F288358

General Info

Members Datasets Scaffolds Average Seq Length
187 110 374 191

Family's Representative Sequence

Representative Sequence 3300049575|Ga0501039_0457067|Ga0501039_0457067_187_852
Length 221
Sequence MVSQIEPKWRLSVLTKSRPPTSPFTQEVVMKVRRVYSVAACLALTALWFSGRQSPAIHAQTHAAPHGGSQAGGALIKVVREATERFRDVKVAEAEGYQLAFGCVSGGEYGAMGLHYVNFPLVFDGGLLDPTRPEIVIYEPLPNGGRRLIGADYLVLASDWHSKNQTPPELMGQLLHLFESPNRFGLPNFYTLHVWAWKENPTGTFVNWHAKVSCDAFDGGE

Samples

Sample ID Description Type Environment
1 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
2 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
45 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
48 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
49 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
50 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
51 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
52 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
53 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
57 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
58 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
59 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
60 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
61 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
62 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
63 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
64 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
65 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
66 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
67 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
68 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
69 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
70 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
71 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
72 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
73 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
80 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
81 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
82 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
83 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
84 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
85 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
86 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
87 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
88 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
89 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
90 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
91 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
92 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
93 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
94 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
96 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
97 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
98 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
99 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
100 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
104 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
105 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
106 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
107 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
108 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
109 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
110 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.02
Nodule 0
Rhizoplane 2.14
Rhizosphere 87.17
Stem 0
Stem Tuber 0
Unclassified 11.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501039_0457067 3300049575 Bacteria 1003
