F285724

General Info

Members Datasets Scaffolds Average Seq Length
186 87 372 771

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100010617|Ga0068860_1000106173
Length 817
Sequence VIDDEELAGANQRGTKLPTKPVKGTVKAPRRDVKLPPSGSVDSRHMPEPLGYRLKNKLLGPPLHTDRLEHETLGKPTALAVFASDNLSSSAYATEEILRVLVPYVGLAAFALVTPVTVALLVVLGFLILSYRQTIKAYPSAGGAYIVTRDNFGLLPAQVAGVALLTDYVLTVAVSVAAGSDALASAITPLSPYKHWIAIGFVGIIAYGNLRGTKESGKLFAAPTYFFIVNVFILLGVGIYRSLFTSLTKGPTNTKGMLELGGHHGNGFLMGATVWVVLKAFGSGGAAVTGVEAISNGVPAFRPPAWKNARSTLVVMGTLLGIMFLGLSMLAARTHAMPYDDGVPSVISQVGKLVYGPSTLGHVMFYLLQAGTMLILVLAANTSFADFPRLASFHAGDNFMPRQFTIRGHRLVFSNGIIFLSVAAIVTLLATGGEVSRLIPLYAIGVFTSFTLSQAGMAKHHIRLKEDGWRSGLAINGIGALLSLLVLAIVAAVKFTEGAWVIILLVPIMVFGLVRLNKAYEAEEVELKEDAKAAAEAPTLRNHTVIVLVDTLDAATARAMQYARTLTPDELRAVHFDLDSWRTSMLVTSWSELGFARFPLDIIECPDRRMTRTAVELVAHLTGDCDTEVTILIPRREYTKLWHRILHDRSSNSIAAALGDIPHCNVTIVPYHLGSGSAGQAAPSADASSIVSDVTAGSRVARAGQVITGVSAAGLPSDREKIAEVAMRAQATVAGRVRAMRIQPWGGNPSLEVSLADETGSLTLVFTGRRSIPGVALGSLMSVEGLVGEHRGVQAILNPSYTLLFVPPAPENPSEHH

