F293343
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 190 | 151 | 140 | 576 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|3006425503|3006427107 |
| Length | 671 |
| Sequence | LVPAPARRPAAVPRAAVPMEVRMTRPAVRSLSLLTAVAAVLSLTAAAPPAAPRHPGAVPAAAGTAGPGTAPPVGAPPPKTPVAVGRGGAVSSVDADASAAGLEILRRGGNAVDAAVATAAALGVTEPYSAGVGGGGYFVHYDAKHRTVRTIDGRETAPRTADERLFLGEDGKPIPFDEAVTSGLSVGTPGTPATWDAALSAWGSKSLREVLRPAQRIARQGFTVDETFRQQTADNADRFRDFPASAELFLPGGEPPAVGSTLRNPDLARTYELLARGGGRALYQGELARDIVGTVRRPPVRAGAGRTPRPGDLTTADLRDYRTKRQASVATSYRGLDVHGMAPSSSGGTTVAEALNILESTGPRRTAGEHRTGAADGPRSAGGTARDGGAGHLHRLIEASRLAFADRGRWVGDPAFNDVPARELVSQRFADSRACLIREDAALTSPVAPGDPRNPAACGTSGAPAPTPYEGESTTHLTTADRWGNVVAYTLTIEQTGGSGITVPGRGFLLNNELTDFSFTPAAAGVPDPNLPGPGKRPRSSMSPTIVLDEQRRPVVALGSPGGSTIITTVLQTLTNHLDRGMPLADAIAAPRVSQRNTETTQMEPGLWDDPARQRLEALGHRFTRTPEIGAVTGVQRLPGGKWLAAAETERRGGGSAMALDGGAPGHGHGR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2554235227 | Arthrobacter sp. PAO19 | Isolate | Rhizosphere |
| 2 | 2558860112 | Pseudonocardia acaciae DSM 45401 | Isolate | Unclassified |
| 3 | 2558860280 | Kutzneria sp. 744 | Isolate | Unclassified |
| 4 | 2582580736 | Prauserella sp. Am3 | Isolate | Unclassified |
| 5 | 2622736626 | Micromonospora rhizosphaerae DSM 45431 | Isolate | Rhizosphere |
| 6 | 2643221631 | Kitasatospora sp. Root107 | Isolate | Unclassified |
| 7 | 2643221681 | Aeromicrobium sp. Root472D3 | Isolate | Unclassified |
| 8 | 2643221697 | Aeromicrobium sp. Root495 | Isolate | Unclassified |
| 9 | 2643221961 | Aeromicrobium sp. Root236 | Isolate | Unclassified |
| 10 | 2643221962 | Aeromicrobium sp. Root344 | Isolate | Unclassified |
| 11 | 2654587600 | Glutamicibacter halophytocola KLBMP5180 | Isolate | Unclassified |
| 12 | 2690315906 | Arthrobacter sp. OY3WO11 | Isolate | Unclassified |
| 13 | 2739367756 | Asticcacaulis sp. CF398 | Isolate | Unclassified |
| 14 | 2751185734 | Saccharothrix sp. NRRL B-16314 | Isolate | Rhizosphere |
| 15 | 2751185782 | Actinoplanes subtropicus NRRL B-24665 | Isolate | Rhizosphere |
| 16 | 2791355406 | Streptomyces rhizosphaericus NRRL B-24304 | Isolate | Unclassified |
| 17 | 2799112218 | Motilibacter rhizosphaerae DSM 45622 | Isolate | Rhizosphere |
| 18 | 2808606522 | Amycolatopsis sp. BJA-103 | Isolate | Unclassified |
| 19 | 2833709550 | Microbacterium sp. 3290 | Isolate | Rhizosphere |
| 20 | 2835188231 | Isoptericola variabilis JZ7 | Isolate | Unclassified |
| 21 | 2837268691 | Jiangella endophytica KE2-3 | Isolate | Rhizosphere |
| 22 | 2858868258 | Micromonospora sp. MH33 | Isolate | Unclassified |
| 23 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 24 | 2866612099 | Amycolatopsis suaedae 8-3EHSu | Isolate | Unclassified |
| 25 | 2867302475 | Micromonospora globbae WPS1-2 | Isolate | Unclassified |
| 26 | 2867312974 | Micromonospora musae NGC1-4 | Isolate | Unclassified |
| 27 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 28 | 2867369537 | Streptomyces sp. Z26 | Isolate | Unclassified |
| 29 | 2867475112 | Streptomyces sp. TM32 | Isolate | Unclassified |
| 30 | 2891326441 | Actinokineospora pegani TRM65233 | Isolate | Unclassified |
| 31 | 2902582711 | Micromonospora sp. AP08 | Isolate | Unclassified |
| 32 | 2912723979 | Streptomyces sp. NEAU-sy36 | Isolate | Rhizosphere |
| 33 | 2917736166 | Amycolatopsis dendrobii DR6-1 | Isolate | Unclassified |
| 34 | 2920879853 | Kocuria salina CV6 | Isolate | Unclassified |
| 35 | 2946024296 | Arthrobacter woluwensis W4I2 | Isolate | Rhizosphere |
| 36 | 2997451912 | Streptomyces piniterrae jys28 | Isolate | Rhizosphere |
| 37 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 38 | 3006321560 | Actinacidiphila epipremni PRB2-1 | Isolate | Unclassified |
| 39 | 3006425503 | Streptomyces zingiberis PLAI1-29 | Isolate | Unclassified |
