F295202

General Info

Members Datasets Scaffolds Average Seq Length
192 133 384 692

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100025302|Ga0070714_1000253022
Length 734
Sequence MSAGNGRHTPIRFGLVPVKASRSLTMGGETHRTINPRLLMRVLDQVVVAKPVSAPSAGRSFPIGVTLLPSGANFSVFSRSAAAIELLFFDRLDDARPSRVIPVANHTYHYWHVFVPGVQAGQIYGFRAYGPLEPDRGLRFDPSKILLDPYGRAIVVPKNYSRAAARVKGDNTPIAMKSVVTDPEGYDWEGDTPLKRPWSRTIIYEMHVRGFTIHPSSGLAESKRGTYAGLIEKIPYLQHLGITAVELLPVFQFDPQDAPPGRTNYWGYSPVSFFAPHQAYSSRQQPLGALDEFRDMVKALHRAGIEVILDVVFNHTAEGERDGPTLCFRGLDNPTYYLLCEDRSRYANFTGTGNTLNANHPVVRRMIVDSLRYWVSEMHVDGFRFDLASILARDSSGAVMPNPPVVWDIESDPALAGTKMIAEAWDATGLYQVGSFAGDSWKEWNDRFRDDVRDFFRGSNDSVVRMGDRLLGSPSIYGRREREAEESINFVACHDGFTLNDLVSYNHKHNEELDGRDDNRSWNCGFEGRTDNPEIERLRNRQVKNFFTATILSVGVPMFVMGDEVRRSQRGNNNAYCQDNETSWFDWELLSKHGDVLRFVNLLIERRVMRDVEHERRRITLSQFLREAKRAWHGVKLNQPDWSADSHCLAISAELQNEGLLLYVILNAYWEHLEFELPKVTNATDNWRRWIDTALDSPNEICEWNAAVPVPGKTYCAGARSVVVLIAGEGINGR

