F287851

General Info

Members Datasets Scaffolds Average Seq Length
187 127 374 791

Family's Representative Sequence

Representative Sequence 3300028563|Ga0265319_1001333|Ga0265319_10013336
Length 835
Sequence MSAQSLLSKRVSLDRERISALAIMKKSIEKVVILGAGTMGARIAAHVANAGVWCALLDIVPSAPNADEQKRGLTVESPEVRNRIVRAGLAAAARSKPAAFFTRGLENRVVTGNFDDNLKLYAEADWIIEVVAENLEIKRALLTRVAQVRKPGTIVTTNTSGLPVHSIAEGMPEEWQQQWAGTHFFNPPRYLKLVEIIPGTATSPEVIAALTEFCDRKLGKGVVIAKDTPNFIANRIGTYTMLSAIRLMGELGMTFEEVDACTGPALGWPKSATFRLADIVGIDVLQHVIRNIYDNIPNDESRELYRVPPIIEELALRKWVGDKTGSGFYKRVKKSGGESEILTLDPAKMEYRPRLRARFASVDAGKAIENTRDRLRMLVGPALEGKDSDKAQKFLWGLISEMCLYAARRVPEISDSLVDVDRAMRWGFGWEMGPFETWDAIGVEPMARQFEKEGKALPPVVTSLLASGKKSFYETGQGATSYFDIGGKEFKSVPQSEGIVILKSLKDRSKEIEKNSGASLIDLGDGVVCCEFHAKMNAIGGDLIAMINKGLGRLRTDFDAMVIANQALNFSAGANLMLILMTAQEQEWDDLHLMVRQFQNVTLGIKHASKPVVVAPQGLALGGGCEIALHGTRIHAAAETYMGLVETGVGLIPGGGGTKEMMIRANERAEGEENLDLFHALKPVFENIAMAKVSTSGEEARELGYLRRADLVAMNLDRLVADAKQTALGLVRSEWRQTAPAPTEPSIRVLGEEFSAAAKLAVHMMLRGEYISEYDALVARKLGHVLAGGALTSAQLVSEQYVLDLEREAFVSLCGERKTQERIAHTLKTGKPLRN

Samples

Sample ID Description Type Environment
1 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
2 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
3 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
34 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
57 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
58 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
59 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
65 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
66 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
67 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
68 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
69 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
70 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
71 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
72 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
73 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
74 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
75 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
78 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
79 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
80 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
81 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
82 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
83 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
84 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
89 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
90 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
91 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
92 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
93 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
94 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
97 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
98 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
99 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
100 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
101 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
102 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
103 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
104 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
105 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
106 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
113 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
114 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
120 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
123 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
124 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
125 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
126 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
127 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.93
Metatranscriptomes 0
Isolates 1.07

