F292790

General Info

Members Datasets Scaffolds Average Seq Length
190 144 380 373

Family's Representative Sequence

Representative Sequence 3300035171|Ga0373946_0016336|Ga0373946_0016336_1352_2617
Length 413
Sequence LVAGADGPFEERSKVTAIDGTGTSGASAQLDATACALAQSSEDLMWQNIAKSFQTELNDLSKVLSFAPAWAIWAALLVGVFVVACLVHAGLLAFLHRLFRSGRPYLNRVLDATKNPIRLALLPTAPLGPEGKFIFVRCLVLGTICLIGWICLKVLHIGANLYLRNFRIDAPDNLMARKHVTQVRVLVRVLDTIVVLVTLGFALMTFDTVRQYGISLFASAGVAGVIFGLAAQPVLSNLIAGIQLAMTQPIRLEDAVTVQNEYGWVEEITATYVVIRLWDLRRLIVPLNYFIQQPFYNWTRQAGANVGSVLLYLDYTAPIDRIRDHAVELVGQTELPGSKLVNVQVTNTSAEAIELRLLVTAASVGDASNLCAELREKLIGFLQREYPEALPRRRHQIIELAGGQLDRPMELRK

Samples

Sample ID Description Type Environment
1 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
25 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
38 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
39 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
40 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
41 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
53 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
54 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
55 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
56 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
57 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
58 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
59 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
60 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
61 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
62 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
63 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
64 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
70 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
71 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
72 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
73 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
74 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
78 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
79 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
82 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
83 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
84 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
85 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
90 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
91 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
94 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
97 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
98 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
99 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
100 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
101 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
104 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
111 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
118 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
119 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
123 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
124 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
125 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
126 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
127 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
128 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
129 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
130 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
131 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
132 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
133 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
134 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
135 2721755755 Bradyrhizobium icense LMTR 13 Isolate Nodule
136 2842694124 Methylopila sp. R-72369 Isolate Unclassified
137 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
138 2844533157 Inquilinus sp. R-72501 v. 2 Isolate Unclassified
139 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
140 2894817345 Aureimonas psammosilenae YIM DR1026 Isolate Unclassified
141 2902330777 Methylobacterium sp. 2A Isolate Unclassified
142 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
143 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
144 3000017691 Rhodobacteraceae bacterium GH2-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.68
Metatranscriptomes 0
Isolates 6.32

