F287425

General Info

Members Datasets Scaffolds Average Seq Length
187 130 374 427

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10002223|Ga0081539_1000222324
Length 449
Sequence MKSKFSVLTLFLLFLVFNQTSFASEPAEILSRKAVSENTAESAAAIEDLRALGPQGLQSLLAVYAGEIKRHIDDPLLKPDADWQRIAKALDTVSGQKNSYLSGLYWYTDLNDAKKAAAASGKPILSLRLLGKLTDELSCANSRFFRTVLYANPEVASVLRDRFVLHWQSERPAPIITIDFGDGRKLERTITGNSIHYVLDATGQPIEALPGLYGPKAFLRKLSDAEDLFKSLAGKKDQQREFELAGYYVVQNNKLSAGWVEDTAKIGGKLPAGLVVQRGPNGEITAISVAPLAITKAATEINFLRAMTATSEALGRVTDEAAWKKIAQLHASDAILDSRSIALIRRQNPGLSEKEFAAMIQKFQGLIAVDTVRNEYLLRPKLYAWLYRDPSRTDLEKFNAKVYAELFLTPASDPWLGLLSADVYTALDNSGVVDNTISSSARARLKSSP

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
39 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
44 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
45 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
46 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
47 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
109 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
110 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
111 3300049514 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_B_5_drought Metagenome Rhizosphere
112 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
113 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
119 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
120 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
121 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
126 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
127 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
128 2831426010 Nostoc sp. 106C Isolate Unclassified
129 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
130 2849660919 Nostoc sp. T09 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.4
Metatranscriptomes 0
Isolates 1.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.53
Nodule 0
Rhizoplane 0.53
Rhizosphere 96.26
Stem 0
Stem Tuber 0
Unclassified 18.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10002223 3300005985 Bacteria 28295
2 rootH2_10086408 3300003320 Bacteria 18238
3 rootL2_10071324 3300003322 Bacteria 4556
4 Ga0065704_10022409 3300005289 Bacteria 1787
5 Ga0065704_10083040 3300005289 Unclassified 3516
6 Ga0065715_10004272 3300005293 Bacteria 5762
7 Ga0065715_10004400 3300005293 Unclassified 3779
8 Ga0065715_10114550 3300005293 Bacteria 2446
9 Ga0065707_10000982 3300005295 Bacteria 11148
10 Ga0070690_100003423 3300005330 Bacteria 8678
11 Ga0068869_100028249 3300005334 Bacteria 3918
12 Ga0068869_100029971 3300005334 Bacteria 3816
13 Ga0070666_10149384 3300005335 Bacteria 1630
14 Ga0070680_100000868 3300005336 Bacteria 21466
15 Ga0070680_100051098 3300005336 Unclassified 3373
16 Ga0068868_100031047 3300005338 Bacteria 4100
17 Ga0068868_100032444 3300005338 Bacteria 4018
18 Ga0070661_100061944 3300005344 Unclassified 2746
19 Ga0070692_10018823 3300005345 Bacteria 3328
20 Ga0070675_100185023 3300005354 Unclassified 1802
21 Ga0070671_100017699 3300005355 Bacteria 5775
22 Ga0070671_100258254 3300005355 Bacteria 1480
23 Ga0070673_100017256 3300005364 Bacteria 5127
24 Ga0070688_100005062 3300005365 Bacteria 6908
25 Ga0070659_100045739 3300005366 Unclassified 3429
26 Ga0070701_10055973 3300005438 Bacteria 2062
27 Ga0070700_100016408 3300005441 Bacteria 4219
28 Ga0070694_100044973 3300005444 Bacteria 2957
29 Ga0070708_100113600 3300005445 Unclassified 2491