2 Ga0070677_10175329 3300005333 Bacteria 1017
3 Ga0070668_100077260 3300005347 Bacteria 2602
4 Ga0070675_100334248 3300005354 Bacteria 1341
5 Ga0070674_100005041 3300005356 Bacteria 7588
6 Ga0070674_100433710 3300005356 Bacteria 1081
7 Ga0070700_100022473 3300005441 Bacteria 3678
8 Ga0070700_100083251 3300005441 Bacteria 2071
9 Ga0070700_100297807 3300005441 Bacteria 1176
10 Ga0070694_100257130 3300005444 Bacteria 1323
11 Ga0070694_100752412 3300005444 Unclassified 796
12 Ga0068867_100286120 3300005459 Bacteria 1353
13 Ga0070685_10088397 3300005466 Bacteria 1871
14 Ga0070706_100149039 3300005467 Bacteria 2184
15 Ga0070698_100126801 3300005471 Bacteria 2509
16 Ga0070699_100002749 3300005518 Bacteria 15693
17 Ga0070672_100367960 3300005543 Bacteria 1228
18 Ga0070695_100277472 3300005545 Bacteria 1230
19 Ga0070665_100095299 3300005548 Bacteria 2981
20 Ga0070704_100041609 3300005549 Bacteria 3173
21 Ga0070704_100373071 3300005549 Bacteria 1210
22 Ga0068861_100000155 3300005719 Bacteria 35555
23 Ga0068861_100202673 3300005719 Bacteria 1666
24 Ga0068862_100680817 3300005844 Bacteria 995
25 Ga0081538_10025961 3300005981 Unclassified 4113
26 Ga0075368_10072620 3300006042 Bacteria 1392
27 Ga0075364_10269673 3300006051 Bacteria 1158
28 Ga0075367_10093853 3300006178 Bacteria 1828
29 Ga0075367_10199213 3300006178 Unclassified 1251
30 Ga0075366_10066820 3300006195 Bacteria 2139
31 Ga0075366_10212598 3300006195 Bacteria 1177
32 Ga0075370_10056715 3300006353 Bacteria 2226
33 Ga0075428_100397105 3300006844 Bacteria 1478
34 Ga0075430_100250009 3300006846 Bacteria 1469
35 Ga0111539_10012485 3300009094 Bacteria 10646
36 Ga0111539_10023987 3300009094 Bacteria 7493
37 Ga0111539_10088011 3300009094 Bacteria 3649
38 Ga0111539_10326736 3300009094 Bacteria 1785
39 Ga0114129_10647424 3300009147 Bacteria 1364
40 Ga0105243_10018227 3300009148 Bacteria 5315
41 Ga0105242_10037263 3300009176 Bacteria 3906
42 Ga0105249_10049447 3300009553 Bacteria 3834
43 Ga0157375_11736839 3300013308 Bacteria 739
44 Ga0157380_10014754 3300014326 Bacteria 5721
45 Ga0157380_10114155 3300014326 Bacteria 2276
46 Ga0157380_10142738 3300014326 Bacteria 2059
47 Ga0157380_10253680 3300014326 Bacteria 1594
48 Ga0157380_10810564 3300014326 Bacteria 954
49 Ga0157380_11069875 3300014326 Bacteria 844
50 Ga0207642_10041380 3300025899 Bacteria 2017
51 Ga0207684_10352855 3300025910 Bacteria 1266
52 Ga0207686_10059170 3300025934 Bacteria 2419
53 Ga0207709_10031401 3300025935 Bacteria 3102
54 Ga0207669_10154169 3300025937 Bacteria 1613
55 Ga0207712_10045675 3300025961 Bacteria 3034
56 Ga0207712_10228802 3300025961 Bacteria 1491
57 Ga0207668_10401358 3300025972 Bacteria 1159
58 Ga0207708_10055801 3300026075 Bacteria 3012
59 Ga0207708_10086678 3300026075 Bacteria 2410
60 Ga0207708_10325434 3300026075 Bacteria 1255
61 Ga0207648_10056844 3300026089 Bacteria 3414
62 Ga0207675_100000988 3300026118 Bacteria 28193
63 Ga0207675_100031306 3300026118 Bacteria 4957
64 Ga0207428_10023059 3300027907 Bacteria 5241
65 Ga0207428_10105749 3300027907 Bacteria 2170
66 Ga0268266_10203972 3300028379 Bacteria 1811
67 Ga0268266_10389367 3300028379 Unclassified 1316
68 Ga0268265_10028593 3300028380 Bacteria 3993
69 Ga0307514_10288975 3300031649 Bacteria 930
70 Ga0307405_10209398 3300031731 Bacteria 1422
71 Ga0307413_10047293 3300031824 Unclassified 2564
72 Ga0307413_10114613 3300031824 Bacteria 1812
73 Ga0307413_10356515 3300031824 Bacteria 1131
74 Ga0307410_10006328 3300031852 Bacteria 6381
75 Ga0307410_10016705 3300031852 Bacteria 4387
76 Ga0307410_10471794 3300031852 Bacteria 1028
77 Ga0307410_10605653 3300031852 Unclassified 914
78 Ga0307406_10015238 3300031901 Bacteria 4444
79 Ga0307406_10407117 3300031901 Bacteria 1080
