F288300

General Info

Members Datasets Scaffolds Average Seq Length
187 158 374 681

Family's Representative Sequence

Representative Sequence 3300048922|Ga0496119_0004479|Ga0496119_0004479_5746_7938
Length 730
Sequence LIIFVLLIFKLKQKCYSLHKQRITTVIKPFKTKTKLGGLFPMVQSLWISSQASEQKSTLEQLVYRSNLIGTDRSVCNWGGGNTSAKTMIQDFRGREVEVMYVKGSGSDLATMKAHNFTGLRMEDIRPLFEREDMSDEDMVAYLANCMIDAKHPRASIETLLHAFLPFRHVDHTHPDAIISLCCAHNGKEIAKEIFGDRFVWVPYIRPGFKLSKMIAQGVLDHPQAELVLMEKHGLVTWGETSEAAYAKTIEIIQEAESYIKARQEEKQAFGGTKYKALTYKERRSIASQVMPSVRGAVSDEKKMILTFDDAEDVLEFVNGRDSAALSQVGAACPDHLVHTKMKPLYVDWTPDVEDVEGLKVKLAEGIAAYKEQYQAYFERNRHEGDVMFEAAPRVILIPGIGMINTGKSWSNAQVSGALYHRAIAVMRGATALGEFVSLSENESYNVEYWPLELYKLSLAPAEAEFSRKIAFITGGAGGIGSATARRLVDEGAHVVLADLNLEGAQKVATEINSSYGENRAIAVKMDVTQEEQIQAAYAETALTYGGVDTIVNNAGLATSSPFDETSLKEWNLNVNVLGTGYFLVAREAFKLMKEQTLGGNMVFVGSKNSVYAGKNVTAYSSVKALEAHLARCIAAEGGEYGIRVNTILPDAILQGSAIWNSNWRNERAAAYGIEPDQLEEHYRKRTTLLVNIYPQDIAEGIAFFASSKAEKTTGCMLTIDGGVPAAFTR

Samples

Sample ID Description Type Environment
1 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
2 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
17 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
18 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
19 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
20 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
21 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
22 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
23 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
24 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
25 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
26 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
29 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
40 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
41 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
42 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
43 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
44 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
45 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
46 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
47 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
48 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
49 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
50 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
51 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
52 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
53 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
54 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
55 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
56 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
57 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
58 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
59 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
60 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
61 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
62 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
63 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
64 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
65 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
66 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
67 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
68 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
69 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
70 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
71 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
72 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
73 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
80 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
81 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
82 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
85 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
86 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
87 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
88 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
89 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
90 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
91 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
92 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
93 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
94 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
95 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
96 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
97 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
98 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
99 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
100 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
101 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
102 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
103 2818991441 Niallia circulans 3243 Isolate Rhizosphere
104 2818991459 Paenibacillus sp. 597 Isolate Unclassified
105 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
106 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
107 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
108 2857472729 Cohnella sp. R-74144 Isolate Unclassified
109 2857581216 Bacillus sp. R-71922 Isolate Unclassified
110 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
111 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
112 2860837431 Bacillus sp. WR11 Isolate Unclassified
113 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
114 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
115 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
116 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
117 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
118 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
119 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
120 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
121 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
122 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
123 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
124 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
125 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
126 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
127 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
128 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
129 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
130 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
131 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
132 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
133 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
134 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
135 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
136 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
137 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
138 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
139 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
140 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
141 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
142 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
143 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
144 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
145 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
146 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
147 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
148 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
149 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
150 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
151 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
152 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
153 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
154 8022653035 Bacillus sp. Rc4 Isolate Unclassified
155 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
156 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
157 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
158 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 61.5
Metatranscriptomes 0.53
Isolates 37.97

