0373925_1174970 3300037068 Bacteria 631
121 Ga0373925_1492877 3300037068 Unclassified 553
122 Ga0436364_0946594 3300037853 Bacteria 1210
123 Ga0436364_0985960 3300037853 Bacteria 1221
124 Ga0436364_1214393 3300037853 Bacteria 678
125 Ga0436365_0932625 3300039437 Bacteria 1450
126 Ga0436365_1607350 3300039437 Bacteria 752
127 Ga0436365_1791262 3300039437 Unclassified 1010
128 Ga0436360_0168829 3300039438 Bacteria 782
129 Ga0436360_0405769 3300039438 Bacteria 1716
130 Ga0436360_0469296 3300039438 Bacteria 596
131 Ga0436360_0514174 3300039438 Bacteria 2671
132 Ga0436360_0656859 3300039438 Bacteria 666
133 Ga0436360_1022007 3300039438 Bacteria 1403
134 Ga0436361_0979222 3300039447 Bacteria 804
135 Ga0436361_1184883 3300039447 Unclassified 695
136 Ga0436363_0050826 3300039450 Bacteria 942
137 Ga0436363_0235318 3300039450 Bacteria 1652
138 Ga0436363_0369800 3300039450 Bacteria 1424
139 Ga0436363_0878927 3300039450 Bacteria 735
140 Ga0436363_0933543 3300039450 Bacteria 1040
141 Ga0436363_1157439 3300039450 Bacteria 1482
142 Ga0436363_1286019 3300039450 Bacteria 539
143 Ga0436363_1504145 3300039450 Bacteria 1074
144 Ga0436362_0310321 3300039453 Bacteria 836
145 Ga0436362_0350299 3300039453 Bacteria 545
146 Ga0436362_0411756 3300039453 Bacteria 616
147 Ga0436362_0431586 3300039453 Bacteria 776
148 Ga0436362_0717262 3300039453 Bacteria 868
149 Ga0436362_0832003 3300039453 Unclassified 564
150 Ga0436362_0987800 3300039453 Bacteria 650
151 Ga0436362_1215871 3300039453 Unclassified 889
152 Ga0466958_1063214 3300045836 Bacteria 528
153 Ga0466967_0281104 3300045976 Bacteria 1597
154 Ga0495592_0614194 3300046454 Bacteria 662
155 Ga0495629_0405937 3300046459 Bacteria 926
156 Ga0495629_0780314 3300046459 Bacteria 631
157 Ga0495651_0718220 3300046462 Bacteria 622
158 Ga0495653_0237083 3300046463 Bacteria 1218
159 Ga0495608_0290194 3300046511 Bacteria 1014
160 Ga0495628_0558029 3300046516 Bacteria 822
161 Ga0495628_0974077 3300046516 Bacteria 585
162 Ga0495645_0210088 3300046543 Bacteria 1315
163 Ga0495645_0547454 3300046543 Bacteria 718
164 Ga0495667_0043312 3300046559 Bacteria 2983
165 Ga0495667_0558767 3300046559 Bacteria 715
166 Ga0495635_0756579 3300046663 Bacteria 628
167 Ga0495604_0267033 3300047317 Unclassified 1161
168 Ga0495680_0082722 3300047322 Bacteria 2422
169 Ga0495675_0823014 3300047444 Bacteria 513
170 Ga0495684_0089777 3300047471 Bacteria 2328
171 Ga0495602_0226594 3300048088 Unclassified 1407
172 Ga0495602_0288010 3300048088 Bacteria 1207
173 Ga0495602_1030713 3300048088 Bacteria 542
174 Ga0496104_0738919 3300048907 Bacteria 891
175 Ga0496108_0250969 3300048911 Bacteria 1539
176 Ga0496109_1447048 3300048912 Bacteria 622
177 nmdc:mga08y16_1192509_c1 3300050511 Bacteria 732
178 nmdc:mga0rr50_351751_c1 3300050513 Unclassified 1239
179 nmdc:mga0rr50_990646_c1 3300050513 Bacteria 716
180 Ga0495601_0133800 3300053077 Bacteria 1616
181 Ga0495601_0269274 3300053077 Bacteria 1111
182 Ga0495601_0538258 3300053077 Bacteria 752
183 Ga0495601_0825340 3300053077 Bacteria 588
184 Ga0495601_0909956 3300053077 Bacteria 555
185 Ga0495601_0970673 3300053077 Bacteria 535
186 Ga0495595_0255008 3300053084 Bacteria 879
187 Ga0495595_0411090 3300053084 Bacteria 686
188 Ga0495595_0504633 3300053084 Bacteria 616
189 Ga0495595_0587775 3300053084 Bacteria 569
190 Ga0495619_0012121 3300053085 Bacteria 5430
191 Ga0495619_0023048 3300053085 Bacteria 3988
192 Ga0495619_0196263 3300053085 Unclassified 1397
193 Ga0070698_100084294
194 Ga0068868_101031238
195 Ga0070675_101703053
196 Ga0070671_100099937
197 Ga0070709_10037364
198 Ga0070709_10759441
199 Ga0070714_100500730
200 Ga0070714_100821905
201 Ga0070713_100191443
202 Ga0070710_10111230
203 Ga0070710_10174582
204 Ga0070711_100065195
205 Ga0070711_100221688
206 Ga0070694_100772323
207 Ga0070708_100072955
208 Ga0070708_100279412
209 Ga0070708_102105106
210 Ga0070678_102001782
211 Ga0070706_100047776
212 Ga0070706_100449839