| 40 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 41 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 42 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 43 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 44 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 45 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 46 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 47 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 48 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 49 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300015688 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 | Metagenome | Rhizosphere |
| 51 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 57 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 58 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 59 | 3300030733 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 | Metagenome | Rhizosphere |
| 60 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 61 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 62 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 63 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 64 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 65 | 3300031889 | Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO | Metagenome | Rhizosphere |
| 66 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 67 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 68 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 69 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 70 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 71 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 72 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 73 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 74 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 75 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 76 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 77 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 78 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 79 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 80 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 81 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 82 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 83 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 84 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 85 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 113 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 114 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 115 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 116 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 117 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 118 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 119 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 120 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 121 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 126 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 132 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 133 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 137 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 138 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 140 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 142 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 143 | 8025478263 | Streptomyces telluris AA8 | Isolate | Rhizosphere |
| 144 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 145 | 8047893842 | Streptomyces cangkringensis DSM 41769 | Isolate | Rhizosphere |
| 146 | 8048127548 | Streptomyces samsunensis DSM 42010 | Isolate | Rhizosphere |
| 147 | 8048356638 | Streptomyces rhizosphaericus DSM 41760 | Isolate | Rhizosphere |
| 148 | 8048369669 | Streptomyces indonesiensis DSM 41759 | Isolate | Rhizoplane |
| 149 | 8048379754 | Streptomyces asiaticus DSM 41761 | Isolate | Rhizosphere |
| 150 | 8056447290 | Streptomyces huiliensis SCA2-4 | Isolate | Rhizosphere |
| 151 | 8056667051 | Streptomyces sichuanensis SCA3-4 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 73.68 |
| Metatranscriptomes | 0 |
| Isolates | 26.32 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.21 |
| Nodule | 0 |
| Rhizoplane | 8.95 |