Samples

Sample ID Description Type Environment
1 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
4 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
5 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
6 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
7 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
10 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
16 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
20 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
21 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
22 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
23 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
29 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
30 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
31 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
32 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
33 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
34 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
35 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
36 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
37 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
38 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
39 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
40 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
41 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
42 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
43 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
44 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
45 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
46 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
47 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
48 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
49 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
50 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
51 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
53 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
54 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
55 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
57 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
62 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
63 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
64 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
65 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
66 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
67 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
68 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
69 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
70 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
71 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
72 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
73 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
74 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
75 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
77 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
78 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
79 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
80 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
83 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
84 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
85 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
86 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
87 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.84
Nodule 0
Rhizoplane 3.23
Rhizosphere 91.4
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068860_100010617 3300005843 Bacteria 9095
2 JGI25407J50210_10001063 3300003373 Bacteria 6032
3 Ga0070681_10044400 3300005458 Bacteria 4449
4 Ga0068867_100068287 3300005459 Bacteria 2652
5 Ga0070706_100004736 3300005467 Bacteria 13044
6 Ga0070698_100003558 3300005471 Bacteria 17114
7 Ga0070696_100018045 3300005546 Bacteria 4766
8 Ga0081455_10000630 3300005937 Bacteria 45684
9 Ga0081455_10001599 3300005937 Bacteria 27678
10 Ga0081455_10003515 3300005937 Bacteria 18006
11 Ga0081455_10008258 3300005937 Bacteria 10856
12 Ga0081455_10036601 3300005937 Bacteria 4367
