F294693

General Info

Members Datasets Scaffolds Average Seq Length
191 137 190 169

Family's Representative Sequence

Representative Sequence 3300049573|Ga0501037_0393145|Ga0501037_0393145_376_924
Length 182
Sequence MTEVKNRKEGRGVLMADRIEPWLRGTLTDVDAVRRAVLHALELAAEDVARWCDGLNGEQMEERPMGLPPVGFHLRHIARSLDRLLTYAENQQLSERQMALLKTEDRGVDRESTLMEFAEAIEISTRRILAFSEKSYGQPRLVGRKRLPTTVGGLLIHCADHTQRHVGQAITTTKIVIASRER

Samples

Sample ID Description Type Environment
1 2884215851 Edaphobacter sp. 12200R-103 Isolate Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
26 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
29 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
30 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
36 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
37 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
52 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
55 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
56 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
57 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
60 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
61 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
62 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
63 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
64 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
65 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
66 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
67 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
68 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
69 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
72 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
73 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
74 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
75 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
76 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
77 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
78 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
79 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
80 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
81 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
82 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
83 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
84 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
85 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
86 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
87 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
88 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
89 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
90 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
91 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
92 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
93 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
94 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
95 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
96 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
97 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
98 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
99 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
100 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
105 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
108 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
109 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
110 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
111 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
112 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
116 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
132 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
135 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
136 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
137 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.43
Metatranscriptomes 1.05
Isolates 0.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.09
Nodule 0
Rhizoplane 1.57
Rhizosphere 93.72
Stem 0
Stem Tuber 0
Unclassified 2.62