| Rhizosphere | 65.79 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 21.05 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25160J50197_1000544 | 3300003354 | Bacteria | 21428 |
| 2 | JGI25160J50197_1009364 | 3300003354 | Bacteria | 3639 |
| 3 | Ga0070668_100021035 | 3300005347 | Bacteria | 4930 |
| 4 | Ga0070668_100028294 | 3300005347 | Bacteria | 4255 |
| 5 | Ga0070710_10000061 | 3300005437 | Bacteria | 50295 |
| 6 | Ga0070710_10000391 | 3300005437 | Bacteria | 20454 |
| 7 | Ga0070663_100002513 | 3300005455 | Bacteria | 10349 |
| 8 | Ga0068858_100028632 | 3300005842 | Bacteria | 5173 |
| 9 | Ga0068860_100052064 | 3300005843 | Bacteria | 3894 |
| 10 | Ga0075363_100017755 | 3300006048 | Bacteria | 3534 |
| 11 | Ga0075364_10002655 | 3300006051 | Bacteria | 10039 |
| 12 | Ga0075432_10001937 | 3300006058 | Bacteria | 6870 |
| 13 | Ga0157369_10107202 | 3300013105 | Bacteria | 2972 |
| 14 | Ga0183367_1001 | 3300015688 | Bacteria | 1225545 |
| 15 | Ga0207426_1000396 | 3300025302 | Bacteria | 74072 |
| 16 | Ga0207426_1000741 | 3300025302 | Bacteria | 36954 |
| 17 | Ga0207426_1000749 | 3300025302 | Bacteria | 36538 |
| 18 | Ga0207692_10000563 | 3300025898 | Bacteria | 13201 |
| 19 | Ga0207661_10047350 | 3300025944 | Bacteria | 3413 |
| 20 | Ga0207668_10039407 | 3300025972 | Bacteria | 3180 |
| 21 | Ga0207678_10000171 | 3300026067 | Bacteria | 54729 |
| 22 | Ga0307515_10138785 | 3300028794 | Bacteria | 2622 |
| 23 | Ga0307511_10000236 | 3300030521 | Bacteria | 56511 |
| 24 | Ga0307512_10008090 | 3300030522 | Bacteria | 10300 |
| 25 | Ga0314311_1041007 | 3300030733 | Bacteria | 4669 |
| 26 | Ga0265340_10003379 | 3300031247 | Bacteria | 9016 |
| 27 | Ga0307509_10034650 | 3300031507 | Bacteria | 5545 |
| 28 | Ga0307509_10147232 | 3300031507 | Bacteria | 2278 |
| 29 | Ga0307508_10008331 | 3300031616 | Bacteria | 9585 |
| 30 | Ga0307413_10024925 | 3300031824 | Bacteria | 3269 |
| 31 | Ga0307410_10016427 | 3300031852 | Bacteria | 4415 |
| 32 | Ga0326468_10000436 | 3300031889 | Bacteria | 4461 |
| 33 | Ga0307407_10041855 | 3300031903 | Bacteria | 2564 |
| 34 | Ga0307412_10013932 | 3300031911 | Bacteria | 4729 |
| 35 | Ga0307409_100012765 | 3300031995 | Bacteria | 5368 |
| 36 | Ga0307416_100027291 | 3300032002 | Bacteria | 4225 |
| 37 | Ga0307416_100043988 | 3300032002 | Bacteria | 3502 |
| 38 | Ga0307415_100000889 | 3300032126 | Bacteria | 13671 |
| 39 | Ga0307507_10094173 | 3300033179 | Bacteria | 2548 |
| 40 | Ga0373935_0005448 | 3300035692 | Bacteria | 7498 |
| 41 | Ga0395898_0003231 | 3300037466 | Bacteria | 18309 |
| 42 | Ga0395898_0012475 | 3300037466 | Bacteria | 8786 |
| 43 | Ga0395905_0054414 | 3300037471 | Bacteria | 3746 |
| 44 | Ga0451797_0923831 | 3300041453 | Bacteria | 2318 |
| 45 | Ga0466969_0007782 | 3300044656 | Bacteria | 5695 |
| 46 | Ga0466972_0007000 | 3300044658 | Bacteria | 5657 |
| 47 | Ga0466965_0008859 | 3300044683 | Bacteria | 4665 |
| 48 | Ga0466965_0015851 | 3300044683 | Bacteria | 3580 |
| 49 | Ga0466966_0003208 | 3300044684 | Bacteria | 10775 |
| 50 | Ga0466966_0051753 | 3300044684 | Bacteria | 2610 |
| 51 | Ga0466968_0010225 | 3300044735 | Bacteria | 3633 |
| 52 | Ga0466970_0009363 | 3300044765 | Bacteria | 4949 |
| 53 | Ga0466957_0006318 | 3300044842 | Bacteria | 6683 |
| 54 | Ga0466960_0007067 | 3300044901 | Bacteria | 4538 |
| 55 | Ga0466960_0016674 | 3300044901 | Bacteria | 3191 |
| 56 | Ga0466960_0031413 | 3300044901 | Bacteria | 2450 |
| 57 | Ga0466967_0004176 | 3300045976 | Bacteria | 9667 |
| 58 | Ga0466967_0004558 | 3300045976 | Bacteria | 9382 |
| 59 | Ga0466967_0008839 | 3300045976 | Bacteria | 7426 |
| 60 | Ga0466967_0035004 | 3300045976 | Bacteria | 4269 |
| 61 | Ga0466967_0074053 | 3300045976 | Bacteria | 3057 |
| 62 | Ga0466967_0074542 | 3300045976 | Bacteria | 3048 |
| 63 | Ga0495592_0006288 | 3300046454 | Bacteria | 8837 |
| 64 | Ga0495603_0000165 | 3300046455 | Bacteria | 33518 |
| 65 | Ga0495603_0015616 | 3300046455 | Bacteria | 4595 |
| 66 | Ga0495629_0003056 | 3300046459 | Bacteria | 12717 |
