F293215

General Info

Members Datasets Scaffolds Average Seq Length
190 126 380 818

Family's Representative Sequence

Representative Sequence 3300050515|nmdc:mga0a205_27616_c1|nmdc:mga0a205_27616_c1_1111_3858
Length 915
Sequence MRSKLFYRALLHLLPAAARRRDGSALEEAFEACLERERDRLGARGFLYAWINVIADTLQAAVALRLDARRRGRIREFATHDETHGDSTMSLFWQDVRYSLRILTRAPMFSATVVATLALAIGATTAVFSVVNTVLLRSLPFAEPDRLVVVYEQIGNMSPGGFSPPDFKAMEQRAQSFSGMGAYGTLEYELSGVQQPERVTAARVSAALFGVLGVTPAVGQAFTPEDDEGLRPVVILSDGLWRRAFGADPGVLGKAVQLDRRTYTVVGVMPRSFVFPNRGATINNVPAALFVPMSFTPRELSGFGSMYNKSVIARLKPSVSIAQASAEVRTIVTGLVPSIYPAQLQEMKGVLSGSAASLRDETVANVKRILYILFAAVGVVLLIACADVANLMLTRGVARGREIAVRSALGAGRMQVVRQVLVESTLLAIVGGVLGVVLAVWATSMLQRFVPANIPRLHELSLDINVLAFALVTSVGTAMMCGLLPALELSRRPSSEALKDGSRASTPGTRQRRLFGVLVAGQFAFAVVLLVAGGLLVRSFVRLMAVNPGFRAEHVLRFDTSLPSSAYARGSDIRLFYEQLLERMDRLPGTVASAGSVFLPLATTERRAFTIEAQPPASSDVAHVVASDWVQGRYFETLGATLRRGRYLTAEDTAASERVVVINETMAKQFWPGLDPVGQRIAWGSPQNHAPWMRIIGIIADVKQGGLDTKTVAQTYLPWVQVVPDSATSAAVFVGLRSLKIIVRTDADPMTMASSVQAQVRSLDPSLPVPQVQTMDAFVRESAAPQRFNTVLLGGFAGVALLLAAIGIGGVLATTVSTRTQEIGLRMALGANRGHVVRMIVRQGLMLVLAGLAIGLPLSALATRSMSSLLFDTGVGDPLTFAGAIALLLFVAAIACYIPARRATRVDPLVALRWE

Samples

Sample ID Description Type Environment
1 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
49 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
66 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
87 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
88 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
89 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
90 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
91 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
92 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
93 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
94 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
99 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
100 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
101 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
102 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
103 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
104 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
107 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
110 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
113 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
114 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
115 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
116 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
122 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
123 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
124 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
125 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
126 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.58
Nodule 0
Rhizoplane 2.11
Rhizosphere 93.68
Stem 0
Stem Tuber 0
Unclassified 7.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0a205_27616_c1 3300050515 Bacteria 5420
2 JGI24751J29686_10001897 3300002459 Bacteria 4272
3 Ga0065704_10080838 3300005289 Bacteria 3871
4 Ga0065712_10087550 3300005290 Bacteria 2570
5 Ga0065715_10002427 3300005293 Bacteria 4932
6 Ga0070683_100027669 3300005329 Bacteria 5116
7 Ga0070666_10041965 3300005335 Bacteria 3059
8 Ga0070680_100000666 3300005336 Bacteria 23831
9 Ga0070669_100009517 3300005353 Bacteria 6919
10 Ga0070671_100039842 3300005355 Bacteria 3900
11 Ga0070667_100009253 3300005367 Bacteria 8161
12 Ga0070703_10005491 3300005406 Unclassified 3547
13 Ga0070713_100003385 3300005436 Bacteria 10532
14 Ga0070705_100000017 3300005440 Bacteria 88714
15 Ga0070700_100032011 3300005441 Bacteria 3158
16 Ga0070700_100037639 3300005441 Bacteria 2944
17 Ga0070694_100002390 3300005444 Bacteria 11098
18 Ga0070694_100015400 3300005444 Bacteria 4803
19 Ga0070694_100028222 3300005444 Bacteria 3650
20 Ga0070708_100002346 3300005445 Bacteria 14659
21 Ga0070708_100009519 3300005445 Bacteria 7835
22 Ga0070708_100076478 3300005445 Bacteria 3023
23 Ga0070678_100062606 3300005456 Unclassified 2748
24 Ga0070681_10000136 3300005458 Bacteria 56009
25 Ga0070706_100038230 3300005467 Unclassified 4430
26 Ga0070707_100000056 3300005468 Bacteria 99729
27 Ga0070698_100012641 3300005471 Bacteria 8939
28 Ga0070699_100000049 3300005518 Bacteria 117880
29 Ga0070679_100002136 3300005530 Bacteria 17819
30 Ga0070697_100004073 3300005536 Bacteria 11208
31 Ga0070672_100056215 3300005543 Bacteria 3085
32 Ga0070695_100029535 3300005545 Bacteria 3406
33 Ga0070696_100000224 3300005546 Bacteria 34117
34 Ga0070696_100005653 3300005546 Bacteria 8356
35 Ga0070696_100008827 3300005546 Bacteria 6742
36 Ga0070693_100000107 3300005547 Bacteria 37349
37 Ga0070693_100017182 3300005547 Unclassified 3756
38 Ga0070665_100059155 3300005548 Unclassified 3841
39 Ga0070665_100122721 3300005548 Bacteria 2600
40 Ga0070704_100047203 3300005549 Bacteria 3009
41 Ga0068856_100011640 3300005614 Bacteria 8532
42 Ga0068864_100016349 3300005618 Bacteria 6176
43 Ga0068864_100020081 3300005618 Bacteria 5587
44 Ga0068866_10012705 3300005718 Bacteria 3674
45 Ga0068861_100031500 3300005719 Bacteria 3896
46 Ga0068863_100043841 3300005841 Bacteria 4247
47 Ga0068860_100008312 3300005843 Bacteria 10330
48 Ga0068862_100040007 3300005844 Bacteria 3984
49 Ga0081455_10003410 3300005937 Bacteria 18278
50 Ga0081455_10036783 3300005937 Bacteria 4354
51 Ga0081539_10000490 3300005985 Bacteria 83577
52 Ga0081539_10001950 3300005985 Bacteria 31553
53 Ga0081539_10004366 3300005985 Bacteria 15755
54 Ga0070717_10021694 3300006028 Bacteria 5065
55 Ga0070717_10029534 3300006028 Bacteria 4399
56 Ga0070717_10035371 3300006028 Bacteria 4043
57 Ga0075365_10037843 3300006038 Bacteria 3133
58 Ga0075367_10005688 3300006178 Bacteria 6223
59 Ga0097621_100002350 3300006237 Bacteria 12969
60 Ga0097621_100005605 3300006237 Bacteria 8853
61 Ga0075428_100002820 3300006844 Bacteria 18923
62 Ga0075428_100068179 3300006844 Bacteria 3892
63 Ga0075428_100069612 3300006844 Bacteria 3847
64 Ga0075428_100127632 3300006844 Bacteria 2767
65 Ga0075430_100021202 3300006846 Bacteria 5525
66 Ga0075431_100003321 3300006847 Bacteria 15583
67 Ga0075431_100011654 3300006847 Bacteria 8870
68 Ga0075431_100037207 3300006847 Bacteria 5016
69 Ga0075433_10098464 3300006852 Unclassified 2589
70 Ga0075434_100001285 3300006871 Bacteria 20928
71 Ga0075434_100006438 3300006871 Bacteria 10759
72 Ga0105240_10002652 3300009093 Bacteria 28480
73 Ga0105240_10003530 3300009093 Bacteria 24260
74 Ga0111539_10017408 3300009094 Bacteria 8896
75 Ga0111539_10030762 3300009094 Bacteria 6525
76 Ga0111539_10054904 3300009094 Bacteria 4737
77 Ga0114129_10000688 3300009147 Bacteria 42747
78 Ga0114129_10000783 3300009147 Bacteria 40711
79 Ga0114129_10005587 3300009147 Bacteria 17790
80 Ga0114129_10006729 3300009147 Bacteria 16320
81 Ga0114129_10039689 3300009147 Bacteria 6638
82 Ga0114129_10055311 3300009147 Bacteria 5562
83 Ga0105243_10066404 3300009148 Bacteria 2901
84 Ga0105242_10029220 3300009176 Bacteria 4394
85 Ga0105248_10002243 3300009177 Bacteria 21385
86 Ga0105237_10024638 3300009545 Bacteria 6153
87 Ga0105249_10033124 3300009553 Unclassified 4677
88 Ga0105249_10070290 3300009553 Bacteria 3231
89 Ga0157369_10061138 3300013105 Unclassified 4062
90 Ga0157374_10009513 3300013296 Bacteria 8345
91 Ga0157378_10044227 3300013297 Bacteria 3954
92 Ga0163162_10003347 3300013306 Bacteria 15326
93 Ga0163163_10000028 3300014325 Bacteria 176878
94 Ga0163163_10005717 3300014325 Bacteria 10784
95 Ga0157380_10007815 3300014326 Bacteria 7611
96 Ga0157380_10010567 3300014326 Bacteria 6640
97 Ga0157376_10024335 3300014969 Bacteria 4751
98 Ga0213875_10001357 3300021388 Bacteria 16102
99 Ga0207653_10002459 3300025885 Bacteria 5886
100 Ga0207684_10021964 3300025910 Bacteria 5450
101 Ga0207684_10031088 3300025910 Unclassified 4544
102 Ga0207707_10000003 3300025912 Bacteria 642592
103 Ga0207707_10058855 3300025912 Bacteria 3344
104 Ga0207695_10014330 3300025913 Bacteria 9401
105 Ga0207695_10087352 3300025913 Bacteria 3141
106 Ga0207660_10003852 3300025917 Bacteria 9778
107 Ga0207652_10000324 3300025921 Bacteria 49530
108 Ga0207646_10001239 3300025922 Bacteria 32007
109 Ga0207681_10019119 3300025923 Unclassified 4325
110 Ga0207686_10023562 3300025934 Bacteria 3557
111 Ga0207689_10041746 3300025942 Bacteria 3795
112 Ga0207708_10016130 3300026075 Bacteria 5612
113 Ga0207702_10020970 3300026078 Bacteria 5407
114 Ga0207648_10062275 3300026089 Unclassified 3252
115 Ga0207675_100018945 3300026118 Bacteria 6425
116 Ga0207675_100023468 3300026118 Bacteria 5739
117 Ga0207683_10031806 3300026121 Bacteria 4581
118 Ga0207428_10007062 3300027907 Bacteria 10282
119 Ga0207428_10009902 3300027907 Bacteria 8536
120 Ga0268266_10001510 3300028379 Bacteria 27433
121 Ga0307413_10021462 3300031824 Bacteria 3459
122 Ga0307409_100008262 3300031995 Bacteria 6305
123 Ga0307409_100022198 3300031995 Bacteria 4369