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.53
Rhizosphere 97.33
Stem 0
Stem Tuber 0
Unclassified 5.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265319_1001333 3300028563 Bacteria 14895
2 Ga0070675_100026041 3300005354 Bacteria 4691
3 Ga0070703_10000062 3300005406 Bacteria 54112
4 Ga0070709_10000038 3300005434 Bacteria 108855
5 Ga0070709_10009644 3300005434 Bacteria 5332
6 Ga0070709_10016519 3300005434 Unclassified 4217
7 Ga0070711_100000068 3300005439 Bacteria 59815
8 Ga0070705_100003687 3300005440 Bacteria 7497
9 Ga0070708_100012259 3300005445 Bacteria 6989
10 Ga0068867_100025412 3300005459 Bacteria 4249
11 Ga0070706_100000959 3300005467 Bacteria 31429
12 Ga0070707_100000103 3300005468 Bacteria 78150
13 Ga0070698_100045657 3300005471 Bacteria 4483
14 Ga0070699_100000011 3300005518 Bacteria 267738
15 Ga0070697_100011595 3300005536 Bacteria 6888
16 Ga0070697_100026516 3300005536 Bacteria 4630
17 Ga0070697_100045995 3300005536 Bacteria 3538
18 Ga0070696_100000373 3300005546 Bacteria 27295
19 Ga0070696_100014591 3300005546 Bacteria 5274
20 Ga0070665_100001404 3300005548 Bacteria 28325
21 Ga0068855_100002520 3300005563 Bacteria 22564
22 Ga0068857_100041597 3300005577 Bacteria 4075
23 Ga0068856_100040609 3300005614 Bacteria 4571
24 Ga0068863_100069282 3300005841 Bacteria 3336
25 Ga0068858_100114261 3300005842 Bacteria 2522
26 Ga0068860_100002166 3300005843 Bacteria 20690
27 Ga0068862_100047456 3300005844 Bacteria 3665
28 Ga0070716_100033433 3300006173 Bacteria 2812
29 Ga0070712_100022181 3300006175 Bacteria 4179
30 Ga0075428_100001110 3300006844 Bacteria 28651
31 Ga0075430_100023328 3300006846 Bacteria 5265
32 Ga0075430_100062378 3300006846 Bacteria 3131
33 Ga0075434_100013164 3300006871 Bacteria 7859
34 Ga0075436_100000390 3300006914 Bacteria 28151
35 Ga0075436_100006648 3300006914 Bacteria 7920
36 Ga0099794_10002927 3300007265 Bacteria 6428
37 Ga0105240_10001491 3300009093 Bacteria 39868
38 Ga0111539_10037755 3300009094 Bacteria 5831
39 Ga0111539_10118230 3300009094 Unclassified 3107
40 Ga0114129_10001634 3300009147 Bacteria 30446
41 Ga0114129_10045303 3300009147 Bacteria 6184
42 Ga0105248_10008622 3300009177 Bacteria 11198
43 Ga0105248_10017599 3300009177 Bacteria 7882
44 Ga0105237_10002953 3300009545 Bacteria 20583
45 Ga0157378_10000036 3300013297 Bacteria 117422
46 Ga0163163_10000054 3300014325 Bacteria 126041
47 Ga0207653_10000131 3300025885 Bacteria 53307
48 Ga0207699_10000001 3300025906 Bacteria 695560
49 Ga0207699_10007422 3300025906 Bacteria 5364
50 Ga0207684_10000619 3300025910 Bacteria 42259
51 Ga0207695_10014217 3300025913 Bacteria 9441
52 Ga0207663_10000017 3300025916 Bacteria 145654
53 Ga0207646_10000005 3300025922 Bacteria 523896
54 Ga0207646_10023089 3300025922 Bacteria 5717
55 Ga0207700_10039459 3300025928 Bacteria 3438
56 Ga0207665_10000182 3300025939 Bacteria 42287
57 Ga0207665_10009082 3300025939 Bacteria 6527
58 Ga0207665_10018471 3300025939 Bacteria 4581
59 Ga0207711_10010114 3300025941 Bacteria 7837
60 Ga0207661_10030683 3300025944 Bacteria 4144
61 Ga0207667_10000730 3300025949 Bacteria 42679
62 Ga0207641_10077124 3300026088 Bacteria 2883
63 Ga0207641_10099863 3300026088 Bacteria 2555
64 Ga0207648_10009810 3300026089 Bacteria 9146
65 Ga0207674_10002051 3300026116 Bacteria 25565
66 Ga0207683_10059434 3300026121 Bacteria 3358
67 Ga0209588_1000215 3300027671 Bacteria 15584