13 Ga0081455_10040383 3300005937 Bacteria 4115
14 Ga0081538_10000022 3300005981 Bacteria 131167
15 Ga0081538_10001499 3300005981 Bacteria 23950
16 Ga0081538_10002543 3300005981 Bacteria 17742
17 Ga0081538_10002593 3300005981 Bacteria 17531
18 Ga0081538_10017545 3300005981 Bacteria 5426
19 Ga0075365_10003115 3300006038 Bacteria 8437
20 Ga0075364_10010948 3300006051 Bacteria 5498
21 Ga0075364_10030656 3300006051 Bacteria 3452
22 Ga0075364_10052935 3300006051 Bacteria 2653
23 Ga0075428_100000315 3300006844 Bacteria 47699
24 Ga0075428_100001250 3300006844 Bacteria 27181
25 Ga0075428_100025430 3300006844 Bacteria 6552
26 Ga0075428_100041754 3300006844 Bacteria 5042
27 Ga0075430_100000273 3300006846 Bacteria 36579
28 Ga0075430_100001075 3300006846 Bacteria 21667
29 Ga0075430_100002661 3300006846 Bacteria 14898
30 Ga0075430_100017807 3300006846 Bacteria 6048
31 Ga0075430_100031315 3300006846 Bacteria 4514
32 Ga0075431_100000062 3300006847 Bacteria 61376
33 Ga0075431_100000274 3300006847 Bacteria 39974
34 Ga0075431_100000670 3300006847 Bacteria 29251
35 Ga0075431_100000967 3300006847 Bacteria 25519
36 Ga0075431_100004688 3300006847 Bacteria 13431
37 Ga0075431_100012114 3300006847 Bacteria 8699
38 Ga0075431_100034551 3300006847 Bacteria 5208
39 Ga0075431_100041791 3300006847 Bacteria 4728
40 Ga0075429_100000011 3300006880 Bacteria 81600
41 Ga0075429_100000367 3300006880 Bacteria 33345
42 Ga0075429_100002449 3300006880 Bacteria 15631
43 Ga0075429_100002742 3300006880 Bacteria 14881
44 Ga0075429_100003834 3300006880 Bacteria 12843
45 Ga0075429_100023018 3300006880 Bacteria 5400
46 Ga0111539_10001351 3300009094 Bacteria 32652
47 Ga0111539_10005790 3300009094 Bacteria 15971
48 Ga0105245_10092439 3300009098 Bacteria 2786
49 Ga0114129_10000292 3300009147 Bacteria 57842
50 Ga0114129_10002851 3300009147 Bacteria 24173
51 Ga0114129_10004557 3300009147 Bacteria 19557
52 Ga0114129_10100237 3300009147 Bacteria 4008
53 Ga0105243_10020926 3300009148 Bacteria 4964
54 Ga0105249_10024542 3300009553 Bacteria 5419
55 Ga0157378_10003878 3300013297 Bacteria 13239
56 Ga0157375_10029377 3300013308 Bacteria 5169
57 Ga0207687_10001683 3300025927 Bacteria 15227
58 Ga0207667_10110707 3300025949 Bacteria 2833
59 Ga0207712_10010541 3300025961 Bacteria 5867
60 Ga0207708_10038939 3300026075 Bacteria 3622
61 Ga0268264_10016885 3300028381 Bacteria 5975
62 Ga0265338_10000324 3300028800 Bacteria 86866
63 Ga0265325_10000717 3300031241 Bacteria 23932
64 Ga0265313_10000263 3300031595 Bacteria 57349
65 Ga0373932_0000096 3300035112 Bacteria 23497
66 Ga0373931_0000010 3300035691 Bacteria 334069
67 Ga0373931_0000120 3300035691 Bacteria 35552
68 Ga0373947_0009539 3300035725 Bacteria 5571
69 Ga0395905_0076890 3300037471 Bacteria 3128
70 Ga0436365_0464200 3300039437 Bacteria 3469
71 Ga0439448_0011108 3300042005 Bacteria 2678
72 Ga0439450_001304 3300042008 Bacteria 3625
73 Ga0439463_005820 3300042016 Bacteria 3060
74 Ga0439464_0004009 3300042439 Bacteria 3748
75 Ga0439460_0003352 3300042461 Bacteria 3882
76 Ga0466961_0022217 3300044693 Bacteria 4082
77 Ga0495630_0026969 3300046517 Bacteria 4258
78 Ga0495665_0029390 3300046531 Bacteria 2945
79 Ga0495635_0059688 3300046663 Bacteria 2623
80 Ga0496104_0108841 3300048907 Bacteria 2656
81 Ga0496109_0015890 3300048912 Bacteria 6573
82 Ga0496110_0007803 3300048913 Bacteria 8575
83 Ga0496112_0002453 3300048915 Bacteria 14960
84 Ga0496112_0003895 3300048915 Bacteria 12487
85 Ga0496114_0005331 3300048917 Bacteria 10051
86 Ga0501031_0024679 3300049568 Bacteria 3919
87 Ga0501034_0000034 3300049571 Bacteria 242608
88 Ga0501036_0004983 3300049572 Bacteria 10737
89 Ga0501036_0008484 3300049572 Bacteria 8422
90 Ga0501036_0099396 3300049572 Bacteria 2460
91 Ga0501038_0017005 3300049574 Bacteria 6582
92 Ga0501038_0029519 3300049574 Bacteria 4858
93 Ga0501039_0016713 3300049575 Bacteria 5622
94 Ga0501039_0020454 3300049575 Bacteria 5072
95 Ga0501040_0002892 3300049576 Bacteria 11098
96 Ga0501040_0004020 3300049576 Bacteria 9552
97 Ga0501040_0023001 3300049576 Bacteria 4176
98 Ga0501041_0001541 3300049577 Bacteria 12819
99 Ga0501041_0022744 3300049577 Bacteria 3755
100 Ga0501041_0024457 3300049577 Bacteria 3626
101 Ga0501042_0003013 3300049578 Bacteria 10480