213 Ga0070706_100590290
214 Ga0070706_101092162
215 Ga0070707_100014595
216 Ga0070707_100018275
217 Ga0070707_100193979
218 Ga0070707_101008783
219 Ga0070698_100477473
220 Ga0070699_100110266
221 Ga0070699_101311979
222 Ga0070697_100115668
223 Ga0068855_100322663
224 Ga0068856_100065461
225 Ga0068856_101608710
226 Ga0068859_101096811
227 Ga0068864_101651736
228 Ga0070717_10721554
229 Ga0070717_12038809
230 Ga0070712_100015810
231 Ga0070712_100186663
232 Ga0070712_100482523
233 Ga0070712_101054396
234 Ga0097621_101399328
235 Ga0075436_101045734
236 Ga0097620_101096843
237 Ga0111539_12238474
238 Ga0105248_11932182
239 Ga0157374_12135025
240 Ga0163162_10338365
241 Ga0163163_10864785
242 Ga0182007_10036131
243 Ga0213873_10103492
244 Ga0213873_10126220
245 Ga0213876_10381469
246 Ga0213876_10392881
247 Ga0207692_10131535
248 Ga0207692_10738261
249 Ga0207699_11075369
250 Ga0207684_10180306
251 Ga0207684_10283024
252 Ga0207693_10001243
253 Ga0207693_10057031
254 Ga0207693_10414931
255 Ga0207693_10564932
256 Ga0207663_10092152
257 Ga0207663_10105869
258 Ga0207663_10840050
259 Ga0207646_10004166
260 Ga0207646_10017994
261 Ga0207646_10596960
262 Ga0207659_10553490
263 Ga0207700_10096638
264 Ga0207700_10597335
265 Ga0207664_10070018
266 Ga0207664_10272469
267 Ga0207664_10761177
268 Ga0207664_10993191
269 Ga0207644_10282284
270 Ga0207665_10157948
271 Ga0207661_10279130
272 Ga0207667_10919224
273 Ga0207677_10698019
274 Ga0207702_10024520
275 Ga0207683_11418778
276 Ga0373934_0018046
277 Ga0373934_0071588
278 Ga0373934_0268262
279 Ga0373934_0471718
280 Ga0373951_0112023
281 Ga0373923_0354061
282 Ga0373953_0055386
283 Ga0373953_0118719
284 Ga0373954_0070876
285 Ga0373954_0209237
286 Ga0373954_0365687
287 Ga0373956_0047540
288 Ga0373956_0527902
289 Ga0373957_0365866
290 Ga0373943_0708587
291 Ga0373943_0900132
292 Ga0373955_0127558
293 Ga0373955_0192626
294 Ga0373955_0807031
295 Ga0373935_0977506
296 Ga0373935_1415408
297 Ga0373933_0087154
298 Ga0373933_0108060
299 Ga0373933_0673220
300 Ga0373933_0875654
301 Ga0373947_0163385
302 Ga0373947_0304090
303 Ga0373937_0015515
304 Ga0373937_0031641
305 Ga0373937_0208895
306 Ga0373937_0285320
307 Ga0373937_0293736
308 Ga0373937_0377412
309 Ga0373937_0475026
310 Ga0373937_1092315
311 Ga0373925_0044896
312 Ga0373925_1174970
313 Ga0373925_1492877
314 Ga0436364_0946594
315 Ga0436364_0985960
316 Ga0436364_1214393
317 Ga0436365_0932625
318 Ga0436365_1607350
319 Ga0436365_1791262
320 Ga0436360_0168829
321 Ga0436360_0405769
322 Ga0436360_0469296
323 Ga0436360_0514174
324 Ga0436360_0656859
325 Ga0436360_1022007
326 Ga0436361_0979222
327 Ga0436361_1184883
328 Ga0436363_0050826
329 Ga0436363_0235318
330 Ga0436363_0369800
331 Ga0436363_0878927
332 Ga0436363_0933543
333 Ga0436363_1157439
334 Ga0436363_1286019
335 Ga0436363_1504145
336 Ga0436362_0310321
337 Ga0436362_0350299
338 Ga0436362_0411756
339 Ga0436362_0431586
340 Ga0436362_0717262
341 Ga0436362_0832003
342 Ga0436362_0987800
343 Ga0436362_1215871
344 Ga0466958_1063214
345 Ga0466967_0281104
346 Ga0495592_0614194
347 Ga0495629_0405937
348 Ga0495629_0780314
349 Ga0495651_0718220
350 Ga0495653_0237083
351 Ga0495608_0290194
352 Ga0495628_0558029
353 Ga0495628_0974077
354 Ga0495645_0210088
355 Ga0495645_0547454
356 Ga0495667_0043312
357 Ga0495667_0558767
358 Ga0495635_0756579
359 Ga0495604_0267033
360 Ga0495680_0082722
361 Ga0495675_0823014
362 Ga0495684_0089777
363 Ga0495602_0226594
364 Ga0495602_0288010
365 Ga0495602_1030713
366 Ga0496104_0738919
367 Ga0496108_0250969
368 Ga0496109_1447048
369 nmdc:mga08y16_1192509_c1
370 nmdc:mga0rr50_351751_c1
371 nmdc:mga0rr50_990646_c1
372 Ga0495601_0133800
373 Ga0495601_0269274
374 Ga0495601_0538258
375 Ga0495601_0825340
376 Ga0495601_0909956
377 Ga0495601_0970673
378 Ga0495595_0255008
379 Ga0495595_0411090
380 Ga0495595_0504633
381 Ga0495595_0587775
382 Ga0495619_0012121
383 Ga0495619_0023048
384 Ga0495619_0196263