30 Ga0070681_10000032 3300005458 Bacteria 99533
31 Ga0070681_10054827 3300005458 Unclassified 3972
32 Ga0070681_10105384 3300005458 Bacteria 2761
33 Ga0068867_100036076 3300005459 Bacteria 3587
34 Ga0068867_100131735 3300005459 Unclassified 1944
35 Ga0070706_100000137 3300005467 Bacteria 91778
36 Ga0070707_100016333 3300005468 Bacteria 6966
37 Ga0070699_100023231 3300005518 Bacteria 5341
38 Ga0070679_100000331 3300005530 Bacteria 40170
39 Ga0068853_100008694 3300005539 Bacteria 8166
40 Ga0068853_100038619 3300005539 Bacteria 4067
41 Ga0068853_100270505 3300005539 Unclassified 1564
42 Ga0070672_100039898 3300005543 Bacteria 3599
43 Ga0070686_100069482 3300005544 Bacteria 2301
44 Ga0070686_100201688 3300005544 Bacteria 1426
45 Ga0070695_100087616 3300005545 Unclassified 2071
46 Ga0070695_100108717 3300005545 Bacteria 1878
47 Ga0070693_100002371 3300005547 Bacteria 8657
48 Ga0070693_100029955 3300005547 Unclassified 2972
49 Ga0070704_100021528 3300005549 Bacteria 4182
50 Ga0070664_100003300 3300005564 Bacteria 13034
51 Ga0070664_100170411 3300005564 Unclassified 1931
52 Ga0068857_100004422 3300005577 Bacteria 11885
53 Ga0068854_100107602 3300005578 Bacteria 2099
54 Ga0068856_100079292 3300005614 Bacteria 3256
55 Ga0070702_100004202 3300005615 Bacteria 6551
56 Ga0070702_100011522 3300005615 Bacteria 4399
57 Ga0068859_100048430 3300005617 Bacteria 4269
58 Ga0068859_100089312 3300005617 Bacteria 3131
59 Ga0068864_100099953 3300005618 Unclassified 2571
60 Ga0068864_100112373 3300005618 Unclassified 2428
61 Ga0068864_100136583 3300005618 Bacteria 2208
62 Ga0068861_100010640 3300005719 Bacteria 6388
63 Ga0068861_100091961 3300005719 Bacteria 2396
64 Ga0068861_100114809 3300005719 Bacteria 2163
65 Ga0068863_100141232 3300005841 Unclassified 2302
66 Ga0068858_100147400 3300005842 Bacteria 2211
67 Ga0068860_100011705 3300005843 Bacteria 8646
68 Ga0068860_100029121 3300005843 Bacteria 5312
69 Ga0068860_100205350 3300005843 Bacteria 1910
70 Ga0068862_100089866 3300005844 Bacteria 2673
71 Ga0075432_10006587 3300006058 Unclassified 3955
72 Ga0097621_100019858 3300006237 Bacteria 5168
73 Ga0097621_100021483 3300006237 Bacteria 4994
74 Ga0097621_100025429 3300006237 Bacteria 4633
75 Ga0068871_100007057 3300006358 Bacteria 8006
76 Ga0068871_100022001 3300006358 Bacteria 4912
77 Ga0075430_100040150 3300006846 Bacteria 3962
78 Ga0075431_100223164 3300006847 Unclassified 1922
79 Ga0075433_10007504 3300006852 Bacteria 8655
80 Ga0075433_10285227 3300006852 Bacteria 1462
81 Ga0075434_100044255 3300006871 Bacteria 4416
82 Ga0068865_100022028 3300006881 Bacteria 4150
83 Ga0075436_100018528 3300006914 Bacteria 4765
84 Ga0097620_100048430 3300006931 Bacteria 4269
85 Ga0097620_100089307 3300006931 Bacteria 3131
86 Ga0105251_10087314 3300009011 Unclassified 1436
87 Ga0111539_10001877 3300009094 Bacteria 27899
88 Ga0111539_10014810 3300009094 Bacteria 9727
89 Ga0114129_10003077 3300009147 Bacteria 23398
90 Ga0114129_10055884 3300009147 Bacteria 5532
91 Ga0114129_10079096 3300009147 Bacteria 4572
92 Ga0105243_10005877 3300009148 Bacteria 9505
93 Ga0105243_10261695 3300009148 Bacteria 1549
94 Ga0105241_10044763 3300009174 Bacteria 3355
95 Ga0105242_10125431 3300009176 Bacteria 2209
96 Ga0105248_10010126 3300009177 Bacteria 10385
97 Ga0105238_10000058 3300009551 Bacteria 130734
98 Ga0105238_10015472 3300009551 Bacteria 7722
99 Ga0157374_10268730 3300013296 Bacteria 1681