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10294734 3300003320 Unclassified 1165
2 Ga0070658_10000010 3300005327 Bacteria 297212
3 Ga0070658_10088063 3300005327 Bacteria 2556
4 Ga0070682_100190832 3300005337 Unclassified 1438
5 Ga0070660_100250449 3300005339 Unclassified 1444
6 Ga0070661_100321647 3300005344 Unclassified 1208
7 Ga0070714_100065481 3300005435 Bacteria 3130
8 Ga0070713_100384161 3300005436 Bacteria 1309
9 Ga0070710_10034338 3300005437 Bacteria 2759
10 Ga0070663_100238471 3300005455 Bacteria 1434
11 Ga0070663_100247383 3300005455 Unclassified 1410
12 Ga0070663_100294403 3300005455 Bacteria 1297
13 Ga0070663_100377886 3300005455 Bacteria 1153
14 Ga0070665_100126561 3300005548 Bacteria 2557
15 Ga0070665_100301800 3300005548 Unclassified 1604
16 Ga0068855_100075410 3300005563 Bacteria 3916
17 Ga0068855_101988948 3300005563 Unclassified 587
18 Ga0068854_100431853 3300005578 Bacteria 1096
19 Ga0068856_100427779 3300005614 Bacteria 1344
20 Ga0068852_100189052 3300005616 Unclassified 1942
21 Ga0068866_10260521 3300005718 Bacteria 1065
22 Ga0070712_100013613 3300006175 Bacteria 5202
23 Ga0105240_10360236 3300009093 Bacteria 1648
24 Ga0105243_10068597 3300009148 Bacteria 2858
25 Ga0105248_10590134 3300009177 Bacteria 1254
26 Ga0105237_11313490 3300009545 Unclassified 730
27 Ga0105238_10016264 3300009551 Bacteria 7529
28 Ga0105249_10015234 3300009553 Bacteria 6805
29 Ga0105239_10223085 3300010375 Unclassified 2114
30 Ga0157373_10861453 3300013100 Unclassified 671
31 Ga0157371_10473885 3300013102 Bacteria 922
32 Ga0157370_10046670 3300013104 Bacteria 4153
33 Ga0157370_10260890 3300013104 Bacteria 1601
34 Ga0157370_10295308 3300013104 Unclassified 1496
35 Ga0157370_10956038 3300013104 Bacteria 776
36 Ga0157369_10026027 3300013105 Bacteria 6492
37 Ga0157369_10185600 3300013105 Unclassified 2187
38 Ga0157374_10019906 3300013296 Bacteria 5948
39 Ga0157374_10316442 3300013296 Bacteria 1546
40 Ga0157374_10955220 3300013296 Bacteria 876
41 Ga0163162_10999900 3300013306 Bacteria 945
42 Ga0157372_10095592 3300013307 Bacteria 3385
43 Ga0163163_12122477 3300014325 Unclassified 621
44 Ga0157379_10012994 3300014968 Bacteria 7287
45 Ga0157379_10318575 3300014968 Bacteria 1420
46 Ga0157376_10012541 3300014969 Bacteria 6294
47 Ga0157376_10373977 3300014969 Bacteria 1370
48 Ga0224572_1012911 3300024225 Bacteria 1592
49 Ga0209233_1012669 3300025261 Bacteria 2436
50 Ga0207692_10157800 3300025898 Unclassified 1305
51 Ga0207705_10000016 3300025909 Bacteria 377359
52 Ga0207705_10065021 3300025909 Bacteria 2636
53 Ga0207671_11079986 3300025914 Unclassified 631
54 Ga0207693_10140513 3300025915 Bacteria 1899
55 Ga0207657_10560031 3300025919 Bacteria 893
56 Ga0207694_10003331 3300025924 Bacteria 12776
57 Ga0207664_10935872 3300025929 Unclassified 777
58 Ga0207665_10039857 3300025939 Bacteria 3133
59 Ga0207667_10002461 3300025949 Bacteria 23142
60 Ga0207667_10141216 3300025949 Bacteria 2479
61 Ga0207667_11799755 3300025949 Unclassified 577
62 Ga0207712_10067337 3300025961 Bacteria 2562