102 Ga0501042_0021540 3300049578 Bacteria 4494
103 Ga0501042_0075657 3300049578 Bacteria 2409
104 Ga0501043_0017422 3300049579 Bacteria 5631
105 Ga0501043_0085336 3300049579 Bacteria 2481
106 Ga0501046_0015265 3300049580 Bacteria 6459
107 Ga0501048_0001219 3300049582 Bacteria 19471
108 Ga0501048_0010661 3300049582 Bacteria 6856
109 Ga0501048_0020883 3300049582 Bacteria 4797
110 Ga0501048_0021252 3300049582 Bacteria 4752
111 Ga0501067_0043987 3300049583 Bacteria 2481
112 Ga0501068_0000807 3300049584 Bacteria 16266
113 Ga0501068_0009653 3300049584 Bacteria 5402
114 Ga0501068_0016516 3300049584 Bacteria 4256
115 Ga0501070_0003849 3300049586 Bacteria 12945
116 Ga0501070_0006964 3300049586 Bacteria 9615
117 Ga0501071_0003182 3300049587 Bacteria 10215
118 Ga0501071_0003810 3300049587 Bacteria 9483
119 Ga0501071_0006490 3300049587 Bacteria 7591
120 Ga0501072_0000743 3300049588 Bacteria 23787
121 Ga0501072_0042709 3300049588 Bacteria 3561
122 Ga0501072_0051121 3300049588 Bacteria 3254
123 Ga0501073_0002284 3300049589 Bacteria 14337
124 Ga0501073_0007990 3300049589 Bacteria 7854
125 Ga0501074_0007499 3300049590 Bacteria 7893
126 Ga0501074_0024633 3300049590 Bacteria 4372
127 Ga0501074_0052569 3300049590 Bacteria 2940
128 Ga0501075_0000745 3300049591 Bacteria 20259
129 Ga0501075_0010842 3300049591 Bacteria 6425
130 Ga0501075_0079165 3300049591 Bacteria 2487
131 Ga0501076_0004724 3300049592 Bacteria 9719
132 Ga0501076_0008023 3300049592 Bacteria 7712
133 Ga0501076_0030720 3300049592 Bacteria 4185
134 Ga0501077_0005420 3300049593 Bacteria 7757
135 Ga0501077_0006766 3300049593 Bacteria 7055
136 Ga0501077_0062993 3300049593 Bacteria 2352
137 Ga0501079_0002893 3300049741 Bacteria 12541
138 Ga0501079_0005073 3300049741 Bacteria 9780
139 Ga0501079_0014261 3300049741 Bacteria 6058
140 Ga0501079_0085891 3300049741 Bacteria 2435
141 Ga0501080_0007952 3300049742 Bacteria 9607
142 Ga0501081_0068231 3300049743 Bacteria 2475
143 Ga0501083_0013660 3300049744 Bacteria 5678
144 Ga0501044_0000932 3300049823 Bacteria 35145
145 Ga0501045_0005983 3300049824 Bacteria 8414
146 Ga0501045_0080642 3300049824 Bacteria 2399
147 nmdc:mga00v17_5531_c1 3300050491 Bacteria 5141
148 nmdc:mga00v17_7168_c1 3300050491 Bacteria 5939
149 nmdc:mga05p37_2644_c1 3300050507 Bacteria 20857
150 nmdc:mga05p37_277_c1 3300050507 Bacteria 53472
151 nmdc:mga05p37_4351_c1 3300050507 Bacteria 16540
152 nmdc:mga05p37_48669_c1 3300050507 Bacteria 5213
153 nmdc:mga09592_1706_c1 3300050508 Bacteria 17700
154 nmdc:mga09592_21_c1 3300050508 Bacteria 92706
155 nmdc:mga09592_34301_c1 3300050508 Bacteria 4242
156 nmdc:mga09592_397_c1 3300050508 Bacteria 31877
157 nmdc:mga09592_5529_c1 3300050508 Bacteria 10284
158 nmdc:mga09592_68552_c1 3300050508 Bacteria 3009
159 nmdc:mga09592_971_c1 3300050508 Bacteria 22641
160 nmdc:mga09592_97_c1 3300050508 Bacteria 52630
161 nmdc:mga0qj67_108_c1 3300050509 Bacteria 54520
162 nmdc:mga0qj67_1762_c1 3300050509 Bacteria 15319
163 nmdc:mga0qj67_19279_c1 3300050509 Bacteria 5211
164 nmdc:mga06r32_108_c1 3300050510 Bacteria 58516
165 nmdc:mga06r32_11931_c1 3300050510 Bacteria 7829
166 nmdc:mga06r32_14145_c1 3300050510 Bacteria 7237
167 nmdc:mga06r32_2060_c1 3300050510 Bacteria 17993
168 nmdc:mga06r32_2084_c1 3300050510 Bacteria 17895
169 nmdc:mga06r32_37588_c1 3300050510 Bacteria 4580
170 nmdc:mga06r32_4767_c1 3300050510 Bacteria 12196
171 nmdc:mga06r32_8712_c1 3300050510 Bacteria 9142
172 nmdc:mga06r32_92817_c1 3300050510 Bacteria 2952
173 nmdc:mga08y16_29768_c1 3300050511 Bacteria 5749
174 Ga0500566_0000427 3300053094 Bacteria 23401
175 Ga0500616_0001654 3300053153 Bacteria 20606
176 Ga0500616_0009535 3300053153 Bacteria 5900
177 Ga0501084_0002320 3300054114 Bacteria 15286
178 Ga0501084_0002906 3300054114 Bacteria 13869
179 Ga0501084_0056479 3300054114 Bacteria 3284
180 Ga0501084_0100985 3300054114 Bacteria 2422
181 Ga0501082_0003836 3300060353 Bacteria 13145
182 Ga0501082_0050880 3300060353 Bacteria 3572
183 Ga0530510_0001456 3300061734 Bacteria 15869
184 Ga0530510_0006139 3300061734 Bacteria 8344
185 Ga0530510_0009391 3300061734 Bacteria 6858
186 Ga0530510_0033788 3300061734 Bacteria 3682
187 Ga0068860_100010617
188 JGI25407J50210_10001063
189 Ga0070681_10044400
190 Ga0068867_100068287