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
39 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
40 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
41 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
50 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
61 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
90 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
93 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
94 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
96 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
97 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
98 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
99 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
104 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
105 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
106 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
107 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
110 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
111 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
118 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
119 3300049520 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_B_7_drought Metagenome Rhizosphere
120 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
121 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
122 3300049656 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G3_B_0_drought Metagenome Rhizosphere
123 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
124 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
125 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
126 3300049762 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control Metagenome Rhizosphere
127 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
128 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.04
Rhizosphere 98.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100025302 3300005435 Bacteria 4897
2 rootL2_10247684 3300003322 Bacteria 4082
3 Ga0065715_10003612 3300005293 Bacteria 4288
4 Ga0070676_10008291 3300005328 Bacteria 5597
5 Ga0070690_100016314 3300005330 Bacteria 4447
6 Ga0070689_100000851 3300005340 Bacteria 18972
7 Ga0070689_100007015 3300005340 Bacteria 7847
8 Ga0070675_100009373 3300005354 Bacteria 7616
9 Ga0070673_100032814 3300005364 Bacteria 3914
10 Ga0070688_100004589 3300005365 Bacteria 7206
11 Ga0070667_100020156 3300005367 Bacteria 5536
12 Ga0070714_100000383 3300005435 Bacteria 33019
13 Ga0070714_100011405 3300005435 Bacteria 7051
14 Ga0070713_100000195 3300005436 Bacteria 40439
15 Ga0070711_100002628 3300005439 Bacteria 10281
16 Ga0070711_100015937 3300005439 Bacteria 4763
17 Ga0070708_100012344 3300005445 Bacteria 6968
18 Ga0070678_100061126 3300005456 Bacteria 2776
19 Ga0070662_100023404 3300005457 Bacteria 4242
20 Ga0070685_10042707 3300005466 Bacteria 2588
21 Ga0070706_100002531 3300005467 Bacteria 18381
22 Ga0070706_100057433 3300005467 Bacteria 3591
23 Ga0070706_100076455 3300005467 Bacteria 3098
24 Ga0070707_100001865 3300005468 Bacteria 20262
25 Ga0070707_100140702 3300005468 Bacteria 2348
26 Ga0070698_100022493 3300005471 Bacteria 6595
27 Ga0070679_100039250 3300005530 Bacteria 4706
28 Ga0070684_100035510 3300005535 Bacteria 4266
29 Ga0070684_100083892 3300005535 Bacteria 2824
30 Ga0070697_100013645 3300005536 Bacteria 6374
31 Ga0070697_100029759 3300005536 Bacteria 4381
32 Ga0070686_100012728 3300005544 Bacteria 4802
33 Ga0068855_100019670 3300005563 Bacteria 8109
34 Ga0070664_100000739 3300005564 Bacteria 25188
35 Ga0070664_100012173 3300005564 Bacteria 6991
36 Ga0070664_100029743 3300005564 Bacteria 4555
37 Ga0070664_100056687 3300005564 Bacteria 3329
38 Ga0068857_100028063 3300005577 Bacteria 4965
39 Ga0068863_100007288 3300005841 Bacteria 10832
40 Ga0068863_100017197 3300005841 Bacteria 6936
41 Ga0068858_100022229 3300005842 Bacteria 5923