124 Ga0307416_100054009 3300032002 Bacteria 3227
125 Ga0307414_10022385 3300032004 Bacteria 3985
126 Ga0307415_100002321 3300032126 Bacteria 9451
127 Ga0373934_0001816 3300035086 Bacteria 7841
128 Ga0373954_0001855 3300035118 Bacteria 8729
129 Ga0373956_0000656 3300035119 Bacteria 14220
130 Ga0373956_0019526 3300035119 Bacteria 2875
131 Ga0373957_0000725 3300035120 Bacteria 8567
132 Ga0373957_0004040 3300035120 Bacteria 4420
133 Ga0373955_0001852 3300035172 Bacteria 9102
134 Ga0373955_0009067 3300035172 Bacteria 4647
135 Ga0373961_0000416 3300035241 Bacteria 17753
136 Ga0373933_0000375 3300035724 Bacteria 28675
137 Ga0373933_0000941 3300035724 Bacteria 17741
138 Ga0373937_0000082 3300036401 Bacteria 87971
139 Ga0373937_0000083 3300036401 Bacteria 87777
140 Ga0373937_0022926 3300036401 Bacteria 5614
141 Ga0436364_0410702 3300037853 Bacteria 8596
142 Ga0436364_0872914 3300037853 Bacteria 5034
143 Ga0436364_1250074 3300037853 Bacteria 18019
144 Ga0436365_0897072 3300039437 Bacteria 3626
145 Ga0495638_0010881 3300046460 Bacteria 6292
146 Ga0495638_0046171 3300046460 Bacteria 2737
147 Ga0495651_0037058 3300046462 Bacteria 3796
148 Ga0495653_0062011 3300046463 Bacteria 2827
149 Ga0495580_0012931 3300046472 Bacteria 6391
150 Ga0495582_0000405 3300046473 Bacteria 23553
151 Ga0495667_0032189 3300046559 Bacteria 3517
152 Ga0495635_0039527 3300046663 Bacteria 3263
153 Ga0495604_0007722 3300047317 Bacteria 8519
154 Ga0495680_0050232 3300047322 Bacteria 3262
155 Ga0495602_0010027 3300048088 Bacteria 9833
156 Ga0496104_0088042 3300048907 Bacteria 2966
157 Ga0496109_0000231 3300048912 Bacteria 54570
158 Ga0496112_0103809 3300048915 Bacteria 2813
159 Ga0496114_0000038 3300048917 Bacteria 139215
160 Ga0501071_0011525 3300049587 Bacteria 5963
161 Ga0501075_0000609 3300049591 Bacteria 21866
162 Ga0501075_0005170 3300049591 Bacteria 8930
163 Ga0501077_0000152 3300049593 Bacteria 38627
164 Ga0501077_0001818 3300049593 Bacteria 12897
165 Ga0501080_0004901 3300049742 Bacteria 11927
166 Ga0501080_0043936 3300049742 Bacteria 4160
167 Ga0501045_0062507 3300049824 Bacteria 2732
168 nmdc:mga05p37_11678_c1 3300050507 Bacteria 5425
169 nmdc:mga05p37_116_c1 3300050507 Bacteria 48738
170 nmdc:mga05p37_12126_c1 3300050507 Bacteria 10293
171 nmdc:mga05p37_1288_c1 3300050507 Bacteria 29118
172 nmdc:mga05p37_30880_c1 3300050507 Bacteria 4656
173 nmdc:mga05p37_46924_c1 3300050507 Bacteria 5312
174 nmdc:mga05p37_979_c1 3300050507 Bacteria 32457
175 nmdc:mga0qj67_6561_c1 3300050509 Bacteria 8545
176 nmdc:mga06r32_14614_c1 3300050510 Bacteria 7127
177 nmdc:mga06r32_53265_c1 3300050510 Bacteria 3877
178 nmdc:mga08y16_2063_c1 3300050511 Bacteria 20587
179 nmdc:mga0n895_21999_c1 3300050512 Bacteria 5974
180 nmdc:mga0n895_35344_c1 3300050512 Unclassified 4817
181 nmdc:mga0a205_105139_c1 3300050515 Unclassified 2722
182 nmdc:mga0a205_53662_c1 3300050515 Unclassified 3890
183 Ga0500568_0003750 3300053139 Bacteria 8324
184 Ga0590071_000038 3300059421 Bacteria 34004
185 Ga0590075_001806 3300059424 Bacteria 5228
186 Ga0590075_006431 3300059424 Unclassified 2787
187 Ga0590077_000892 3300059426 Bacteria 7660
188 Ga0590077_001477 3300059426 Bacteria 5481
189 Ga0501082_0000116 3300060353 Bacteria 62872
190 Ga0501082_0000293 3300060353 Bacteria 44108
191 nmdc:mga0a205_27616_c1
192 JGI24751J29686_10001897
193 Ga0065704_10080838
194 Ga0065712_10087550
195 Ga0065715_10002427
196 Ga0070683_100027669
197 Ga0070666_10041965
198 Ga0070680_100000666
199 Ga0070669_100009517
200 Ga0070671_100039842
201 Ga0070667_100009253
202 Ga0070703_10005491
203 Ga0070713_100003385
204 Ga0070705_100000017
205 Ga0070700_100032011
206 Ga0070700_100037639
207 Ga0070694_100002390
208 Ga0070694_100015400
209 Ga0070694_100028222
210 Ga0070708_100002346
211 Ga0070708_100009519
212 Ga0070708_100076478
213 Ga0070678_100062606
214 Ga0070681_10000136