191 Ga0070706_100004736
192 Ga0070698_100003558
193 Ga0070696_100018045
194 Ga0081455_10000630
195 Ga0081455_10001599
196 Ga0081455_10003515
197 Ga0081455_10008258
198 Ga0081455_10036601
199 Ga0081455_10040383
200 Ga0081538_10000022
201 Ga0081538_10001499
202 Ga0081538_10002543
203 Ga0081538_10002593
204 Ga0081538_10017545
205 Ga0075365_10003115
206 Ga0075364_10010948
207 Ga0075364_10030656
208 Ga0075364_10052935
209 Ga0075428_100000315
210 Ga0075428_100001250
211 Ga0075428_100025430
212 Ga0075428_100041754
213 Ga0075430_100000273
214 Ga0075430_100001075
215 Ga0075430_100002661
216 Ga0075430_100017807
217 Ga0075430_100031315
218 Ga0075431_100000062
219 Ga0075431_100000274
220 Ga0075431_100000670
221 Ga0075431_100000967
222 Ga0075431_100004688
223 Ga0075431_100012114
224 Ga0075431_100034551
225 Ga0075431_100041791
226 Ga0075429_100000011
227 Ga0075429_100000367
228 Ga0075429_100002449
229 Ga0075429_100002742
230 Ga0075429_100003834
231 Ga0075429_100023018
232 Ga0111539_10001351
233 Ga0111539_10005790
234 Ga0105245_10092439
235 Ga0114129_10000292
236 Ga0114129_10002851
237 Ga0114129_10004557
238 Ga0114129_10100237
239 Ga0105243_10020926
240 Ga0105249_10024542
241 Ga0157378_10003878
242 Ga0157375_10029377
243 Ga0207687_10001683
244 Ga0207667_10110707
245 Ga0207712_10010541
246 Ga0207708_10038939
247 Ga0268264_10016885
248 Ga0265338_10000324
249 Ga0265325_10000717
250 Ga0265313_10000263
251 Ga0373932_0000096
252 Ga0373931_0000010
253 Ga0373931_0000120
254 Ga0373947_0009539
255 Ga0395905_0076890
256 Ga0436365_0464200
257 Ga0439448_0011108
258 Ga0439450_001304
259 Ga0439463_005820
260 Ga0439464_0004009
261 Ga0439460_0003352
262 Ga0466961_0022217
263 Ga0495630_0026969
264 Ga0495665_0029390
265 Ga0495635_0059688
266 Ga0496104_0108841
267 Ga0496109_0015890
268 Ga0496110_0007803
269 Ga0496112_0002453
270 Ga0496112_0003895
271 Ga0496114_0005331
272 Ga0501031_0024679
273 Ga0501034_0000034
274 Ga0501036_0004983
275 Ga0501036_0008484
276 Ga0501036_0099396
277 Ga0501038_0017005
278 Ga0501038_0029519
279 Ga0501039_0016713
280 Ga0501039_0020454
281 Ga0501040_0002892
282 Ga0501040_0004020
283 Ga0501040_0023001
284 Ga0501041_0001541
285 Ga0501041_0022744
286 Ga0501041_0024457
287 Ga0501042_0003013
288 Ga0501042_0021540
289 Ga0501042_0075657
290 Ga0501043_0017422
291 Ga0501043_0085336
292 Ga0501046_0015265
293 Ga0501048_0001219
294 Ga0501048_0010661
295 Ga0501048_0020883
296 Ga0501048_0021252
297 Ga0501067_0043987
298 Ga0501068_0000807
299 Ga0501068_0009653
300 Ga0501068_0016516
301 Ga0501070_0003849
302 Ga0501070_0006964
303 Ga0501071_0003182
304 Ga0501071_0003810
305 Ga0501071_0006490
306 Ga0501072_0000743
307 Ga0501072_0042709
308 Ga0501072_0051121
309 Ga0501073_0002284
310 Ga0501073_0007990
311 Ga0501074_0007499
312 Ga0501074_0024633
313 Ga0501074_0052569
314 Ga0501075_0000745
315 Ga0501075_0010842
316 Ga0501075_0079165
317 Ga0501076_0004724
318 Ga0501076_0008023
319 Ga0501076_0030720
320 Ga0501077_0005420
321 Ga0501077_0006766
322 Ga0501077_0062993
323 Ga0501079_0002893
324 Ga0501079_0005073
325 Ga0501079_0014261
326 Ga0501079_0085891
327 Ga0501080_0007952
328 Ga0501081_0068231
329 Ga0501083_0013660
330 Ga0501044_0000932
331 Ga0501045_0005983
332 Ga0501045_0080642
333 nmdc:mga00v17_5531_c1
334 nmdc:mga00v17_7168_c1
335 nmdc:mga05p37_2644_c1
336 nmdc:mga05p37_277_c1
337 nmdc:mga05p37_4351_c1
338 nmdc:mga05p37_48669_c1
339 nmdc:mga09592_1706_c1
340 nmdc:mga09592_21_c1
341 nmdc:mga09592_34301_c1
342 nmdc:mga09592_397_c1
343 nmdc:mga09592_5529_c1
344 nmdc:mga09592_68552_c1
345 nmdc:mga09592_971_c1
346 nmdc:mga09592_97_c1
347 nmdc:mga0qj67_108_c1
348 nmdc:mga0qj67_1762_c1
349 nmdc:mga0qj67_19279_c1
350 nmdc:mga06r32_108_c1
351 nmdc:mga06r32_11931_c1
352 nmdc:mga06r32_14145_c1
353 nmdc:mga06r32_2060_c1
354 nmdc:mga06r32_2084_c1
355 nmdc:mga06r32_37588_c1
356 nmdc:mga06r32_4767_c1
357 nmdc:mga06r32_8712_c1
358 nmdc:mga06r32_92817_c1
359 nmdc:mga08y16_29768_c1
360 Ga0500566_0000427
361 Ga0500616_0001654
362 Ga0500616_0009535
363 Ga0501084_0002320
364 Ga0501084_0002906
365 Ga0501084_0056479
366 Ga0501084_0100985
367 Ga0501082_0003836
368 Ga0501082_0050880
369 Ga0530510_0001456
370 Ga0530510_0006139
371 Ga0530510_0009391
372 Ga0530510_0033788