68 Ga0268266_10000072 3300028379 Bacteria 232245
69 Ga0268265_10034640 3300028380 Bacteria 3682
70 Ga0268264_10008241 3300028381 Bacteria 8653
71 Ga0265318_10000111 3300028577 Bacteria 75372
72 Ga0265330_10015514 3300031235 Bacteria 3523
73 Ga0265332_10003837 3300031238 Bacteria 7178
74 Ga0265320_10000087 3300031240 Bacteria 77435
75 Ga0265325_10001928 3300031241 Bacteria 14315
76 Ga0265325_10020292 3300031241 Bacteria 3664
77 Ga0265325_10021623 3300031241 Bacteria 3531
78 Ga0265329_10000613 3300031242 Bacteria 18339
79 Ga0265340_10010986 3300031247 Bacteria 4828
80 Ga0265339_10003850 3300031249 Bacteria 10415
81 Ga0265331_10000169 3300031250 Bacteria 80399
82 Ga0265316_10004504 3300031344 Bacteria 13846
83 Ga0265316_10026237 3300031344 Bacteria 4851
84 Ga0265313_10002418 3300031595 Bacteria 16143
85 Ga0307508_10001571 3300031616 Bacteria 25486
86 Ga0265342_10001590 3300031712 Bacteria 20964
87 Ga0316578_10009085 3300031728 Bacteria 5094
88 Ga0316578_10009488 3300031728 Bacteria 5009
89 Ga0307516_10018321 3300031730 Bacteria 7278
90 Ga0316577_10009508 3300031733 Bacteria 5232
91 Ga0316583_10001613 3300032133 Bacteria 7621
92 Ga0373926_0007810 3300035083 Unclassified 3564
93 Ga0373934_0002350 3300035086 Bacteria 6962
94 Ga0373953_0004259 3300035117 Bacteria 4546
95 Ga0373954_0000138 3300035118 Bacteria 25392
96 Ga0373957_0002655 3300035120 Bacteria 5135
97 Ga0373955_0001481 3300035172 Bacteria 9980
98 Ga0316574_0028367 3300035398 Bacteria 3376
99 Ga0373933_0000058 3300035724 Bacteria 66002
100 Ga0373933_0000853 3300035724 Bacteria 18662
101 Ga0373947_0002993 3300035725 Bacteria 10077
102 Ga0373947_0010616 3300035725 Bacteria 5284
103 Ga0373937_0000008 3300036401 Bacteria 170075
104 Ga0373937_0006375 3300036401 Bacteria 10178
105 Ga0373937_0055881 3300036401 Bacteria 3624
106 Ga0316582_0001991 3300036647 Bacteria 9366
107 Ga0373925_0000165 3300037068 Bacteria 71445
108 Ga0453684_0034553 3300044712 Bacteria 7013
109 Ga0453684_0047025 3300044712 Bacteria 5728
110 Ga0451576_0007966 3300045051 Bacteria 12534
111 Ga0495629_0059679 3300046459 Bacteria 2666
112 Ga0495651_0000623 3300046462 Bacteria 27451
113 Ga0495651_0000624 3300046462 Bacteria 27410
114 Ga0495651_0004701 3300046462 Bacteria 10450
115 Ga0495651_0005667 3300046462 Bacteria 9518
116 Ga0495580_0026454 3300046472 Bacteria 4230
117 Ga0495582_0009992 3300046473 Bacteria 5223
118 Ga0495639_0010963 3300046475 Bacteria 3903
119 Ga0495664_0004292 3300046477 Bacteria 7783
120 Ga0495608_0024842 3300046511 Bacteria 4094
121 Ga0495608_0056463 3300046511 Bacteria 2593
122 Ga0495628_0000100 3300046516 Bacteria 68834
123 Ga0495628_0026886 3300046516 Bacteria 4684
124 Ga0495628_0028103 3300046516 Unclassified 4573
125 Ga0495628_0066385 3300046516 Bacteria 2821
126 Ga0495630_0002788 3300046517 Bacteria 12127
127 Ga0495630_0010472 3300046517 Bacteria 6698
128 Ga0495630_0038866 3300046517 Unclassified 3559
129 Ga0495666_0009545 3300046526 Bacteria 4849
130 Ga0495652_0000918 3300046529 Bacteria 33886
131 Ga0495652_0026651 3300046529 Bacteria 5104
132 Ga0495652_0027670 3300046529 Unclassified 4994
133 Ga0495587_0003093 3300046536 Bacteria 11116
134 Ga0495587_0003521 3300046536 Bacteria 10426
135 Ga0495587_0004941 3300046536 Bacteria 8740
136 Ga0495645_0003279 3300046543 Bacteria 10974
137 Ga0495667_0003943 3300046559 Bacteria 9949