63 Ga0207678_10018079 3300026067 Bacteria 6191
64 Ga0207678_10163287 3300026067 Bacteria 1902
65 Ga0207678_10400330 3300026067 Bacteria 1189
66 Ga0207702_10076788 3300026078 Bacteria 2888
67 Ga0207702_10706816 3300026078 Bacteria 993
68 Ga0207648_10452337 3300026089 Bacteria 1169
69 Ga0268266_10003847 3300028379 Bacteria 14656
70 Ga0268266_10043903 3300028379 Bacteria 3820
71 Ga0265338_10065072 3300028800 Bacteria 3166
72 Ga0265765_1017284 3300030879 Bacteria 850
73 Ga0265760_10026693 3300031090 Unclassified 1691
74 Ga0265339_10238455 3300031249 Bacteria 884
75 Ga0307510_10053479 3300033180 Bacteria 4243
76 Ga0316212_1004909 3300033547 Unclassified 1941
77 Ga0395900_0289884 3300037418 Bacteria 1626
78 Ga0395900_0468764 3300037418 Unclassified 1213
79 Ga0395898_0525871 3300037466 Bacteria 1124
80 Ga0466966_0208596 3300044684 Bacteria 1181
81 Ga0466963_0434731 3300044694 Bacteria 926
82 Ga0466959_0089392 3300045049 Unclassified 2213
83 Ga0466959_0106778 3300045049 Bacteria 2002
84 Ga0466959_0180501 3300045049 Bacteria 1476
85 Ga0495592_0401304 3300046454 Bacteria 868
86 Ga0495603_0008277 3300046455 Bacteria 6286
87 Ga0495603_0064906 3300046455 Bacteria 2152
88 Ga0495590_0069482 3300046457 Unclassified 1235
89 Ga0495629_0030674 3300046459 Bacteria 3810
90 Ga0495629_0297617 3300046459 Bacteria 1105
91 Ga0495651_0021949 3300046462 Bacteria 4965
92 Ga0495653_0068254 3300046463 Bacteria 2667
93 Ga0495650_0000010 3300046471 Bacteria 645599
94 Ga0495650_0015213 3300046471 Unclassified 3956
95 Ga0495580_0304955 3300046472 Bacteria 1084
96 Ga0495580_0353319 3300046472 Bacteria 995
97 Ga0495582_0017051 3300046473 Bacteria 3977
98 Ga0495582_0037681 3300046473 Bacteria 2659
99 Ga0495639_0001589 3300046475 Bacteria 10130
100 Ga0495662_0000645 3300046476 Bacteria 16330
101 Ga0495664_0059420 3300046477 Unclassified 2276
102 Ga0495664_0061069 3300046477 Bacteria 2244
103 Ga0495594_0001581 3300046499 Bacteria 11833
104 Ga0495594_0013311 3300046499 Bacteria 4292
105 Ga0495583_0080076 3300046506 Unclassified 1420
106 Ga0495583_0087297 3300046506 Bacteria 1348
107 Ga0495583_0132238 3300046506 Bacteria 1043
108 Ga0495606_0300343 3300046507 Unclassified 870
109 Ga0495616_0056053 3300046513 Bacteria 1948
110 Ga0495628_0001223 3300046516 Bacteria 23508
111 Ga0495628_0099655 3300046516 Bacteria 2244
112 Ga0495630_0054279 3300046517 Bacteria 3002
113 Ga0495631_0173811 3300046518 Bacteria 923
114 Ga0495631_0183629 3300046518 Bacteria 896
115 Ga0495644_0000118 3300046523 Bacteria 37646
116 Ga0495652_0003190 3300046529 Bacteria 16339
117 Ga0495665_0024060 3300046531 Bacteria 3271
118 Ga0495640_0002236 3300046533 Bacteria 15504
119 Ga0495609_0030897 3300046538 Unclassified 2438
120 Ga0495609_0040626 3300046538 Bacteria 2092
121 Ga0495645_0026658 3300046543 Bacteria 4196
122 Ga0495667_0001549 3300046559 Bacteria 15245
123 Ga0495668_0020934 3300046616 Bacteria 3757
124 Ga0495634_0002593 3300046642 Bacteria 14886
125 Ga0495625_0054829 3300046660 Bacteria 2846
126 Ga0495625_0143453 3300046660 Bacteria 1610