| 67 | Ga0495629_0003371 | 3300046459 | Bacteria | 12072 |
| 68 | Ga0495653_0004140 | 3300046463 | Bacteria | 11731 |
| 69 | Ga0495580_0018753 | 3300046472 | Bacteria | 5149 |
| 70 | Ga0495662_0017029 | 3300046476 | Bacteria | 3517 |
| 71 | Ga0495664_0061172 | 3300046477 | Bacteria | 2242 |
| 72 | Ga0495594_0024185 | 3300046499 | Bacteria | 3260 |
| 73 | Ga0495608_0001864 | 3300046511 | Bacteria | 15063 |
| 74 | Ga0495632_0040426 | 3300046519 | Bacteria | 2349 |
| 75 | Ga0495652_0019191 | 3300046529 | Bacteria | 6090 |
| 76 | Ga0495640_0000900 | 3300046533 | Bacteria | 22857 |
| 77 | Ga0495645_0022322 | 3300046543 | Bacteria | 4578 |
| 78 | Ga0495645_0064285 | 3300046543 | Bacteria | 2655 |
| 79 | Ga0495645_0082000 | 3300046543 | Bacteria | 2313 |
| 80 | Ga0495633_0059369 | 3300046558 | Bacteria | 1794 |
| 81 | Ga0495667_0022046 | 3300046559 | Bacteria | 4293 |
| 82 | Ga0495634_0015239 | 3300046642 | Bacteria | 5527 |
| 83 | Ga0495634_0017481 | 3300046642 | Bacteria | 5116 |
| 84 | Ga0495588_0010129 | 3300046674 | Bacteria | 4374 |
| 85 | Ga0495657_0003287 | 3300046675 | Bacteria | 13263 |
| 86 | Ga0495657_0003401 | 3300046675 | Bacteria | 12999 |
| 87 | Ga0495599_0053422 | 3300046678 | Bacteria | 2530 |
| 88 | Ga0495613_0000735 | 3300046689 | Bacteria | 25686 |
| 89 | Ga0495613_0001527 | 3300046689 | Bacteria | 17619 |
| 90 | Ga0495613_0008637 | 3300046689 | Bacteria | 7558 |
| 91 | Ga0495581_0007174 | 3300047315 | Bacteria | 6453 |
| 92 | Ga0495636_0015759 | 3300047318 | Bacteria | 3013 |
| 93 | Ga0495676_0019322 | 3300047321 | Bacteria | 5994 |
| 94 | Ga0495676_0019680 | 3300047321 | Bacteria | 5934 |
| 95 | Ga0495675_0003853 | 3300047444 | Bacteria | 9086 |
| 96 | Ga0495675_0008315 | 3300047444 | Bacteria | 6420 |
| 97 | Ga0495675_0014561 | 3300047444 | Bacteria | 4971 |
| 98 | Ga0495685_004848 | 3300047447 | Bacteria | 4367 |
| 99 | Ga0495684_0034192 | 3300047471 | Bacteria | 3900 |
| 100 | Ga0495614_0006553 | 3300048089 | Bacteria | 5218 |
| 101 | Ga0496100_0038810 | 3300048903 | Bacteria | 3020 |
| 102 | Ga0496101_0036396 | 3300048904 | Bacteria | 3486 |
| 103 | Ga0496101_0064379 | 3300048904 | Bacteria | 2670 |
| 104 | Ga0496102_0003312 | 3300048905 | Bacteria | 13653 |
| 105 | Ga0496102_0020047 | 3300048905 | Bacteria | 5901 |
| 106 | Ga0496102_0074549 | 3300048905 | Bacteria | 3119 |
| 107 | Ga0496104_0166266 | 3300048907 | Bacteria | 2116 |
| 108 | Ga0496106_0000747 | 3300048909 | Bacteria | 23467 |
| 109 | Ga0496106_0029047 | 3300048909 | Bacteria | 4120 |
| 110 | Ga0496108_0112854 | 3300048911 | Bacteria | 2325 |
| 111 | Ga0496109_0001166 | 3300048912 | Bacteria | 21858 |
| 112 | Ga0496109_0123772 | 3300048912 | Bacteria | 2410 |
| 113 | Ga0496114_0008045 | 3300048917 | Bacteria | 8348 |
| 114 | Ga0496114_0015393 | 3300048917 | Bacteria | 6151 |
| 115 | Ga0496114_0043686 | 3300048917 | Bacteria | 3716 |
| 116 | Ga0496123_0028249 | 3300048926 | Bacteria | 4158 |
| 117 | Ga0501031_0010886 | 3300049568 | Bacteria | 5926 |
| 118 | Ga0501036_0009052 | 3300049572 | Bacteria | 8188 |
| 119 | Ga0501036_0117100 | 3300049572 | Bacteria | 2250 |
| 120 | Ga0501038_0086455 | 3300049574 | Bacteria | 2634 |
| 121 | Ga0501039_0003707 | 3300049575 | Bacteria | 11468 |
| 122 | Ga0501041_0007698 | 3300049577 | Bacteria | 6322 |
| 123 | Ga0501042_0025043 | 3300049578 | Bacteria | 4189 |
| 124 | Ga0501042_0034274 | 3300049578 | Bacteria | 3600 |
| 125 | Ga0501043_0013438 | 3300049579 | Bacteria | 6403 |
| 126 | Ga0501046_0096323 | 3300049580 | Bacteria | 2273 |
| 127 | Ga0501068_0016265 | 3300049584 | Bacteria | 4288 |
| 128 | Ga0501071_0016592 | 3300049587 | Bacteria | 5066 |
| 129 | Ga0501075_0011237 | 3300049591 | Bacteria | 6334 |
| 130 | Ga0501076_0006744 | 3300049592 | Bacteria | 8330 |
| 131 | Ga0501076_0062274 | 3300049592 | Bacteria | 2971 |
| 132 | Ga0501079_0051959 | 3300049741 | Bacteria | 3165 |
| 133 | Ga0501081_0112787 | 3300049743 | Bacteria | 1930 |
| 134 | Ga0501044_0086064 | 3300049823 | Bacteria | 3175 |
| 135 | Ga0501045_0053811 | 3300049824 | Bacteria | 2941 |