215 Ga0070706_100038230
216 Ga0070707_100000056
217 Ga0070698_100012641
218 Ga0070699_100000049
219 Ga0070679_100002136
220 Ga0070697_100004073
221 Ga0070672_100056215
222 Ga0070695_100029535
223 Ga0070696_100000224
224 Ga0070696_100005653
225 Ga0070696_100008827
226 Ga0070693_100000107
227 Ga0070693_100017182
228 Ga0070665_100059155
229 Ga0070665_100122721
230 Ga0070704_100047203
231 Ga0068856_100011640
232 Ga0068864_100016349
233 Ga0068864_100020081
234 Ga0068866_10012705
235 Ga0068861_100031500
236 Ga0068863_100043841
237 Ga0068860_100008312
238 Ga0068862_100040007
239 Ga0081455_10003410
240 Ga0081455_10036783
241 Ga0081539_10000490
242 Ga0081539_10001950
243 Ga0081539_10004366
244 Ga0070717_10021694
245 Ga0070717_10029534
246 Ga0070717_10035371
247 Ga0075365_10037843
248 Ga0075367_10005688
249 Ga0097621_100002350
250 Ga0097621_100005605
251 Ga0075428_100002820
252 Ga0075428_100068179
253 Ga0075428_100069612
254 Ga0075428_100127632
255 Ga0075430_100021202
256 Ga0075431_100003321
257 Ga0075431_100011654
258 Ga0075431_100037207
259 Ga0075433_10098464
260 Ga0075434_100001285
261 Ga0075434_100006438
262 Ga0105240_10002652
263 Ga0105240_10003530
264 Ga0111539_10017408
265 Ga0111539_10030762
266 Ga0111539_10054904
267 Ga0114129_10000688
268 Ga0114129_10000783
269 Ga0114129_10005587
270 Ga0114129_10006729
271 Ga0114129_10039689
272 Ga0114129_10055311
273 Ga0105243_10066404
274 Ga0105242_10029220
275 Ga0105248_10002243
276 Ga0105237_10024638
277 Ga0105249_10033124
278 Ga0105249_10070290
279 Ga0157369_10061138
280 Ga0157374_10009513
281 Ga0157378_10044227
282 Ga0163162_10003347
283 Ga0163163_10000028
284 Ga0163163_10005717
285 Ga0157380_10007815
286 Ga0157380_10010567
287 Ga0157376_10024335
288 Ga0213875_10001357
289 Ga0207653_10002459
290 Ga0207684_10021964
291 Ga0207684_10031088
292 Ga0207707_10000003
293 Ga0207707_10058855
294 Ga0207695_10014330
295 Ga0207695_10087352
296 Ga0207660_10003852
297 Ga0207652_10000324
298 Ga0207646_10001239
299 Ga0207681_10019119
300 Ga0207686_10023562
301 Ga0207689_10041746
302 Ga0207708_10016130
303 Ga0207702_10020970
304 Ga0207648_10062275
305 Ga0207675_100018945
306 Ga0207675_100023468
307 Ga0207683_10031806
308 Ga0207428_10007062
309 Ga0207428_10009902
310 Ga0268266_10001510
311 Ga0307413_10021462
312 Ga0307409_100008262
313 Ga0307409_100022198
314 Ga0307416_100054009
315 Ga0307414_10022385
316 Ga0307415_100002321
317 Ga0373934_0001816
318 Ga0373954_0001855
319 Ga0373956_0000656
320 Ga0373956_0019526
321 Ga0373957_0000725
322 Ga0373957_0004040
323 Ga0373955_0001852
324 Ga0373955_0009067
325 Ga0373961_0000416
326 Ga0373933_0000375
327 Ga0373933_0000941
328 Ga0373937_0000082
329 Ga0373937_0000083
330 Ga0373937_0022926
331 Ga0436364_0410702
332 Ga0436364_0872914
333 Ga0436364_1250074
334 Ga0436365_0897072
335 Ga0495638_0010881
336 Ga0495638_0046171
337 Ga0495651_0037058
338 Ga0495653_0062011
339 Ga0495580_0012931
340 Ga0495582_0000405
341 Ga0495667_0032189
342 Ga0495635_0039527
343 Ga0495604_0007722
344 Ga0495680_0050232
345 Ga0495602_0010027
346 Ga0496104_0088042
347 Ga0496109_0000231
348 Ga0496112_0103809
349 Ga0496114_0000038
350 Ga0501071_0011525
351 Ga0501075_0000609
352 Ga0501075_0005170
353 Ga0501077_0000152
354 Ga0501077_0001818
355 Ga0501080_0004901
356 Ga0501080_0043936
357 Ga0501045_0062507
358 nmdc:mga05p37_11678_c1
359 nmdc:mga05p37_116_c1
360 nmdc:mga05p37_12126_c1
361 nmdc:mga05p37_1288_c1
362 nmdc:mga05p37_30880_c1
363 nmdc:mga05p37_46924_c1
364 nmdc:mga05p37_979_c1
365 nmdc:mga0qj67_6561_c1
366 nmdc:mga06r32_14614_c1
367 nmdc:mga06r32_53265_c1
368 nmdc:mga08y16_2063_c1
369 nmdc:mga0n895_21999_c1
370 nmdc:mga0n895_35344_c1
371 nmdc:mga0a205_105139_c1
372 nmdc:mga0a205_53662_c1
373 Ga0500568_0003750
374 Ga0590071_000038
375 Ga0590075_001806
376 Ga0590075_006431
377 Ga0590077_000892
378 Ga0590077_001477
379 Ga0501082_0000116
380 Ga0501082_0000293

