F290168

General Info

Members Datasets Scaffolds Average Seq Length
188 151 376 634

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2858902515|2858906129
Length 725
Sequence WDGARPRRGREHRRAPAPGRSPREPRGPSGDGDAGRDPGRSDRGGREPSPAARAARDPRLGGHGGPGPGAIPACVERPAPREEPAGPLRRWLFQHLVQPVGPETGEAQAKTHSWWQVMCLTGVDYFSTLSYVPGIAALAAGALSPLATLLIVALTLFGMLPMYRRVAGESPHGQGSVAMLERLLPFWRGKIFVLVLLGFVATSWIITITLSAADATVHLLENPYLPASAPHGALAAVTVTVVLLLVLGGVFLMGFSEAVTVAIPLVVVFLGLNAVIVVAGLAQIAADPGTVGDWATALTARGTGFADVVGPAVLAFPLLVLGLSGFETGVSMMPLVRGNGPDAARRLAARIRNTRRLLATAALIMSVYLVGTTFVTTVLIPAREFQPGGAANGRALAWLAHERLGEGFGTVYDVSSVLILWFAGASAMAGLINIVPRYLPSYGMAPEWGRAVRPVVIVYTLISIAITVAFRADVNAQAGAYATGILAMMVSGAVAVTIAAARARQRTAAAGFAVLTAVLIYALTENVIEKPDGIAISGMFVAGIVAVSLISRVTRTTELRAERIEFDDAARRFVAESLAHDGRLHLIANRRDSGAVKEYRVKERAQRGMNPVPGAADVLFLEIDVVDPSEFSRVLRVHGVEAGGYRVLRAASPAVPNAIAAILLALRDATGVRPHAHFEWSEGNPIAHLLRYLILGRGDTPPVVREIIRKSEPDPSRRPGIHVGG

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
19 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
20 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
26 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
27 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
38 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
39 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
40 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
41 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
42 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
43 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
44 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
45 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
46 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
47 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
51 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
52 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
53 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
58 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
59 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
60 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
61 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
62 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
65 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
66 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
67 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
68 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
69 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
70 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
73 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
74 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
75 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
76 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
77 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
83 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
84 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
85 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
86 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
87 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
88 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
89 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
90 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
91 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
92 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
93 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
94 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
95 2501939600 Micromonospora sp. L5 Isolate Unclassified
96 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
97 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
98 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
99 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
100 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
101 2643221647 Streptomyces sp. Root369 Isolate Unclassified
102 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
103 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
104 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
105 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