| 136 | nmdc:mga00v17_1011_c1 | 3300050491 | Bacteria | 15046 |
| 137 | Ga0495619_0027395 | 3300053085 | Bacteria | 3670 |
| 138 | Ga0501084_0004760 | 3300054114 | Bacteria | 11093 |
| 139 | Ga0501082_0033734 | 3300060353 | Bacteria | 4415 |
| 140 | Ga0530510_0031670 | 3300061734 | Bacteria | 3803 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300048912 | Ga0496109_0123772 | Ga0496109_0123772_925_2400 | 444 |
| 2 | 3300048907 | Ga0496104_0166266 | Ga0496104_0166266_299_1813 | 457 |
| 3 | 3300049743 | Ga0501081_0112787 | Ga0501081_0112787_232_1851 | 505 |
| 4 | 3300046455 | Ga0495603_0015616 | Ga0495603_0015616_1339_3156 | 523 |
| 5 | 3300046674 | Ga0495588_0010129 | Ga0495588_0010129_690_2507 | 523 |
| 6 | 3300047318 | Ga0495636_0015759 | Ga0495636_0015759_369_2186 | 523 |
| 7 | 3300047447 | Ga0495685_004848 | Ga0495685_004848_1736_3553 | 523 |
| 8 | 3300013105 | Ga0157369_10107202 | Ga0157369_101072022 | 529 |
| 9 | 3300048904 | Ga0496101_0064379 | Ga0496101_0064379_395_2245 | 530 |
| 10 | 3300048905 | Ga0496102_0020047 | Ga0496102_0020047_3795_5645 | 530 |
| 11 | 3300048909 | Ga0496106_0029047 | Ga0496106_0029047_662_2512 | 530 |
| 12 | 3300048911 | Ga0496108_0112854 | Ga0496108_0112854_71_1921 | 530 |
| 13 | 3300049578 | Ga0501042_0025043 | Ga0501042_0025043_634_2481 | 532 |
| 14 | 3300031616 | Ga0307508_10008331 | Ga0307508_100083316 | 534 |
| 15 | 3300048903 | Ga0496100_0038810 | Ga0496100_0038810_238_1926 | 534 |
| 16 | 3300048904 | Ga0496101_0036396 | Ga0496101_0036396_1335_3023 | 534 |
| 17 | 3300048905 | Ga0496102_0003312 | Ga0496102_0003312_4942_6630 | 534 |
| 18 | 3300048917 | Ga0496114_0008045 | Ga0496114_0008045_2816_4504 | 534 |
| 19 | 3300006058 | Ga0075432_10001937 | Ga0075432_100019375 | 535 |
| 20 | 3300031824 | Ga0307413_10024925 | Ga0307413_100249253 | 536 |
| 21 | 3300031903 | Ga0307407_10041855 | Ga0307407_100418551 | 536 |
| 22 | 3300032126 | Ga0307415_100000889 | Ga0307415_1000008893 | 536 |
| 23 | 3300049568 | Ga0501031_0010886 | Ga0501031_0010886_3891_5738 | 536 |
| 24 | 3300049572 | Ga0501036_0009052 | Ga0501036_0009052_2267_4114 | 536 |
| 25 | 3300049575 | Ga0501039_0003707 | Ga0501039_0003707_5691_7538 | 536 |
| 26 | 3300049580 | Ga0501046_0096323 | Ga0501046_0096323_265_2112 | 536 |
| 27 | 3300049587 | Ga0501071_0016592 | Ga0501071_0016592_298_2145 | 536 |
| 28 | 3300049592 | Ga0501076_0006744 | Ga0501076_0006744_429_2276 | 536 |
| 29 | 3300054114 | Ga0501084_0004760 | Ga0501084_0004760_1578_3425 | 536 |
| 30 | 3300005455 | Ga0070663_100002513 | Ga0070663_1000025132 | 537 |
| 31 | 3300026067 | Ga0207678_10000171 | Ga0207678_1000017146 | 537 |
| 32 | 3300031247 | Ga0265340_10003379 | Ga0265340_100033795 | 537 |
| 33 | 3300046499 | Ga0495594_0024185 | Ga0495594_0024185_257_1909 | 537 |
| 34 | iso_pu_bacteria | 2739367756 | 2739790321 | 537 |
| 35 | 3300048905 | Ga0496102_0074549 | Ga0496102_0074549_750_2435 | 538 |
| 36 | 3300048917 | Ga0496114_0015393 | Ga0496114_0015393_1586_3271 | 538 |
| 37 | iso_pu_bacteria | 2946024296 | 2946027046 | 538 |
| 38 | 3300046543 | Ga0495645_0064285 | Ga0495645_0064285_611_2452 | 539 |
| 39 | 3300046678 | Ga0495599_0053422 | Ga0495599_0053422_619_2460 | 539 |
| 40 | 3300035692 | Ga0373935_0005448 | Ga0373935_0005448_3071_4771 | 540 |
| 41 | 3300044656 | Ga0466969_0007782 | Ga0466969_0007782_2541_4340 | 540 |
| 42 | 3300044684 | Ga0466966_0051753 | Ga0466966_0051753_229_2028 | 540 |
| 43 | 3300046558 | Ga0495633_0059369 | Ga0495633_0059369_12_1673 | 540 |
| 44 | 3300048909 | Ga0496106_0000747 | Ga0496106_0000747_8364_10040 | 540 |
| 45 | 3300031889 | Ga0326468_10000436 | Ga0326468_100004363 | 541 |
| 46 | 3300046459 | Ga0495629_0003371 | Ga0495629_0003371_3275_5101 | 544 |
| 47 | 3300047321 | Ga0495676_0019322 | Ga0495676_0019322_4084_5760 | 544 |
| 48 | 3300049584 | Ga0501068_0016265 | Ga0501068_0016265_1375_3213 | 544 |
| 49 | 3300015688 | Ga0183367_1001 | Ga0183367_1001486 | 545 |
| 50 | 3300025944 | Ga0207661_10047350 | Ga0207661_100473502 | 545 |