138 Ga0495667_0006721 3300046559 Bacteria 7807
139 Ga0495634_0017729 3300046642 Bacteria 5077
140 Ga0495623_0017288 3300046679 Unclassified 4659
141 Ga0495623_0028677 3300046679 Unclassified 3581
142 Ga0495646_0022157 3300046680 Bacteria 4008
143 Ga0495658_0008340 3300046683 Bacteria 5132
144 Ga0495613_0029912 3300046689 Bacteria 4047
145 Ga0495613_0059928 3300046689 Bacteria 2788
146 Ga0495604_0000929 3300047317 Bacteria 24388
147 Ga0495604_0014686 3300047317 Bacteria 6242
148 Ga0495674_0001372 3300047319 Bacteria 23745
149 Ga0495674_0006593 3300047319 Bacteria 11134
150 Ga0495674_0035367 3300047319 Unclassified 4508
151 Ga0495676_0004222 3300047321 Bacteria 13120
152 Ga0495680_0001290 3300047322 Bacteria 27330
153 Ga0495680_0020370 3300047322 Bacteria 5582
154 Ga0495680_0075836 3300047322 Bacteria 2551
155 Ga0495675_0000370 3300047444 Bacteria 31077
156 Ga0495675_0000566 3300047444 Bacteria 23905
157 Ga0495675_0004885 3300047444 Bacteria 8163
158 Ga0495684_0002380 3300047471 Bacteria 15034
159 Ga0495684_0003009 3300047471 Bacteria 13271
160 Ga0495684_0022085 3300047471 Bacteria 4899
161 Ga0495684_0042891 3300047471 Bacteria 3464
162 Ga0495602_0000026 3300048088 Bacteria 148063
163 Ga0495602_0004031 3300048088 Bacteria 15294
164 Ga0495602_0013208 3300048088 Bacteria 8447
165 Ga0495614_0002691 3300048089 Bacteria 7902
166 Ga0496115_0063176 3300048918 Bacteria 2987
167 Ga0501047_0041117 3300049581 Bacteria 4468
168 Ga0501070_0038327 3300049586 Bacteria 3999
169 Ga0501044_0001499 3300049823 Bacteria 27357
170 Ga0501044_0006362 3300049823 Bacteria 13055
171 nmdc:mga05p37_2815_c1 3300050507 Bacteria 20229
172 nmdc:mga05p37_3120_c1 3300050507 Bacteria 19261
173 nmdc:mga0qj67_5034_c1 3300050509 Bacteria 9605
174 nmdc:mga0qj67_67563_c1 3300050509 Bacteria 2848
175 nmdc:mga06r32_13614_c1 3300050510 Bacteria 7374
176 nmdc:mga08y16_22046_c1 3300050511 Bacteria 6726
177 nmdc:mga08y16_51402_c1 3300050511 Bacteria 4312
178 nmdc:mga0n895_42716_c1 3300050512 Unclassified 4412
179 nmdc:mga08x19_11_c1 3300050514 Bacteria 403007
180 nmdc:mga08x19_18921_c1 3300050514 Bacteria 4222
181 nmdc:mga08x19_3650_c1 3300050514 Bacteria 9164
182 nmdc:mga08x19_575_c1 3300050514 Bacteria 23955
183 nmdc:mga08x19_646_c1 3300050514 Bacteria 22496
184 nmdc:mga0a205_6436_c1 3300050515 Bacteria 10615
185 Ga0495601_0019031 3300053077 Unclassified 4184
186 2745167411 2744054657 Bacteria 5016802
187 2817620574 2816332336 Bacteria 5207640
188 Ga0265319_1001333
189 Ga0070675_100026041
190 Ga0070703_10000062
191 Ga0070709_10000038
192 Ga0070709_10009644
193 Ga0070709_10016519
194 Ga0070711_100000068
195 Ga0070705_100003687
196 Ga0070708_100012259
197 Ga0068867_100025412
198 Ga0070706_100000959
199 Ga0070707_100000103
200 Ga0070698_100045657
201 Ga0070699_100000011
202 Ga0070697_100011595
203 Ga0070697_100026516
204 Ga0070697_100045995
205 Ga0070696_100000373
206 Ga0070696_100014591
207 Ga0070665_100001404
208 Ga0068855_100002520
209 Ga0068857_100041597
210 Ga0068856_100040609
211 Ga0068863_100069282
212 Ga0068858_100114261
213 Ga0068860_100002166
214 Ga0068862_100047456
215 Ga0070716_100033433
216 Ga0070712_100022181
217 Ga0075428_100001110
218 Ga0075430_100023328
219 Ga0075430_100062378
220 Ga0075434_100013164
221 Ga0075436_100000390
222 Ga0075436_100006648
223 Ga0099794_10002927
224 Ga0105240_10001491
225 Ga0111539_10037755
226 Ga0111539_10118230