100 Ga0157378_10023809 3300013297 Bacteria 5387
101 Ga0157378_10143143 3300013297 Bacteria 2222
102 Ga0163162_10079058 3300013306 Bacteria 3355
103 Ga0163162_10094495 3300013306 Unclassified 3076
104 Ga0163162_10420236 3300013306 Bacteria 1469
105 Ga0157372_10104522 3300013307 Unclassified 3238
106 Ga0157375_10061947 3300013308 Bacteria 3716
107 Ga0157375_10115028 3300013308 Bacteria 2793
108 Ga0157375_10353721 3300013308 Bacteria 1635
109 Ga0163163_10001494 3300014325 Bacteria 19808
110 Ga0163163_10096432 3300014325 Unclassified 2977
111 Ga0163163_10135184 3300014325 Bacteria 2507
112 Ga0163163_10354693 3300014325 Unclassified 1523
113 Ga0157380_10004317 3300014326 Bacteria 9860
114 Ga0163161_10057842 3300017792 Bacteria 2817
115 Ga0207647_10030092 3300025904 Bacteria 3507
116 Ga0207684_10000314 3300025910 Bacteria 68706
117 Ga0207654_10104625 3300025911 Unclassified 1750
118 Ga0207707_10000062 3300025912 Bacteria 108192
119 Ga0207707_10029495 3300025912 Bacteria 4797
120 Ga0207671_10086296 3300025914 Bacteria 2359
121 Ga0207660_10000300 3300025917 Bacteria 32727
122 Ga0207660_10044131 3300025917 Unclassified 3136
123 Ga0207662_10079902 3300025918 Bacteria 1993
124 Ga0207657_10110788 3300025919 Unclassified 2267
125 Ga0207652_10000175 3300025921 Bacteria 68407
126 Ga0207646_10040526 3300025922 Unclassified 4188
127 Ga0207681_10007233 3300025923 Bacteria 6807
128 Ga0207687_10207567 3300025927 Bacteria 1535
129 Ga0207644_10006809 3300025931 Bacteria 7446
130 Ga0207686_10186485 3300025934 Unclassified 1475
131 Ga0207709_10028373 3300025935 Unclassified 3235
132 Ga0207709_10161115 3300025935 Unclassified 1565
133 Ga0207665_10104793 3300025939 Unclassified 1980
134 Ga0207691_10009466 3300025940 Bacteria 9356
135 Ga0207711_10047474 3300025941 Bacteria 3671
136 Ga0207711_10270234 3300025941 Bacteria 1564
137 Ga0207689_10004392 3300025942 Bacteria 12817
138 Ga0207689_10064327 3300025942 Bacteria 3018
139 Ga0207651_10074785 3300025960 Bacteria 2414
140 Ga0207640_10085417 3300025981 Bacteria 2170
141 Ga0207640_10139997 3300025981 Bacteria 1762
142 Ga0207677_10041066 3300026023 Bacteria 3055
143 Ga0207639_10084529 3300026041 Bacteria 2521
144 Ga0207708_10002025 3300026075 Bacteria 14944
145 Ga0207708_10028127 3300026075 Bacteria 4257
146 Ga0207702_10019429 3300026078 Bacteria 5622
147 Ga0207641_10148369 3300026088 Bacteria 2122
148 Ga0207648_10019364 3300026089 Bacteria 6143
149 Ga0207648_10057719 3300026089 Bacteria 3387
150 Ga0207676_10078675 3300026095 Bacteria 2671
151 Ga0207676_10083625 3300026095 Bacteria 2600
152 Ga0207674_10004909 3300026116 Bacteria 15993
153 Ga0207674_10072460 3300026116 Unclassified 3461
154 Ga0207675_100008782 3300026118 Bacteria 9487
155 Ga0207675_100011502 3300026118 Bacteria 8280
156 Ga0207683_10236179 3300026121 Bacteria 1667
157 Ga0268264_10046991 3300028381 Bacteria 3588
158 Ga0268264_10062764 3300028381 Bacteria 3121
159 Ga0265327_10015892 3300031251 Bacteria 4822
160 Ga0307412_10118450 3300031911 Bacteria 1902
161 Ga0373937_0205327 3300036401 Bacteria 1853
162 Ga0395905_0103188 3300037471 Bacteria 2677
163 Ga0495628_0108980 3300046516 Unclassified 2132
164 Ga0496102_0067762 3300048905 Bacteria 3274
165 Ga0501291_001789 3300049514 Bacteria 2510
166 Ga0501292_005078 3300049515 Bacteria 1822
167 Ga0501298_000250 3300049521 Bacteria 6964
168 Ga0501033_0005441 3300049570 Bacteria 10089