Biome Distribution

Category Percentage (%)
Aerial Root 1.07
Bulb 0
Endosphere 3.74
Nodule 0.53
Rhizoplane 1.6
Rhizosphere 67.38
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496119_0004479 3300048922 Bacteria 13892
2 Ga0055538_1000346 3300003751 Bacteria 20536
3 Ga0070683_100028164 3300005329 Bacteria 5075
4 Ga0070660_100001900 3300005339 Bacteria 14394
5 Ga0070714_100016800 3300005435 Bacteria 5918
6 Ga0070713_100120832 3300005436 Bacteria 2297
7 Ga0070708_100001816 3300005445 Bacteria 16395
8 Ga0070706_100007342 3300005467 Bacteria 10338
9 Ga0070706_100008011 3300005467 Bacteria 9856
10 Ga0070706_100008870 3300005467 Bacteria 9370
11 Ga0070706_100013239 3300005467 Bacteria 7630
12 Ga0070707_100025930 3300005468 Bacteria 5563
13 Ga0070699_100008433 3300005518 Bacteria 8928
14 Ga0070679_100049595 3300005530 Bacteria 4181
15 Ga0070697_100045938 3300005536 Bacteria 3539
16 Ga0068857_100012891 3300005577 Bacteria 7284
17 Ga0081539_10003478 3300005985 Bacteria 19239
18 Ga0070717_10001454 3300006028 Bacteria 16343
19 Ga0070717_10004297 3300006028 Bacteria 10271
20 Ga0070717_10035146 3300006028 Bacteria 4054
21 Ga0075431_100013524 3300006847 Bacteria 8246
22 Ga0075436_100000031 3300006914 Bacteria 89989
23 Ga0105245_10060603 3300009098 Bacteria 3408
24 Ga0105237_10000290 3300009545 Bacteria 69421
25 Ga0105237_10024496 3300009545 Bacteria 6174
26 Ga0105238_10007602 3300009551 Bacteria 10860
27 Ga0105239_10125896 3300010375 Bacteria 2847
28 Ga0157371_10002771 3300013102 Bacteria 16461
29 Ga0157376_10067086 3300014969 Bacteria 3034
30 Ga0213876_10016304 3300021384 Bacteria 3927
31 Ga0209784_100228 3300025224 Bacteria 37610
32 Ga0209566_100183 3300025225 Bacteria 66605
33 Ga0209566_100284 3300025225 Bacteria 46586
34 Ga0209147_100142 3300025229 Bacteria 113692
35 Ga0209437_101625 3300025233 Bacteria 5137
36 Ga0207688_10012347 3300025901 Bacteria 4648
37 Ga0207684_10004872 3300025910 Bacteria 12550
38 Ga0207684_10007505 3300025910 Bacteria 9814
39 Ga0207671_10000309 3300025914 Bacteria 72075
40 Ga0207657_10016157 3300025919 Bacteria 7206
41 Ga0207657_10028828 3300025919 Bacteria 5058
42 Ga0207646_10023779 3300025922 Bacteria 5623
43 Ga0207664_10024488 3300025929 Bacteria 4536
44 Ga0207670_10047461 3300025936 Bacteria 2860
45 Ga0207674_10019769 3300026116 Bacteria 7287
46 Ga0207674_10062756 3300026116 Bacteria 3752
47 Ga0207675_100057180 3300026118 Bacteria 3639
48 Ga0207675_100064216 3300026118 Bacteria 3431
49 Ga0207675_100109371 3300026118 Bacteria 2608
50 Ga0207698_10084963 3300026142 Bacteria 2568
51 Ga0307515_10000008 3300028794 Bacteria 663660
52 Ga0307409_100013411 3300031995 Bacteria 5274
53 Ga0307409_100099384 3300031995 Bacteria 2409
54 Ga0307416_100057673 3300032002 Bacteria 3143
55 Ga0373927_0000030 3300035695 Bacteria 107610
56 Ga0373927_0007507 3300035695 Bacteria 7374
57 Ga0373925_0000212 3300037068 Bacteria 63430
58 Ga0395899_0020558 3300037312 Bacteria 5003
59 Ga0395900_0001893 3300037418 Bacteria 23798
60 Ga0395900_0013493 3300037418 Bacteria 8349
61 Ga0395898_0003208 3300037466 Bacteria 18407
62 Ga0395898_0023215 3300037466 Bacteria 6269
63 Ga0395905_0000394 3300037471 Bacteria 61895
64 Ga0436364_1226561 3300037853 Bacteria 4831
65 Ga0436364_1448617 3300037853 Bacteria 10008
66 Ga0436365_1014892 3300039437 Bacteria 43093
67 Ga0436365_1283664 3300039437 Bacteria 12400
68 Ga0436365_1318751 3300039437 Bacteria 3229
69 Ga0436365_1629442 3300039437 Bacteria 7162
70 Ga0436365_1840370 3300039437 Bacteria 32113
71 Ga0439436_0001920 3300041404 Bacteria 6156
72 Ga0439439_0000806 3300041406 Bacteria 5697
73 Ga0439433_0001000 3300041999 Bacteria 5705
74 Ga0439449_0000102 3300042007 Bacteria 27549
75 Ga0439462_0000100 3300042015 Bacteria 13518
76 Ga0466969_0001103 3300044656 Bacteria 14570
77 Ga0466969_0008177 3300044656 Bacteria 5552
78 Ga0466969_0013638 3300044656 Bacteria 4278
79 Ga0466964_0000718 3300044706 Bacteria 10711
80 Ga0466964_0032390 3300044706 Bacteria 2077
81 Ga0466968_0001294 3300044735 Bacteria 8930
82 Ga0466970_0000646 3300044765 Bacteria 17159
83 Ga0495662_0000397 3300046476 Bacteria 19466
84 Ga0495635_0042077 3300046663 Bacteria 3156