106 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
107 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
108 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
109 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
110 2855683550 Micromonospora sp. RP3T Isolate Unclassified
111 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
112 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
113 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
114 2858868258 Micromonospora sp. MH33 Isolate Unclassified
115 2858882152 Micromonospora noduli MED15 Isolate Nodule
116 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
117 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
118 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
119 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
120 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
121 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
122 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
123 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
124 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
125 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
126 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
127 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
128 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
129 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
130 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
131 2902582711 Micromonospora sp. AP08 Isolate Unclassified
132 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
133 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
134 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
135 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
136 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
137 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
138 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
139 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
140 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
141 649633069 Micromonospora sp. L5 Isolate Unclassified
142 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
143 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
144 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
145 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
146 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
147 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
148 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
149 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
150 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
151 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 68.09
Metatranscriptomes 0
Isolates 31.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.72
Nodule 3.19
Rhizoplane 3.72
Rhizosphere 56.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002138 3300003203 Bacteria 9341
2 Ga0070683_100000810 3300005329 Bacteria 23161
3 Ga0070683_100040345 3300005329 Bacteria 4292
4 Ga0068869_100058765 3300005334 Bacteria 2813
5 Ga0068868_100006851 3300005338 Bacteria 8094
6 Ga0070661_100053427 3300005344 Bacteria 2957
7 Ga0070675_100006394 3300005354 Bacteria 9041
8 Ga0070710_10000374 3300005437 Bacteria 20970
9 Ga0070663_100033067 3300005455 Bacteria 3570
10 Ga0070662_100014893 3300005457 Bacteria 5201
11 Ga0070684_100107459 3300005535 Bacteria 2499
12 Ga0068857_100015417 3300005577 Bacteria 6675
13 Ga0070702_100015324 3300005615 Bacteria 3913
14 Ga0068858_100019039 3300005842 Bacteria 6423
15 Ga0068862_100010658 3300005844 Bacteria 7594
16 Ga0081455_10029013 3300005937 Bacteria 5048
17 Ga0081539_10000204 3300005985 Bacteria 137351
18 Ga0081539_10001103 3300005985 Bacteria 49011
19 Ga0081539_10002010 3300005985 Bacteria 30801
20 Ga0081539_10020520 3300005985 Bacteria 4462
21 Ga0070717_10061348 3300006028 Bacteria 3116
22 Ga0075428_100000427 3300006844 Bacteria 41833
23 Ga0075430_100002021 3300006846 Bacteria 16727
24 Ga0075431_100016195 3300006847 Bacteria 7562
25 Ga0075431_100043848 3300006847 Bacteria 4613
26 Ga0075431_100073281 3300006847 Bacteria 3533
27 Ga0075429_100079320 3300006880 Bacteria 2862
28 Ga0111539_10002610 3300009094 Bacteria 23884