169 Ga0501034_0016332 3300049571 Bacteria 7618
170 Ga0501046_0016404 3300049580 Bacteria 6205
171 Ga0501047_0006114 3300049581 Bacteria 11313
172 Ga0501047_0147147 3300049581 Bacteria 2232
173 Ga0501235_013478 3300049669 Bacteria 1799
174 Ga0501249_009233 3300049679 Bacteria 2051
175 Ga0501253_011888 3300049683 Bacteria 1350
176 Ga0501245_004484 3300049708 Bacteria 1918
177 nmdc:mga05p37_35005_c1 3300050507 Bacteria 6156
178 nmdc:mga08y16_142111_c1 3300050511 Unclassified 2495
179 nmdc:mga08y16_45119_c1 3300050511 Unclassified 4618
180 nmdc:mga08y16_8393_c1 3300050511 Bacteria 10809
181 nmdc:mga0n895_159211_c1 3300050512 Bacteria 2289
182 nmdc:mga08x19_14468_c2 3300050514 Bacteria 2640
183 Ga0500616_0000229 3300053153 Bacteria 87634
184 Ga0501084_0068319 3300054114 Bacteria 2975
185 2831432271 2831426010 Bacteria 8662725
186 2848697192 2848694841 Bacteria 9205737
187 2849668388 2849660919 Bacteria 8251853
188 Ga0081539_10002223
189 rootH2_10086408
190 rootL2_10071324
191 Ga0065704_10022409
192 Ga0065704_10083040
193 Ga0065715_10004272
194 Ga0065715_10004400
195 Ga0065715_10114550
196 Ga0065707_10000982
197 Ga0070690_100003423
198 Ga0068869_100028249
199 Ga0068869_100029971
200 Ga0070666_10149384
201 Ga0070680_100000868
202 Ga0070680_100051098
203 Ga0068868_100031047
204 Ga0068868_100032444
205 Ga0070661_100061944
206 Ga0070692_10018823
207 Ga0070675_100185023
208 Ga0070671_100017699
209 Ga0070671_100258254
210 Ga0070673_100017256
211 Ga0070688_100005062
212 Ga0070659_100045739
213 Ga0070701_10055973
214 Ga0070700_100016408
215 Ga0070694_100044973
216 Ga0070708_100113600
217 Ga0070681_10000032
218 Ga0070681_10054827
219 Ga0070681_10105384
220 Ga0068867_100036076
221 Ga0068867_100131735
222 Ga0070706_100000137
223 Ga0070707_100016333
224 Ga0070699_100023231
225 Ga0070679_100000331
226 Ga0068853_100008694
227 Ga0068853_100038619
228 Ga0068853_100270505
229 Ga0070672_100039898
230 Ga0070686_100069482
231 Ga0070686_100201688
232 Ga0070695_100087616
233 Ga0070695_100108717
234 Ga0070693_100002371
235 Ga0070693_100029955
236 Ga0070704_100021528
237 Ga0070664_100003300
238 Ga0070664_100170411
239 Ga0068857_100004422
240 Ga0068854_100107602
241 Ga0068856_100079292
242 Ga0070702_100004202
243 Ga0070702_100011522
244 Ga0068859_100048430
245 Ga0068859_100089312
246 Ga0068864_100099953
247 Ga0068864_100112373
248 Ga0068864_100136583
249 Ga0068861_100010640
250 Ga0068861_100091961
251 Ga0068861_100114809
252 Ga0068863_100141232
253 Ga0068858_100147400
254 Ga0068860_100011705
255 Ga0068860_100029121
256 Ga0068860_100205350
257 Ga0068862_100089866
258 Ga0075432_10006587
259 Ga0097621_100019858
260 Ga0097621_100021483
261 Ga0097621_100025429
262 Ga0068871_100007057
263 Ga0068871_100022001
264 Ga0075430_100040150
265 Ga0075431_100223164
266 Ga0075433_10007504
267 Ga0075433_10285227
268 Ga0075434_100044255
269 Ga0068865_100022028
270 Ga0075436_100018528
271 Ga0097620_100048430
272 Ga0097620_100089307
273 Ga0105251_10087314
274 Ga0111539_10001877
275 Ga0111539_10014810
276 Ga0114129_10003077
277 Ga0114129_10055884
278 Ga0114129_10079096
279 Ga0105243_10005877
280 Ga0105243_10261695
281 Ga0105241_10044763
282 Ga0105242_10125431
283 Ga0105248_10010126
284 Ga0105238_10000058
285 Ga0105238_10015472
286 Ga0157374_10268730
287 Ga0157378_10023809
288 Ga0157378_10143143
289 Ga0163162_10079058
290 Ga0163162_10094495
291 Ga0163162_10420236
292 Ga0157372_10104522