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13520

AA_permease_2

Amino acid permease

73

514

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gop-assembly2.cif.gz_Y structure and conformational change of a replication protein a heterotrimer bound to ssdna 0.8275 699 773
1gm5-assembly1.cif.gz_A structure of recg bound to three-way dna junction 0.8172 689 773
3e0e-assembly1.cif.gz_A crystal structure of a domain of replication protein a from methanococcus maripaludis. northeast structural genomics targe mrr110b 0.8008 687 770
8i6k-assembly1.cif.gz_A structure of hmnda hin with dsdna 0.7869 686 772
6lbu-assembly1.cif.gz_A crystal structure of yeast stn1 and ten1 0.7829 699 773
ID Description Score Start End Superfamily
af_O07196_36_122_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9155 687 772 2.40.50.140
af_O07196_36_122_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8958 687 772 2.40.50.140
af_P24230_49_139_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8942 687 771 2.40.50.140
af_P9WMQ7_48_140_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8608 692 773 2.40.50.140
af_Q54LW5_190_313_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.8483 686 771 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A6I2X8R5-F1-model_v4 DNA-binding protein 0.9777 684 770
AF-A0A7V9PEW9-F1-model_v4 OB-fold nucleic acid binding domain-containing protein 0.9715 690 772 GO:0003676
AF-A0A2W6D5S9-F1-model_v4 DNA-binding protein 0.9677 686 773 GO:0003677
AF-A0A0A0C4M2-F1-model_v4 DNA-binding protein 0.966 685 773 GO:0003677
AF-A0A543PU64-F1-model_v4 ATP-dependent DNA helicase RecG 0.9658 685 770 GO:0004386

Map