85 Ga0495613_0080461 3300046689 Bacteria 2368
86 Ga0496109_0026605 3300048912 Bacteria 5160
87 Ga0496112_0127550 3300048915 Bacteria 2515
88 Ga0496115_0000951 3300048918 Bacteria 21031
89 Ga0496116_0029373 3300048919 Bacteria 3964
90 Ga0496117_0011744 3300048920 Bacteria 7808
91 Ga0496120_0003398 3300048923 Bacteria 14558
92 Ga0496122_0012785 3300048925 Bacteria 8306
93 Ga0496122_0028171 3300048925 Bacteria 4778
94 Ga0496122_0038146 3300048925 Bacteria 3855
95 Ga0496123_0008188 3300048926 Bacteria 9641
96 Ga0496125_0000260 3300048928 Bacteria 108939
97 Ga0496125_0045629 3300048928 Bacteria 3685
98 Ga0496126_0004617 3300048929 Bacteria 16330
99 Ga0501316_001036 3300049532 Bacteria 2228
100 Ga0501031_0015890 3300049568 Bacteria 4888
101 Ga0501037_0003001 3300049573 Bacteria 12258
102 Ga0501038_0084248 3300049574 Bacteria 2675
103 Ga0501040_0032173 3300049576 Bacteria 3549
104 Ga0501042_0007625 3300049578 Bacteria 7101
105 Ga0501047_0005275 3300049581 Bacteria 12144
106 Ga0501072_0028421 3300049588 Bacteria 4366
107 Ga0501075_0013970 3300049591 Bacteria 5746
108 Ga0501076_0012383 3300049592 Bacteria 6375
109 Ga0501081_0028875 3300049743 Bacteria 3746
110 Ga0501081_0071645 3300049743 Bacteria 2416
111 Ga0501044_0022419 3300049823 Bacteria 6729
112 Ga0501045_0004504 3300049824 Bacteria 9623
113 nmdc:mga06r32_49778_c1 3300050510 Bacteria 4008
114 nmdc:mga08x19_47_c1 3300050514 Bacteria 141509
115 Ga0500637_0065954 3300053178 Bacteria 2078
116 Ga0501084_0027425 3300054114 Bacteria 4759
117 2512735241 2512564039 Bacteria 8739048
118 2540608027 2540341094 Bacteria 4061186
119 2563926549 2563366752 Bacteria 4961801
120 2587739192 2585428059 Bacteria 8696589
121 2595315774 2593339198 Bacteria 7267884
122 2643736393 2643221543 Bacteria 6628015
123 2644427995 2643221676 Bacteria 8119172
124 2723603786 2721755693 Bacteria 6126117
125 2730139779 2728369359 Bacteria 5621728
126 2753807897 2751185905 Bacteria 6142767
127 2793182760 2791355222 Bacteria 5898266
128 2802435708 2802428803 Bacteria 5806948
129 2809053156 2808606399 Bacteria 4021018
130 2817481678 2816332295 Bacteria 4352468
131 2819570874 2818991441 Bacteria 5062707
132 2819671978 2818991459 Bacteria 8736032
133 2821113222 2821111986 Bacteria 6894338
134 2857456193 2857453340 Bacteria 8090534
135 2857467610 2857465823 Bacteria 6772595
136 2857475744 2857472729 Bacteria 6568124
137 2857582054 2857581216 Bacteria 5522813
138 2857594876 2857591370 Bacteria 6569758
139 2857604946 2857604169 Bacteria 5111450
140 2860840815 2860837431 Bacteria 4202080
141 2864738997 2864733723 Bacteria 6770668
142 2885529742 2885526491 Bacteria 7164189
143 2888583308 2888578766 Bacteria 6743310
144 2889045274 2889042446 Bacteria 7618936
145 2889054492 2889049205 Bacteria 7524325
146 2889279721 2889276214 Bacteria 5979355
147 2898908423 2898907183 Bacteria 4067722
148 2904116224 2904113452 Bacteria 7796941
149 2904165018 2904162308 Bacteria 7086713
150 2904492148 2904490793 Bacteria 7046938
151 2904601264 2904595352 Bacteria 6124848
152 2904758876 2904755435 Bacteria 7986759
153 2907203924 2907202186 Bacteria 6632024
154 2919161377 2919160200 Bacteria 6929020
155 2919426092 2919425241 Bacteria 8055701
156 2925330056 2925326138 Bacteria 9652120
157 2929207803 2929206907 Bacteria 5918291
158 2931388707 2931384279 Bacteria 7299545
159 2939682803 2939679117 Bacteria 6921672
160 2945992716 2945991243 Bacteria 7008369
161 2946055468 2946053406 Bacteria 6978655
162 2956899901 2956897341 Bacteria 5447711
163 2962294042 2962290636 Bacteria 4072939
164 2969140022 2969136845 Bacteria 3923176
165 2969769216 2969765954 Bacteria 4216713
166 2969771531 2969770375 Bacteria 4271280
167 2971411849 2971410472 Bacteria 8311090
168 2980189115 2980182181 Bacteria 9454109
169 2980495810 2980492589 Bacteria 4072961
170 2984529153 2984527788 Bacteria 5288478
171 2984535260 2984532647 Bacteria 5288506
172 2996708750 2996706504 Bacteria 5757485
173 3001267893 3001267043 Bacteria 4823521
174 3001273409 3001272096 Bacteria 4729684
175 3006862108 3006858327 Bacteria 4317835
176 3006882534 3006879489 Bacteria 4064221
177 3006970869 3006969106 Bacteria 4739423
