F285435

General Info

Members Datasets Scaffolds Average Seq Length
186 143 184 337

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100002638|Ga0070670_1000026388
Length 355
Sequence MADALNGARILVTGGAGFIGSNFARMAIARWPGAHVHVLDALTYAGNKRNLEDVVDAARLSFQHGDIRDPKAVAAAMEGVTHVVNFAAESMVDRSIDDPGSFVLTDTYGAFVLLEEAKKRGVRKFVQISTDEVYGEVLEGASDEQSPLVPRNPYAASKAGGDRLAYAYFATYGLPVVITRCSNNYGPYQYPEKLIPLFVTNALEDQALPVYGTGKNVRDWIHVEDHCEAIALLLEAEGVEGETFNIGAGNELDVLKITGTILERLGKPASLIRHVEDRPGHDRRYAVDSAKLAKQTGWSPRHSFEQGIADTIDWYGARRDWWEPIKAGEFRAYYEKMYGQRKVLAAGGAHAESGS

Samples

Sample ID Description Type Environment
1 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
2 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
40 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
96 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
99 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
100 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
101 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
102 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
103 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
106 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
110 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
111 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
112 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
115 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
116 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
119 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
120 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
125 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
126 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
127 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
128 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
135 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
136 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
137 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
138 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
139 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
140 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
143 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.85
Metatranscriptomes 1.08
Isolates 1.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.15
Nodule 0
Rhizoplane 10.22
Rhizosphere 87.1
Stem 0
Stem Tuber 0
Unclassified 0.54

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000004 3300002459 Bacteria 152689
2 JGI25406J46586_10041637 3300003203 Bacteria 1615
3 Ga0065714_10064458 3300005288 Bacteria 67915
4 Ga0065712_10000114 3300005290 Bacteria 191810
5 Ga0065715_10093251 3300005293 Bacteria 4753
6 Ga0065715_10094318 3300005293 Bacteria 4376
7 Ga0065715_10234825 3300005293 Bacteria 1220
8 Ga0065707_10091365 3300005295 Bacteria 3960
9 Ga0070683_100007389 3300005329 Bacteria 9282
10 Ga0070670_100002638 3300005331 Bacteria 14819
11 Ga0070677_10034101 3300005333 Bacteria 1964
12 Ga0070666_10007301 3300005335 Bacteria 6809
13 Ga0070661_100019761 3300005344 Bacteria 4801
14 Ga0070692_10000977 3300005345 Bacteria 9778
15 Ga0070692_10040403 3300005345 Bacteria 2386
16 Ga0070692_10046184 3300005345 Bacteria 2250
17 Ga0070675_100000007 3300005354 Bacteria 263394
18 Ga0070671_100276672 3300005355 Bacteria 1427