227 Ga0114129_10001634
228 Ga0114129_10045303
229 Ga0105248_10008622
230 Ga0105248_10017599
231 Ga0105237_10002953
232 Ga0157378_10000036
233 Ga0163163_10000054
234 Ga0207653_10000131
235 Ga0207699_10000001
236 Ga0207699_10007422
237 Ga0207684_10000619
238 Ga0207695_10014217
239 Ga0207663_10000017
240 Ga0207646_10000005
241 Ga0207646_10023089
242 Ga0207700_10039459
243 Ga0207665_10000182
244 Ga0207665_10009082
245 Ga0207665_10018471
246 Ga0207711_10010114
247 Ga0207661_10030683
248 Ga0207667_10000730
249 Ga0207641_10077124
250 Ga0207641_10099863
251 Ga0207648_10009810
252 Ga0207674_10002051
253 Ga0207683_10059434
254 Ga0209588_1000215
255 Ga0268266_10000072
256 Ga0268265_10034640
257 Ga0268264_10008241
258 Ga0265318_10000111
259 Ga0265330_10015514
260 Ga0265332_10003837
261 Ga0265320_10000087
262 Ga0265325_10001928
263 Ga0265325_10020292
264 Ga0265325_10021623
265 Ga0265329_10000613
266 Ga0265340_10010986
267 Ga0265339_10003850
268 Ga0265331_10000169
269 Ga0265316_10004504
270 Ga0265316_10026237
271 Ga0265313_10002418
272 Ga0307508_10001571
273 Ga0265342_10001590
274 Ga0316578_10009085
275 Ga0316578_10009488
276 Ga0307516_10018321
277 Ga0316577_10009508
278 Ga0316583_10001613
279 Ga0373926_0007810
280 Ga0373934_0002350
281 Ga0373953_0004259
282 Ga0373954_0000138
283 Ga0373957_0002655
284 Ga0373955_0001481
285 Ga0316574_0028367
286 Ga0373933_0000058
287 Ga0373933_0000853
288 Ga0373947_0002993
289 Ga0373947_0010616
290 Ga0373937_0000008
291 Ga0373937_0006375
292 Ga0373937_0055881
293 Ga0316582_0001991
294 Ga0373925_0000165
295 Ga0453684_0034553
296 Ga0453684_0047025
297 Ga0451576_0007966
298 Ga0495629_0059679
299 Ga0495651_0000623
300 Ga0495651_0000624
301 Ga0495651_0004701
302 Ga0495651_0005667
303 Ga0495580_0026454
304 Ga0495582_0009992
305 Ga0495639_0010963
306 Ga0495664_0004292
307 Ga0495608_0024842
308 Ga0495608_0056463
309 Ga0495628_0000100
310 Ga0495628_0026886
311 Ga0495628_0028103
312 Ga0495628_0066385
313 Ga0495630_0002788
314 Ga0495630_0010472
315 Ga0495630_0038866
316 Ga0495666_0009545
317 Ga0495652_0000918
318 Ga0495652_0026651
319 Ga0495652_0027670
320 Ga0495587_0003093
321 Ga0495587_0003521
322 Ga0495587_0004941
323 Ga0495645_0003279
324 Ga0495667_0003943
325 Ga0495667_0006721
326 Ga0495634_0017729
327 Ga0495623_0017288
328 Ga0495623_0028677
329 Ga0495646_0022157
330 Ga0495658_0008340
331 Ga0495613_0029912
332 Ga0495613_0059928
333 Ga0495604_0000929
334 Ga0495604_0014686
335 Ga0495674_0001372
336 Ga0495674_0006593
337 Ga0495674_0035367
338 Ga0495676_0004222
339 Ga0495680_0001290
340 Ga0495680_0020370
341 Ga0495680_0075836
342 Ga0495675_0000370
343 Ga0495675_0000566
344 Ga0495675_0004885
345 Ga0495684_0002380
346 Ga0495684_0003009
347 Ga0495684_0022085
348 Ga0495684_0042891
349 Ga0495602_0000026
350 Ga0495602_0004031
351 Ga0495602_0013208
352 Ga0495614_0002691
353 Ga0496115_0063176
354 Ga0501047_0041117
355 Ga0501070_0038327
356 Ga0501044_0001499
357 Ga0501044_0006362
358 nmdc:mga05p37_2815_c1
359 nmdc:mga05p37_3120_c1
360 nmdc:mga0qj67_5034_c1
361 nmdc:mga0qj67_67563_c1
362 nmdc:mga06r32_13614_c1
363 nmdc:mga08y16_22046_c1
364 nmdc:mga08y16_51402_c1
365 nmdc:mga0n895_42716_c1
366 nmdc:mga08x19_11_c1
367 nmdc:mga08x19_18921_c1
368 nmdc:mga08x19_3650_c1
369 nmdc:mga08x19_575_c1
370 nmdc:mga08x19_646_c1
371 nmdc:mga0a205_6436_c1
372 Ga0495601_0019031
373 2745167411
374 2817620574