42 Ga0068858_100070436 3300005842 Bacteria 3241
43 Ga0068860_100003628 3300005843 Bacteria 15872
44 Ga0068860_100028035 3300005843 Bacteria 5423
45 Ga0068862_100082922 3300005844 Bacteria 2784
46 Ga0081455_10000317 3300005937 Bacteria 63219
47 Ga0081538_10012172 3300005981 Bacteria 6914
48 Ga0070717_10002160 3300006028 Bacteria 13791
49 Ga0070717_10012768 3300006028 Bacteria 6412
50 Ga0070717_10038087 3300006028 Bacteria 3907
51 Ga0070716_100003403 3300006173 Bacteria 7482
52 Ga0070712_100000068 3300006175 Bacteria 52953
53 Ga0097621_100004537 3300006237 Bacteria 9684
54 Ga0097621_100005445 3300006237 Bacteria 8966
55 Ga0097621_100037319 3300006237 Bacteria 3893
56 Ga0068871_100003874 3300006358 Bacteria 10316
57 Ga0075428_100004411 3300006844 Bacteria 15540
58 Ga0075433_10009906 3300006852 Bacteria 7641
59 Ga0075433_10023893 3300006852 Bacteria 5151
60 Ga0075434_100000560 3300006871 Bacteria 28562
61 Ga0075434_100017794 3300006871 Bacteria 6855
62 Ga0075434_100028243 3300006871 Bacteria 5510
63 Ga0075436_100001512 3300006914 Bacteria 15855
64 Ga0075435_100002444 3300007076 Bacteria 12332
65 Ga0075435_100006675 3300007076 Bacteria 8182
66 Ga0111539_10021665 3300009094 Bacteria 7905
67 Ga0111539_10038295 3300009094 Bacteria 5784
68 Ga0105245_10005926 3300009098 Bacteria 10736
69 Ga0105245_10013907 3300009098 Bacteria 7009
70 Ga0105245_10015429 3300009098 Bacteria 6660
71 Ga0114129_10040290 3300009147 Bacteria 6585
72 Ga0114129_10045212 3300009147 Bacteria 6190
73 Ga0114129_10095201 3300009147 Bacteria 4124
74 Ga0114129_10167219 3300009147 Bacteria 3000
75 Ga0105242_10004832 3300009176 Bacteria 10431
76 Ga0105242_10013694 3300009176 Bacteria 6275
77 Ga0105248_10016568 3300009177 Bacteria 8116
78 Ga0105248_10022061 3300009177 Bacteria 7054
79 Ga0105248_10024312 3300009177 Bacteria 6737
80 Ga0157373_10029764 3300013100 Bacteria 3931
81 Ga0157369_10020869 3300013105 Bacteria 7323
82 Ga0157374_10045441 3300013296 Bacteria 4065
83 Ga0157378_10031800 3300013297 Bacteria 4661
84 Ga0163162_10075512 3300013306 Bacteria 3431
85 Ga0157372_10061676 3300013307 Bacteria 4199
86 Ga0157375_10006968 3300013308 Bacteria 9869
87 Ga0163163_10034386 3300014325 Bacteria 4907
88 Ga0157380_10104474 3300014326 Bacteria 2366
89 Ga0157377_10022711 3300014745 Bacteria 3317
90 Ga0157379_10037715 3300014968 Bacteria 4310
91 Ga0157376_10044834 3300014969 Bacteria 3637
92 Ga0213871_10001642 3300021441 Bacteria 3840
93 Ga0207697_10010502 3300025315 Bacteria 3955
94 Ga0207692_10015912 3300025898 Bacteria 3319
95 Ga0207680_10003293 3300025903 Bacteria 7612
96 Ga0207684_10032849 3300025910 Bacteria 4413
97 Ga0207693_10000057 3300025915 Bacteria 94894
98 Ga0207663_10031729 3300025916 Bacteria 3130
99 Ga0207657_10005940 3300025919 Bacteria 12705
100 Ga0207649_10037275 3300025920 Bacteria 2936
101 Ga0207646_10001578 3300025922 Bacteria 27846
102 Ga0207646_10040363 3300025922 Bacteria 4196
103 Ga0207659_10000239 3300025926 Bacteria 33343
104 Ga0207687_10004726 3300025927 Bacteria 9061
105 Ga0207700_10000377 3300025928 Bacteria 26049
106 Ga0207664_10001560 3300025929 Bacteria 15032
107 Ga0207664_10012015 3300025929 Bacteria 6182
108 Ga0207706_10000577 3300025933 Bacteria 39086
109 Ga0207706_10009519 3300025933 Bacteria 8921
110 Ga0207670_10003371 3300025936 Bacteria 8477
111 Ga0207670_10017945 3300025936 Bacteria 4288
112 Ga0207665_10002663 3300025939 Bacteria 11997
113 Ga0207665_10006688 3300025939 Bacteria 7650
114 Ga0207691_10000809 3300025940 Bacteria 31148
115 Ga0207691_10073194 3300025940 Bacteria 3090
116 Ga0207711_10012030 3300025941 Bacteria 7193
117 Ga0207711_10019254 3300025941 Bacteria 5683
118 Ga0207689_10030058 3300025942 Bacteria 4529
119 Ga0207679_10000833 3300025945 Bacteria 19861
120 Ga0207651_10056876 3300025960 Bacteria 2695
121 Ga0207703_10004736 3300026035 Bacteria 11104
122 Ga0207703_10007182 3300026035 Bacteria 8862
123 Ga0207641_10113888 3300026088 Bacteria 2402