178 3006985066 3006984091 Bacteria 4207523
179 3006987293 3006984091 Bacteria 4207523
180 3006989420 3006988479 Bacteria 4767936
181 648170077 648028048 Bacteria 5394884
182 8002319959 8002317523 Bacteria 8051857
183 8022656216 8022653035 Bacteria 4035078
184 8046998026 8046991243 Bacteria 8497463
185 8054802487 8054795415 Bacteria 9785225
186 8056538043 8056533031 Bacteria 8964429
187 8057477771 8057473075 Bacteria 5892720
188 Ga0496119_0004479
189 Ga0055538_1000346
190 Ga0070683_100028164
191 Ga0070660_100001900
192 Ga0070714_100016800
193 Ga0070713_100120832
194 Ga0070708_100001816
195 Ga0070706_100007342
196 Ga0070706_100008011
197 Ga0070706_100008870
198 Ga0070706_100013239
199 Ga0070707_100025930
200 Ga0070699_100008433
201 Ga0070679_100049595
202 Ga0070697_100045938
203 Ga0068857_100012891
204 Ga0081539_10003478
205 Ga0070717_10001454
206 Ga0070717_10004297
207 Ga0070717_10035146
208 Ga0075431_100013524
209 Ga0075436_100000031
210 Ga0105245_10060603
211 Ga0105237_10000290
212 Ga0105237_10024496
213 Ga0105238_10007602
214 Ga0105239_10125896
215 Ga0157371_10002771
216 Ga0157376_10067086
217 Ga0213876_10016304
218 Ga0209784_100228
219 Ga0209566_100183
220 Ga0209566_100284
221 Ga0209147_100142
222 Ga0209437_101625
223 Ga0207688_10012347
224 Ga0207684_10004872
225 Ga0207684_10007505
226 Ga0207671_10000309
227 Ga0207657_10016157
228 Ga0207657_10028828
229 Ga0207646_10023779
230 Ga0207664_10024488
231 Ga0207670_10047461
232 Ga0207674_10019769
233 Ga0207674_10062756
234 Ga0207675_100057180
235 Ga0207675_100064216
236 Ga0207675_100109371
237 Ga0207698_10084963
238 Ga0307515_10000008
239 Ga0307409_100013411
240 Ga0307409_100099384
241 Ga0307416_100057673
242 Ga0373927_0000030
243 Ga0373927_0007507
244 Ga0373925_0000212
245 Ga0395899_0020558
246 Ga0395900_0001893
247 Ga0395900_0013493
248 Ga0395898_0003208
249 Ga0395898_0023215
250 Ga0395905_0000394
251 Ga0436364_1226561
252 Ga0436364_1448617
253 Ga0436365_1014892
254 Ga0436365_1283664
255 Ga0436365_1318751
256 Ga0436365_1629442
257 Ga0436365_1840370
258 Ga0439436_0001920
259 Ga0439439_0000806
260 Ga0439433_0001000
261 Ga0439449_0000102
262 Ga0439462_0000100
263 Ga0466969_0001103
264 Ga0466969_0008177
265 Ga0466969_0013638
266 Ga0466964_0000718
267 Ga0466964_0032390
268 Ga0466968_0001294
269 Ga0466970_0000646
270 Ga0495662_0000397
271 Ga0495635_0042077
272 Ga0495613_0080461
273 Ga0496109_0026605
274 Ga0496112_0127550
275 Ga0496115_0000951
276 Ga0496116_0029373
277 Ga0496117_0011744
278 Ga0496120_0003398
279 Ga0496122_0012785
280 Ga0496122_0028171
281 Ga0496122_0038146
282 Ga0496123_0008188
283 Ga0496125_0000260
284 Ga0496125_0045629
285 Ga0496126_0004617
286 Ga0501316_001036
287 Ga0501031_0015890
288 Ga0501037_0003001
289 Ga0501038_0084248
290 Ga0501040_0032173
291 Ga0501042_0007625
292 Ga0501047_0005275
293 Ga0501072_0028421
294 Ga0501075_0013970
295 Ga0501076_0012383
296 Ga0501081_0028875
297 Ga0501081_0071645
298 Ga0501044_0022419
299 Ga0501045_0004504
300 nmdc:mga06r32_49778_c1
301 nmdc:mga08x19_47_c1
302 Ga0500637_0065954
303 Ga0501084_0027425
304 2512735241
305 2540608027
306 2563926549
307 2587739192
308 2595315774
309 2643736393
310 2644427995
311 2723603786
312 2730139779
313 2753807897
314 2793182760
315 2802435708
316 2809053156
317 2817481678
318 2819570874
319 2819671978
320 2821113222
321 2857456193
322 2857467610
323 2857475744
324 2857582054
325 2857594876
326 2857604946
327 2860840815
328 2864738997
329 2885529742
330 2888583308
331 2889045274
332 2889054492
333 2889279721
334 2898908423
335 2904116224
336 2904165018
337 2904492148
338 2904601264
339 2904758876
340 2907203924
341 2919161377
342 2919426092
343 2925330056
344 2929207803
345 2931388707
346 2939682803
347 2945992716
348 2946055468
349 2956899901
350 2962294042
351 2969140022
352 2969769216
353 2969771531
354 2971411849
355 2980189115
356 2980495810
357 2984529153
358 2984535260
359 2996708750
360 3001267893
361 3001273409
362 3006862108
363 3006882534
364 3006970869
365 3006985066
366 3006987293
367 3006989420
368 648170077
369 8002319959
370 8022656216
371 8046998026
372 8054802487
373 8056538043
374 8057477771