127 Ga0495625_0738429 3300046660 Unclassified 578
128 Ga0495635_0012902 3300046663 Bacteria 5850
129 Ga0495659_0113651 3300046664 Bacteria 1059
130 Ga0495661_0122328 3300046665 Unclassified 1435
131 Ga0495599_0001357 3300046678 Bacteria 13983
132 Ga0495599_0126545 3300046678 Unclassified 1588
133 Ga0495646_0030736 3300046680 Bacteria 3352
134 Ga0495669_0006719 3300046684 Bacteria 4815
135 Ga0495613_0005516 3300046689 Bacteria 9500
136 Ga0495613_0009988 3300046689 Bacteria 7052
137 Ga0495624_0344398 3300046690 Bacteria 896
138 Ga0495589_0257976 3300046794 Bacteria 813
139 Ga0495600_0003635 3300046809 Bacteria 9095
140 Ga0495600_0340378 3300046809 Unclassified 941
141 Ga0495581_0000228 3300047315 Bacteria 26396
142 Ga0495581_0255841 3300047315 Bacteria 1024
143 Ga0495604_0254009 3300047317 Unclassified 1197
144 Ga0495674_0034302 3300047319 Unclassified 4590
145 Ga0495674_0036215 3300047319 Bacteria 4444
146 Ga0495672_0002914 3300047320 Bacteria 15141
147 Ga0495676_0013756 3300047321 Bacteria 7255
148 Ga0495680_0012626 3300047322 Bacteria 7422
149 Ga0495683_0024074 3300047323 Bacteria 3127
150 Ga0495675_0000944 3300047444 Bacteria 17626
151 Ga0495673_0059209 3300047469 Bacteria 1647
152 Ga0495673_0072087 3300047469 Bacteria 1451
153 Ga0495673_0156929 3300047469 Bacteria 876
154 Ga0495686_0000093 3300047472 Bacteria 188735
155 Ga0495686_0040371 3300047472 Bacteria 2976
156 Ga0495593_0005453 3300047673 Bacteria 7515
157 Ga0495593_0375877 3300047673 Unclassified 710
158 Ga0495614_0000079 3300048089 Bacteria 32033
159 Ga0495614_0001908 3300048089 Bacteria 9149
160 Ga0496104_0000049 3300048907 Bacteria 144754
161 Ga0496105_0196634 3300048908 Unclassified 1647
162 Ga0496105_0208630 3300048908 Unclassified 1593
163 Ga0496126_0000005 3300048929 Bacteria 891906
164 Ga0496126_0195492 3300048929 Bacteria 1711
165 Ga0501031_0044450 3300049568 Bacteria 2899
166 Ga0501032_0004642 3300049569 Bacteria 10325
167 Ga0501033_0108738 3300049570 Bacteria 2019
168 Ga0501034_0012478 3300049571 Bacteria 8778
169 Ga0501036_0021821 3300049572 Bacteria 5383
170 Ga0501037_0110924 3300049573 Bacteria 1976
171 Ga0501037_0393145 3300049573 Bacteria 952
172 Ga0501038_0002278 3300049574 Bacteria 17853
173 Ga0501038_0853090 3300049574 Bacteria 674
174 Ga0501039_0042132 3300049575 Bacteria 3528
175 Ga0501043_0009547 3300049579 Bacteria 7606
176 Ga0501046_0000448 3300049580 Bacteria 41389
177 Ga0501047_0000517 3300049581 Bacteria 41739
178 Ga0501048_0263169 3300049582 Bacteria 1225
179 Ga0501070_0092299 3300049586 Bacteria 2506
180 Ga0501073_0017882 3300049589 Bacteria 5129
181 Ga0501073_0954554 3300049589 Bacteria 590
182 Ga0501074_0063597 3300049590 Bacteria 2658
183 Ga0501079_0984995 3300049741 Unclassified 664
184 Ga0501083_0470545 3300049744 Unclassified 818
185 Ga0501035_0040400 3300049822 Bacteria 4215
186 Ga0501044_0018099 3300049823 Bacteria 7555
187 Ga0501044_0024458 3300049823 Bacteria 6409
188 Ga0500651_0000008 3300053093 Bacteria 287738
189 Ga0500595_053487 3300053119 Bacteria 1243
190 Ga0500661_001396 3300055283 Bacteria 4511