19 Ga0070674_100010522 3300005356 Bacteria 5598
20 Ga0070673_100126307 3300005364 Bacteria 2141
21 Ga0070688_100202023 3300005365 Bacteria 1391
22 Ga0070659_100075307 3300005366 Bacteria 2690
23 Ga0070705_100091500 3300005440 Bacteria 1896
24 Ga0070700_100000050 3300005441 Bacteria 88421
25 Ga0070694_100059014 3300005444 Bacteria 2612
26 Ga0070708_100174223 3300005445 Bacteria 2010
27 Ga0070663_100016373 3300005455 Bacteria 4814
28 Ga0070662_100105518 3300005457 Bacteria 2139
29 Ga0068867_100249187 3300005459 Bacteria 1444
30 Ga0070706_100000112 3300005467 Bacteria 98639
31 Ga0070706_100001900 3300005467 Bacteria 21581
32 Ga0070707_100287742 3300005468 Unclassified 1597
33 Ga0070698_100235932 3300005471 Bacteria 1762
34 Ga0070684_100000213 3300005535 Bacteria 40774
35 Ga0070697_100004467 3300005536 Bacteria 10756
36 Ga0070697_100111163 3300005536 Bacteria 2284
37 Ga0068853_100186186 3300005539 Bacteria 1885
38 Ga0070672_100059378 3300005543 Bacteria 3009
39 Ga0070686_100000938 3300005544 Bacteria 16782
40 Ga0070695_100001640 3300005545 Bacteria 12570
41 Ga0070695_100043196 3300005545 Bacteria 2865
42 Ga0070695_100064941 3300005545 Bacteria 2375
43 Ga0070693_100067507 3300005547 Bacteria 2096
44 Ga0068855_100490946 3300005563 Bacteria 1335
45 Ga0070664_100000156 3300005564 Bacteria 47186
46 Ga0068859_100059751 3300005617 Bacteria 3840
47 Ga0068861_100157566 3300005719 Bacteria 1869
48 Ga0068858_100056408 3300005842 Bacteria 3631
49 Ga0068860_100015021 3300005843 Bacteria 7567
50 Ga0068860_100090352 3300005843 Bacteria 2917
51 Ga0068860_100116786 3300005843 Bacteria 2553
52 Ga0068862_100009157 3300005844 Bacteria 8199
53 Ga0081538_10119711 3300005981 Bacteria 1268
54 Ga0081539_10001420 3300005985 Bacteria 41183
55 Ga0081539_10116927 3300005985 Bacteria 1331
56 Ga0075428_100003044 3300006844 Bacteria 18300
57 Ga0075431_100036495 3300006847 Bacteria 5062
58 Ga0075431_100414474 3300006847 Bacteria 1347
59 Ga0075433_10062222 3300006852 Bacteria 3269
60 Ga0075434_100011887 3300006871 Bacteria 8231
61 Ga0075434_100060921 3300006871 Bacteria 3754
62 Ga0075429_100044266 3300006880 Bacteria 3873
63 Ga0068865_100007721 3300006881 Bacteria 6630
64 Ga0097620_100059754 3300006931 Bacteria 3840
65 Ga0111539_10009351 3300009094 Bacteria 12377
66 Ga0111539_10075482 3300009094 Bacteria 3971
67 Ga0105245_10063744 3300009098 Bacteria 3329
68 Ga0105247_10000977 3300009101 Bacteria 21542
69 Ga0114129_10004250 3300009147 Bacteria 20239
70 Ga0114129_10081460 3300009147 Bacteria 4499
71 Ga0105248_10046164 3300009177 Bacteria 4882
72 Ga0105249_10005458 3300009553 Bacteria 10975
73 Ga0157378_10002282 3300013297 Bacteria 17031
74 Ga0157378_10002985 3300013297 Bacteria 15028
75 Ga0163162_10012733 3300013306 Bacteria 8215
76 Ga0157372_10299143 3300013307 Bacteria 1872
77 Ga0157375_10007496 3300013308 Bacteria 9544
78 Ga0163163_10000155 3300014325 Bacteria 71598
79 Ga0163163_10000255 3300014325 Bacteria 53900
80 Ga0163163_10018017 3300014325 Bacteria 6597
81 Ga0157380_10001395 3300014326 Bacteria 15768
82 Ga0157379_10124299 3300014968 Bacteria 2321
83 Ga0157376_10152079 3300014969 Bacteria 2088
84 Ga0207710_10000442 3300025900 Bacteria 27055
85 Ga0207680_10008245 3300025903 Bacteria 5108
86 Ga0207684_10000220 3300025910 Bacteria 88359
87 Ga0207684_10002054 3300025910 Bacteria 20726
88 Ga0207662_10034125 3300025918 Bacteria 2969
89 Ga0207649_10006954 3300025920 Bacteria 6148
90 Ga0207650_10000001 3300025925 Bacteria 1545726
91 Ga0207650_10005346 3300025925 Bacteria 8757
92 Ga0207644_10109157 3300025931 Bacteria 2090
93 Ga0207690_10048571 3300025932 Bacteria 2823
94 Ga0207706_10086106 3300025933 Bacteria 2762
95 Ga0207709_10115153 3300025935 Bacteria 1805
96 Ga0207709_10193659 3300025935 Bacteria 1446
97 Ga0207704_10005093 3300025938 Bacteria 6048
98 Ga0207691_10003458 3300025940 Bacteria 15365
99 Ga0207691_10070026 3300025940 Bacteria 3168
100 Ga0207711_10059608 3300025941 Bacteria 3287
101 Ga0207689_10072246 3300025942 Bacteria 2834
102 Ga0207689_10128660 3300025942 Bacteria 2083
103 Ga0207661_10003873 3300025944 Bacteria 10433
104 Ga0207679_10009221 3300025945 Bacteria 6308
105 Ga0207712_10056294 3300025961 Bacteria 2770
106 Ga0207658_10053767 3300025986 Bacteria 2977
107 Ga0207703_10253094 3300026035 Bacteria 1588
108 Ga0207703_10522022 3300026035 Bacteria 1117
109 Ga0207678_10039381 3300026067 Bacteria 4102
110 Ga0207708_10000041 3300026075 Bacteria 126142
111 Ga0207702_10001840 3300026078 Bacteria 20877
112 Ga0207648_10094928 3300026089 Bacteria 2608
113 Ga0207675_100009056 3300026118 Bacteria 9341
114 Ga0207675_100193480 3300026118 Bacteria 1951
115 Ga0207675_100229547 3300026118 Bacteria 1790
116 Ga0207675_100239980 3300026118 Bacteria 1751
117 Ga0207428_10037381 3300027907 Bacteria 3949
118 Ga0268265_10074486 3300028380 Bacteria 2656
119 Ga0268264_10037018 3300028381 Bacteria 4021
120 Ga0265338_10063316 3300028800 Bacteria 3225
121 Ga0265762_1004591 3300030760 Bacteria 2471
122 Ga0265760_10002293 3300031090 Bacteria 5588
123 Ga0316579_10075216 3300031691 Bacteria 1604
124 Ga0307413_10045869 3300031824 Bacteria 2595
125 Ga0373951_0001644 3300035091 Bacteria 5864
126 Ga0373937_0201785 3300036401 Bacteria 1869
127 Ga0316582_0015528 3300036647 Bacteria 4359
128 Ga0316584_0054279 3300036712 Bacteria 2999
129 Ga0395898_0205805 3300037466 Bacteria 1878
130 Ga0436360_0532026 3300039438 Bacteria 4648
131 Ga0439460_0034121 3300042461 Bacteria 1465
132 Ga0451576_0013147 3300045051 Bacteria 9264
133 Ga0451576_0111634 3300045051 Bacteria 2845
134 Ga0451576_0146514 3300045051 Bacteria 2462
135 Ga0451576_0509755 3300045051 Bacteria 1264
136 Ga0495580_0063355 3300046472 Bacteria 2593
137 Ga0495665_0083697 3300046531 Bacteria 1677
138 Ga0495621_0059872 3300046539 Bacteria 1380
139 Ga0495656_0073029 3300046615 Bacteria 1529
140 Ga0495658_0000502 3300046683 Bacteria 21511
141 Ga0495658_0170855 3300046683 Bacteria 1345
142 Ga0495604_0161469 3300047317 Bacteria 1583
143 Ga0496101_0051251 3300048904 Bacteria 2974
144 Ga0496102_0010458 3300048905 Bacteria 7985
145 Ga0496102_0333435 3300048905 Bacteria 1429
146 Ga0496103_0020882 3300048906 Bacteria 3938
147 Ga0496103_0047021 3300048906 Bacteria 2665
148 Ga0496104_0004973 3300048907 Bacteria 11608
149 Ga0496105_0023814 3300048908 Bacteria 4971
150 Ga0496106_0017890 3300048909 Bacteria 5242
151 Ga0496106_0029319 3300048909 Bacteria 4101
152 Ga0496108_0002727 3300048911 Bacteria 14118
153 Ga0496109_0003877 3300048912 Bacteria 12492
154 Ga0496110_0056411 3300048913 Bacteria 3457
155 Ga0496110_0079298 3300048913 Bacteria 2923
156 Ga0496111_0002438 3300048914 Bacteria 11235
157 Ga0496111_0204153 3300048914 Bacteria 1469