| 51 | 3300046455 | Ga0495603_0000165 | Ga0495603_0000165_25520_27196 | 545 |
| 52 | 3300046459 | Ga0495629_0003056 | Ga0495629_0003056_5432_7108 | 545 |
| 53 | 3300046463 | Ga0495653_0004140 | Ga0495653_0004140_1678_3519 | 545 |
| 54 | 3300046472 | Ga0495580_0018753 | Ga0495580_0018753_2978_4819 | 545 |
| 55 | 3300046476 | Ga0495662_0017029 | Ga0495662_0017029_186_2027 | 545 |
| 56 | 3300046477 | Ga0495664_0061172 | Ga0495664_0061172_198_2039 | 545 |
| 57 | 3300046511 | Ga0495608_0001864 | Ga0495608_0001864_4896_6737 | 545 |
| 58 | 3300046519 | Ga0495632_0040426 | Ga0495632_0040426_178_1959 | 545 |
| 59 | 3300046559 | Ga0495667_0022046 | Ga0495667_0022046_2376_4217 | 545 |
| 60 | 3300046642 | Ga0495634_0015239 | Ga0495634_0015239_1311_3152 | 545 |
| 61 | 3300046675 | Ga0495657_0003287 | Ga0495657_0003287_5532_7373 | 545 |
| 62 | 3300046689 | Ga0495613_0000735 | Ga0495613_0000735_5514_7190 | 545 |
| 63 | 3300046689 | Ga0495613_0001527 | Ga0495613_0001527_4924_6765 | 545 |
| 64 | 3300047315 | Ga0495581_0007174 | Ga0495581_0007174_3663_5504 | 545 |
| 65 | 3300047444 | Ga0495675_0008315 | Ga0495675_0008315_2598_4385 | 545 |
| 66 | 3300047444 | Ga0495675_0014561 | Ga0495675_0014561_2248_4089 | 545 |
| 67 | 3300047471 | Ga0495684_0034192 | Ga0495684_0034192_1751_3592 | 545 |
| 68 | 3300048089 | Ga0495614_0006553 | Ga0495614_0006553_3530_5206 | 545 |
| 69 | 3300053085 | Ga0495619_0027395 | Ga0495619_0027395_1062_2903 | 545 |
| 70 | 3300030522 | Ga0307512_10008090 | Ga0307512_100080902 | 546 |
| 71 | 3300044658 | Ga0466972_0007000 | Ga0466972_0007000_3999_5645 | 547 |
| 72 | 3300049577 | Ga0501041_0007698 | Ga0501041_0007698_2867_4672 | 548 |
| 73 | 3300049578 | Ga0501042_0034274 | Ga0501042_0034274_1597_3402 | 548 |
| 74 | 3300049591 | Ga0501075_0011237 | Ga0501075_0011237_3039_4844 | 548 |
| 75 | 3300049824 | Ga0501045_0053811 | Ga0501045_0053811_457_2262 | 548 |
| 76 | 3300060353 | Ga0501082_0033734 | Ga0501082_0033734_1366_3171 | 548 |
| 77 | 3300061734 | Ga0530510_0031670 | Ga0530510_0031670_1352_3157 | 548 |
| 78 | 3300031507 | Ga0307509_10147232 | Ga0307509_101472322 | 550 |
| 79 | 3300006048 | Ga0075363_100017755 | Ga0075363_1000177552 | 551 |
| 80 | 3300046454 | Ga0495592_0006288 | Ga0495592_0006288_6158_8005 | 551 |
| 81 | 3300046529 | Ga0495652_0019191 | Ga0495652_0019191_1450_3297 | 551 |
| 82 | 3300046533 | Ga0495640_0000900 | Ga0495640_0000900_3408_5255 | 551 |
| 83 | 3300046675 | Ga0495657_0003401 | Ga0495657_0003401_7466_9313 | 551 |
| 84 | 3300046689 | Ga0495613_0008637 | Ga0495613_0008637_614_2461 | 551 |
| 85 | 3300047321 | Ga0495676_0019680 | Ga0495676_0019680_459_2306 | 551 |
| 86 | 3300046543 | Ga0495645_0022322 | Ga0495645_0022322_1094_2983 | 552 |
| 87 | 3300033179 | Ga0307507_10094173 | Ga0307507_100941732 | 553 |
| 88 | 3300031852 | Ga0307410_10016427 | Ga0307410_100164273 | 554 |
| 89 | 3300032002 | Ga0307416_100043988 | Ga0307416_1000439883 | 554 |
| 90 | 3300046543 | Ga0495645_0082000 | Ga0495645_0082000_305_2092 | 555 |
| 91 | 3300047444 | Ga0495675_0003853 | Ga0495675_0003853_7229_9016 | 555 |
| 92 | 3300031995 | Ga0307409_100012765 | Ga0307409_1000127654 | 556 |
| 93 | 3300032002 | Ga0307416_100027291 | Ga0307416_1000272912 | 556 |
| 94 | 3300044765 | Ga0466970_0009363 | Ga0466970_0009363_1365_3221 | 559 |
| 95 | 3300046642 | Ga0495634_0017481 | Ga0495634_0017481_2467_4248 | 559 |
| 96 | 3300049592 | Ga0501076_0062274 | Ga0501076_0062274_970_2796 | 560 |
| 97 | 3300041453 | Ga0451797_0923831 | Ga0451797_0923831_167_1990 | 562 |
| 98 | 3300048926 | Ga0496123_0028249 | Ga0496123_0028249_2139_4004 | 563 |
| 99 | 3300044684 | Ga0466966_0003208 | Ga0466966_0003208_8623_10407 | 564 |
| 100 | 3300045976 | Ga0466967_0074053 | Ga0466967_0074053_985_2766 | 564 |
| 101 | 3300030521 | Ga0307511_10000236 | Ga0307511_1000023619 | 566 |
| 102 | 3300028794 | Ga0307515_10138785 | Ga0307515_101387852 | 567 |
| 103 | 3300037466 | Ga0395898_0012475 | Ga0395898_0012475_2808_4649 | 567 |
| 104 | 3300037471 | Ga0395905_0054414 | Ga0395905_0054414_1517_3358 | 567 |