29 Ga0105245_10028665 3300009098 Bacteria 4913
30 Ga0114129_10000017 3300009147 Bacteria 126216
31 Ga0163162_10085449 3300013306 Bacteria 3232
32 Ga0157380_10003606 3300014326 Bacteria 10649
33 Ga0207692_10000156 3300025898 Bacteria 21661
34 Ga0207649_10002160 3300025920 Bacteria 11125
35 Ga0207652_10123102 3300025921 Bacteria 2309
36 Ga0207659_10002125 3300025926 Bacteria 11745
37 Ga0207706_10010110 3300025933 Bacteria 8640
38 Ga0207679_10002171 3300025945 Bacteria 12134
39 Ga0207668_10002205 3300025972 Bacteria 11359
40 Ga0207668_10097272 3300025972 Bacteria 2178
41 Ga0207678_10000071 3300026067 Bacteria 81112
42 Ga0207678_10029775 3300026067 Bacteria 4767
43 Ga0207674_10017033 3300026116 Bacteria 7933
44 Ga0268265_10035322 3300028380 Bacteria 3651
45 Ga0307515_10016392 3300028794 Bacteria 13563
46 Ga0307515_10046298 3300028794 Bacteria 6653
47 Ga0307515_10075679 3300028794 Bacteria 4480
48 Ga0307515_10160703 3300028794 Bacteria 2293
49 Ga0307512_10002625 3300030522 Bacteria 22257
50 Ga0307512_10005363 3300030522 Bacteria 13410
51 Ga0307512_10038894 3300030522 Bacteria 3993
52 Ga0316177_1013146 3300030731 Bacteria 5135
53 Ga0307513_10025036 3300031456 Bacteria 6925
54 Ga0307513_10113965 3300031456 Bacteria 2690
55 Ga0307508_10044526 3300031616 Bacteria 3969
56 Ga0307514_10002316 3300031649 Bacteria 20059
57 Ga0307516_10022505 3300031730 Bacteria 6470
58 Ga0307516_10056712 3300031730 Bacteria 3818
59 Ga0307516_10078347 3300031730 Bacteria 3151
60 Ga0307405_10000963 3300031731 Bacteria 11540
61 Ga0307410_10000867 3300031852 Bacteria 12887
62 Ga0307410_10071853 3300031852 Bacteria 2401
63 Ga0307406_10028184 3300031901 Bacteria 3391
64 Ga0307406_10056111 3300031901 Bacteria 2521
65 Ga0307412_10015903 3300031911 Bacteria 4470
66 Ga0307409_100013242 3300031995 Bacteria 5297
67 Ga0307409_100048986 3300031995 Bacteria 3219
68 Ga0307409_100082797 3300031995 Bacteria 2599
69 Ga0307409_100144750 3300031995 Bacteria 2053
70 Ga0307416_100000579 3300032002 Bacteria 18805
71 Ga0307416_100026077 3300032002 Bacteria 4300
72 Ga0307416_100062150 3300032002 Bacteria 3052
73 Ga0307416_100093998 3300032002 Bacteria 2584
74 Ga0307415_100000003 3300032126 Bacteria 116928
75 Ga0307415_100032749 3300032126 Bacteria 3366
76 Ga0307507_10005776 3300033179 Bacteria 19882
77 Ga0373942_0000062 3300035207 Bacteria 22455
78 Ga0373935_0004524 3300035692 Bacteria 8175
79 Ga0395900_0125371 3300037418 Bacteria 2634
80 Ga0395898_0015470 3300037466 Bacteria 7826
81 Ga0395905_0029084 3300037471 Bacteria 5208
82 Ga0395905_0051431 3300037471 Bacteria 3859
83 Ga0451833_0195420 3300041491 Bacteria 14850
84 Ga0439449_0013068 3300042007 Bacteria 3123
85 Ga0466972_0000864 3300044658 Bacteria 14543
86 Ga0466965_0000256 3300044683 Bacteria 17245
87 Ga0466965_0003974 3300044683 Bacteria 6550
88 Ga0466968_0004222 3300044735 Bacteria 5355
89 Ga0466968_0006692 3300044735 Bacteria 4355
90 Ga0466960_0041228 3300044901 Bacteria 2187
91 Ga0466967_0009777 3300045976 Bacteria 7149
92 Ga0495594_0006664 3300046499 Bacteria 5944
93 Ga0495606_0000632 3300046507 Bacteria 55347
94 Ga0495606_0005374 3300046507 Bacteria 12285
95 Ga0495625_0001114 3300046660 Bacteria 34828
96 Ga0495625_0002187 3300046660 Bacteria 21702
97 Ga0495626_0000604 3300048091 Bacteria 35052
98 Ga0495626_0001177 3300048091 Bacteria 21723
99 Ga0496101_0065900 3300048904 Bacteria 2640
100 Ga0496102_0049669 3300048905 Bacteria 3817
101 Ga0496107_0016989 3300048910 Bacteria 5116
102 Ga0496108_0000130 3300048911 Bacteria 74276
103 Ga0496110_0102916 3300048913 Bacteria 2561
104 Ga0496113_0055516 3300048916 Bacteria 2969
105 Ga0496113_0062157 3300048916 Bacteria 2820
106 Ga0496122_0001688 3300048925 Bacteria 34239
107 Ga0496123_0002197 3300048926 Bacteria 24824
108 Ga0496126_0039044 3300048929 Bacteria 4410
109 Ga0501032_0041579 3300049569 Bacteria 3120
110 Ga0501037_0034622 3300049573 Bacteria 3726
111 Ga0501038_0048274 3300049574 Bacteria 3684
112 Ga0501039_0024588 3300049575 Bacteria 4627
113 Ga0501043_0000837 3300049579 Bacteria 27360
114 Ga0501070_0001838 3300049586 Bacteria 18711
115 Ga0501073_0084047 3300049589 Bacteria 2215
116 Ga0501044_0023911 3300049823 Bacteria 6494