158 Ga0496112_0007676 3300048915 Bacteria 9598
159 Ga0496112_0029349 3300048915 Bacteria 5319
160 Ga0496112_0107579 3300048915 Bacteria 2759
161 Ga0496113_0177052 3300048916 Bacteria 1690
162 Ga0501292_003421 3300049515 Bacteria 2121
163 Ga0501298_001944 3300049521 Bacteria 3085
164 Ga0501034_0065710 3300049571 Bacteria 3640
165 Ga0501038_0011324 3300049574 Bacteria 8143
166 Ga0501041_0101384 3300049577 Bacteria 1782
167 Ga0501046_0043247 3300049580 Bacteria 3587
168 Ga0501070_0070189 3300049586 Bacteria 2901
169 Ga0501076_0046431 3300049592 Bacteria 3432
170 Ga0501080_0108389 3300049742 Bacteria 2574
171 nmdc:mga06r32_151580_c1 3300050510 Bacteria 2297
172 nmdc:mga06r32_16976_c1 3300050510 Bacteria 6641
173 nmdc:mga08y16_17576_c1 3300050511 Bacteria 7533
174 nmdc:mga0n895_42955_c1 3300050512 Bacteria 4402
175 nmdc:mga0n895_6430_c1 3300050512 Bacteria 9971
176 nmdc:mga0n895_99380_c1 3300050512 Bacteria 2918
177 nmdc:mga0a205_233143_c1 3300050515 Bacteria 1723
178 nmdc:mga0a205_63789_c1 3300050515 Bacteria 3558
179 Ga0500641_0000456 3300053096 Bacteria 14855
180 Ga0500555_001107 3300053103 Bacteria 8934
181 Ga0500616_0001775 3300053153 Bacteria 19705
182 Ga0500616_0005732 3300053153 Bacteria 8353
183 Ga0590071_022280 3300059421 Bacteria 1495
184 Ga0530510_0117453 3300061734 Bacteria 1951

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039438 Ga0436360_0532026 Ga0436360_0532026_1899_2798 274
2 3300049521 Ga0501298_001944 Ga0501298_001944_35_919 274
3 3300013297 Ga0157378_10002985 Ga0157378_1000298511 284
4 3300005563 Ga0068855_100490946 Ga0068855_1004909462 286
5 iso_pu_bacteria 3006969106 3006971623 293
6 3300048905 Ga0496102_0333435 Ga0496102_0333435_380_1360 294
7 iso_pu_bacteria 2786546548 2787506956 297
8 3300005333 Ga0070677_10034101 Ga0070677_100341012 300
9 3300005843 Ga0068860_100090352 Ga0068860_1000903522 300
10 3300013307 Ga0157372_10299143 Ga0157372_102991432 300
11 3300013308 Ga0157375_10007496 Ga0157375_100074963 300
12 3300026078 Ga0207702_10001840 Ga0207702_1000184016 300
13 3300049586 Ga0501070_0070189 Ga0501070_0070189_1573_2550 300
14 3300005467 Ga0070706_100001900 Ga0070706_10000190018 301
15 3300005471 Ga0070698_100235932 Ga0070698_1002359322 301
16 3300025910 Ga0207684_10002054 Ga0207684_1000205417 301
17 3300025935 Ga0207709_10193659 Ga0207709_101936591 302
18 3300005981 Ga0081538_10119711 Ga0081538_101197112 304
19 3300026118 Ga0207675_100239980 Ga0207675_1002399801 309
20 3300005354 Ga0070675_100000007 Ga0070675_100000007179 312
21 3300005441 Ga0070700_100000050 Ga0070700_10000005019 312
22 3300006871 Ga0075434_100011887 Ga0075434_1000118875 312
23 3300026075 Ga0207708_10000041 Ga0207708_10000041120 312
24 3300050512 nmdc:mga0n895_42955_c1 nmdc:mga0n895_42955_c1_952_1962 312
25 3300005293 Ga0065715_10234825 Ga0065715_102348251 313
26 3300005985 Ga0081539_10116927 Ga0081539_101169271 313
27 3300006844 Ga0075428_100003044 Ga0075428_1000030444 313
28 3300006847 Ga0075431_100036495 Ga0075431_1000364952 313
29 3300006880 Ga0075429_100044266 Ga0075429_1000442662 313
30 3300009094 Ga0111539_10075482 Ga0111539_100754822 313
31 3300009147 Ga0114129_10004250 Ga0114129_1000425014 313
32 3300031691 Ga0316579_10075216 Ga0316579_100752162 313
33 3300036647 Ga0316582_0015528 Ga0316582_0015528_761_1777 313