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

469

667

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

475

725

0.9

PF00596

Aldolase_II

Class II Aldolase and Adducin N-terminal domain

60

260

0.8

PF08659

KR

KR domain

470

640

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6pej-assembly1.cif.gz_B structure of sorbitol dehydrogenase from sinorhizobium meliloti 1021 bound to sorbitol 0.9645 427 681
4nbv-assembly1.cif.gz_A crystal structure of fabg from cupriavidus taiwanensis 0.9642 427 682
7e6o-assembly1.cif.gz_D crystal structure of polyol dehydrogenase from paracoccus denitrificans 0.9633 427 681
5o3z-assembly1.cif.gz_D crystal structure of sorbitol-6-phosphate 2-dehydrogenase srld from erwinia amylovora 0.9619 427 681
6ixm-assembly1.cif.gz_B crystal structure of the ketone reductase chkred20 from the genome of chryseobacterium sp. ca49 complexed with nad 0.9607 427 684
ID Description Score Start End Superfamily
4ni5A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9671 423 684 3.40.50.720
af_P05707_2_258_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9621 427 681 3.40.50.720
6ixmB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9607 427 684 3.40.50.720
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9555 511 611 3.40.50.720
4e6pC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9548 427 681 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A5C7XHG4-F1-model_v4 SDR family oxidoreductase 0.9663 427 611 GO:0016491
AF-A0A2J1DVF9-F1-model_v4 Short-chain dehydrogenase 0.9655 427 582 GO:0006633
GO:0016616
GO:0048038
AF-A0A2N3E5P0-F1-model_v4 Short-chain dehydrogenase 0.9631 427 601 GO:0016491
AF-A0A7C2NC93-F1-model_v4 SDR family oxidoreductase 0.9623 2 688 GO:0016491
AF-A0A532EB68-F1-model_v4 SDR family oxidoreductase 0.9582 427 616 GO:0016491

Map