117 nmdc:mga0qj67_66006_c1 3300050509 Bacteria 2881
118 nmdc:mga0qj67_93194_c1 3300050509 Bacteria 2422
119 nmdc:mga06r32_41746_c1 3300050510 Bacteria 4360
120 nmdc:mga06r32_42531_c1 3300050510 Bacteria 4320
121 Ga0495655_0000665 3300053083 Bacteria 5518
122 Ga0500643_001455 3300053087 Bacteria 13635
123 Ga0500641_0016542 3300053096 Bacteria 2747
124 Ga0500556_0000129 3300053104 Bacteria 64921
125 Ga0500593_000501 3300053117 Bacteria 15491
126 Ga0500655_001758 3300053133 Bacteria 4060
127 Ga0500616_0000159 3300053153 Bacteria 111730
128 Ga0500616_0011991 3300053153 Bacteria 5090
129 2858906129 2858902515 Bacteria 7086037
130 2501941863 2501939600 Bacteria 6907073
131 2585311104 2582581313 Bacteria 10042643
132 2586060548 2585427649 Bacteria 9053857
133 2623589681 2622736626 Bacteria 7181580
134 2644134900 2643221624 Bacteria 4384879
135 2644198844 2643221635 Bacteria 2632343
136 2644269314 2643221647 Bacteria 10741251
137 2644441068 2643221678 Bacteria 9540101
138 2753268327 2751185782 Bacteria 11227053
139 2772645073 2772190715 Bacteria 6959372
140 2812361194 2811994879 Bacteria 9313447
141 2831935832 2831935698 Bacteria 5963223
142 2832010801 2832004796 Bacteria 6538017
143 2855676209 2855670206 Bacteria 7120389
144 2855681915 2855676851 Bacteria 7063653
145 2855686982 2855683550 Bacteria 7134265
146 2856863210 2856858025 Bacteria 7255264
147 2857293276 2857288857 Bacteria 7189066
148 2858850333 2858848962 Bacteria 6963058
149 2858871416 2858868258 Bacteria 7683772
150 2858882180 2858882152 Bacteria 7230291
151 2858891619 2858888857 Bacteria 7060307
152 2858895900 2858895516 Bacteria 7378898
153 2866068289 2866065130 Bacteria 6518152
154 2866616697 2866612099 Bacteria 7543886
155 2867303022 2867302475 Bacteria 7087181
156 2867318199 2867312974 Bacteria 7058875
157 2867323475 2867319477 Bacteria 7069771
158 2867511550 2867507094 Bacteria 6506033
159 2869053044 2869048445 Bacteria 6875584
160 2869063279 2869061728 Bacteria 7112407
161 2869074731 2869068681 Bacteria 7205615
162 2880491167 2880489317 Bacteria 7096270
163 2880501302 2880495981 Bacteria 7340502
164 2891404089 2891395885 Bacteria 9251614
165 2895449662 2895442618 Bacteria 11027144
166 2902583071 2902582711 Bacteria 6187705
167 2915770755 2915768154 Bacteria 8424322
168 2919473943 2919468124 Bacteria 9133025
169 2929223453 2929219909 Bacteria 6984360
170 2929229808 2929226422 Bacteria 7248583
171 2939660107 2939657138 Bacteria 3740283
172 2945960280 2945956166 Bacteria 5110334
173 2954380981 2954380949 Bacteria 10050426
174 2990089571 2990088156 Bacteria 6657676
175 2996225131 2996221748 Bacteria 6799777
176 649815022 649633069 Bacteria 6962533
177 8001782598 8001781756 Bacteria 9586736
178 8003317590 8003314358 Bacteria 10575343
179 8003322770 8003314358 Bacteria 10575343
180 8003832907 8003830390 Bacteria 6541657
181 8003833932 8003830390 Bacteria 6541657
182 8003858381 8003856774 Bacteria 7675274
183 8003877216 8003870546 Bacteria 7396674
184 8047713444 8047710418 Bacteria 11023148
185 8054706585 8054704163 Bacteria 7247792
186 8054730321 8054727385 Bacteria 7558670
187 8054737450 8054734606 Bacteria 6947278
188 8055416951 8055412473 Bacteria 6257500
189 JGI25406J46586_10002138
190 Ga0070683_100000810
191 Ga0070683_100040345
192 Ga0068869_100058765
193 Ga0068868_100006851
194 Ga0070661_100053427
195 Ga0070675_100006394
196 Ga0070710_10000374
197 Ga0070663_100033067
198 Ga0070662_100014893
199 Ga0070684_100107459
200 Ga0068857_100015417
201 Ga0070702_100015324
202 Ga0068858_100019039
203 Ga0068862_100010658
204 Ga0081455_10029013
205 Ga0081539_10000204
206 Ga0081539_10001103
207 Ga0081539_10002010
208 Ga0081539_10020520
209 Ga0070717_10061348
210 Ga0075428_100000427
211 Ga0075430_100002021
212 Ga0075431_100016195
213 Ga0075431_100043848
214 Ga0075431_100073281
215 Ga0075429_100079320
216 Ga0111539_10002610
217 Ga0105245_10028665
218 Ga0114129_10000017
219 Ga0163162_10085449
220 Ga0157380_10003606
221 Ga0207692_10000156
222 Ga0207649_10002160
223 Ga0207652_10123102
224 Ga0207659_10002125
225 Ga0207706_10010110
226 Ga0207679_10002171
227 Ga0207668_10002205
228 Ga0207668_10097272
229 Ga0207678_10000071
230 Ga0207678_10029775
231 Ga0207674_10017033
232 Ga0268265_10035322