124 Ga0207674_10126220 3300026116 Bacteria 2524
125 Ga0207428_10017948 3300027907 Bacteria 6060
126 Ga0268265_10082365 3300028380 Bacteria 2544
127 Ga0268264_10001309 3300028381 Bacteria 23465
128 Ga0268264_10028186 3300028381 Bacteria 4592
129 Ga0265338_10039516 3300028800 Bacteria 4449
130 Ga0265325_10001556 3300031241 Bacteria 15997
131 Ga0265316_10032358 3300031344 Bacteria 4268
132 Ga0307413_10005810 3300031824 Bacteria 5557
133 Ga0373954_0018064 3300035118 Bacteria 3172
134 Ga0373955_0024295 3300035172 Bacteria 3098
135 Ga0373935_0033329 3300035692 Bacteria 3204
136 Ga0373927_0001229 3300035695 Bacteria 19456
137 Ga0373933_0006116 3300035724 Bacteria 6552
138 Ga0373933_0008654 3300035724 Bacteria 5549
139 Ga0373947_0002013 3300035725 Bacteria 12409
140 Ga0373947_0003851 3300035725 Bacteria 8831
141 Ga0373937_0019593 3300036401 Bacteria 6055
142 Ga0373937_0028293 3300036401 Bacteria 5071
143 Ga0316584_0021988 3300036712 Bacteria 4646
144 Ga0373925_0000229 3300037068 Bacteria 59752
145 Ga0373925_0002846 3300037068 Bacteria 13657
146 Ga0436360_0908650 3300039438 Bacteria 11604
147 Ga0451577_0012794 3300042876 Bacteria 7873
148 Ga0453684_0030446 3300044712 Bacteria 7625
149 Ga0453684_0052463 3300044712 Bacteria 5331
150 Ga0451576_0008405 3300045051 Bacteria 12118
151 Ga0451576_0013604 3300045051 Bacteria 9094
152 Ga0451576_0035547 3300045051 Bacteria 5284
153 Ga0495603_0029166 3300046455 Bacteria 3328
154 Ga0495629_0005805 3300046459 Bacteria 9209
155 Ga0495651_0068000 3300046462 Bacteria 2716
156 Ga0495580_0000961 3300046472 Bacteria 25258
157 Ga0495580_0028301 3300046472 Bacteria 4074
158 Ga0495580_0034568 3300046472 Bacteria 3639
159 Ga0495582_0000916 3300046473 Bacteria 16418
160 Ga0495594_0002752 3300046499 Bacteria 9127
161 Ga0495594_0014539 3300046499 Bacteria 4125
162 Ga0495644_0001998 3300046523 Bacteria 8193
163 Ga0495640_0074874 3300046533 Bacteria 2262
164 Ga0495658_0012263 3300046683 Bacteria 4335
165 Ga0495674_0009236 3300047319 Bacteria 9370
166 Ga0495674_0010644 3300047319 Bacteria 8703
167 Ga0495684_0009830 3300047471 Bacteria 7382
168 Ga0496112_0024414 3300048915 Bacteria 5788
169 Ga0496115_0009225 3300048918 Bacteria 7325
170 Ga0501296_000073 3300049519 Bacteria 11647
171 Ga0501297_001213 3300049520 Bacteria 2351
172 Ga0501072_0044852 3300049588 Bacteria 3476
173 Ga0501075_0103028 3300049591 Bacteria 2168
174 Ga0501209_000593 3300049656 Bacteria 4488
175 Ga0501217_000277 3300049661 Bacteria 8052
176 Ga0501235_001805 3300049669 Bacteria 4594
177 Ga0501229_000521 3300049706 Bacteria 4344
178 Ga0501265_000371 3300049762 Bacteria 4630
179 Ga0501279_000097 3300049775 Bacteria 13731
180 nmdc:mga05p37_1146_c1 3300050507 Bacteria 30503
181 nmdc:mga05p37_23783_c1 3300050507 Bacteria 7440
182 nmdc:mga0n895_25353_c1 3300050512 Bacteria 5601
183 nmdc:mga0n895_5094_c1 3300050512 Bacteria 10915
184 nmdc:mga0n895_8296_c1 3300050512 Bacteria 8986
185 nmdc:mga0rr50_13407_c1 3300050513 Bacteria 5335
186 nmdc:mga0rr50_859_c1 3300050513 Bacteria 16392
187 nmdc:mga08x19_1793_c1 3300050514 Bacteria 13197
188 nmdc:mga0a205_1452_c1 3300050515 Bacteria 20199
189 nmdc:mga0a205_157051_c1 3300050515 Bacteria 2173
190 nmdc:mga0a205_45722_c1 3300050515 Bacteria 4222
191 nmdc:mga0a205_58372_c1 3300050515 Bacteria 3727
192 Ga0501082_0026609 3300060353 Bacteria 4986
193 Ga0070714_100025302
194 rootL2_10247684
195 Ga0065715_10003612
196 Ga0070676_10008291
197 Ga0070690_100016314
198 Ga0070689_100000851
199 Ga0070689_100007015
200 Ga0070675_100009373
201 Ga0070673_100032814
202 Ga0070688_100004589
203 Ga0070667_100020156
204 Ga0070714_100000383
205 Ga0070714_100011405
206 Ga0070713_100000195
207 Ga0070711_100002628
208 Ga0070711_100015937
209 Ga0070708_100012344
210 Ga0070678_100061126
211 Ga0070662_100023404
212 Ga0070685_10042707
213 Ga0070706_100002531
214 Ga0070706_100057433
215 Ga0070706_100076455
216 Ga0070707_100001865