| 105 | 3300045976 | Ga0466967_0008839 | Ga0466967_0008839_3871_5670 | 568 |
| 106 | 3300045976 | Ga0466967_0035004 | Ga0466967_0035004_698_2503 | 568 |
| 107 | 3300049572 | Ga0501036_0117100 | Ga0501036_0117100_140_1933 | 568 |
| 108 | 3300049823 | Ga0501044_0086064 | Ga0501044_0086064_40_1833 | 568 |
| 109 | 3300049574 | Ga0501038_0086455 | Ga0501038_0086455_717_2510 | 569 |
| 110 | 3300045976 | Ga0466967_0004176 | Ga0466967_0004176_2916_4748 | 570 |
| 111 | 3300045976 | Ga0466967_0004558 | Ga0466967_0004558_4059_5891 | 571 |
| 112 | 3300049579 | Ga0501043_0013438 | Ga0501043_0013438_4517_6364 | 571 |
| 113 | 3300049741 | Ga0501079_0051959 | Ga0501079_0051959_924_2771 | 571 |
| 114 | 3300031911 | Ga0307412_10013932 | Ga0307412_100139325 | 572 |
| 115 | iso_pu_bacteria | 2799112218 | 2799183314 | 574 |
| 116 | iso_pu_bacteria | 2866612099 | 2866614516 | 574 |
| 117 | 3300048912 | Ga0496109_0001166 | Ga0496109_0001166_19166_21112 | 575 |
| 118 | 3300044842 | Ga0466957_0006318 | Ga0466957_0006318_3040_4857 | 576 |
| 119 | 3300045976 | Ga0466967_0074542 | Ga0466967_0074542_1046_2863 | 576 |
| 120 | iso_pu_bacteria | 2751185782 | 2753267581 | 576 |
| 121 | 3300048917 | Ga0496114_0043686 | Ga0496114_0043686_114_1949 | 577 |
| 122 | 3300005347 | Ga0070668_100021035 | Ga0070668_1000210351 | 578 |
| 123 | 3300005842 | Ga0068858_100028632 | Ga0068858_1000286322 | 578 |
| 124 | 3300005843 | Ga0068860_100052064 | Ga0068860_1000520643 | 578 |
| 125 | 3300006051 | Ga0075364_10002655 | Ga0075364_100026557 | 578 |
| 126 | 3300025972 | Ga0207668_10039407 | Ga0207668_100394072 | 578 |
| 127 | 3300031507 | Ga0307509_10034650 | Ga0307509_100346502 | 578 |
| 128 | 3300050491 | nmdc:mga00v17_1011_c1 | nmdc:mga00v17_1011_c1_9603_11453 | 578 |
| 129 | iso_pu_bacteria | 2622736626 | 2623589859 | 578 |
| 130 | iso_pu_bacteria | 2751185734 | 2753073942 | 579 |
| 131 | iso_pu_bacteria | 2867302475 | 2867305683 | 579 |
| 132 | 3300005347 | Ga0070668_100028294 | Ga0070668_1000282943 | 580 |
| 133 | 3300005437 | Ga0070710_10000061 | Ga0070710_1000006111 | 580 |
| 134 | 3300025898 | Ga0207692_10000563 | Ga0207692_1000056311 | 580 |
| 135 | 3300030733 | Ga0314311_1041007 | Ga0314311_10410073 | 580 |
| 136 | 3300044683 | Ga0466965_0008859 | Ga0466965_0008859_2317_4086 | 580 |
| 137 | 3300044735 | Ga0466968_0010225 | Ga0466968_0010225_1847_3616 | 580 |
| 138 | 3300044901 | Ga0466960_0007067 | Ga0466960_0007067_1938_3707 | 580 |
| 139 | iso_pu_bacteria | 2643221631 | 2644180550 | 580 |
| 140 | iso_pu_bacteria | 2643221961 | 2645722681 | 580 |
| 141 | iso_pu_bacteria | 2643221962 | 2645725641 | 580 |
| 142 | iso_pu_bacteria | 2808606522 | 2809588505 | 580 |
| 143 | iso_pu_bacteria | 2858868258 | 2858875576 | 580 |
| 144 | iso_pu_bacteria | 2902582711 | 2902585363 | 580 |
| 145 | iso_pu_bacteria | 2917736166 | 2917741341 | 580 |
| 146 | iso_pu_bacteria | 8003314358 | 8003323914 | 580 |
| 147 | 3300005437 | Ga0070710_10000391 | Ga0070710_100003913 | 581 |
| 148 | 3300044683 | Ga0466965_0015851 | Ga0466965_0015851_112_1884 | 581 |
| 149 | 3300044901 | Ga0466960_0031413 | Ga0466960_0031413_230_2002 | 581 |
| 150 | iso_pu_bacteria | 2837268691 | 2837273046 | 581 |
| 151 | iso_pu_bacteria | 2867312974 | 2867314987 | 581 |
| 152 | iso_pu_bacteria | 2867319477 | 2867320016 | 581 |
| 153 | iso_pu_bacteria | 2891326441 | 2891332139 | 581 |
| 154 | iso_pu_bacteria | 2920879853 | 2920881253 | 581 |
| 155 | iso_pu_bacteria | 3006321560 | 3006328382 | 581 |
| 156 | iso_pu_bacteria | 2558860112 | 2558906282 | 582 |
| 157 | iso_pu_bacteria | 2643221697 | 2644536712 | 582 |
| 158 | iso_pu_bacteria | 8047710418 | 8047716855 | 582 |
| 159 | 3300003354 | JGI25160J50197_1009364 | JGI25160J50197_10093641 | 583 |
| 160 | 3300025302 | Ga0207426_1000741 | Ga0207426_100074126 | 583 |
| 161 | 3300037466 | Ga0395898_0003231 | Ga0395898_0003231_5524_7329 | 583 |
| 162 | iso_pu_bacteria | 2554235227 | 2555230138 | 583 |
| 163 | iso_pu_bacteria | 2643221681 | 2644457804 | 583 |
| 164 | iso_pu_bacteria | 2654587600 | 2655031164 | 583 |