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.89
Nodule 0.53
Rhizoplane 2.63
Rhizosphere 79.47
Stem 0
Stem Tuber 0
Unclassified 0.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373946_0016336 3300035171 Bacteria 2827
2 JGI25159J45721_1014511 3300002987 Bacteria 1775
3 JGI25151J46595_10000180 3300003187 Bacteria 79747
4 Ga0070670_100022198 3300005331 Bacteria 5462
5 Ga0070680_100083175 3300005336 Bacteria 2643
6 Ga0070660_100001876 3300005339 Bacteria 14479
7 Ga0070675_100171968 3300005354 Bacteria 1869
8 Ga0070671_100058303 3300005355 Bacteria 3214
9 Ga0070673_100006332 3300005364 Bacteria 7690
10 Ga0070667_100358219 3300005367 Bacteria 1322
11 Ga0070709_10041768 3300005434 Bacteria 2828
12 Ga0070713_100013413 3300005436 Bacteria 6050
13 Ga0070713_100085099 3300005436 Bacteria 2708
14 Ga0070713_100130742 3300005436 Bacteria 2214
15 Ga0070710_10064713 3300005437 Bacteria 2092
16 Ga0070711_100046874 3300005439 Bacteria 2948
17 Ga0070681_10093081 3300005458 Bacteria 2963
18 Ga0070681_10383031 3300005458 Bacteria 1317
19 Ga0070679_100014939 3300005530 Bacteria 7459
20 Ga0070665_100070554 3300005548 Bacteria 3501
21 Ga0070664_100076651 3300005564 Bacteria 2874
22 Ga0081455_10001840 3300005937 Bacteria 25525
23 Ga0081455_10035003 3300005937 Bacteria 4493
24 Ga0070717_10032323 3300006028 Bacteria 4216
25 Ga0075363_100009302 3300006048 Bacteria 4616
26 Ga0075364_10010320 3300006051 Bacteria 5638
27 Ga0070712_100053624 3300006175 Bacteria 2816
28 Ga0075362_10007169 3300006177 Bacteria 4205
29 Ga0075367_10106237 3300006178 Bacteria 1720
30 Ga0075366_10087139 3300006195 Bacteria 1868
31 Ga0075429_100029774 3300006880 Bacteria 4743
32 Ga0114129_10003330 3300009147 Bacteria 22582
33 Ga0114129_10148972 3300009147 Bacteria 3203
34 Ga0105248_10450487 3300009177 Bacteria 1450
35 Ga0105237_10209668 3300009545 Bacteria 1948
36 Ga0099796_10033296 3300010159 Bacteria 1695
37 Ga0157369_10040580 3300013105 Bacteria 5080
38 Ga0163162_10258816 3300013306 Bacteria 1872
39 Ga0157372_10413822 3300013307 Bacteria 1571
40 Ga0157376_10029598 3300014969 Bacteria 4363
41 Ga0213876_10000287 3300021384 Bacteria 45832
42 Ga0213876_10000490 3300021384 Bacteria 31285
43 Ga0209130_1000579 3300025284 Bacteria 35634
44 Ga0209025_1000422 3300025294 Bacteria 84434
45 Ga0209758_1004630 3300025297 Bacteria 11269
46 Ga0207426_1000133 3300025302 Bacteria 206783
47 Ga0207692_10049211 3300025898 Bacteria 2126
48 Ga0207699_10040746 3300025906 Bacteria 2678
49 Ga0207699_10160556 3300025906 Bacteria 1496
50 Ga0207707_10120179 3300025912 Bacteria 2297
51 Ga0207693_10002502 3300025915 Bacteria 16001
52 Ga0207693_10052958 3300025915 Bacteria 3184
53 Ga0207693_10081012 3300025915 Bacteria 2541
54 Ga0207663_10059715 3300025916 Bacteria 2414
55 Ga0207663_10068639 3300025916 Bacteria 2277
56 Ga0207663_10159257 3300025916 Bacteria 1592
57 Ga0207657_10007787 3300025919 Bacteria 10934
58 Ga0207700_10138435 3300025928 Bacteria 1997
59 Ga0207644_10027839 3300025931 Bacteria 3907
60 Ga0207690_10133217 3300025932 Bacteria 1822
61 Ga0207658_10059333 3300025986 Bacteria 2851
62 Ga0207639_10010685 3300026041 Bacteria 6357
63 Ga0265330_10091765 3300031235 Bacteria 1304
64 Ga0265332_10001485 3300031238 Bacteria 13082
65 Ga0265340_10001383 3300031247 Bacteria 13894
66 Ga0265339_10000024 3300031249 Bacteria 169774
67 Ga0265316_10065387 3300031344 Bacteria 2816