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

5

120

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ifh-assembly1.cif.gz_A unphosphorylated spo0f from paenisporosarcina sp. tg-14 0.9318 3 124
2ftk-assembly2.cif.gz_H berylloflouride spo0f complex with spo0b 0.9315 2 124
7lza-assembly1.cif.gz_A activated form of vanr from s. coelicolor 0.9209 2 124
5ep0-assembly1.cif.gz_A quorum-sensing signal integrator luxo - receiver+catalytic domains 0.9185 2 127
2qzj-assembly5.cif.gz_E crystal structure of a two-component response regulator from clostridium difficile 0.9181 2 129
ID Description Score Start End Superfamily
af_P14375_1_129_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9318 2 124 3.40.50.2300
af_Q2FWH6_1_124_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9258 1 125 3.40.50.2300
1xhfB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9223 1 124 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9184 1 124 3.40.50.2300
3hv2B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.917 1 127 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A7Y2T2K9-F1-model_v4 Response regulator 0.9597 1 124 GO:0000160
GO:0004016
GO:0009190
AF-A3IWG1-F1-model_v4 Two-component response regulator 0.9584 3 124 GO:0000160
GO:0003677
GO:0005737
AF-A0A0H5DRQ3-F1-model_v4 Two-component system, response regulator 0.956 3 124 GO:0000160
GO:0016791
AF-E8R175-F1-model_v4 Response regulator receiver modulated serine phosphatase 0.9547 1 124 GO:0000160
GO:0016791
AF-V5WK43-F1-model_v4 Adenylate cyclase (EC 4.6.1.1) 0.9541 3 124 GO:0000160
GO:0004016
GO:0009190

Map