| 165 | iso_pu_bacteria | 2690315906 | 2691511825 | 583 |
| 166 | iso_pu_bacteria | 2582580736 | 2583150789 | 584 |
| 167 | iso_pu_bacteria | 2866552031 | 2866556823 | 584 |
| 168 | iso_pu_bacteria | 8025478263 | 8025479413 | 584 |
| 169 | iso_pu_bacteria | 2835188231 | 2835189639 | 585 |
| 170 | iso_pu_bacteria | 2835188231 | 2835189647 | 585 |
| 171 | iso_pu_bacteria | 8056667051 | 8056667230 | 585 |
| 172 | iso_pu_bacteria | 2791355406 | 2793984243 | 586 |
| 173 | iso_pu_bacteria | 2833709550 | 2833711255 | 586 |
| 174 | iso_pu_bacteria | 2867369537 | 2867374609 | 586 |
| 175 | iso_pu_bacteria | 2997600082 | 2997603473 | 586 |
| 176 | iso_pu_bacteria | 8047893842 | 8047895350 | 586 |
| 177 | iso_pu_bacteria | 8048127548 | 8048130638 | 586 |
| 178 | iso_pu_bacteria | 8048356638 | 8048363604 | 586 |
| 179 | iso_pu_bacteria | 8048369669 | 8048372376 | 586 |
| 180 | iso_pu_bacteria | 8048379754 | 8048381310 | 586 |
| 181 | iso_pu_bacteria | 8056447290 | 8056448916 | 586 |
| 182 | iso_pu_bacteria | 3006425503 | 3006427107 | 587 |
| 183 | iso_pu_bacteria | 2558860280 | 2559431608 | 590 |
| 184 | 3300025302 | Ga0207426_1000396 | Ga0207426_10003969 | 596 |
| 185 | iso_pu_bacteria | 2912723979 | 2912728160 | 596 |
| 186 | 3300003354 | JGI25160J50197_1000544 | JGI25160J50197_100054420 | 597 |
| 187 | 3300025302 | Ga0207426_1000749 | Ga0207426_100074920 | 597 |
| 188 | 3300044901 | Ga0466960_0016674 | Ga0466960_0016674_1279_3129 | 597 |
| 189 | iso_pu_bacteria | 2867475112 | 2867475880 | 597 |
| 190 | iso_pu_bacteria | 2997451912 | 2997455105 | 597 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7d9x-assembly1.cif.gz_A | highly active mutant w525d of gamma-glutamyltranspeptidase from pseudomonas nitroreducens | 0.9336 | 38 | 368 |
| 2nqo-assembly1.cif.gz_C | crystal structure of helicobacter pylori gamma-glutamyltranspeptidase | 0.9315 | 38 | 367 |
| 3a75-assembly2.cif.gz_C | crystal structure of glutamate complex of halotolerant γ-glutamyltranspeptidase from bacillus subtilis | 0.93 | 38 | 392 |
| 4y23-assembly1.cif.gz_A | crystal structure of t399a precursor mutant protein of gamma-glutamyl transpeptidase from bacillus licheniformis | 0.9298 | 24 | 593 |
| 2v36-assembly1.cif.gz_A | crystal structure of gamma-glutamyl transferase from bacillus subtilis | 0.9288 | 38 | 392 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3fnmA02 | Mainly Alpha;Orthogonal Bundle;Serum Albumin; Chain A, Domain 1;Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.9357 | 273 | 367 | 1.10.246.130 |
| af_Q2G1F4_245_350_1.10.246.130 | Mainly Alpha;Orthogonal Bundle;Serum Albumin; Chain A, Domain 1;Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.9269 | 273 | 367 | 1.10.246.130 |
| af_F6NP25_426_607_3.60.20.40 | Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Gamma-glutamyltranspeptidase, small (S) subunit | 0.9205 | 393 | 580 | 3.60.20.40 |
| 2dbwC02 | Mainly Alpha;Orthogonal Bundle;Serum Albumin; Chain A, Domain 1;Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain | 0.9146 | 273 | 375 | 1.10.246.130 |
| af_Q2G1F4_365_544_3.60.20.40 | Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Gamma-glutamyltranspeptidase, small (S) subunit | 0.9097 | 400 | 589 | 3.60.20.40 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A0L8QNF5-F1-model_v4 | deleted | 0.9908 | 57 | 320 |
|
| AF-A0A3N6EPQ2-F1-model_v4 | deleted | 0.9882 | 169 | 594 |
|
| AF-A0A6B2SUQ9-F1-model_v4 | Glutathione hydrolase proenzyme (EC 2.3.2.2) (EC 3.4.19.13) [Cleaved into: Glutathione hydrolase large chain; Glutathione hydrolase small chain] | 0.9869 | 36 | 594 |
GO:0006750
GO:0006751 GO:0036374 GO:0103068 |
| AF-A0A3N6EPQ2-F1-model_v4 | deleted | 0.9835 | 169 | 594 |
|
| AF-A0A6B2SUQ9-F1-model_v4 | Glutathione hydrolase proenzyme (EC 2.3.2.2) (EC 3.4.19.13) [Cleaved into: Glutathione hydrolase large chain; Glutathione hydrolase small chain] | 0.9834 | 36 | 594 |
GO:0006750
GO:0006751 GO:0036374 GO:0103068 |
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar