F291152

General Info

Members Datasets Scaffolds Average Seq Length
189 94 378 228

Family's Representative Sequence

Representative Sequence 3300031090|Ga0265760_10013035|Ga0265760_100130352
Length 236
Sequence MNNAATKIVVSLSGGMDSSVCAALAVHNYGAEQVAALHISYGQRTEAREQTAFLGICERLGIYRRLIVRTPFFRLIGGSALTDDQIAVPEAGPDIGAHIPVTYVPFRNAHFLSAAVSWAEVLGAEVIYIGAVQQDSSGYPDCRPEFYQAFNQAVRTGTKEGRIQIETPLIALRKSQIVMRGLELGAPFDLTWSCYSRDDQACGSCDSCILRLRAFAAAGAVDPIPYLSQDVVQDFS

Samples

Sample ID Description Type Environment
1 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
33 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
36 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
37 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
38 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
59 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
62 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
63 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
64 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
65 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
66 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
67 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
68 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
69 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
70 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
71 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
72 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
73 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
74 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
75 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
79 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
84 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
85 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
86 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
87 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
88 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
89 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
90 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
91 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
92 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.35
Metatranscriptomes 2.65
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.59
Rhizosphere 95.24
Stem 0
Stem Tuber 0
Unclassified 26.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265760_10013035 3300031090 Bacteria 2380
2 Ga0068869_100003349 3300005334 Bacteria 9778
3 Ga0068868_100134077 3300005338 Bacteria 2029
4 Ga0070709_10000618 3300005434 Bacteria 20370
5 Ga0070709_10028469 3300005434 Bacteria 3332
6 Ga0070709_10031424 3300005434 Bacteria 3193
7 Ga0070709_10103624 3300005434 Bacteria 1900
8 Ga0070709_10182121 3300005434 Bacteria 1476
9 Ga0070709_10634111 3300005434 Unclassified 826
10 Ga0070714_100000427 3300005435 Bacteria 30642
11 Ga0070714_100231709 3300005435 Bacteria 1702
12 Ga0070713_100000108 3300005436 Bacteria 53977
13 Ga0070713_100002095 3300005436 Bacteria 12894
14 Ga0070713_100003749 3300005436 Bacteria 10058
15 Ga0070713_100026867 3300005436 Unclassified 4526
16 Ga0070713_100126830 3300005436 Unclassified 2246
17 Ga0070713_100192913 3300005436 Bacteria 1837
18 Ga0070713_100421427 3300005436 Bacteria 1250
19 Ga0070713_100564234 3300005436 Unclassified 1079
20 Ga0070710_10026551 3300005437 Bacteria 3078
21 Ga0070710_10063897 3300005437 Unclassified 2104
22 Ga0070711_100000476 3300005439 Bacteria 20852
