F291661

General Info

Members Datasets Scaffolds Average Seq Length
189 121 179 233

Family's Representative Sequence

Representative Sequence 3300053092|Ga0500583_0001204|Ga0500583_0001204_265_1122
Length 285
Sequence MCNSVVHWLGAGHYLLAFVVIFTKSFSIGICAGLTDCYSHTLLSNDCIFILTIMIDLSHAENQIHSVTNFQDLVSTPFNGEINAICWTRKLPGDFSEIVEKVVLSGNITTIEQEELYELQLSEQGQLAREILLNDLKLLKAHGASPILNVINYYDRDDTYPFFPTDVYSFHVDRSPIPTDTFLCTYYGESSEILPNSQGKKKVLIPEIRAELKKLYHGAEEGFESFLSEHFFDLHYQAEPNARPISLGLGHLWRLAVDHPESQVPPCLHRAPKEKSGQNRLLMIC

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
3 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
4 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
5 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
6 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
7 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
8 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
9 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
10 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
11 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
12 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
13 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
14 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
15 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
16 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
17 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
18 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
19 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
20 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
21 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
22 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
23 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
24 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
25 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
26 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
27 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
28 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
29 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
30 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
54 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
59 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
60 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
62 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
64 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
66 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
89 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
90 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
91 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
92 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
93 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
94 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
95 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
96 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
97 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
98 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
99 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
100 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
103 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
104 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
105 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
106 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
107 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
108 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
109 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
110 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
111 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
112 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
113 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
114 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
115 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
116 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
117 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
118 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
119 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
120 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
121 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.71
Metatranscriptomes 0
Isolates 5.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.28
Nodule 0
Rhizoplane 0.53
Rhizosphere 61.38
Stem 0
Stem Tuber 0
Unclassified 14.81

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000062 3300001979 Bacteria 34499
2 JGI24739J22299_10007564 3300001989 Bacteria 4069
3 JGI24739J22299_10014482 3300001989 Bacteria 2869
4 JGI25154J39366_1000002 3300002738 Bacteria 466942
5 JGI25157J39369_1001969 3300002741 Bacteria 6081
6 JGI25153J46596_10027928 3300003215 Bacteria 1967
7 rootH1_10095696 3300003316 Bacteria 5736
8 rootH1_10116344 3300003316 Bacteria 5219
9 rootH2_10016664 3300003320 Bacteria 30381
10 rootL2_10053315 3300003322 Bacteria 2154
11 rootL2_10082417 3300003322 Bacteria 13700
12 rootL2_10215067 3300003322 Bacteria 2293
13 rootL2_10263912 3300003322 Bacteria 2016
14 JGI25160J50197_1001637 3300003354 Bacteria 10988
15 JGI25160J50197_1016577 3300003354 Bacteria 2370
16 Ga0055535_1002003 3300003761 Bacteria 8371
17 Ga0055526_1007650 3300003771 Bacteria 5570
18 Ga0055526_1008372 3300003771 Bacteria 5175
19 Ga0055528_1000154 3300003790 Bacteria 57131
20 Ga0055530_10001127 3300003791 Bacteria 20845
21 Ga0055543_1003803 3300004625 Bacteria 4294
22 Ga0065165_1000328 3300005262 Bacteria 77624
23 Ga0065165_1010312 3300005262 Bacteria 4056
24 Ga0070683_100027777 3300005329 Bacteria 5106
25 Ga0070690_100205516 3300005330 Bacteria 1372
26 Ga0070666_10041655 3300005335 Bacteria 3070
27 Ga0070682_100054654 3300005337 Bacteria 2506
28 Ga0070691_10013315 3300005341 Bacteria 3768
29 Ga0070667_100359263 3300005367 Bacteria 1320
30 Ga0070684_100032847 3300005535 Bacteria 4428
31 Ga0070665_100061885 3300005548 Bacteria 3753
32 Ga0070665_100891981 3300005548 Bacteria 902
33 Ga0068855_100008965 3300005563 Bacteria 12091
34 Ga0068855_100019567 3300005563 Bacteria 8131
35 Ga0068855_100024326 3300005563 Bacteria 7250
36 Ga0068855_100589428 3300005563 Bacteria 1200
37 Ga0068856_100037276 3300005614 Bacteria 4771
38 Ga0068856_100160797 3300005614 Bacteria 2256
39 Ga0068856_100433156 3300005614 Bacteria 1335
40 Ga0068852_100011208 3300005616 Bacteria 6736
41 Ga0068852_100077822 3300005616 Bacteria 2933
42 Ga0068858_100664366 3300005842 Bacteria 1013
43 Ga0068860_100239665 3300005843 Bacteria 1764
44 Ga0081540_1031461 3300005983 Bacteria 2916
45 Ga0097621_100428732 3300006237 Bacteria 1188
46 Ga0105240_10003516 3300009093 Bacteria 24308
47 Ga0105240_10003698 3300009093 Bacteria 23636
48 Ga0105240_10005784 3300009093 Bacteria 18340
49 Ga0105240_10341580 3300009093 Bacteria 1701
50 Ga0105240_10359390 3300009093 Bacteria 1650
51 Ga0105240_10720094 3300009093 Bacteria 1087
52 Ga0105241_10434882 3300009174 Bacteria 1158
53 Ga0105237_10002458 3300009545 Bacteria 23005
54 Ga0105237_10055279 3300009545 Bacteria 3976
55 Ga0105238_10008079 3300009551 Bacteria 10524
56 Ga0105238_10048659 3300009551 Bacteria 4271
57 Ga0105239_10000099 3300010375 Bacteria 120205
58 Ga0105239_10002818 3300010375 Bacteria 21747
59 Ga0105239_10005620 3300010375 Bacteria 14658
60 Ga0105239_10044083 3300010375 Bacteria 4890
61 Ga0105239_10484223 3300010375 Bacteria 1406
62 Ga0157373_10005553 3300013100 Bacteria 9452
63 Ga0157373_10236723 3300013100 Bacteria 1290
64 Ga0157373_10238818 3300013100 Bacteria 1284
65 Ga0157373_10341513 3300013100 Bacteria 1067
66 Ga0157371_10262325 3300013102 Bacteria 1246
67 Ga0157371_10497270 3300013102 Bacteria 900
68 Ga0157370_10001863 3300013104 Bacteria 26004
69 Ga0157370_10508824 3300013104 Bacteria 1106
70 Ga0157369_10467574 3300013105 Bacteria 1306
71 Ga0157369_10568455 3300013105 Bacteria 1171
72 Ga0157374_10000009 3300013296 Bacteria 564330
73 Ga0157378_10705521 3300013297 Bacteria 1029
74 Ga0163162_10583884 3300013306 Bacteria 1244
75 Ga0157372_10013315 3300013307 Bacteria 8778
76 Ga0157372_10019350 3300013307 Bacteria 7335
77 Ga0157372_10097340 3300013307 Bacteria 3355
78 Ga0163163_10706932 3300014325 Bacteria 1071
79 Ga0157380_10692661 3300014326 Bacteria 1023
80 Ga0157376_10001943 3300014969 Bacteria 13809
81 Ga0163161_10082875 3300017792 Bacteria 2364
82 Ga0163161_10479293 3300017792 Bacteria 1010
83 Ga0209258_100445 3300025242 Bacteria 46293
84 Ga0209646_1000005 3300025246 Bacteria 717627
85 Ga0209646_1000874 3300025246 Bacteria 10040
86 Ga0209646_1004339 3300025246 Bacteria 2596
87 Ga0209026_1000232 3300025250 Bacteria 75219
88 Ga0209148_1000392 3300025254 Bacteria 51777
89 Ga0209129_1020203 3300025258 Bacteria 1243
90 Ga0209564_1001363 3300025295 Bacteria 25652
91 Ga0209564_1001824 3300025295 Bacteria 19546
92 Ga0209758_1000904 3300025297 Bacteria 40285
93 Ga0209758_1002001 3300025297 Bacteria 21948
94 Ga0209758_1002965 3300025297 Bacteria 16274
95 Ga0209758_1004109 3300025297 Bacteria 12471
96 Ga0209050_1000789 3300025298 Bacteria 44988
97 Ga0207426_1000600 3300025302 Bacteria 47121
98 Ga0207426_1001766 3300025302 Bacteria 16358
99 Ga0209051_1008602 3300025303 Bacteria 5382
100 Ga0209257_1000001 3300025304 Bacteria 2274655
101 Ga0209257_1006533 3300025304 Bacteria 7450
102 Ga0207680_10033646 3300025903 Bacteria 2926
103 Ga0207647_10015499 3300025904 Bacteria 5223
104 Ga0207647_10126993 3300025904 Bacteria 1501
105 Ga0207654_10020462 3300025911 Bacteria 3507
106 Ga0207654_10445045 3300025911 Bacteria 908
107 Ga0207695_10000236 3300025913 Bacteria 146419
108 Ga0207695_10000456 3300025913 Bacteria 89131
109 Ga0207695_10014344 3300025913 Bacteria 9396
110 Ga0207695_10282870 3300025913 Bacteria 1552
111 Ga0207695_10538870 3300025913 Bacteria 1049
112 Ga0207671_10004690 3300025914 Bacteria 12926
113 Ga0207671_10007395 3300025914 Bacteria 9533
114 Ga0207671_10018453 3300025914 Bacteria 5352
115 Ga0207671_10034287 3300025914 Bacteria 3772
116 Ga0207694_10420781 3300025924 Bacteria 1113
117 Ga0207689_10431995 3300025942 Bacteria 1100
118 Ga0207661_10003146 3300025944 Bacteria 11450
119 Ga0207667_10004251 3300025949 Bacteria 17578
120 Ga0207667_10345099 3300025949 Bacteria 1519
121 Ga0207640_10047450 3300025981 Bacteria 2770
122 Ga0207677_10391081 3300026023 Bacteria 1176
123 Ga0207639_10006558 3300026041 Bacteria 7913
124 Ga0207639_10089246 3300026041 Bacteria 2463
125 Ga0207702_10129105 3300026078 Bacteria 2272
126 Ga0207702_10166624 3300026078 Bacteria 2016
127 Ga0207702_10188760 3300026078 Bacteria 1903
128 Ga0207702_10287411 3300026078 Bacteria 1557
129 Ga0207702_10395393 3300026078 Bacteria 1332
130 Ga0207674_10053077 3300026116 Bacteria 4132
131 Ga0207698_10105124 3300026142 Bacteria 2351
132 Ga0268266_10000714 3300028379 Bacteria 44837
133 Ga0307515_10000001 3300028794 Bacteria 4259510
134 Ga0307515_10014081 3300028794 Bacteria 14873
135 Ga0265327_10000055 3300031251 Bacteria 247188
136 Ga0265327_10015132 3300031251 Bacteria 5001
137 Ga0307509_10169386 3300031507 Bacteria 2066
138 Ga0395900_0095666 3300037418 Bacteria 3052
139 Ga0439439_0070057 3300041406 Bacteria 938
140 Ga0451791_0548984 3300041451 Bacteria 773
141 Ga0451841_0626402 3300041498 Unclassified 1049
142 Ga0439431_0001837 3300041997 Bacteria 4705
143 Ga0439449_0063975 3300042007 Bacteria 1357
144 Ga0439457_002847 3300042014 Bacteria 4834
145 Ga0466972_0000078 3300044658 Bacteria 91188
146 Ga0466972_0010783 3300044658 Bacteria 4587
147 Ga0466982_0144496 3300044672 Bacteria 1458
148 Ga0466964_0063025 3300044706 Bacteria 1548
149 Ga0495627_098047 3300046453 Bacteria 838
150 Ga0495632_0054926 3300046519 Bacteria 1951
151 Ga0495609_0072773 3300046538 Bacteria 1509
152 Ga0495633_0000199 3300046558 Bacteria 76789
153 Ga0495625_0121741 3300046660 Bacteria 1775
154 Ga0496124_0029515 3300048927 Bacteria 4885
155 Ga0496126_0002792 3300048929 Bacteria 22983
156 Ga0496126_0270986 3300048929 Bacteria 1409
157 Ga0501198_005531 3300049649 Bacteria 1781
158 Ga0501223_001184 3300049663 Bacteria 6135
159 Ga0501225_0000755 3300049705 Bacteria 10139
160 Ga0501241_000393 3300049758 Bacteria 9579
161 Ga0501241_007866 3300049758 Bacteria 1952
162 nmdc:mga0k408_107786_c1 3300050493 Bacteria 1645
163 Ga0500578_0000003 3300053086 Bacteria 266033
164 Ga0500644_0000581 3300053088 Bacteria 13992
165 Ga0500644_0166968 3300053088 Unclassified 893
166 Ga0500583_0000113 3300053092 Bacteria 39569
167 Ga0500583_0001204 3300053092 Bacteria 7398
168 Ga0500583_0012676 3300053092 Bacteria 3226
169 Ga0500562_000078 3300053108 Bacteria 44915
170 Ga0500569_000660 3300053109 Bacteria 5930
171 Ga0500652_014934 3300053131 Bacteria 2790
172 Ga0500577_0000863 3300053142 Bacteria 7834
173 Ga0500579_150595 3300053143 Bacteria 1016
174 Ga0500590_091244 3300053148 Bacteria 1479
175 Ga0500616_0009227 3300053153 Bacteria 6017
176 Ga0500622_0000493 3300053156 Bacteria 36875
177 Ga0500622_0001360 3300053156 Bacteria 19742
178 Ga0500622_0080260 3300053156 Bacteria 1634
179 Ga0500645_005808 3300053730 Bacteria 4486

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013104 Ga0157370_10508824 Ga0157370_105088242 228
2 iso_pu_bacteria 2738541278 2738728087 228
3 iso_pu_bacteria 2896085136 2896088589 228
4 iso_pu_bacteria 2929154850 2929156532 228
5 iso_pu_bacteria 2929239360 2929242306 228
6 iso_pu_bacteria 2929921140 2929921202 228
7 iso_pu_bacteria 2945977869 2945978370 228
8 iso_pu_bacteria 2946013367 2946015776 228
9 iso_pu_bacteria 8056440228 8056441485 228
10 3300003354 JGI25160J50197_1016577 JGI25160J50197_10165772 229
11 3300005262 Ga0065165_1010312 Ga0065165_10103122 229
12 3300005563 Ga0068855_100589428 Ga0068855_1005894282 229
13 3300014325 Ga0163163_10706932 Ga0163163_107069322 229
14 3300025258 Ga0209129_1020203 Ga0209129_10202031 229
15 3300025297 Ga0209758_1000904 Ga0209758_10009049 229
16 3300025302 Ga0207426_1000600 Ga0207426_100060015 229
17 iso_pu_bacteria 2884791551 2884792328 229
18 3300002738 JGI25154J39366_1000002 JGI25154J39366_1000002211 230
19 3300002741 JGI25157J39369_1001969 JGI25157J39369_10019697 230
20 3300025246 Ga0209646_1000005 Ga0209646_1000005165 230
21 3300025246 Ga0209646_1000874 Ga0209646_10008742 230
22 3300025250 Ga0209026_1000232 Ga0209026_100023214 230
23 3300037418 Ga0395900_0095666 Ga0395900_0095666_917_1609 230
24 3300005330 Ga0070690_100205516 Ga0070690_1002055161 231
25 3300005563 Ga0068855_100008965 Ga0068855_1000089653 231
26 3300010375 Ga0105239_10000099 Ga0105239_1000009969 231
27 3300025911 Ga0207654_10020462 Ga0207654_100204622 231
28 3300041498 Ga0451841_0626402 Ga0451841_0626402_111_809 231
29 3300044672 Ga0466982_0144496 Ga0466982_0144496_658_1371 231
30 3300053088 Ga0500644_0166968 Ga0500644_0166968_35_730 231
31 3300053148 Ga0500590_091244 Ga0500590_091244_701_1396 231
32 3300001979 JGI24740J21852_10000062 JGI24740J21852_1000006219 232
33 3300001989 JGI24739J22299_10007564 JGI24739J22299_100075645 232
34 3300001989 JGI24739J22299_10014482 JGI24739J22299_100144825 232
35 3300003215 JGI25153J46596_10027928 JGI25153J46596_100279281 232
36 3300003316 rootH1_10095696 rootH1_100956965 232
37 3300003316 rootH1_10116344 rootH1_101163444 232
38 3300003320 rootH2_10016664 rootH2_1001666421 232
39 3300003322 rootL2_10053315 rootL2_100533152 232
40 3300003322 rootL2_10082417 rootL2_1008241716 232
41 3300003322 rootL2_10215067 rootL2_102150672 232
42 3300003322 rootL2_10263912 rootL2_102639122 232
43 3300003354 JGI25160J50197_1001637 JGI25160J50197_10016379 232
44 3300003761 Ga0055535_1002003 Ga0055535_10020035 232
45 3300003771 Ga0055526_1007650 Ga0055526_10076506 232
46 3300003771 Ga0055526_1008372 Ga0055526_10083725 232
47 3300003790 Ga0055528_1000154 Ga0055528_100015433 232
48 3300003791 Ga0055530_10001127 Ga0055530_1000112716 232
49 3300004625 Ga0055543_1003803 Ga0055543_10038034 232
50 3300005262 Ga0065165_1000328 Ga0065165_100032853 232
51 3300005329 Ga0070683_100027777 Ga0070683_1000277775 232
52 3300005335 Ga0070666_10041655 Ga0070666_100416554 232
53 3300005337 Ga0070682_100054654 Ga0070682_1000546543 232
54 3300005341 Ga0070691_10013315 Ga0070691_100133152 232
55 3300005367 Ga0070667_100359263 Ga0070667_1003592632 232
56 3300005535 Ga0070684_100032847 Ga0070684_1000328474 232
57 3300005548 Ga0070665_100061885 Ga0070665_1000618851 232
58 3300005548 Ga0070665_100891981 Ga0070665_1008919812 232
59 3300005563 Ga0068855_100019567 Ga0068855_1000195677 232
60 3300005563 Ga0068855_100024326 Ga0068855_1000243265 232
61 3300005614 Ga0068856_100037276 Ga0068856_1000372761 232
62 3300005614 Ga0068856_100160797 Ga0068856_1001607972 232
63 3300005614 Ga0068856_100433156 Ga0068856_1004331562 232
64 3300005616 Ga0068852_100011208 Ga0068852_1000112082 232
65 3300005616 Ga0068852_100077822 Ga0068852_1000778224 232
66 3300005842 Ga0068858_100664366 Ga0068858_1006643662 232
67 3300005843 Ga0068860_100239665 Ga0068860_1002396651 232
68 3300005983 Ga0081540_1031461 Ga0081540_10314612 232
69 3300006237 Ga0097621_100428732 Ga0097621_1004287322 232
70 3300009093 Ga0105240_10003516 Ga0105240_1000351613 232
71 3300009093 Ga0105240_10003698 Ga0105240_1000369823 232
72 3300009093 Ga0105240_10005784 Ga0105240_1000578416 232
73 3300009093 Ga0105240_10341580 Ga0105240_103415802 232
74 3300009093 Ga0105240_10359390 Ga0105240_103593902 232
75 3300009093 Ga0105240_10720094 Ga0105240_107200941 232
76 3300009174 Ga0105241_10434882 Ga0105241_104348822 232
77 3300009545 Ga0105237_10002458 Ga0105237_1000245817 232
78 3300009545 Ga0105237_10055279 Ga0105237_100552794 232
79 3300009551 Ga0105238_10008079 Ga0105238_100080791 232
80 3300009551 Ga0105238_10048659 Ga0105238_100486592 232
81 3300010375 Ga0105239_10002818 Ga0105239_100028183 232
82 3300010375 Ga0105239_10005620 Ga0105239_1000562013 232
83 3300010375 Ga0105239_10044083 Ga0105239_100440832 232
84 3300010375 Ga0105239_10484223 Ga0105239_104842232 232
85 3300013100 Ga0157373_10005553 Ga0157373_100055534 232
86 3300013100 Ga0157373_10236723 Ga0157373_102367231 232
87 3300013100 Ga0157373_10238818 Ga0157373_102388182 232
88 3300013100 Ga0157373_10341513 Ga0157373_103415131 232
89 3300013102 Ga0157371_10262325 Ga0157371_102623252 232
90 3300013102 Ga0157371_10497270 Ga0157371_104972701 232
91 3300013104 Ga0157370_10001863 Ga0157370_1000186328 232
92 3300013105 Ga0157369_10467574 Ga0157369_104675741 232
93 3300013105 Ga0157369_10568455 Ga0157369_105684551 232
94 3300013296 Ga0157374_10000009 Ga0157374_10000009426 232
95 3300013297 Ga0157378_10705521 Ga0157378_107055211 232
96 3300013306 Ga0163162_10583884 Ga0163162_105838841 232
97 3300013307 Ga0157372_10013315 Ga0157372_1001331512 232
98 3300013307 Ga0157372_10019350 Ga0157372_100193502 232
99 3300013307 Ga0157372_10097340 Ga0157372_100973402 232
100 3300014326 Ga0157380_10692661 Ga0157380_106926611 232
101 3300014969 Ga0157376_10001943 Ga0157376_1000194313 232
102 3300017792 Ga0163161_10082875 Ga0163161_100828753 232
103 3300017792 Ga0163161_10479293 Ga0163161_104792932 232
104 3300025242 Ga0209258_100445 Ga0209258_10044518 232
105 3300025246 Ga0209646_1004339 Ga0209646_10043392 232
106 3300025254 Ga0209148_1000392 Ga0209148_100039218 232
107 3300025295 Ga0209564_1001363 Ga0209564_100136313 232
108 3300025295 Ga0209564_1001824 Ga0209564_100182414 232
109 3300025297 Ga0209758_1002001 Ga0209758_10020018 232
110 3300025297 Ga0209758_1002965 Ga0209758_10029652 232
111 3300025297 Ga0209758_1004109 Ga0209758_10041098 232
112 3300025298 Ga0209050_1000789 Ga0209050_100078935 232
113 3300025302 Ga0207426_1001766 Ga0207426_100176610 232
114 3300025303 Ga0209051_1008602 Ga0209051_10086028 232
115 3300025304 Ga0209257_1000001 Ga0209257_1000001731 232
116 3300025304 Ga0209257_1006533 Ga0209257_10065336 232
117 3300025903 Ga0207680_10033646 Ga0207680_100336461 232
118 3300025904 Ga0207647_10015499 Ga0207647_100154996 232
119 3300025904 Ga0207647_10126993 Ga0207647_101269932 232
120 3300025911 Ga0207654_10445045 Ga0207654_104450451 232
121 3300025913 Ga0207695_10000236 Ga0207695_1000023661 232
122 3300025913 Ga0207695_10000456 Ga0207695_1000045648 232
123 3300025913 Ga0207695_10014344 Ga0207695_1001434412 232
124 3300025913 Ga0207695_10282870 Ga0207695_102828702 232
125 3300025913 Ga0207695_10538870 Ga0207695_105388702 232
126 3300025914 Ga0207671_10004690 Ga0207671_100046903 232
127 3300025914 Ga0207671_10007395 Ga0207671_100073952 232
128 3300025914 Ga0207671_10018453 Ga0207671_100184536 232
129 3300025914 Ga0207671_10034287 Ga0207671_100342872 232
130 3300025924 Ga0207694_10420781 Ga0207694_104207812 232
131 3300025942 Ga0207689_10431995 Ga0207689_104319952 232
132 3300025944 Ga0207661_10003146 Ga0207661_100031465 232
133 3300025949 Ga0207667_10004251 Ga0207667_100042516 232
134 3300025949 Ga0207667_10345099 Ga0207667_103450992 232
135 3300025981 Ga0207640_10047450 Ga0207640_100474505 232
136 3300026023 Ga0207677_10391081 Ga0207677_103910811 232
137 3300026041 Ga0207639_10006558 Ga0207639_100065583 232
138 3300026041 Ga0207639_10089246 Ga0207639_100892462 232
139 3300026078 Ga0207702_10129105 Ga0207702_101291052 232
140 3300026078 Ga0207702_10166624 Ga0207702_101666242 232
141 3300026078 Ga0207702_10188760 Ga0207702_101887603 232
142 3300026078 Ga0207702_10287411 Ga0207702_102874112 232
143 3300026078 Ga0207702_10395393 Ga0207702_103953932 232
144 3300026116 Ga0207674_10053077 Ga0207674_100530771 232
145 3300026142 Ga0207698_10105124 Ga0207698_101051244 232
146 3300028379 Ga0268266_10000714 Ga0268266_1000071427 232
147 3300028794 Ga0307515_10000001 Ga0307515_100000012837 232
148 3300028794 Ga0307515_10014081 Ga0307515_1001408110 232
149 3300031251 Ga0265327_10000055 Ga0265327_1000005565 232
150 3300031251 Ga0265327_10015132 Ga0265327_100151327 232
151 3300031507 Ga0307509_10169386 Ga0307509_101693862 232
152 3300041406 Ga0439439_0070057 Ga0439439_0070057_195_893 232
153 3300041451 Ga0451791_0548984 Ga0451791_0548984_33_731 232
154 3300041997 Ga0439431_0001837 Ga0439431_0001837_204_902 232
155 3300042007 Ga0439449_0063975 Ga0439449_0063975_240_938 232
156 3300042014 Ga0439457_002847 Ga0439457_002847_3466_4164 232
157 3300044658 Ga0466972_0000078 Ga0466972_0000078_4447_5145 232
158 3300044658 Ga0466972_0010783 Ga0466972_0010783_823_1521 232
159 3300044706 Ga0466964_0063025 Ga0466964_0063025_73_771 232
160 3300046453 Ga0495627_098047 Ga0495627_098047_20_718 232
161 3300046519 Ga0495632_0054926 Ga0495632_0054926_310_1008 232
162 3300046538 Ga0495609_0072773 Ga0495609_0072773_345_1043 232
163 3300046558 Ga0495633_0000199 Ga0495633_0000199_52678_53376 232
164 3300046660 Ga0495625_0121741 Ga0495625_0121741_1046_1744 232
165 3300048927 Ga0496124_0029515 Ga0496124_0029515_2734_3432 232
166 3300048929 Ga0496126_0002792 Ga0496126_0002792_12233_12931 232
167 3300048929 Ga0496126_0270986 Ga0496126_0270986_608_1306 232
168 3300049649 Ga0501198_005531 Ga0501198_005531_287_985 232
169 3300049663 Ga0501223_001184 Ga0501223_001184_2024_2722 232
170 3300049705 Ga0501225_0000755 Ga0501225_0000755_6477_7175 232
171 3300049758 Ga0501241_000393 Ga0501241_000393_7928_8626 232
172 3300049758 Ga0501241_007866 Ga0501241_007866_1177_1875 232
173 3300050493 nmdc:mga0k408_107786_c1 nmdc:mga0k408_107786_c1_909_1607 232
174 3300053086 Ga0500578_0000003 Ga0500578_0000003_168787_169485 232
175 3300053088 Ga0500644_0000581 Ga0500644_0000581_12364_13062 232
176 3300053092 Ga0500583_0000113 Ga0500583_0000113_37330_38028 232
177 3300053092 Ga0500583_0001204 Ga0500583_0001204_265_1122 232
178 3300053092 Ga0500583_0012676 Ga0500583_0012676_1839_2537 232
179 3300053108 Ga0500562_000078 Ga0500562_000078_15598_16296 232
180 3300053109 Ga0500569_000660 Ga0500569_000660_2274_2972 232
181 3300053131 Ga0500652_014934 Ga0500652_014934_695_1393 232
182 3300053142 Ga0500577_0000863 Ga0500577_0000863_4663_5361 232
183 3300053143 Ga0500579_150595 Ga0500579_150595_112_810 232
184 3300053153 Ga0500616_0009227 Ga0500616_0009227_10_789 232
185 3300053156 Ga0500622_0000493 Ga0500622_0000493_12532_13233 232
186 3300053156 Ga0500622_0001360 Ga0500622_0001360_3867_4565 232
187 3300053156 Ga0500622_0080260 Ga0500622_0080260_862_1560 232
188 3300053730 Ga0500645_005808 Ga0500645_005808_3632_4330 232
189 iso_pu_bacteria 2818991460 2819681720 232

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bvp-assembly1.cif.gz_A crystal structure of 3-hydroxyanthranilate-3,4-dioxygenase n27a from cupriavidus metallidurans 0.5684 90 230
4hsl-assembly1.cif.gz_A-2 2.00 angstrom x-ray crystal structure of substrate-bound e110a 3-hydroxyanthranilate-3,4-dioxygenase from cupriavidus metallidurans 0.5671 90 230
6vab-assembly1.cif.gz_D mouse retromer sub-structure: vps35/vps35 flat dimer 0.5592 60 88
6bvr-assembly1.cif.gz_A crystal structure of 3-hydroxyanthranilate-3,4-dioxygenase i142a from cupriavidus metallidurans 0.541 90 230
3btz-assembly1.cif.gz_A crystal structure of human abh2 cross-linked to dsdna 0.5372 76 231
ID Description Score Start End Superfamily
af_Q9U280_432_618_3.40.1110.10 Alpha Beta;3-Layer(aba) Sandwich;Calcium-transporting ATPase, cytoplasmic domain N;Calcium-transporting ATPase, cytoplasmic domain N 0.7098 55 102 3.40.1110.10
af_Q9ZTA1_261_388_2.60.120.330 Mainly Beta;Sandwich;Jelly Rolls;B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.5724 126 232 2.60.120.330
af_Q2FWB3_199_285_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.5566 93 232 2.60.120.10
3rzlA00 Mainly Beta;Sandwich;Jelly Rolls;Alpha-ketoglutarate-dependent dioxygenase AlkB-like 0.5353 76 231 2.60.120.590
2bnoB02 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.5333 93 231 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A4R0D572-F1-model_v4 DUF1826 domain-containing protein 0.936 16 232
AF-A0A173MB84-F1-model_v4 DUF1826 domain-containing protein 0.9322 1 232
AF-A0A4R0D572-F1-model_v4 DUF1826 domain-containing protein 0.9318 16 232
AF-A0A4V1ULV8-F1-model_v4 deleted 0.9313 34 232
AF-A0A173MB84-F1-model_v4 DUF1826 domain-containing protein 0.9284 1 232

Feature Viewer

pLDDT pTM Quality
86.5 0.84 High
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Predicted Structure (AlphaFold2)

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