F291181

General Info

Members Datasets Scaffolds Average Seq Length
189 102 378 495

Family's Representative Sequence

Representative Sequence 3300031616|Ga0307508_10005942|Ga0307508_100059426
Length 511
Sequence MALKVLFVSSEVAPFRKTGGLADVAGSLPKALRRMGIDVRVVMPLYQGMRWHDLERLDGVLGVPMWWGTARGGVRLGRLPGSDVPIYFLEYNRYFDRPHVYGPPGDAYPDNLERFTYLSRGALELCKALGFFPDIVHANDWQTALVPVYLDTVEWFQRLHAAATVFTIHNMAYQGVFDPGALFITGLGREHFNSREFEHFGDVNLMKAAVRRATLLSTVSPTYAGEIQTTEHGFGLDGELAGRGSDLHGILNGIDEEWDPERDPYIAAPFSAEATAGKVKCKAALQRELGLPVRPDLPLLGAIGRLTPQKGYDVLAAALDRILAWDVQLVLLGTGDPELEREFAAAAARRGDRLRCRVGFDNGLAHRIEAGSDFFVMPSRFEPCGLNQMYSLRYGTLPIVRATGGLIDTVSDYDEATGGGTGFVFQDLNPDSLANTIGWAVSTYFDRPTHLRAMRKRAMQRDFSWGSAAAEYGRLYVAAIERRLGRPSPVQLPEVLDLPGEWPRVVDGRGS

Samples

Sample ID Description Type Environment
1 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
26 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
27 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
42 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
43 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
44 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
45 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
46 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
47 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
50 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
51 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
52 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
53 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
54 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
55 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
56 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
57 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
58 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
59 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
60 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
61 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
62 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
63 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
64 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
65 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
66 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
67 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
68 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
69 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
70 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
77 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
78 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
79 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
82 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
85 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
86 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
89 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
90 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
91 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
96 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
97 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
98 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
100 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
101 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
102 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.94
Metatranscriptomes 1.06
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.17
Rhizosphere 94.18
Stem 0
Stem Tuber 0
Unclassified 2.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307508_10005942 3300031616 Bacteria 11515
2 rootH2_10002582 3300003320 Bacteria 35713
3 rootL2_10157694 3300003322 Unclassified 4477
4 Ga0070658_10000480 3300005327 Bacteria 34656
5 Ga0070670_100006488 3300005331 Bacteria 9902
6 Ga0070666_10049801 3300005335 Bacteria 2817
7 Ga0070682_100005704 3300005337 Bacteria 6938
8 Ga0070682_100028018 3300005337 Bacteria 3385
9 Ga0070689_100000018 3300005340 Bacteria 153256
10 Ga0070673_100002733 3300005364 Bacteria 10831
11 Ga0070701_10010231 3300005438 Bacteria 4139
12 Ga0070681_10174502 3300005458 Unclassified 2071
13 Ga0068867_100011989 3300005459 Bacteria 6124
14 Ga0070706_100050880 3300005467 Bacteria 3823
15 Ga0070707_100114549 3300005468 Bacteria 2616
16 Ga0070679_100000825 3300005530 Bacteria 26932
17 Ga0068853_100009083 3300005539 Bacteria 8003
18 Ga0068856_100041276 3300005614 Bacteria 4534
19 Ga0068852_100069987 3300005616 Bacteria 3077
20 Ga0068859_100009762 3300005617 Bacteria 9695
21 Ga0068861_100037686 3300005719 Bacteria 3595
22 Ga0068860_100164041 3300005843 Bacteria 2144
23 Ga0097620_100009762 3300006931 Bacteria 9695
24 Ga0105240_10000766 3300009093 Bacteria 58387
25 Ga0105240_10245020 3300009093 Bacteria 2076
26 Ga0111539_10032377 3300009094 Bacteria 6349
27 Ga0105237_10001846 3300009545 Bacteria 27223
28 Ga0105237_10061562 3300009545 Bacteria 3752
29 Ga0105238_10011543 3300009551 Bacteria 8901
30 Ga0105238_10015977 3300009551 Bacteria 7595
31 Ga0207707_10153053 3300025912 Bacteria 2016
32 Ga0207695_10071786 3300025913 Bacteria 3535
33 Ga0207671_10000629 3300025914 Bacteria 46371
34 Ga0207660_10024064 3300025917 Bacteria 4119
35 Ga0207652_10002473 3300025921 Bacteria 15567
36 Ga0207652_10131502 3300025921 Bacteria 2232
37 Ga0207646_10163701 3300025922 Bacteria 2008
38 Ga0207694_10110716 3300025924 Bacteria 2184
39 Ga0207670_10000001 3300025936 Bacteria 949312
40 Ga0207661_10015032 3300025944 Bacteria 5685
41 Ga0207651_10001788 3300025960 Bacteria 9991
42 Ga0207639_10004829 3300026041 Bacteria 9091
43 Ga0207702_10056543 3300026078 Bacteria 3331
44 Ga0207675_100071828 3300026118 Bacteria 3236
45 Ga0207698_10026099 3300026142 Unclassified 4129
46 Ga0207428_10011883 3300027907 Bacteria 7668
47 Ga0265337_1002350 3300028556 Bacteria 8749
48 Ga0265337_1010423 3300028556 Bacteria 3256
49 Ga0265337_1020049 3300028556 Bacteria 2099
50 Ga0265319_1001861 3300028563 Bacteria 12021
51 Ga0265319_1008055 3300028563 Bacteria 4659
52 Ga0265319_1022426 3300028563 Bacteria 2302
53 Ga0265318_10000988 3300028577 Bacteria 18238
54 Ga0265318_10001560 3300028577 Bacteria 13311
55 Ga0265323_10002123 3300028653 Bacteria 9241
56 Ga0265323_10013286 3300028653 Bacteria 3287
57 Ga0265322_10006051 3300028654 Bacteria 3569
58 Ga0307515_10098496 3300028794 Unclassified 3560
59 Ga0265338_10010355 3300028800 Bacteria 10949
60 Ga0265338_10026177 3300028800 Bacteria 5894
61 Ga0265324_10000038 3300029957 Bacteria 119212
62 Ga0265324_10023004 3300029957 Bacteria 2223
63 Ga0265330_10000053 3300031235 Bacteria 101473
64 Ga0265330_10000118 3300031235 Bacteria 63947
65 Ga0265330_10001698 3300031235 Bacteria 12454
66 Ga0265330_10007391 3300031235 Bacteria 5356
67 Ga0265330_10009256 3300031235 Bacteria 4690
68 Ga0265330_10017265 3300031235 Bacteria 3326
69 Ga0265330_10019325 3300031235 Bacteria 3124
70 Ga0265330_10021488 3300031235 Bacteria 2944
71 Ga0265332_10000274 3300031238 Bacteria 40638
72 Ga0265332_10000907 3300031238 Bacteria 17776
73 Ga0265332_10009301 3300031238 Bacteria 4391
74 Ga0265328_10002378 3300031239 Bacteria 8449
75 Ga0265328_10004920 3300031239 Bacteria 5755
76 Ga0265320_10000006 3300031240 Bacteria 333442
77 Ga0265320_10000047 3300031240 Bacteria 119373
78 Ga0265320_10001064 3300031240 Bacteria 20324
79 Ga0265320_10006282 3300031240 Bacteria 7509
80 Ga0265320_10011302 3300031240 Bacteria 5260
81 Ga0265320_10048337 3300031240 Bacteria 2077
82 Ga0265320_10065311 3300031240 Bacteria 1727
83 Ga0265325_10001235 3300031241 Bacteria 18230
84 Ga0265325_10043969 3300031241 Bacteria 2328
85 Ga0265329_10000310 3300031242 Bacteria 25910
86 Ga0265329_10001733 3300031242 Bacteria 10425
87 Ga0265329_10003411 3300031242 Bacteria 6930
88 Ga0265340_10000894 3300031247 Bacteria 16889
89 Ga0265339_10000039 3300031249 Bacteria 120661
90 Ga0265339_10004824 3300031249 Bacteria 9117
91 Ga0265339_10053576 3300031249 Bacteria 2194
92 Ga0265339_10061815 3300031249 Bacteria 2014
93 Ga0265331_10000004 3300031250 Bacteria 476985
94 Ga0265331_10001568 3300031250 Bacteria 16726
95 Ga0265331_10002102 3300031250 Bacteria 13737
96 Ga0265327_10000032 3300031251 Bacteria 318763
97 Ga0265316_10000476 3300031344 Bacteria 45632
98 Ga0265316_10002813 3300031344 Bacteria 17795
99 Ga0265316_10002920 3300031344 Bacteria 17492
100 Ga0265316_10003946 3300031344 Bacteria 14867
101 Ga0265316_10011061 3300031344 Bacteria 8175
102 Ga0265316_10014559 3300031344 Bacteria 6914
103 Ga0265316_10016950 3300031344 Bacteria 6307
104 Ga0265316_10036405 3300031344 Bacteria 3980
105 Ga0265316_10061431 3300031344 Bacteria 2918
106 Ga0265313_10000217 3300031595 Bacteria 61945
107 Ga0265313_10006397 3300031595 Bacteria 8351
108 Ga0265313_10038606 3300031595 Bacteria 2376
109 Ga0307508_10000116 3300031616 Bacteria 94844
110 Ga0316575_10032982 3300031665 Bacteria 2030
111 Ga0265314_10000014 3300031711 Bacteria 400363
112 Ga0265314_10000155 3300031711 Bacteria 103216
113 Ga0265314_10004629 3300031711 Bacteria 12671
114 Ga0265314_10016293 3300031711 Bacteria 5876
115 Ga0265314_10020374 3300031711 Bacteria 5120
116 Ga0265314_10027641 3300031711 Bacteria 4246
117 Ga0265314_10055631 3300031711 Bacteria 2729
118 Ga0265342_10000126 3300031712 Bacteria 84944
119 Ga0265342_10001418 3300031712 Bacteria 22391
120 Ga0265342_10006883 3300031712 Bacteria 8401
121 Ga0265342_10007651 3300031712 Bacteria 7869
122 Ga0265342_10012322 3300031712 Bacteria 5794
123 Ga0265342_10012702 3300031712 Bacteria 5693
124 Ga0265342_10019570 3300031712 Bacteria 4360
125 Ga0265342_10024838 3300031712 Bacteria 3777
126 Ga0265342_10039979 3300031712 Bacteria 2846
127 Ga0316576_10057848 3300031727 Bacteria 2834
128 Ga0316576_10126015 3300031727 Bacteria 1924
129 Ga0316576_10180528 3300031727 Unclassified 1592
130 Ga0316578_10035360 3300031728 Bacteria 2871
131 Ga0316577_10056280 3300031733 Bacteria 2195
132 Ga0316580_10014924 3300032139 Bacteria 2374
133 Ga0316592_1008558 3300033524 Bacteria 2027
134 Ga0316596_1000822 3300033541 Bacteria 5767
135 Ga0373950_0000210 3300034818 Bacteria 7995
136 Ga0316574_0021683 3300035398 Bacteria 3817
137 Ga0373933_0017642 3300035724 Bacteria 4005
138 Ga0316584_0023710 3300036712 Bacteria 4484
139 Ga0316584_0025023 3300036712 Bacteria 4375
140 Ga0316584_0066154 3300036712 Bacteria 2708
141 Ga0373925_0010685 3300037068 Bacteria 6657
142 Ga0373925_0062203 3300037068 Bacteria 2807
143 Ga0451577_0000177 3300042876 Bacteria 140523
144 Ga0451577_0002921 3300042876 Bacteria 19593
145 Ga0451577_0011165 3300042876 Bacteria 8520
146 Ga0466969_0004546 3300044656 Bacteria 7386
147 Ga0453683_0000016 3300044673 Bacteria 310845
148 Ga0453683_0000175 3300044673 Bacteria 89256
149 Ga0453683_0001076 3300044673 Bacteria 25264
150 Ga0453683_0002979 3300044673 Bacteria 12699
151 Ga0453683_0004504 3300044673 Bacteria 9871
152 Ga0453683_0014174 3300044673 Bacteria 5181
153 Ga0453684_0000560 3300044712 Bacteria 140195
154 Ga0453684_0015082 3300044712 Bacteria 12263
155 Ga0453684_0016899 3300044712 Bacteria 11354
156 Ga0453684_0029836 3300044712 Bacteria 7727
157 Ga0453684_0091033 3300044712 Bacteria 3767
158 Ga0451576_0000011 3300045051 Bacteria 676436
159 Ga0451576_0000895 3300045051 Bacteria 56654
160 Ga0451576_0001066 3300045051 Bacteria 50351
161 Ga0451576_0021702 3300045051 Bacteria 6974
162 Ga0451576_0077118 3300045051 Bacteria 3468
163 Ga0495662_0026829 3300046476 Bacteria 2782
164 Ga0495594_0086219 3300046499 Bacteria 1757
165 Ga0495630_0000009 3300046517 Bacteria 305799
166 Ga0495630_0005011 3300046517 Bacteria 9317
167 Ga0495586_0037317 3300046535 Bacteria 2609
168 Ga0495634_0004482 3300046642 Bacteria 10958
169 Ga0495636_0013738 3300047318 Bacteria 3214
170 Ga0496104_0099293 3300048907 Bacteria 2787
171 Ga0496108_0044408 3300048911 Bacteria 3710
172 Ga0496112_0026842 3300048915 Bacteria 5549
173 Ga0496114_0009809 3300048917 Bacteria 7610
174 Ga0496114_0063793 3300048917 Bacteria 3084
175 Ga0496115_0021815 3300048918 Bacteria 4951
176 Ga0501034_0013691 3300049571 Bacteria 8341
177 Ga0501043_0161918 3300049579 Bacteria 1748
178 Ga0501070_0000057 3300049586 Bacteria 96353
179 Ga0501070_0049243 3300049586 Bacteria 3499
180 Ga0501077_0020686 3300049593 Bacteria 4166
181 Ga0501080_0021038 3300049742 Bacteria 6038
182 Ga0501080_0074169 3300049742 Bacteria 3165
183 Ga0501083_0037943 3300049744 Bacteria 3277
184 Ga0501035_0083541 3300049822 Bacteria 2817
185 Ga0501044_0025425 3300049823 Bacteria 6275
186 nmdc:mga06r32_219540_c1 3300050510 Bacteria 1889
187 nmdc:mga08y16_6390_c1 3300050511 Bacteria 12354
188 Ga0501082_0005292 3300060353 Bacteria 11221
189 Ga0501082_0100460 3300060353 Bacteria 2502
190 Ga0307508_10005942
191 rootH2_10002582
192 rootL2_10157694
193 Ga0070658_10000480
194 Ga0070670_100006488
195 Ga0070666_10049801
196 Ga0070682_100005704
197 Ga0070682_100028018
198 Ga0070689_100000018
199 Ga0070673_100002733
200 Ga0070701_10010231
201 Ga0070681_10174502
202 Ga0068867_100011989
203 Ga0070706_100050880
204 Ga0070707_100114549
205 Ga0070679_100000825
206 Ga0068853_100009083
207 Ga0068856_100041276
208 Ga0068852_100069987
209 Ga0068859_100009762
210 Ga0068861_100037686
211 Ga0068860_100164041
212 Ga0097620_100009762
213 Ga0105240_10000766
214 Ga0105240_10245020
215 Ga0111539_10032377
216 Ga0105237_10001846
217 Ga0105237_10061562
218 Ga0105238_10011543
219 Ga0105238_10015977
220 Ga0207707_10153053
221 Ga0207695_10071786
222 Ga0207671_10000629
223 Ga0207660_10024064
224 Ga0207652_10002473
225 Ga0207652_10131502
226 Ga0207646_10163701
227 Ga0207694_10110716
228 Ga0207670_10000001
229 Ga0207661_10015032
230 Ga0207651_10001788
231 Ga0207639_10004829
232 Ga0207702_10056543
233 Ga0207675_100071828
234 Ga0207698_10026099
235 Ga0207428_10011883
236 Ga0265337_1002350
237 Ga0265337_1010423
238 Ga0265337_1020049
239 Ga0265319_1001861
240 Ga0265319_1008055
241 Ga0265319_1022426
242 Ga0265318_10000988
243 Ga0265318_10001560
244 Ga0265323_10002123
245 Ga0265323_10013286
246 Ga0265322_10006051
247 Ga0307515_10098496
248 Ga0265338_10010355
249 Ga0265338_10026177
250 Ga0265324_10000038
251 Ga0265324_10023004
252 Ga0265330_10000053
253 Ga0265330_10000118
254 Ga0265330_10001698
255 Ga0265330_10007391
256 Ga0265330_10009256
257 Ga0265330_10017265
258 Ga0265330_10019325
259 Ga0265330_10021488
260 Ga0265332_10000274
261 Ga0265332_10000907
262 Ga0265332_10009301
263 Ga0265328_10002378
264 Ga0265328_10004920
265 Ga0265320_10000006
266 Ga0265320_10000047
267 Ga0265320_10001064
268 Ga0265320_10006282
269 Ga0265320_10011302
270 Ga0265320_10048337
271 Ga0265320_10065311
272 Ga0265325_10001235
273 Ga0265325_10043969
274 Ga0265329_10000310
275 Ga0265329_10001733
276 Ga0265329_10003411
277 Ga0265340_10000894
278 Ga0265339_10000039
279 Ga0265339_10004824
280 Ga0265339_10053576
281 Ga0265339_10061815
282 Ga0265331_10000004
283 Ga0265331_10001568
284 Ga0265331_10002102
285 Ga0265327_10000032
286 Ga0265316_10000476
287 Ga0265316_10002813
288 Ga0265316_10002920
289 Ga0265316_10003946
290 Ga0265316_10011061
291 Ga0265316_10014559
292 Ga0265316_10016950
293 Ga0265316_10036405
294 Ga0265316_10061431
295 Ga0265313_10000217
296 Ga0265313_10006397
297 Ga0265313_10038606
298 Ga0307508_10000116
299 Ga0316575_10032982
300 Ga0265314_10000014
301 Ga0265314_10000155
302 Ga0265314_10004629
303 Ga0265314_10016293
304 Ga0265314_10020374
305 Ga0265314_10027641
306 Ga0265314_10055631
307 Ga0265342_10000126
308 Ga0265342_10001418
309 Ga0265342_10006883
310 Ga0265342_10007651
311 Ga0265342_10012322
312 Ga0265342_10012702
313 Ga0265342_10019570
314 Ga0265342_10024838
315 Ga0265342_10039979
316 Ga0316576_10057848
317 Ga0316576_10126015
318 Ga0316576_10180528
319 Ga0316578_10035360
320 Ga0316577_10056280
321 Ga0316580_10014924
322 Ga0316592_1008558
323 Ga0316596_1000822
324 Ga0373950_0000210
325 Ga0316574_0021683
326 Ga0373933_0017642
327 Ga0316584_0023710
328 Ga0316584_0025023
329 Ga0316584_0066154
330 Ga0373925_0010685
331 Ga0373925_0062203
332 Ga0451577_0000177
333 Ga0451577_0002921
334 Ga0451577_0011165
335 Ga0466969_0004546
336 Ga0453683_0000016
337 Ga0453683_0000175
338 Ga0453683_0001076
339 Ga0453683_0002979
340 Ga0453683_0004504
341 Ga0453683_0014174
342 Ga0453684_0000560
343 Ga0453684_0015082
344 Ga0453684_0016899
345 Ga0453684_0029836
346 Ga0453684_0091033
347 Ga0451576_0000011
348 Ga0451576_0000895
349 Ga0451576_0001066
350 Ga0451576_0021702
351 Ga0451576_0077118
352 Ga0495662_0026829
353 Ga0495594_0086219
354 Ga0495630_0000009
355 Ga0495630_0005011
356 Ga0495586_0037317
357 Ga0495634_0004482
358 Ga0495636_0013738
359 Ga0496104_0099293
360 Ga0496108_0044408
361 Ga0496112_0026842
362 Ga0496114_0009809
363 Ga0496114_0063793
364 Ga0496115_0021815
365 Ga0501034_0013691
366 Ga0501043_0161918
367 Ga0501070_0000057
368 Ga0501070_0049243
369 Ga0501077_0020686
370 Ga0501080_0021038
371 Ga0501080_0074169
372 Ga0501083_0037943
373 Ga0501035_0083541
374 Ga0501044_0025425
375 nmdc:mga06r32_219540_c1
376 nmdc:mga08y16_6390_c1
377 Ga0501082_0005292
378 Ga0501082_0100460

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08323

Glyco_transf_5

Starch synthase catalytic domain

4

242

0.93

PF00534

Glycos_transf_1

Glycosyl transferases group 1

290

461

0.82

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

297

443

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cx4-assembly1.cif.gz_A crystal structure of e.coli gs mutant e377a in complex with adp and oligosaccharides 0.9435 4 482
3cx4-assembly1.cif.gz_A crystal structure of e.coli gs mutant e377a in complex with adp and oligosaccharides 0.9397 4 482
2r4t-assembly1.cif.gz_A crystal structure of wild-type e.coli gs in complex with adp and glucose(wtgsc) 0.9395 4 482
6gne-assembly1.cif.gz_A catalytic domain of starch synthase iv from arabidopsis thaliana bound to adp and acarbose 0.9378 2 485
2r4t-assembly1.cif.gz_A crystal structure of wild-type e.coli gs in complex with adp and glucose(wtgsc) 0.9338 4 482
ID Description Score Start End Superfamily
3copA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9669 257 465 3.40.50.2000
af_Q0DEC8_405_613_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9658 257 462 3.40.50.2000
3copA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9579 257 465 3.40.50.2000
1rzvB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9496 257 460 3.40.50.2000
af_A0A1D6HXP2_355_499_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9488 257 401 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A3M0WZG0-F1-model_v4 starch synthase (EC 2.4.1.21) 0.9742 78 487 GO:0004373
GO:0005978
GO:0009011
AF-A0A534M3C6-F1-model_v4 Glycogen synthase 0.9696 4 420 GO:0004373
AF-A0A447UM04-F1-model_v4 Glycogen synthase (EC 2.4.1.21) 0.9689 281 446 GO:0005829
GO:0005978
GO:0009011
AF-A0A2J6X656-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9685 242 482 GO:0016757
AF-A0A521S825-F1-model_v4 Glycogen synthase (EC 2.4.1.21) (Starch [bacterial glycogen] synthase) 0.9683 4 489 GO:0004373
GO:0005978
GO:0009011

Map