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005578 Ga0068854_100431853 Ga0068854_1004318532 136
2 3300046660 Ga0495625_0054829 Ga0495625_0054829_399_908 150
3 3300046463 Ga0495653_0068254 Ga0495653_0068254_2159_2623 152
4 3300037418 Ga0395900_0289884 Ga0395900_0289884_968_1429 153
5 3300037466 Ga0395898_0525871 Ga0395898_0525871_165_626 153
6 3300025919 Ga0207657_10560031 Ga0207657_105600312 155
7 3300046516 Ga0495628_0099655 Ga0495628_0099655_1212_1691 159
8 3300046678 Ga0495599_0126545 Ga0495599_0126545_943_1422 159
9 3300047319 Ga0495674_0034302 Ga0495674_0034302_2306_2785 159
10 3300031249 Ga0265339_10238455 Ga0265339_102384552 162
11 3300009177 Ga0105248_10590134 Ga0105248_105901342 164
12 3300024225 Ga0224572_1012911 Ga0224572_10129111 164
13 iso_pu_bacteria 2884215851 2884216156 164
14 3300005327 Ga0070658_10088063 Ga0070658_100880633 165
15 3300005339 Ga0070660_100250449 Ga0070660_1002504492 165
16 3300005455 Ga0070663_100238471 Ga0070663_1002384712 165
17 3300005563 Ga0068855_100075410 Ga0068855_1000754105 165
18 3300005563 Ga0068855_101988948 Ga0068855_1019889481 165
19 3300005616 Ga0068852_100189052 Ga0068852_1001890522 165
20 3300013102 Ga0157371_10473885 Ga0157371_104738852 165
21 3300013104 Ga0157370_10260890 Ga0157370_102608901 165
22 3300013104 Ga0157370_10295308 Ga0157370_102953082 165
23 3300013105 Ga0157369_10026027 Ga0157369_100260276 165
24 3300013307 Ga0157372_10095592 Ga0157372_100955922 165
25 3300025909 Ga0207705_10065021 Ga0207705_100650214 165
26 3300025949 Ga0207667_10141216 Ga0207667_101412162 165
27 3300025949 Ga0207667_11799755 Ga0207667_117997551 165
28 3300026067 Ga0207678_10018079 Ga0207678_100180795 165
29 3300028800 Ga0265338_10065072 Ga0265338_100650723 165
30 3300037418 Ga0395900_0468764 Ga0395900_0468764_186_689 165
31 3300046472 Ga0495580_0304955 Ga0495580_0304955_562_1065 165
32 3300005548 Ga0070665_100301800 Ga0070665_1003018002 166
33 3300028379 Ga0268266_10003847 Ga0268266_100038472 166
34 3300028379 Ga0268266_10043903 Ga0268266_100439035 166
35 3300046471 Ga0495650_0015213 Ga0495650_0015213_956_1462 166
36 3300049568 Ga0501031_0044450 Ga0501031_0044450_889_1392 166
37 3300049569 Ga0501032_0004642 Ga0501032_0004642_178_681 166
38 3300049570 Ga0501033_0108738 Ga0501033_0108738_267_770 166
39 3300049571 Ga0501034_0012478 Ga0501034_0012478_178_681 166
40 3300049572 Ga0501036_0021821 Ga0501036_0021821_4544_5047 166
41 3300049573 Ga0501037_0110924 Ga0501037_0110924_1423_1926 166
42 3300049574 Ga0501038_0002278 Ga0501038_0002278_12451_12954 166
43 3300049575 Ga0501039_0042132 Ga0501039_0042132_1582_2085 166
44 3300049579 Ga0501043_0009547 Ga0501043_0009547_4486_4989 166
45 3300049580 Ga0501046_0000448 Ga0501046_0000448_34070_34573 166
46 3300049581 Ga0501047_0000517 Ga0501047_0000517_9315_9818 166
47 3300049582 Ga0501048_0263169 Ga0501048_0263169_289_792 166
48 3300049589 Ga0501073_0017882 Ga0501073_0017882_3976_4479 166
49 3300049590 Ga0501074_0063597 Ga0501074_0063597_747_1250 166
50 3300049741 Ga0501079_0984995 Ga0501079_0984995_92_595 166
51 3300049744 Ga0501083_0470545 Ga0501083_0470545_13_516 166
52 3300049822 Ga0501035_0040400 Ga0501035_0040400_306_809 166
53 3300049823 Ga0501044_0024458 Ga0501044_0024458_5483_5986 166
54 3300005337 Ga0070682_100190832 Ga0070682_1001908322 167
55 3300005344 Ga0070661_100321647 Ga0070661_1003216471 167
56 3300005437 Ga0070710_10034338 Ga0070710_100343383 167
57 3300005455 Ga0070663_100294403 Ga0070663_1002944032 167
58 3300005455 Ga0070663_100377886 Ga0070663_1003778862 167
59 3300005548 Ga0070665_100126561 Ga0070665_1001265612 167
60 3300006175 Ga0070712_100013613 Ga0070712_1000136132 167
61 3300009093 Ga0105240_10360236 Ga0105240_103602361 167
62 3300009545 Ga0105237_11313490 Ga0105237_113134901 167
63 3300013105 Ga0157369_10185600 Ga0157369_101856002 167
64 3300013296 Ga0157374_10019906 Ga0157374_100199064 167
65 3300013296 Ga0157374_10316442 Ga0157374_103164422 167
66 3300013306 Ga0163162_10999900 Ga0163162_109999002 167
67 3300014325 Ga0163163_12122477 Ga0163163_121224771 167
68 3300014969 Ga0157376_10373977 Ga0157376_103739772 167
69 3300025898 Ga0207692_10157800 Ga0207692_101578002 167
70 3300025915 Ga0207693_10140513 Ga0207693_101405133 167
71 3300025939 Ga0207665_10039857 Ga0207665_100398572 167
72 3300026067 Ga0207678_10400330 Ga0207678_104003301 167
73 3300026089 Ga0207648_10452337 Ga0207648_104523372 167
74 3300033180 Ga0307510_10053479 Ga0307510_100534793 167
75 3300044684 Ga0466966_0208596 Ga0466966_0208596_441_944 167
76 3300045049 Ga0466959_0089392 Ga0466959_0089392_43_546 167
77 3300046454 Ga0495592_0401304 Ga0495592_0401304_285_794 167
78 3300046455 Ga0495603_0064906 Ga0495603_0064906_1080_1589 167
79 3300046457 Ga0495590_0069482 Ga0495590_0069482_468_977 167
80 3300046459 Ga0495629_0030674 Ga0495629_0030674_1689_2198 167
81 3300046459 Ga0495629_0297617 Ga0495629_0297617_143_652 167
82 3300046462 Ga0495651_0021949 Ga0495651_0021949_53_562 167
83 3300046471 Ga0495650_0000010 Ga0495650_0000010_575061_575570 167
84 3300046472 Ga0495580_0353319 Ga0495580_0353319_384_893 167
85 3300046473 Ga0495582_0017051 Ga0495582_0017051_2180_2689 167
86 3300046473 Ga0495582_0037681 Ga0495582_0037681_879_1388 167
87 3300046475 Ga0495639_0001589 Ga0495639_0001589_7851_8360 167
88 3300046476 Ga0495662_0000645 Ga0495662_0000645_3247_3756 167
89 3300046477 Ga0495664_0061069 Ga0495664_0061069_54_563 167
90 3300046499 Ga0495594_0013311 Ga0495594_0013311_3656_4165 167
91 3300046506 Ga0495583_0080076 Ga0495583_0080076_825_1334 167
92 3300046506 Ga0495583_0132238 Ga0495583_0132238_232_738 167
93 3300046507 Ga0495606_0300343 Ga0495606_0300343_52_561 167
94 3300046516 Ga0495628_0001223 Ga0495628_0001223_1665_2174 167
95 3300046517 Ga0495630_0054279 Ga0495630_0054279_1746_2255 167
96 3300046518 Ga0495631_0183629 Ga0495631_0183629_35_541 167
97 3300046529 Ga0495652_0003190 Ga0495652_0003190_14297_14806 167
98 3300046531 Ga0495665_0024060 Ga0495665_0024060_2475_2984 167
99 3300046533 Ga0495640_0002236 Ga0495640_0002236_5013_5522 167
100 3300046538 Ga0495609_0030897 Ga0495609_0030897_1193_1702 167
101 3300046543 Ga0495645_0026658 Ga0495645_0026658_1356_1865 167
102 3300046559 Ga0495667_0001549 Ga0495667_0001549_2355_2864 167
103 3300046642 Ga0495634_0002593 Ga0495634_0002593_81_596 167
104 3300046660 Ga0495625_0143453 Ga0495625_0143453_693_1202 167
105 3300046660 Ga0495625_0738429 Ga0495625_0738429_25_537 167
106 3300046663 Ga0495635_0012902 Ga0495635_0012902_2544_3053 167
107 3300046664 Ga0495659_0113651 Ga0495659_0113651_243_752 167
108 3300046665 Ga0495661_0122328 Ga0495661_0122328_846_1352 167
109 3300046678 Ga0495599_0001357 Ga0495599_0001357_1403_1912 167
110 3300046680 Ga0495646_0030736 Ga0495646_0030736_2455_2964 167
111 3300046689 Ga0495613_0005516 Ga0495613_0005516_3675_4184 167
112 3300046689 Ga0495613_0009988 Ga0495613_0009988_2849_3358 167
113 3300046690 Ga0495624_0344398 Ga0495624_0344398_111_626 167
114 3300046809 Ga0495600_0003635 Ga0495600_0003635_2103_2612 167
115 3300047315 Ga0495581_0000228 Ga0495581_0000228_1800_2309 167
116 3300047315 Ga0495581_0255841 Ga0495581_0255841_360_869 167
117 3300047319 Ga0495674_0036215 Ga0495674_0036215_752_1261 167
118 3300047320 Ga0495672_0002914 Ga0495672_0002914_2635_3144 167
119 3300047321 Ga0495676_0013756 Ga0495676_0013756_3184_3693 167
120 3300047322 Ga0495680_0012626 Ga0495680_0012626_4985_5500 167
121 3300047444 Ga0495675_0000944 Ga0495675_0000944_14933_15442 167
122 3300047469 Ga0495673_0072087 Ga0495673_0072087_520_1029 167
123 3300047469 Ga0495673_0156929 Ga0495673_0156929_13_519 167
124 3300047673 Ga0495593_0005453 Ga0495593_0005453_4493_5002 167
125 3300047673 Ga0495593_0375877 Ga0495593_0375877_12_521 167
126 3300048089 Ga0495614_0000079 Ga0495614_0000079_4459_4968 167
127 3300048089 Ga0495614_0001908 Ga0495614_0001908_6208_6717 167
128 3300048908 Ga0496105_0208630 Ga0496105_0208630_999_1517 167
129 3300048929 Ga0496126_0195492 Ga0496126_0195492_265_777 167
130 3300049573 Ga0501037_0393145 Ga0501037_0393145_376_924 167
131 3300049574 Ga0501038_0853090 Ga0501038_0853090_104_652 167
132 3300049586 Ga0501070_0092299 Ga0501070_0092299_1085_1633 167
133 3300049589 Ga0501073_0954554 Ga0501073_0954554_67_573 167
134 3300049823 Ga0501044_0018099 Ga0501044_0018099_3203_3751 167
135 3300053093 Ga0500651_0000008 Ga0500651_0000008_159251_159757 167
136 3300055283 Ga0500661_001396 Ga0500661_001396_2044_2571 167
137 3300003320 rootH2_10294734 rootH2_102947342 168
138 3300005327 Ga0070658_10000010 Ga0070658_10000010198 168
139 3300005435 Ga0070714_100065481 Ga0070714_1000654811 168
140 3300005436 Ga0070713_100384161 Ga0070713_1003841611 168
141 3300005455 Ga0070663_100247383 Ga0070663_1002473832 168
142 3300005614 Ga0068856_100427779 Ga0068856_1004277792 168
143 3300005718 Ga0068866_10260521 Ga0068866_102605212 168
144 3300009148 Ga0105243_10068597 Ga0105243_100685973 168
145 3300009551 Ga0105238_10016264 Ga0105238_100162647 168
146 3300009553 Ga0105249_10015234 Ga0105249_100152346 168
147 3300010375 Ga0105239_10223085 Ga0105239_102230852 168
148 3300013100 Ga0157373_10861453 Ga0157373_108614531 168
149 3300013104 Ga0157370_10046670 Ga0157370_100466702 168
150 3300013104 Ga0157370_10956038 Ga0157370_109560382 168
151 3300013296 Ga0157374_10955220 Ga0157374_109552202 168
152 3300014968 Ga0157379_10012994 Ga0157379_100129946 168
153 3300014968 Ga0157379_10318575 Ga0157379_103185752 168
154 3300014969 Ga0157376_10012541 Ga0157376_100125417 168
155 3300025261 Ga0209233_1012669 Ga0209233_10126692 168
156 3300025909 Ga0207705_10000016 Ga0207705_10000016264 168
157 3300025914 Ga0207671_11079986 Ga0207671_110799861 168
158 3300025924 Ga0207694_10003331 Ga0207694_100033312 168
159 3300025929 Ga0207664_10935872 Ga0207664_109358721 168
160 3300025949 Ga0207667_10002461 Ga0207667_1000246120 168
161 3300025961 Ga0207712_10067337 Ga0207712_100673373 168
162 3300026067 Ga0207678_10163287 Ga0207678_101632872 168
163 3300026078 Ga0207702_10076788 Ga0207702_100767883 168
164 3300026078 Ga0207702_10706816 Ga0207702_107068161 168
165 3300030879 Ga0265765_1017284 Ga0265765_10172841 168
166 3300031090 Ga0265760_10026693 Ga0265760_100266932 168
167 3300033547 Ga0316212_1004909 Ga0316212_10049093 168
168 3300044694 Ga0466963_0434731 Ga0466963_0434731_352_900 168
169 3300045049 Ga0466959_0106778 Ga0466959_0106778_174_680 168
170 3300045049 Ga0466959_0180501 Ga0466959_0180501_843_1349 168
171 3300046455 Ga0495603_0008277 Ga0495603_0008277_3695_4207 168
172 3300046477 Ga0495664_0059420 Ga0495664_0059420_231_743 168
173 3300046499 Ga0495594_0001581 Ga0495594_0001581_9618_10130 168
174 3300046506 Ga0495583_0087297 Ga0495583_0087297_88_600 168
175 3300046513 Ga0495616_0056053 Ga0495616_0056053_905_1417 168
176 3300046518 Ga0495631_0173811 Ga0495631_0173811_354_866 168
177 3300046523 Ga0495644_0000118 Ga0495644_0000118_23572_24084 168
178 3300046538 Ga0495609_0040626 Ga0495609_0040626_1318_1830 168
179 3300046616 Ga0495668_0020934 Ga0495668_0020934_1455_1967 168
180 3300046684 Ga0495669_0006719 Ga0495669_0006719_526_1038 168
181 3300046794 Ga0495589_0257976 Ga0495589_0257976_126_638 168
182 3300046809 Ga0495600_0340378 Ga0495600_0340378_367_879 168
183 3300047317 Ga0495604_0254009 Ga0495604_0254009_665_1177 168
184 3300047323 Ga0495683_0024074 Ga0495683_0024074_2030_2542 168
185 3300047469 Ga0495673_0059209 Ga0495673_0059209_789_1301 168
186 3300047472 Ga0495686_0000093 Ga0495686_0000093_96884_97405 168
187 3300047472 Ga0495686_0040371 Ga0495686_0040371_2126_2647 168
188 3300048907 Ga0496104_0000049 Ga0496104_0000049_12461_12982 168
189 3300048908 Ga0496105_0196634 Ga0496105_0196634_822_1334 168
190 3300048929 Ga0496126_0000005 Ga0496126_0000005_163709_164227 168
191 3300053119 Ga0500595_053487 Ga0500595_053487_716_1225 168

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12867

DinB_2

DinB superfamily

40

169

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
8f5v-assembly1.cif.gz_B crystal structure of mycobacterium tuberculosis mycothiol s-transferase enzyme in complex with mycothiol and zn2+ 0.8088 18 161
8fx9-assembly1.cif.gz_A-2 crystal strucutre of mycobacterium tuberculosis mycothiol-s-transferase enzyme 0.8035 18 161
2p1a-assembly1.cif.gz_B crystal structure of a putative metal-binding protein (bce_2162) from bacillus cereus atcc 10987 at 2.10 a resolution 0.7901 17 159
2qe9-assembly1.cif.gz_B crystal structure of a putative metal-dependent hydrolase (yiza, bsu10800) from bacillus subtilis at 1.90 a resolution 0.7853 20 155
6iz2-assembly1.cif.gz_A crystal structure of dinb/yfit protein dr0053 from d. radiodurans r1 0.7671 19 159
ID Description Score Start End Superfamily
af_O53728_4_171_1.20.120.450 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.776 18 161 1.20.120.450
2qe9B01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7738 17 155 1.20.120.450
2hkvA01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7522 17 164 1.20.120.450
2hkvA01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7383 17 164 1.20.120.450
3di5A00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7273 19 164 1.20.120.450
ID Description Score Start End GO Terms
AF-A0A852VKW3-F1-model_v4 Putative damage-inducible protein DinB 0.9812 6 165
AF-A0A372IS77-F1-model_v4 DinB family protein 0.9588 1 165
AF-C1F1M3-F1-model_v4 DinB-like domain-containing protein 0.9543 1 166
AF-A0A7V2HHY7-F1-model_v4 DinB family protein 0.9523 6 166
AF-A0A4Q5QU83-F1-model_v4 DinB family protein 0.9515 49 168

Feature Viewer

pLDDT pTM Quality
92.49 0.87 High
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Predicted Structure (AlphaFold2)

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