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02687

FtsX

FtsX-like permease family

794

908

0.95

PF02687

FtsX

FtsX-like permease family

374

494

0.84

PF12704

MacB_PCD

MacB-like periplasmic core domain

110

331

0.8

PF12704

MacB_PCD

MacB-like periplasmic core domain

514

763

0.6

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w7c-assembly1.cif.gz_B-2 heme exporter in the unliganded form 0.8492 693 812
3is6-assembly1.cif.gz_A the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7372 53 259
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.7265 53 259
3ftj-assembly1.cif.gz_A crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans 0.7016 454 676
3is6-assembly1.cif.gz_B the crystal structure of a domain of a putative permease protein from porphyromonas gingivalis to 2a 0.6787 53 259
ID Description Score Start End Superfamily
af_E1JGK3_270_443_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.3326 261 394 1.20.140.150
af_A0A1B0GXA3_1_166_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.323 264 395 1.20.1070.10
af_Q9XXJ9_3_324_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.3196 251 411 1.20.1070.10
af_O45739_29_381_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.3188 251 405 1.20.1070.10
af_A0A1D6EX20_272_408_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3083 264 396 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2V5XA48-F1-model_v4 ABC transporter permease 0.9353 6 815 GO:0005886
GO:0022857
AF-A0A2V5XA48-F1-model_v4 ABC transporter permease 0.933 6 815 GO:0005886
GO:0022857
AF-A0A845U2A3-F1-model_v4 ABC transporter permease 0.9317 1 815 GO:0005886
GO:0022857
AF-A0A2V7UC30-F1-model_v4 ABC transporter permease 0.9316 2 815 GO:0005886
GO:0022857
AF-Q1IKF2-F1-model_v4 ABC efflux pump, inner membrane subunit 0.9306 1 815 GO:0005886
GO:0022857

Map