80 Ga0307407_10133010 3300031903 Unclassified 1594
81 Ga0307407_10284894 3300031903 Bacteria 1146
82 Ga0307412_10178443 3300031911 Bacteria 1595
83 Ga0307409_100263121 3300031995 Bacteria 1584
84 Ga0307409_101052734 3300031995 Unclassified 833
85 Ga0307416_100023182 3300032002 Bacteria 4500
86 Ga0307416_100049728 3300032002 Bacteria 3336
87 Ga0307416_100175026 3300032002 Bacteria 2003
88 Ga0307411_10039895 3300032005 Bacteria 2974
89 Ga0307411_10250976 3300032005 Unclassified 1391
90 Ga0307411_10405837 3300032005 Bacteria 1128
91 Ga0307411_10624691 3300032005 Bacteria 929
92 Ga0307415_100040530 3300032126 Bacteria 3086
93 Ga0307415_100090980 3300032126 Bacteria 2209
94 Ga0307415_100229554 3300032126 Unclassified 1494
95 Ga0307415_100266862 3300032126 Unclassified 1400
96 Ga0307415_100409907 3300032126 Bacteria 1160
97 Ga0451787_142860 3300041441 Bacteria 1196
98 Ga0451798_0784129 3300041458 Bacteria 1018
99 Ga0451807_0779118 3300041486 Bacteria 989
100 Ga0451807_2448859 3300041486 Bacteria 2523
101 Ga0451833_1275000 3300041491 Bacteria 1427
102 Ga0451837_0671018 3300041494 Bacteria 3009
103 Ga0451853_0835244 3300041512 Unclassified 754
104 Ga0451853_1417698 3300041512 Bacteria 959
105 Ga0450923_067096 3300042125 Unclassified 791
106 Ga0450894_022099 3300042131 Unclassified 861
107 Ga0450908_017069 3300042184 Bacteria 1291
108 Ga0495638_0267843 3300046460 Bacteria 934
109 Ga0495616_0001887 3300046513 Bacteria 14157
110 Ga0495616_0113605 3300046513 Unclassified 1256
111 Ga0495656_0116346 3300046615 Bacteria 1257
112 Ga0495625_0012635 3300046660 Bacteria 6834
113 Ga0495670_0327643 3300046691 Unclassified 823
114 Ga0495686_0221680 3300047472 Unclassified 1075
115 Ga0501033_0030747 3300049570 Bacteria 4035
116 Ga0501038_0010709 3300049574 Bacteria 8384
117 Ga0501039_0480186 3300049575 Bacteria 976
118 Ga0501040_0000575 3300049576 Bacteria 22343
119 Ga0501041_0000570 3300049577 Bacteria 19194
120 Ga0501042_0218725 3300049578 Bacteria 1374
121 Ga0501042_0434013 3300049578 Bacteria 952
122 Ga0501048_0008556 3300049582 Bacteria 7729
123 Ga0501048_0076152 3300049582 Bacteria 2368
124 Ga0501067_0082633 3300049583 Bacteria 1781
125 Ga0501068_0012359 3300049584 Bacteria 4838
126 Ga0501068_0039525 3300049584 Bacteria 2829
127 Ga0501069_0361385 3300049585 Bacteria 857
128 Ga0501070_0012115 3300049586 Bacteria 7278
129 Ga0501071_0000869 3300049587 Bacteria 16290
130 Ga0501071_0005268 3300049587 Bacteria 8293
131 Ga0501071_0247929 3300049587 Bacteria 1344
132 Ga0501071_0440626 3300049587 Bacteria 997
133 Ga0501071_0467112 3300049587 Bacteria 966
134 Ga0501072_0000489 3300049588 Bacteria 28410
135 Ga0501072_0113286 3300049588 Bacteria 2159
136 Ga0501072_0412218 3300049588 Bacteria 1071
137 Ga0501072_0565066 3300049588 Bacteria 898
138 Ga0501072_0644435 3300049588 Unclassified 834
139 Ga0501073_0000361 3300049589 Bacteria 30621
140 Ga0501074_0000307 3300049590 Bacteria 28295
141 Ga0501074_0033614 3300049590 Bacteria 3717
142 Ga0501075_0000135 3300049591 Bacteria 36541
143 Ga0501075_0069456 3300049591 Bacteria 2662
144 Ga0501076_0001293 3300049592 Bacteria 16692
145 Ga0501076_0007804 3300049592 Bacteria 7799
146 Ga0501076_0131295 3300049592 Bacteria 2031
147 Ga0501076_0527807 3300049592 Bacteria 973
148 Ga0501076_1274579 3300049592 Bacteria 604
149 Ga0501077_0000426 3300049593 Bacteria 25537
150 Ga0501077_0005021 3300049593 Bacteria 8025
151 Ga0501079_0000173 3300049741 Bacteria 36255
152 Ga0501079_0001347 3300049741 Bacteria 17269
153 Ga0501079_1018566 3300049741 Unclassified 652
154 Ga0501080_0001403 3300049742 Bacteria 20193
155 Ga0501081_0000054 3300049743 Bacteria 43448
156 Ga0501081_0386333 3300049743 Bacteria 1035
157 Ga0501081_0408076 3300049743 Bacteria 1006