233 Ga0307515_10016392
234 Ga0307515_10046298
235 Ga0307515_10075679
236 Ga0307515_10160703
237 Ga0307512_10002625
238 Ga0307512_10005363
239 Ga0307512_10038894
240 Ga0316177_1013146
241 Ga0307513_10025036
242 Ga0307513_10113965
243 Ga0307508_10044526
244 Ga0307514_10002316
245 Ga0307516_10022505
246 Ga0307516_10056712
247 Ga0307516_10078347
248 Ga0307405_10000963
249 Ga0307410_10000867
250 Ga0307410_10071853
251 Ga0307406_10028184
252 Ga0307406_10056111
253 Ga0307412_10015903
254 Ga0307409_100013242
255 Ga0307409_100048986
256 Ga0307409_100082797
257 Ga0307409_100144750
258 Ga0307416_100000579
259 Ga0307416_100026077
260 Ga0307416_100062150
261 Ga0307416_100093998
262 Ga0307415_100000003
263 Ga0307415_100032749
264 Ga0307507_10005776
265 Ga0373942_0000062
266 Ga0373935_0004524
267 Ga0395900_0125371
268 Ga0395898_0015470
269 Ga0395905_0029084
270 Ga0395905_0051431
271 Ga0451833_0195420
272 Ga0439449_0013068
273 Ga0466972_0000864
274 Ga0466965_0000256
275 Ga0466965_0003974
276 Ga0466968_0004222
277 Ga0466968_0006692
278 Ga0466960_0041228
279 Ga0466967_0009777
280 Ga0495594_0006664
281 Ga0495606_0000632
282 Ga0495606_0005374
283 Ga0495625_0001114
284 Ga0495625_0002187
285 Ga0495626_0000604
286 Ga0495626_0001177
287 Ga0496101_0065900
288 Ga0496102_0049669
289 Ga0496107_0016989
290 Ga0496108_0000130
291 Ga0496110_0102916
292 Ga0496113_0055516
293 Ga0496113_0062157
294 Ga0496122_0001688
295 Ga0496123_0002197
296 Ga0496126_0039044
297 Ga0501032_0041579
298 Ga0501037_0034622
299 Ga0501038_0048274
300 Ga0501039_0024588
301 Ga0501043_0000837
302 Ga0501070_0001838
303 Ga0501073_0084047
304 Ga0501044_0023911
305 nmdc:mga0qj67_66006_c1
306 nmdc:mga0qj67_93194_c1
307 nmdc:mga06r32_41746_c1
308 nmdc:mga06r32_42531_c1
309 Ga0495655_0000665
310 Ga0500643_001455
311 Ga0500641_0016542
312 Ga0500556_0000129
313 Ga0500593_000501
314 Ga0500655_001758
315 Ga0500616_0000159
316 Ga0500616_0011991
317 2858906129
318 2501941863
319 2585311104
320 2586060548
321 2623589681
322 2644134900
323 2644198844
324 2644269314
325 2644441068
326 2753268327
327 2772645073
328 2812361194
329 2831935832
330 2832010801
331 2855676209
332 2855681915
333 2855686982
334 2856863210
335 2857293276
336 2858850333
337 2858871416
338 2858882180
339 2858891619
340 2858895900
341 2866068289
342 2866616697
343 2867303022
344 2867318199
345 2867323475
346 2867511550
347 2869053044
348 2869063279
349 2869074731
350 2880491167
351 2880501302
352 2891404089
353 2895449662
354 2902583071
355 2915770755
356 2919473943
357 2929223453
358 2929229808
359 2939660107
360 2945960280
361 2954380981
362 2990089571
363 2996225131
364 649815022
365 8001782598
366 8003317590
367 8003322770
368 8003832907
369 8003833932
370 8003858381
371 8003877216
372 8047713444
373 8054706585
374 8054730321
375 8054737450
376 8055416951

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gia-assembly1.cif.gz_A crystal structure of apct transporter 0.6772 48 466
3l1l-assembly1.cif.gz_A-2 structure of arg-bound escherichia coli adic 0.6732 48 464
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.672 48 466
3ob6-assembly1.cif.gz_A structure of adic(n101a) in the open-to-out arg+ bound conformation 0.6639 46 465
3gia-assembly1.cif.gz_A crystal structure of apct transporter 0.6576 48 466
ID Description Score Start End Superfamily
af_Q4DQR3_170_606_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.737 48 465 1.20.1740.10
af_Q9LHN7_26_467_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7237 49 466 1.20.1740.10
af_Q5RKI7_10_447_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7161 49 466 1.20.1740.10
af_Q2FVI1_4_463_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7092 49 469 1.20.1740.10
af_Q4DQR3_170_606_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.7068 48 465 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A7T9GN72-F1-model_v4 deleted 0.9193 58 636
AF-A0A6L4YSS0-F1-model_v4 Amino acid transporter 0.9165 62 360 GO:0016020
AF-A0A7W1FT94-F1-model_v4 Amino acid transporter 0.9113 155 636 GO:0016020
AF-A0A175RYM2-F1-model_v4 Amino acid transporter 0.8993 19 635 GO:0016020
AF-A0A7W1FT94-F1-model_v4 Amino acid transporter 0.8973 155 636 GO:0016020

Map