23 Ga0070711_100178796 3300005439 Unclassified 1623
24 Ga0070708_100000885 3300005445 Bacteria 22655
25 Ga0070708_100001514 3300005445 Bacteria 17745
26 Ga0070708_100021159 3300005445 Bacteria 5495
27 Ga0070708_100028379 3300005445 Bacteria 4815
28 Ga0070708_100260397 3300005445 Bacteria 1630
29 Ga0070708_100453796 3300005445 Bacteria 1209
30 Ga0070708_100460722 3300005445 Bacteria 1199
31 Ga0070681_10004812 3300005458 Bacteria 12940
32 Ga0070706_100000792 3300005467 Bacteria 35324
33 Ga0070706_100028809 3300005467 Bacteria 5115
34 Ga0070706_100052631 3300005467 Bacteria 3757
35 Ga0070706_100630814 3300005467 Unclassified 995
36 Ga0070707_100050793 3300005468 Bacteria 3975
37 Ga0070707_100067901 3300005468 Bacteria 3430
38 Ga0070707_100217604 3300005468 Unclassified 1861
39 Ga0070707_100565520 3300005468 Bacteria 1099
40 Ga0070698_100001464 3300005471 Bacteria 26208
41 Ga0070698_100004681 3300005471 Bacteria 15034
42 Ga0070698_100416857 3300005471 Bacteria 1277
43 Ga0070699_100000157 3300005518 Bacteria 64279
44 Ga0070699_100021853 3300005518 Bacteria 5515
45 Ga0070699_100070271 3300005518 Bacteria 3043
46 Ga0070699_100085835 3300005518 Bacteria 2747
47 Ga0070699_100622049 3300005518 Bacteria 985
48 Ga0070684_100316746 3300005535 Unclassified 1433
49 Ga0070697_100000283 3300005536 Bacteria 41017
50 Ga0070697_100001265 3300005536 Bacteria 19087
51 Ga0070697_100011237 3300005536 Bacteria 6998
52 Ga0070697_100117828 3300005536 Bacteria 2218
53 Ga0070697_100120819 3300005536 Bacteria 2191
54 Ga0070693_100250760 3300005547 Unclassified 1173
55 Ga0068855_100190587 3300005563 Unclassified 2313
56 Ga0068856_100002790 3300005614 Bacteria 17880
57 Ga0068856_100370216 3300005614 Unclassified 1452
58 Ga0068862_100747985 3300005844 Unclassified 951
59 Ga0070717_10002304 3300006028 Bacteria 13401
60 Ga0070717_10002333 3300006028 Bacteria 13356
61 Ga0070717_10008127 3300006028 Bacteria 7829
62 Ga0070717_10019126 3300006028 Bacteria 5365
63 Ga0070717_10020580 3300006028 Bacteria 5191
64 Ga0070717_10020718 3300006028 Bacteria 5177
65 Ga0070717_10048110 3300006028 Bacteria 3497
66 Ga0070717_10392187 3300006028 Bacteria 1246
67 Ga0070717_10424196 3300006028 Bacteria 1196
68 Ga0070715_10025066 3300006163 Bacteria 2358
69 Ga0070716_100002903 3300006173 Bacteria 7983
70 Ga0070712_100000212 3300006175 Bacteria 32865
71 Ga0070712_100006953 3300006175 Bacteria 7053
72 Ga0070712_100162207 3300006175 Bacteria 1727
73 Ga0070712_100173137 3300006175 Bacteria 1676
74 Ga0068865_100074574 3300006881 Bacteria 2416
75 Ga0105240_10898886 3300009093 Unclassified 953
76 Ga0105241_10161302 3300009174 Unclassified 1843
77 Ga0105237_10015288 3300009545 Bacteria 7994
78 Ga0105237_10530620 3300009545 Bacteria 1184
79 Ga0099796_10024045 3300010159 Bacteria 1909
80 Ga0099796_10186289 3300010159 Unclassified 835
81 Ga0157374_10006985 3300013296 Bacteria 9609
82 Ga0157372_10413627 3300013307 Unclassified 1571
83 Ga0182008_10185367 3300014497 Unclassified 1054
84 Ga0213873_10075118 3300021358 Unclassified 937
85 Ga0213876_10188676 3300021384 Bacteria 1096
86 Ga0224569_100004 3300022732 Bacteria 14022
87 Ga0224572_1001131 3300024225 Bacteria 3782
88 Ga0224572_1005208 3300024225 Bacteria 2308
89 Ga0228598_1000797 3300024227 Bacteria 6782
90 Ga0207692_10004699 3300025898 Bacteria 5420
91 Ga0207692_10075593 3300025898 Unclassified 1787
92 Ga0207699_10003573 3300025906 Bacteria 7428
93 Ga0207699_10085794 3300025906 Unclassified 1965
94 Ga0207699_10124863 3300025906 Unclassified 1670
95 Ga0207699_10279227 3300025906 Bacteria 1160
96 Ga0207699_10381619 3300025906 Unclassified 1000
97 Ga0207684_10000081 3300025910 Bacteria 178619
98 Ga0207684_10024702 3300025910 Bacteria 5124
99 Ga0207684_10267198 3300025910 Bacteria 1476
100 Ga0207707_10002948 3300025912 Bacteria 15153
101 Ga0207695_10061157 3300025913 Bacteria 3894
102 Ga0207671_10063787 3300025914 Unclassified 2738
103 Ga0207693_10000042 3300025915 Bacteria 104665
104 Ga0207693_10009583 3300025915 Bacteria 7887
105 Ga0207693_10012556 3300025915 Bacteria 6842
106 Ga0207693_10085835 3300025915 Bacteria 2466
107 Ga0207663_10007131 3300025916 Bacteria 5776
108 Ga0207646_10000564 3300025922 Bacteria 48766
109 Ga0207646_10001212 3300025922 Bacteria 32439
110 Ga0207646_10060182 3300025922 Bacteria 3392
111 Ga0207646_10125283 3300025922 Bacteria 2310
112 Ga0207646_10277582 3300025922 Unclassified 1514
113 Ga0207646_10529366 3300025922 Bacteria 1061
114 Ga0207650_10140263 3300025925 Bacteria 1900
115 Ga0207700_10011196 3300025928 Bacteria 5709
116 Ga0207700_10059468 3300025928 Unclassified 2890
117 Ga0207700_10091298 3300025928 Unclassified 2405
118 Ga0207700_10200858 3300025928 Bacteria 1680
119 Ga0207700_10379661 3300025928 Unclassified 1236
120 Ga0207700_10470920 3300025928 Unclassified 1109
121 Ga0207664_10000456 3300025929 Bacteria 29054
122 Ga0207664_10215048 3300025929 Unclassified 1665
123 Ga0207704_10046545 3300025938 Unclassified 2586
124 Ga0207665_10002977 3300025939 Bacteria 11360
125 Ga0207665_10272434 3300025939 Bacteria 1257
126 Ga0207689_10001186 3300025942 Bacteria 25050
127 Ga0207702_10000536 3300026078 Bacteria 42507
128 Ga0207648_10071094 3300026089 Unclassified 3033
129 Ga0265336_10012825 3300028666 Bacteria 2810
130 Ga0265338_10000863 3300028800 Bacteria 51343
131 Ga0265338_10052341 3300028800 Unclassified 3664
132 Ga0265338_10068893 3300028800 Bacteria 3044
133 Ga0265338_10272262 3300028800 Unclassified 1240
134 Ga0265762_1022835 3300030760 Bacteria 1158
135 Ga0265770_1028991 3300030878 Bacteria 917
136 Ga0265760_10000557 3300031090 Bacteria 10562
137 Ga0265760_10026859 3300031090 Bacteria 1686
138 Ga0265330_10002515 3300031235 Bacteria 9961
139 Ga0265325_10043425 3300031241 Bacteria 2346
140 Ga0265325_10081256 3300031241 Unclassified 1611
141 Ga0265340_10073817 3300031247 Bacteria 1614
142 Ga0265339_10042726 3300031249 Bacteria 2509
143 Ga0265316_10024210 3300031344 Bacteria 5093
144 Ga0265316_10057432 3300031344 Unclassified 3035
145 Ga0265314_10014311 3300031711 Bacteria 6358
146 Ga0265314_10024433 3300031711 Bacteria 4582
147 Ga0265342_10087017 3300031712 Bacteria 1796
148 Ga0316214_1006426 3300033545 Bacteria 1553
149 Ga0373934_0005365 3300035086 Bacteria 4748
150 Ga0373945_0001328 3300035116 Bacteria 7506
151 Ga0373943_0000024 3300035170 Bacteria 51188
152 Ga0373943_0252344 3300035170 Unclassified 991
153 Ga0373946_0003847 3300035171 Bacteria 5331
154 Ga0373924_0042027 3300035410 Unclassified 1874
155 Ga0373924_0118992 3300035410 Unclassified 1145
156 Ga0373935_0372147 3300035692 Unclassified 1022
157 Ga0373927_0000527 3300035695 Bacteria 29019
158 Ga0373933_0203893 3300035724 Bacteria 1266
159 Ga0373947_0005965 3300035725 Bacteria 7099
160 Ga0373947_0325984 3300035725 Bacteria 1028
161 Ga0373937_0318847 3300036401 Unclassified 1470
162 Ga0373937_0556112 3300036401 Unclassified 1090
163 Ga0373925_0006490 3300037068 Bacteria 8601
164 Ga0373925_0279696 3300037068 Bacteria 1344
165 Ga0373925_0545925 3300037068 Bacteria 953
166 Ga0395905_0401978 3300037471 Unclassified 1265
167 Ga0436364_0781367 3300037853 Unclassified 805
168 Ga0436365_0431629 3300039437 Bacteria 2200
169 Ga0436365_0904673 3300039437 Bacteria 2500
170 Ga0436365_1071429 3300039437 Unclassified 828
171 Ga0436362_0066512 3300039453 Bacteria 5322
172 Ga0495651_0222976 3300046462 Bacteria 1304
173 Ga0495580_0024998 3300046472 Bacteria 4367
174 Ga0495580_0038154 3300046472 Bacteria 3443
175 Ga0495580_0288289 3300046472 Bacteria 1119
176 Ga0495628_0090722 3300046516 Unclassified 2366
177 Ga0495630_0103316 3300046517 Unclassified 2156
178 Ga0495630_0257279 3300046517 Unclassified 1334
179 Ga0495669_0112424 3300046684 Bacteria 1272
180 Ga0495624_0067133 3300046690 Bacteria 2238
181 Ga0495674_0010065 3300047319 Bacteria 8964
182 Ga0495674_0234765 3300047319 Unclassified 1513
183 Ga0495676_0058038 3300047321 Bacteria 3048
184 Ga0495602_0134289 3300048088 Unclassified 1968
185 Ga0496112_0108161 3300048915 Bacteria 2751
186 Ga0496112_0440480 3300048915 Unclassified 1241
187 Ga0496115_0053173 3300048918 Bacteria 3250
188 Ga0501044_0579235 3300049823 Bacteria 1017
189 Ga0495612_0252883 3300053078 Bacteria 784
190 Ga0265760_10013035
191 Ga0068869_100003349
192 Ga0068868_100134077
193 Ga0070709_10000618
194 Ga0070709_10028469
195 Ga0070709_10031424
196 Ga0070709_10103624
197 Ga0070709_10182121
198 Ga0070709_10634111
199 Ga0070714_100000427
200 Ga0070714_100231709
201 Ga0070713_100000108
202 Ga0070713_100002095
203 Ga0070713_100003749
204 Ga0070713_100026867
205 Ga0070713_100126830
206 Ga0070713_100192913
207 Ga0070713_100421427
208 Ga0070713_100564234
209 Ga0070710_10026551
210 Ga0070710_10063897
211 Ga0070711_100000476
212 Ga0070711_100178796
213 Ga0070708_100000885
214 Ga0070708_100001514
215 Ga0070708_100021159
216 Ga0070708_100028379
217 Ga0070708_100260397
218 Ga0070708_100453796
219 Ga0070708_100460722
220 Ga0070681_10004812
221 Ga0070706_100000792
222 Ga0070706_100028809
223 Ga0070706_100052631
224 Ga0070706_100630814
225 Ga0070707_100050793
226 Ga0070707_100067901
227 Ga0070707_100217604
228 Ga0070707_100565520
229 Ga0070698_100001464
230 Ga0070698_100004681
231 Ga0070698_100416857
232 Ga0070699_100000157
233 Ga0070699_100021853
234 Ga0070699_100070271
235 Ga0070699_100085835
236 Ga0070699_100622049
237 Ga0070684_100316746
238 Ga0070697_100000283
239 Ga0070697_100001265
240 Ga0070697_100011237
241 Ga0070697_100117828
242 Ga0070697_100120819
243 Ga0070693_100250760
244 Ga0068855_100190587
245 Ga0068856_100002790
246 Ga0068856_100370216
247 Ga0068862_100747985
248 Ga0070717_10002304
249 Ga0070717_10002333
250 Ga0070717_10008127
251 Ga0070717_10019126
252 Ga0070717_10020580
253 Ga0070717_10020718
254 Ga0070717_10048110
255 Ga0070717_10392187
256 Ga0070717_10424196
257 Ga0070715_10025066
258 Ga0070716_100002903
259 Ga0070712_100000212
260 Ga0070712_100006953
261 Ga0070712_100162207
262 Ga0070712_100173137
263 Ga0068865_100074574
264 Ga0105240_10898886
265 Ga0105241_10161302
266 Ga0105237_10015288
267 Ga0105237_10530620
268 Ga0099796_10024045
269 Ga0099796_10186289
270 Ga0157374_10006985
271 Ga0157372_10413627
272 Ga0182008_10185367
273 Ga0213873_10075118
274 Ga0213876_10188676
275 Ga0224569_100004
276 Ga0224572_1001131
277 Ga0224572_1005208
278 Ga0228598_1000797
279 Ga0207692_10004699
280 Ga0207692_10075593
281 Ga0207699_10003573
282 Ga0207699_10085794
283 Ga0207699_10124863
284 Ga0207699_10279227
285 Ga0207699_10381619
286 Ga0207684_10000081
287 Ga0207684_10024702
288 Ga0207684_10267198
289 Ga0207707_10002948
290 Ga0207695_10061157
291 Ga0207671_10063787
292 Ga0207693_10000042
293 Ga0207693_10009583
294 Ga0207693_10012556
295 Ga0207693_10085835
296 Ga0207663_10007131
297 Ga0207646_10000564
298 Ga0207646_10001212
299 Ga0207646_10060182
300 Ga0207646_10125283
301 Ga0207646_10277582
302 Ga0207646_10529366
303 Ga0207650_10140263
304 Ga0207700_10011196
305 Ga0207700_10059468
306 Ga0207700_10091298
307 Ga0207700_10200858
308 Ga0207700_10379661
309 Ga0207700_10470920
310 Ga0207664_10000456
311 Ga0207664_10215048
312 Ga0207704_10046545
313 Ga0207665_10002977
314 Ga0207665_10272434
315 Ga0207689_10001186
316 Ga0207702_10000536
317 Ga0207648_10071094
318 Ga0265336_10012825
319 Ga0265338_10000863
320 Ga0265338_10052341
321 Ga0265338_10068893
322 Ga0265338_10272262
323 Ga0265762_1022835
324 Ga0265770_1028991
325 Ga0265760_10000557
326 Ga0265760_10026859
327 Ga0265330_10002515
328 Ga0265325_10043425
329 Ga0265325_10081256
330 Ga0265340_10073817
331 Ga0265339_10042726
332 Ga0265316_10024210
333 Ga0265316_10057432
334 Ga0265314_10014311
335 Ga0265314_10024433
336 Ga0265342_10087017
337 Ga0316214_1006426
338 Ga0373934_0005365
339 Ga0373945_0001328
340 Ga0373943_0000024
341 Ga0373943_0252344
342 Ga0373946_0003847
343 Ga0373924_0042027
344 Ga0373924_0118992
345 Ga0373935_0372147
346 Ga0373927_0000527
347 Ga0373933_0203893
348 Ga0373947_0005965
349 Ga0373947_0325984
350 Ga0373937_0318847
351 Ga0373937_0556112
352 Ga0373925_0006490
353 Ga0373925_0279696
354 Ga0373925_0545925
355 Ga0395905_0401978
356 Ga0436364_0781367
357 Ga0436365_0431629
358 Ga0436365_0904673
359 Ga0436365_1071429
360 Ga0436362_0066512
361 Ga0495651_0222976
362 Ga0495580_0024998
363 Ga0495580_0038154
364 Ga0495580_0288289
365 Ga0495628_0090722
366 Ga0495630_0103316
367 Ga0495630_0257279
368 Ga0495669_0112424
369 Ga0495624_0067133
370 Ga0495674_0010065
371 Ga0495674_0234765
372 Ga0495676_0058038
373 Ga0495602_0134289
374 Ga0496112_0108161
375 Ga0496112_0440480
376 Ga0496115_0053173
377 Ga0501044_0579235
378 Ga0495612_0252883

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06508

QueC

Queuosine biosynthesis protein QueC

7

219

0.96

PF02540

NAD_synthase

NAD synthase

1

86

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8385 7 217
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8223 7 217
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8169 7 217
2pg3-assembly1.cif.gz_A-2 crystal structure of a queuosine biosynthesis protein quec (eca1155) from erwinia carotovora subsp. atroseptica scri1043 at 2.40 a resolution 0.8087 8 217
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8016 7 217
ID Description Score Start End Superfamily
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8693 9 224 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8599 8 216 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8301 8 216 3.40.50.620
af_Q58240_5_163_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7836 8 184 3.40.50.620
af_Q2FXL1_175_403_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7116 9 184 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A523R4I4-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9539 6 80
AF-A0A2V8X254-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9474 148 228
AF-A0A3N5MAE1-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9368 9 82
AF-A0A3N5LNG7-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9346 103 225
AF-K1WXB5-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9333 143 226

Map