158 Ga0501083_0051652 3300049744 Bacteria 2764
159 Ga0501035_0043636 3300049822 Bacteria 4040
160 Ga0501045_0024365 3300049824 Bacteria 4344
161 Ga0501045_0078112 3300049824 Bacteria 2440
162 Ga0501045_0438600 3300049824 Bacteria 971
163 nmdc:mga0k408_344762_c1 3300050493 Bacteria 888
164 nmdc:mga0k408_40775_c1 3300050493 Bacteria 2673
165 nmdc:mga0k408_89544_c1 3300050493 Bacteria 1807
166 nmdc:mga06z11_299292_c1 3300050494 Bacteria 956
167 nmdc:mga04h51_107116_c1 3300050495 Bacteria 1026
168 nmdc:mga07m45_325358_c1 3300050496 Bacteria 894
169 nmdc:mga05p37_174026_c1 3300050507 Bacteria 2624
170 nmdc:mga06r32_266345_c1 3300050510 Bacteria 1701
171 nmdc:mga06r32_287492_c1 3300050510 Bacteria 1631
172 nmdc:mga08y16_149765_c1 3300050511 Bacteria 2426
173 nmdc:mga08y16_281835_c1 3300050511 Bacteria 1714
174 nmdc:mga08y16_37866_c1 3300050511 Bacteria 5064
175 nmdc:mga08y16_44441_c1 3300050511 Unclassified 4654
176 nmdc:mga08y16_690638_c1 3300050511 Bacteria 1021
177 Ga0500644_0275626 3300053088 Unclassified 715
178 Ga0500611_053084 3300053727 Bacteria 935
179 Ga0501084_0002207 3300054114 Bacteria 15617
180 Ga0501084_0006473 3300054114 Bacteria 9631
181 Ga0501084_0057424 3300054114 Bacteria 3257
182 Ga0590071_000205 3300059421 Bacteria 17433
183 Ga0590071_035555 3300059421 Bacteria 1193
184 Ga0590075_022079 3300059424 Bacteria 1591
185 Ga0590077_025410 3300059426 Bacteria 1276
186 Ga0501082_0002032 3300060353 Bacteria 17792
187 Ga0530510_0000950 3300061734 Bacteria 19120
188 Ga0501039_0457067
189 Ga0070677_10175329
190 Ga0070668_100077260
191 Ga0070675_100334248
192 Ga0070674_100005041
193 Ga0070674_100433710
194 Ga0070700_100022473
195 Ga0070700_100083251
196 Ga0070700_100297807
197 Ga0070694_100257130
198 Ga0070694_100752412
199 Ga0068867_100286120
200 Ga0070685_10088397
201 Ga0070706_100149039
202 Ga0070698_100126801
203 Ga0070699_100002749
204 Ga0070672_100367960
205 Ga0070695_100277472
206 Ga0070665_100095299
207 Ga0070704_100041609
208 Ga0070704_100373071
209 Ga0068861_100000155
210 Ga0068861_100202673
211 Ga0068862_100680817
212 Ga0081538_10025961
213 Ga0075368_10072620
214 Ga0075364_10269673
215 Ga0075367_10093853
216 Ga0075367_10199213
217 Ga0075366_10066820
218 Ga0075366_10212598
219 Ga0075370_10056715
220 Ga0075428_100397105
221 Ga0075430_100250009
222 Ga0111539_10012485
223 Ga0111539_10023987
224 Ga0111539_10088011
225 Ga0111539_10326736
226 Ga0114129_10647424
227 Ga0105243_10018227
228 Ga0105242_10037263
229 Ga0105249_10049447
230 Ga0157375_11736839
231 Ga0157380_10014754
232 Ga0157380_10114155
233 Ga0157380_10142738
234 Ga0157380_10253680
235 Ga0157380_10810564
236 Ga0157380_11069875
237 Ga0207642_10041380
238 Ga0207684_10352855
239 Ga0207686_10059170
240 Ga0207709_10031401
241 Ga0207669_10154169
242 Ga0207712_10045675
243 Ga0207712_10228802
244 Ga0207668_10401358
245 Ga0207708_10055801
246 Ga0207708_10086678
247 Ga0207708_10325434
248 Ga0207648_10056844
249 Ga0207675_100000988
250 Ga0207675_100031306
251 Ga0207428_10023059
252 Ga0207428_10105749
253 Ga0268266_10203972
254 Ga0268266_10389367
255 Ga0268265_10028593
256 Ga0307514_10288975
257 Ga0307405_10209398
258 Ga0307413_10047293
259 Ga0307413_10114613
260 Ga0307413_10356515
261 Ga0307410_10006328
262 Ga0307410_10016705
263 Ga0307410_10471794
264 Ga0307410_10605653
265 Ga0307406_10015238
266 Ga0307406_10407117
267 Ga0307407_10133010
268 Ga0307407_10284894
269 Ga0307412_10178443
270 Ga0307409_100263121
271 Ga0307409_101052734
272 Ga0307416_100023182
273 Ga0307416_100049728
274 Ga0307416_100175026
275 Ga0307411_10039895
276 Ga0307411_10250976
277 Ga0307411_10405837
278 Ga0307411_10624691
279 Ga0307415_100040530
280 Ga0307415_100090980
281 Ga0307415_100229554
282 Ga0307415_100266862
283 Ga0307415_100409907