217 Ga0070707_100140702
218 Ga0070698_100022493
219 Ga0070679_100039250
220 Ga0070684_100035510
221 Ga0070684_100083892
222 Ga0070697_100013645
223 Ga0070697_100029759
224 Ga0070686_100012728
225 Ga0068855_100019670
226 Ga0070664_100000739
227 Ga0070664_100012173
228 Ga0070664_100029743
229 Ga0070664_100056687
230 Ga0068857_100028063
231 Ga0068863_100007288
232 Ga0068863_100017197
233 Ga0068858_100022229
234 Ga0068858_100070436
235 Ga0068860_100003628
236 Ga0068860_100028035
237 Ga0068862_100082922
238 Ga0081455_10000317
239 Ga0081538_10012172
240 Ga0070717_10002160
241 Ga0070717_10012768
242 Ga0070717_10038087
243 Ga0070716_100003403
244 Ga0070712_100000068
245 Ga0097621_100004537
246 Ga0097621_100005445
247 Ga0097621_100037319
248 Ga0068871_100003874
249 Ga0075428_100004411
250 Ga0075433_10009906
251 Ga0075433_10023893
252 Ga0075434_100000560
253 Ga0075434_100017794
254 Ga0075434_100028243
255 Ga0075436_100001512
256 Ga0075435_100002444
257 Ga0075435_100006675
258 Ga0111539_10021665
259 Ga0111539_10038295
260 Ga0105245_10005926
261 Ga0105245_10013907
262 Ga0105245_10015429
263 Ga0114129_10040290
264 Ga0114129_10045212
265 Ga0114129_10095201
266 Ga0114129_10167219
267 Ga0105242_10004832
268 Ga0105242_10013694
269 Ga0105248_10016568
270 Ga0105248_10022061
271 Ga0105248_10024312
272 Ga0157373_10029764
273 Ga0157369_10020869
274 Ga0157374_10045441
275 Ga0157378_10031800
276 Ga0163162_10075512
277 Ga0157372_10061676
278 Ga0157375_10006968
279 Ga0163163_10034386
280 Ga0157380_10104474
281 Ga0157377_10022711
282 Ga0157379_10037715
283 Ga0157376_10044834
284 Ga0213871_10001642
285 Ga0207697_10010502
286 Ga0207692_10015912
287 Ga0207680_10003293
288 Ga0207684_10032849
289 Ga0207693_10000057
290 Ga0207663_10031729
291 Ga0207657_10005940
292 Ga0207649_10037275
293 Ga0207646_10001578
294 Ga0207646_10040363
295 Ga0207659_10000239
296 Ga0207687_10004726
297 Ga0207700_10000377
298 Ga0207664_10001560
299 Ga0207664_10012015
300 Ga0207706_10000577
301 Ga0207706_10009519
302 Ga0207670_10003371
303 Ga0207670_10017945
304 Ga0207665_10002663
305 Ga0207665_10006688
306 Ga0207691_10000809
307 Ga0207691_10073194
308 Ga0207711_10012030
309 Ga0207711_10019254
310 Ga0207689_10030058
311 Ga0207679_10000833
312 Ga0207651_10056876
313 Ga0207703_10004736
314 Ga0207703_10007182
315 Ga0207641_10113888
316 Ga0207674_10126220
317 Ga0207428_10017948
318 Ga0268265_10082365
319 Ga0268264_10001309
320 Ga0268264_10028186
321 Ga0265338_10039516
322 Ga0265325_10001556
323 Ga0265316_10032358
324 Ga0307413_10005810
325 Ga0373954_0018064
326 Ga0373955_0024295
327 Ga0373935_0033329
328 Ga0373927_0001229
329 Ga0373933_0006116
330 Ga0373933_0008654
331 Ga0373947_0002013
332 Ga0373947_0003851
333 Ga0373937_0019593
334 Ga0373937_0028293
335 Ga0316584_0021988
336 Ga0373925_0000229
337 Ga0373925_0002846
338 Ga0436360_0908650
339 Ga0451577_0012794
340 Ga0453684_0030446
341 Ga0453684_0052463
342 Ga0451576_0008405
343 Ga0451576_0013604
344 Ga0451576_0035547
345 Ga0495603_0029166
346 Ga0495629_0005805
347 Ga0495651_0068000
348 Ga0495580_0000961
349 Ga0495580_0028301
350 Ga0495580_0034568
351 Ga0495582_0000916
352 Ga0495594_0002752
353 Ga0495594_0014539
354 Ga0495644_0001998
355 Ga0495640_0074874
356 Ga0495658_0012263
357 Ga0495674_0009236
358 Ga0495674_0010644
359 Ga0495684_0009830
360 Ga0496112_0024414
361 Ga0496115_0009225
362 Ga0501296_000073
363 Ga0501297_001213
364 Ga0501072_0044852
365 Ga0501075_0103028
366 Ga0501209_000593
367 Ga0501217_000277
368 Ga0501235_001805
369 Ga0501229_000521
370 Ga0501265_000371
371 Ga0501279_000097
372 nmdc:mga05p37_1146_c1
373 nmdc:mga05p37_23783_c1
374 nmdc:mga0n895_25353_c1
375 nmdc:mga0n895_5094_c1
376 nmdc:mga0n895_8296_c1
377 nmdc:mga0rr50_13407_c1
378 nmdc:mga0rr50_859_c1
379 nmdc:mga08x19_1793_c1
380 nmdc:mga0a205_1452_c1
381 nmdc:mga0a205_157051_c1
382 nmdc:mga0a205_45722_c1
383 nmdc:mga0a205_58372_c1
384 Ga0501082_0026609