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

231

331

0.95

PF16113

ECH_2

Enoyl-CoA hydratase/isomerase

526

669

0.9

PF00378

ECH_1

Enoyl-CoA hydratase/isomerase

523

675

0.85

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

30

228

0.83

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

397

482

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6pvi-assembly1.cif.gz_A crystal structure of phqk in complex with paraherquamide l 0.9737 7 34
2vvm-assembly1.cif.gz_A the structure of mao-n-d5, a variant of monoamine oxidase from aspergillus niger. 0.9527 7 35
6lke-assembly1.cif.gz_B in meso full-length rat kmo in complex with an inhibitor identified via dna-encoded chemical library screening 0.9094 6 39
5dbj-assembly3.cif.gz_D crystal structure of halogenase plta 0.8972 6 35
7v0b-assembly2.cif.gz_C crystal structure of halogenase ctcp from kitasatospora aureofaciens in complex with fad 0.8966 6 35
ID Description Score Start End Superfamily
af_Q2G1C9_445_749_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9537 491 779 3.90.226.10
3kd9B02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9469 3 34 3.50.50.60
af_O13670_11_235_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.945 6 35 3.50.50.60
af_P37631_5_390_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9436 8 35 3.40.50.720
af_Q2G1C9_1_191_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9371 4 205 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2M7UDH5-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.9781 1 433 GO:0006631
GO:0009056
GO:0016616
GO:0070403
AF-A0A553KAK1-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase family protein 0.9781 123 268 GO:0006631
GO:0009056
GO:0016616
GO:0070403
AF-A0A2M8P5G2-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.9776 196 294 GO:0006631
GO:0016616
AF-A0A7Y5WB03-F1-model_v4 Enoyl-CoA hydratase/isomerase family protein 0.9773 1 783 GO:0006635
GO:0016616
GO:0016853
GO:0070403
AF-A0A7Y5WB03-F1-model_v4 Enoyl-CoA hydratase/isomerase family protein 0.9761 1 783 GO:0006635
GO:0016616
GO:0016853
GO:0070403

Map