68 Ga0265313_10000006 3300031595 Bacteria 183184
69 Ga0265313_10005153 3300031595 Bacteria 9712
70 Ga0373945_0019960 3300035116 Bacteria 2291
71 Ga0373945_0043002 3300035116 Bacteria 1638
72 Ga0373943_0000221 3300035170 Bacteria 23249
73 Ga0373943_0108352 3300035170 Bacteria 1462
74 Ga0373946_0006593 3300035171 Bacteria 4213
75 Ga0373955_0013199 3300035172 Bacteria 3986
76 Ga0373935_0003290 3300035692 Bacteria 9350
77 Ga0373935_0258013 3300035692 Bacteria 1222
78 Ga0373927_0004281 3300035695 Bacteria 10018
79 Ga0373933_0001214 3300035724 Bacteria 15250
80 Ga0373947_0003116 3300035725 Bacteria 9864
81 Ga0373947_0207998 3300035725 Bacteria 1282
82 Ga0373937_0001288 3300036401 Bacteria 20997
83 Ga0373937_0003274 3300036401 Bacteria 13584
84 Ga0373925_0001261 3300037068 Bacteria 22350
85 Ga0373925_0240293 3300037068 Bacteria 1450
86 Ga0373925_0277117 3300037068 Bacteria 1350
87 Ga0395900_0246934 3300037418 Bacteria 1788
88 Ga0436364_0802885 3300037853 Bacteria 1608
89 Ga0436365_0097042 3300039437 Bacteria 195024
90 Ga0436365_0506456 3300039437 Bacteria 108332
91 Ga0436360_0956388 3300039438 Bacteria 3766
92 Ga0436363_0068433 3300039450 Bacteria 1833
93 Ga0436363_0347079 3300039450 Bacteria 1308
94 Ga0436363_0735684 3300039450 Bacteria 2694
95 Ga0436362_0410694 3300039453 Bacteria 2700
96 Ga0436362_1153773 3300039453 Unclassified 1154
97 Ga0439431_0016670 3300041997 Bacteria 1721
98 Ga0466968_0021013 3300044735 Bacteria 2640
99 Ga0466967_0045064 3300045976 Bacteria 3831
100 Ga0495629_0001836 3300046459 Bacteria 16619
101 Ga0495651_0095947 3300046462 Bacteria 2216
102 Ga0495653_0113643 3300046463 Bacteria 1941
103 Ga0495580_0132585 3300046472 Bacteria 1728
104 Ga0495582_0083888 3300046473 Bacteria 1771
105 Ga0495662_0042998 3300046476 Bacteria 2181
106 Ga0495664_0033406 3300046477 Bacteria 3023
107 Ga0495610_0003843 3300046512 Bacteria 11421
108 Ga0495618_0002334 3300046514 Bacteria 12256
109 Ga0495618_0080574 3300046514 Bacteria 2077
110 Ga0495628_0040733 3300046516 Bacteria 3710
111 Ga0495630_0003478 3300046517 Bacteria 10944
112 Ga0495640_0037808 3300046533 Bacteria 3400
113 Ga0495587_0000610 3300046536 Bacteria 24302
114 Ga0495667_0007313 3300046559 Bacteria 7492
115 Ga0495634_0038561 3300046642 Bacteria 3257
116 Ga0495635_0002562 3300046663 Bacteria 12436
117 Ga0495635_0009696 3300046663 Bacteria 6732
118 Ga0495657_0106833 3300046675 Bacteria 1777
119 Ga0495599_0046366 3300046678 Bacteria 2726
120 Ga0495623_0086819 3300046679 Bacteria 1928
121 Ga0495613_0179363 3300046689 Bacteria 1500
122 Ga0495624_0013699 3300046690 Bacteria 5521
123 Ga0495600_0000572 3300046809 Bacteria 19075
124 Ga0495581_0012395 3300047315 Bacteria 4939
125 Ga0495604_0012365 3300047317 Bacteria 6786
126 Ga0495604_0122233 3300047317 Bacteria 1883
127 Ga0495674_0012548 3300047319 Bacteria 7981
128 Ga0495674_0118415 3300047319 Bacteria 2239
129 Ga0495676_0018433 3300047321 Bacteria 6153
130 Ga0495680_0000217 3300047322 Bacteria 62734
131 Ga0495680_0197030 3300047322 Bacteria 1447
132 Ga0495684_0007539 3300047471 Bacteria 8421
133 Ga0495684_0027945 3300047471 Bacteria 4332
134 Ga0495684_0105494 3300047471 Bacteria 2129
135 Ga0495684_0152425 3300047471 Bacteria 1727
136 Ga0495684_0156583 3300047471 Bacteria 1701
137 Ga0495593_0030646 3300047673 Bacteria 2942
138 Ga0495593_0090951 3300047673 Bacteria 1571
139 Ga0495602_0010136 3300048088 Bacteria 9782