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02922

CBM_48

Carbohydrate-binding module 48 (Isoamylase N-terminal domain)

62

151

0.89

PF21156

ISOA1-3_C

Isoamylase 1-3, C-terminal

631

714

0.88

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

225

323

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
2wsk-assembly1.cif.gz_A crystal structure of glycogen debranching enzyme glgx from escherichia coli k-12 0.8885 11 687
4j7r-assembly1.cif.gz_B crystal structure of chlamydomonas reinhardtii isoamylase 1 (isa1) 0.8879 13 688
7u3b-assembly2.cif.gz_F structure of s. venezuelae glgx bound to c-di-gmp and acarbose (ph 8.5) 0.8834 13 689
2wsk-assembly1.cif.gz_A crystal structure of glycogen debranching enzyme glgx from escherichia coli k-12 0.8833 11 687
7u3a-assembly2.cif.gz_D structure of the streptomyces venezuelae glgx-c-di-gmp complex 0.8827 13 688
ID Description Score Start End Superfamily
af_A0A1D6ERN6_94_277_3.30.750.90 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9417 145 314 3.30.750.90
af_D0TZF0_227_692_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9211 142 572 3.20.20.80
af_Q9M0S5_672_764_2.60.40.1180 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9144 592 688 2.60.40.1180
af_A0A1D6PXQ9_198_442_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9049 142 358 3.20.20.80
af_K7KF62_337_747_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.8986 140 572 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A2V7F270-F1-model_v4 Glycogen debranching enzyme 0.9791 22 219 GO:0004553
GO:0005975
AF-A0A2V8EA12-F1-model_v4 Glycogen debranching enzyme 0.9774 11 329 GO:0004553
GO:0005975
AF-A0A355EIV4-F1-model_v4 Glycogen debranching enzyme 0.9718 11 430 GO:0004553
GO:0005975
AF-A0A7Y5BVY9-F1-model_v4 Glycogen debranching enzyme 0.9695 11 355 GO:0004553
GO:0005975
AF-A0A2V7F270-F1-model_v4 Glycogen debranching enzyme 0.9695 22 219 GO:0004553
GO:0005975

Map