284 Ga0451787_142860
285 Ga0451798_0784129
286 Ga0451807_0779118
287 Ga0451807_2448859
288 Ga0451833_1275000
289 Ga0451837_0671018
290 Ga0451853_0835244
291 Ga0451853_1417698
292 Ga0450923_067096
293 Ga0450894_022099
294 Ga0450908_017069
295 Ga0495638_0267843
296 Ga0495616_0001887
297 Ga0495616_0113605
298 Ga0495656_0116346
299 Ga0495625_0012635
300 Ga0495670_0327643
301 Ga0495686_0221680
302 Ga0501033_0030747
303 Ga0501038_0010709
304 Ga0501039_0480186
305 Ga0501040_0000575
306 Ga0501041_0000570
307 Ga0501042_0218725
308 Ga0501042_0434013
309 Ga0501048_0008556
310 Ga0501048_0076152
311 Ga0501067_0082633
312 Ga0501068_0012359
313 Ga0501068_0039525
314 Ga0501069_0361385
315 Ga0501070_0012115
316 Ga0501071_0000869
317 Ga0501071_0005268
318 Ga0501071_0247929
319 Ga0501071_0440626
320 Ga0501071_0467112
321 Ga0501072_0000489
322 Ga0501072_0113286
323 Ga0501072_0412218
324 Ga0501072_0565066
325 Ga0501072_0644435
326 Ga0501073_0000361
327 Ga0501074_0000307
328 Ga0501074_0033614
329 Ga0501075_0000135
330 Ga0501075_0069456
331 Ga0501076_0001293
332 Ga0501076_0007804
333 Ga0501076_0131295
334 Ga0501076_0527807
335 Ga0501076_1274579
336 Ga0501077_0000426
337 Ga0501077_0005021
338 Ga0501079_0000173
339 Ga0501079_0001347
340 Ga0501079_1018566
341 Ga0501080_0001403
342 Ga0501081_0000054
343 Ga0501081_0386333
344 Ga0501081_0408076
345 Ga0501083_0051652
346 Ga0501035_0043636
347 Ga0501045_0024365
348 Ga0501045_0078112
349 Ga0501045_0438600
350 nmdc:mga0k408_344762_c1
351 nmdc:mga0k408_40775_c1
352 nmdc:mga0k408_89544_c1
353 nmdc:mga06z11_299292_c1
354 nmdc:mga04h51_107116_c1
355 nmdc:mga07m45_325358_c1
356 nmdc:mga05p37_174026_c1
357 nmdc:mga06r32_266345_c1
358 nmdc:mga06r32_287492_c1
359 nmdc:mga08y16_149765_c1
360 nmdc:mga08y16_281835_c1
361 nmdc:mga08y16_37866_c1
362 nmdc:mga08y16_44441_c1
363 nmdc:mga08y16_690638_c1
364 Ga0500644_0275626
365 Ga0500611_053084
366 Ga0501084_0002207
367 Ga0501084_0006473
368 Ga0501084_0057424
369 Ga0590071_000205
370 Ga0590071_035555
371 Ga0590075_022079
372 Ga0590077_025410
373 Ga0501082_0002032
374 Ga0530510_0000950

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ui9-assembly1.cif.gz_a core mediator-picearly (copy a) 0.4219 42 122
8gym-assembly1.cif.gz_s8 cryo-em structure of tetrahymena thermophila respiratory mega-complex mc iv2+(i+iii2+ii)2 0.386 104 121
8ceo-assembly1.cif.gz_p yeast rna polymerase ii transcription pre-initiation complex with core mediator and the +1 nucleosome 0.3841 43 127
7ka0-assembly1.cif.gz_A crystal structure of the complex of m. tuberculosis phers with cognate precursor trna and phenylalanine 0.3491 92 161
4dyp-assembly2.cif.gz_B crystal structure of wsn/a influenza nucleoprotein with bms-831780 ligand bound 0.3269 38 90
ID Description Score Start End Superfamily
af_D3ZFG3_142_256_2.40.10.10 Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases 0.4302 83 121 2.40.10.10
af_Q1JPX3_176_497_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.3999 93 164 3.30.930.10
af_Q9M8J3_204_280_3.30.200.20 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1;Phosphorylase Kinase; domain 1 0.3993 57 116 3.30.200.20
af_Q24151_1_602_2.60.40.630 Mainly Beta;Sandwich;Immunoglobulin-like;STAT transcription factor, DNA-binding domain 0.3626 1 64 2.60.40.630
af_A0A1D6GEP2_103_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.3507 8 65 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V9PMC7-F1-model_v4 Uncharacterized protein 0.9896 41 188
AF-A0A2V7X1K9-F1-model_v4 Uncharacterized protein 0.9698 45 189
AF-A0A529TWL0-F1-model_v4 Uncharacterized protein 0.9688 82 188
AF-A0A4Q3YXG3-F1-model_v4 Uncharacterized protein 0.9648 44 184
AF-A0A4Q3DR31-F1-model_v4 Uncharacterized protein 0.9631 43 184

Map