140 Ga0495602_0031665 3300048088 Bacteria 4996
141 Ga0496101_0359777 3300048904 Bacteria 1144
142 Ga0496109_0308811 3300048912 Bacteria 1492
143 Ga0496112_0207564 3300048915 Bacteria 1917
144 Ga0496115_0180404 3300048918 Bacteria 1746
145 Ga0496115_0253087 3300048918 Bacteria 1450
146 Ga0496121_0039677 3300048924 Bacteria 4143
147 Ga0501033_0051973 3300049570 Bacteria 3037
148 Ga0501034_0012131 3300049571 Bacteria 8908
149 Ga0501038_0178994 3300049574 Bacteria 1712
150 Ga0501043_0157780 3300049579 Bacteria 1774
151 Ga0501047_0035371 3300049581 Bacteria 4825
152 Ga0501047_0062015 3300049581 Bacteria 3607
153 Ga0501047_0165481 3300049581 Bacteria 2082
154 Ga0501070_0039862 3300049586 Bacteria 3917
155 Ga0501073_0098214 3300049589 Bacteria 2034
156 Ga0501074_0133617 3300049590 Bacteria 1775
157 Ga0501080_0044594 3300049742 Bacteria 4129
158 Ga0501080_0121555 3300049742 Bacteria 2419
159 Ga0501035_0085309 3300049822 Bacteria 2784
160 Ga0501044_0004708 3300049823 Bacteria 15253
161 Ga0501044_0049582 3300049823 Bacteria 4334
162 nmdc:mga03n38_30203_c1 3300050490 Bacteria 2276
163 nmdc:mga0k408_35064_c1 3300050493 Bacteria 2876
164 nmdc:mga05p37_143640_c1 3300050507 Bacteria 2923
165 nmdc:mga05p37_3707_c1 3300050507 Bacteria 17873
166 nmdc:mga09592_128858_c1 3300050508 Bacteria 2176
167 Ga0495601_0008411 3300053077 Bacteria 6096
168 Ga0495612_0000511 3300053078 Bacteria 15584
169 Ga0495612_0001656 3300053078 Bacteria 9168
170 Ga0495612_0105060 3300053078 Bacteria 1205
171 Ga0495595_0000457 3300053084 Bacteria 15460
172 Ga0495595_0010668 3300053084 Bacteria 3825
173 Ga0495619_0002072 3300053085 Bacteria 13327
174 Ga0495619_0202890 3300053085 Bacteria 1373
175 Ga0500593_001474 3300053117 Bacteria 8467
176 Ga0500619_002942 3300053154 Bacteria 3390
177 Ga0501084_0000243 3300054114 Bacteria 41174
178 Ga0501082_0272478 3300060353 Bacteria 1473
179 2596374981 2595698237 Bacteria 6712432
180 2723847095 2721755755 Bacteria 8322773
181 2842696647 2842694124 Bacteria 4063419
182 2842699519 2842698319 Bacteria 5190321
183 2844535576 2844533157 Bacteria 7517899
184 2861695207 2861691609 Bacteria 5628931
185 2894821549 2894817345 Bacteria 4892941
186 2902331128 2902330777 Bacteria 6395352
187 2902335474 2902330777 Bacteria 6395352
188 2902411391 2902405164 Bacteria 6784948
189 2928129904 2928125067 Bacteria 5937560
190 3000017970 3000017691 Bacteria 3772574
191 Ga0373946_0016336
192 JGI25159J45721_1014511
193 JGI25151J46595_10000180
194 Ga0070670_100022198
195 Ga0070680_100083175
196 Ga0070660_100001876
197 Ga0070675_100171968
198 Ga0070671_100058303
199 Ga0070673_100006332
200 Ga0070667_100358219
201 Ga0070709_10041768
202 Ga0070713_100013413
203 Ga0070713_100085099
204 Ga0070713_100130742
205 Ga0070710_10064713
206 Ga0070711_100046874
207 Ga0070681_10093081
208 Ga0070681_10383031
209 Ga0070679_100014939
210 Ga0070665_100070554
211 Ga0070664_100076651
212 Ga0081455_10001840
213 Ga0081455_10035003
214 Ga0070717_10032323
215 Ga0075363_100009302
216 Ga0075364_10010320
217 Ga0070712_100053624
218 Ga0075362_10007169
219 Ga0075367_10106237
220 Ga0075366_10087139
221 Ga0075429_100029774
222 Ga0114129_10003330
223 Ga0114129_10148972
224 Ga0105248_10450487
225 Ga0105237_10209668
226 Ga0099796_10033296
227 Ga0157369_10040580
228 Ga0163162_10258816
229 Ga0157372_10413822
230 Ga0157376_10029598
231 Ga0213876_10000287
232 Ga0213876_10000490
233 Ga0209130_1000579
234 Ga0209025_1000422
235 Ga0209758_1004630
236 Ga0207426_1000133
237 Ga0207692_10049211
238 Ga0207699_10040746
239 Ga0207699_10160556
240 Ga0207707_10120179
241 Ga0207693_10002502
242 Ga0207693_10052958
243 Ga0207693_10081012
244 Ga0207663_10059715
245 Ga0207663_10068639
246 Ga0207663_10159257
247 Ga0207657_10007787
248 Ga0207700_10138435
249 Ga0207644_10027839
250 Ga0207690_10133217
251 Ga0207658_10059333
252 Ga0207639_10010685
253 Ga0265330_10091765
254 Ga0265332_10001485
255 Ga0265340_10001383
256 Ga0265339_10000024
257 Ga0265316_10065387
258 Ga0265313_10000006
259 Ga0265313_10005153
260 Ga0373945_0019960
261 Ga0373945_0043002
262 Ga0373943_0000221
263 Ga0373943_0108352
264 Ga0373946_0006593
265 Ga0373955_0013199
266 Ga0373935_0003290
267 Ga0373935_0258013
268 Ga0373927_0004281
269 Ga0373933_0001214
270 Ga0373947_0003116
271 Ga0373947_0207998
272 Ga0373937_0001288
273 Ga0373937_0003274
274 Ga0373925_0001261
275 Ga0373925_0240293
276 Ga0373925_0277117
277 Ga0395900_0246934
278 Ga0436364_0802885
279 Ga0436365_0097042
280 Ga0436365_0506456
281 Ga0436360_0956388
282 Ga0436363_0068433
283 Ga0436363_0347079
284 Ga0436363_0735684
285 Ga0436362_0410694
286 Ga0436362_1153773
287 Ga0439431_0016670
288 Ga0466968_0021013
289 Ga0466967_0045064
290 Ga0495629_0001836
291 Ga0495651_0095947
292 Ga0495653_0113643
293 Ga0495580_0132585
294 Ga0495582_0083888
295 Ga0495662_0042998
296 Ga0495664_0033406
297 Ga0495610_0003843
298 Ga0495618_0002334
299 Ga0495618_0080574
300 Ga0495628_0040733
301 Ga0495630_0003478
302 Ga0495640_0037808
303 Ga0495587_0000610
304 Ga0495667_0007313
305 Ga0495634_0038561
306 Ga0495635_0002562
307 Ga0495635_0009696
308 Ga0495657_0106833
309 Ga0495599_0046366
310 Ga0495623_0086819
311 Ga0495613_0179363
312 Ga0495624_0013699
313 Ga0495600_0000572
314 Ga0495581_0012395
315 Ga0495604_0012365
316 Ga0495604_0122233
317 Ga0495674_0012548
318 Ga0495674_0118415
319 Ga0495676_0018433
320 Ga0495680_0000217
321 Ga0495680_0197030
322 Ga0495684_0007539
323 Ga0495684_0027945
324 Ga0495684_0105494
325 Ga0495684_0152425
326 Ga0495684_0156583
327 Ga0495593_0030646
328 Ga0495593_0090951
329 Ga0495602_0010136
330 Ga0495602_0031665
331 Ga0496101_0359777
332 Ga0496109_0308811
333 Ga0496112_0207564
334 Ga0496115_0180404
335 Ga0496115_0253087
336 Ga0496121_0039677
337 Ga0501033_0051973
338 Ga0501034_0012131
339 Ga0501038_0178994
340 Ga0501043_0157780
341 Ga0501047_0035371
342 Ga0501047_0062015
343 Ga0501047_0165481
344 Ga0501070_0039862
345 Ga0501073_0098214
346 Ga0501074_0133617
347 Ga0501080_0044594
348 Ga0501080_0121555
349 Ga0501035_0085309
350 Ga0501044_0004708
351 Ga0501044_0049582
352 nmdc:mga03n38_30203_c1
353 nmdc:mga0k408_35064_c1
354 nmdc:mga05p37_143640_c1
355 nmdc:mga05p37_3707_c1
356 nmdc:mga09592_128858_c1
357 Ga0495601_0008411
358 Ga0495612_0000511
359 Ga0495612_0001656
360 Ga0495612_0105060
361 Ga0495595_0000457
362 Ga0495595_0010668
363 Ga0495619_0002072
364 Ga0495619_0202890
365 Ga0500593_001474
366 Ga0500619_002942
367 Ga0501084_0000243
368 Ga0501082_0272478
369 2596374981
370 2723847095
371 2842696647
372 2842699519
373 2844535576
374 2861695207
375 2894821549
376 2902331128
377 2902335474
378 2902411391
379 2928129904
380 3000017970

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00924

MS_channel_2nd

Mechanosensitive ion channel, beta-domain

233

300

0.98

Map