293 Ga0157375_10061947
294 Ga0157375_10115028
295 Ga0157375_10353721
296 Ga0163163_10001494
297 Ga0163163_10096432
298 Ga0163163_10135184
299 Ga0163163_10354693
300 Ga0157380_10004317
301 Ga0163161_10057842
302 Ga0207647_10030092
303 Ga0207684_10000314
304 Ga0207654_10104625
305 Ga0207707_10000062
306 Ga0207707_10029495
307 Ga0207671_10086296
308 Ga0207660_10000300
309 Ga0207660_10044131
310 Ga0207662_10079902
311 Ga0207657_10110788
312 Ga0207652_10000175
313 Ga0207646_10040526
314 Ga0207681_10007233
315 Ga0207687_10207567
316 Ga0207644_10006809
317 Ga0207686_10186485
318 Ga0207709_10028373
319 Ga0207709_10161115
320 Ga0207665_10104793
321 Ga0207691_10009466
322 Ga0207711_10047474
323 Ga0207711_10270234
324 Ga0207689_10004392
325 Ga0207689_10064327
326 Ga0207651_10074785
327 Ga0207640_10085417
328 Ga0207640_10139997
329 Ga0207677_10041066
330 Ga0207639_10084529
331 Ga0207708_10002025
332 Ga0207708_10028127
333 Ga0207702_10019429
334 Ga0207641_10148369
335 Ga0207648_10019364
336 Ga0207648_10057719
337 Ga0207676_10078675
338 Ga0207676_10083625
339 Ga0207674_10004909
340 Ga0207674_10072460
341 Ga0207675_100008782
342 Ga0207675_100011502
343 Ga0207683_10236179
344 Ga0268264_10046991
345 Ga0268264_10062764
346 Ga0265327_10015892
347 Ga0307412_10118450
348 Ga0373937_0205327
349 Ga0395905_0103188
350 Ga0495628_0108980
351 Ga0496102_0067762
352 Ga0501291_001789
353 Ga0501292_005078
354 Ga0501298_000250
355 Ga0501033_0005441
356 Ga0501034_0016332
357 Ga0501046_0016404
358 Ga0501047_0006114
359 Ga0501047_0147147
360 Ga0501235_013478
361 Ga0501249_009233
362 Ga0501253_011888
363 Ga0501245_004484
364 nmdc:mga05p37_35005_c1
365 nmdc:mga08y16_142111_c1
366 nmdc:mga08y16_45119_c1
367 nmdc:mga08y16_8393_c1
368 nmdc:mga0n895_159211_c1
369 nmdc:mga08x19_14468_c2
370 Ga0500616_0000229
371 Ga0501084_0068319
372 2831432271
373 2848697192
374 2849668388

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ira-assembly1.cif.gz_A the crystal structure of one domain of the conserved protein from methanosarcina mazei go1 0.8296 114 177
1sen-assembly1.cif.gz_A endoplasmic reticulum protein rp19 o95881 0.6795 114 213
2lns-assembly1.cif.gz_B solution structure of agr2 residues 41-175 0.6787 109 175
4ip6-assembly1.cif.gz_A c-terminal domain of the thiol:disulfide interchange protein dsbd, q488a mutant 0.653 118 231
1vrs-assembly3.cif.gz_F crystal structure of the disulfide-linked complex between the n-terminal and c-terminal domain of the electron transfer catalyst dsbd 0.6525 118 231
ID Description Score Start End Superfamily
af_Q54EZ0_261_397_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.684 117 230 3.40.30.10
af_Q9VJ58_132_285_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.6604 114 236 3.40.30.10
af_F1LTZ2_307_471_3.40.30.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.6529 115 228 3.40.30.10
1uc7A00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.6459 112 231 3.40.30.10
1uc7A00 Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin 0.5951 112 231 3.40.30.10
ID Description Score Start End GO Terms
AF-A0A7W0QET9-F1-model_v4 Thioredoxin family protein 0.9076 75 239
AF-A0A317HX69-F1-model_v4 Uncharacterized protein 0.8851 36 412
AF-A0A1Q7WSA1-F1-model_v4 Thioredoxin-like fold domain-containing protein 0.8448 14 287
AF-A0A7Y4WX17-F1-model_v4 Uncharacterized protein 0.8431 12 413
AF-A0A517N0V3-F1-model_v4 Uncharacterized protein 0.837 46 429

Map