34 3300036712 Ga0316584_0054279 Ga0316584_0054279_1243_2259 313
35 3300046615 Ga0495656_0073029 Ga0495656_0073029_92_1105 313
36 3300046683 Ga0495658_0000502 Ga0495658_0000502_752_1783 313
37 3300050510 nmdc:mga06r32_16976_c1 nmdc:mga06r32_16976_c1_2311_3324 313
38 3300050512 nmdc:mga0n895_6430_c1 nmdc:mga0n895_6430_c1_650_1681 313
39 3300061734 Ga0530510_0117453 Ga0530510_0117453_90_1106 313
40 3300005288 Ga0065714_10064458 Ga0065714_100644582 314
41 3300005290 Ga0065712_10000114 Ga0065712_1000011487 314
42 3300005293 Ga0065715_10093251 Ga0065715_100932512 314
43 3300005329 Ga0070683_100007389 Ga0070683_1000073896 314
44 3300005335 Ga0070666_10007301 Ga0070666_100073017 314
45 3300005344 Ga0070661_100019761 Ga0070661_1000197613 314
46 3300005355 Ga0070671_100276672 Ga0070671_1002766722 314
47 3300005356 Ga0070674_100010522 Ga0070674_1000105221 314
48 3300005445 Ga0070708_100174223 Ga0070708_1001742231 314
49 3300005455 Ga0070663_100016373 Ga0070663_1000163734 314
50 3300005457 Ga0070662_100105518 Ga0070662_1001055182 314
51 3300005535 Ga0070684_100000213 Ga0070684_10000021318 314
52 3300005543 Ga0070672_100059378 Ga0070672_1000593783 314
53 3300005547 Ga0070693_100067507 Ga0070693_1000675072 314
54 3300005564 Ga0070664_100000156 Ga0070664_10000015639 314
55 3300005719 Ga0068861_100157566 Ga0068861_1001575662 314
56 3300009094 Ga0111539_10009351 Ga0111539_100093519 314
57 3300009147 Ga0114129_10081460 Ga0114129_100814602 314
58 3300009177 Ga0105248_10046164 Ga0105248_100461643 314
59 3300014325 Ga0163163_10018017 Ga0163163_100180176 314
60 3300025903 Ga0207680_10008245 Ga0207680_100082451 314
61 3300025920 Ga0207649_10006954 Ga0207649_100069544 314
62 3300025931 Ga0207644_10109157 Ga0207644_101091573 314
63 3300025940 Ga0207691_10070026 Ga0207691_100700263 314
64 3300025941 Ga0207711_10059608 Ga0207711_100596083 314
65 3300025944 Ga0207661_10003873 Ga0207661_100038735 314
66 3300025945 Ga0207679_10009221 Ga0207679_100092213 314
67 3300025986 Ga0207658_10053767 Ga0207658_100537672 314
68 3300026067 Ga0207678_10039381 Ga0207678_100393814 314
69 3300026118 Ga0207675_100009056 Ga0207675_1000090567 314
70 3300027907 Ga0207428_10037381 Ga0207428_100373813 314
71 3300031824 Ga0307413_10045869 Ga0307413_100458692 314
72 3300042461 Ga0439460_0034121 Ga0439460_0034121_94_1110 314
73 3300048904 Ga0496101_0051251 Ga0496101_0051251_567_1583 314
74 3300048907 Ga0496104_0004973 Ga0496104_0004973_6181_7197 314
75 3300048908 Ga0496105_0023814 Ga0496105_0023814_3629_4645 314
76 3300048909 Ga0496106_0029319 Ga0496106_0029319_352_1374 314
77 3300048911 Ga0496108_0002727 Ga0496108_0002727_1994_3010 314
78 3300048912 Ga0496109_0003877 Ga0496109_0003877_11258_12274 314
79 3300048913 Ga0496110_0079298 Ga0496110_0079298_1580_2596 314
80 3300048914 Ga0496111_0002438 Ga0496111_0002438_6410_7426 314
81 3300048915 Ga0496112_0007676 Ga0496112_0007676_4006_5022 314
82 3300048916 Ga0496113_0177052 Ga0496113_0177052_570_1586 314
83 3300050510 nmdc:mga06r32_151580_c1 nmdc:mga06r32_151580_c1_214_1230 314
84 3300050511 nmdc:mga08y16_17576_c1 nmdc:mga08y16_17576_c1_2666_3682 314
85 3300059421 Ga0590071_022280 Ga0590071_022280_144_1160 314
86 3300005345 Ga0070692_10000977 Ga0070692_100009777 315
87 3300005536 Ga0070697_100111163 Ga0070697_1001111632 315
88 3300005545 Ga0070695_100043196 Ga0070695_1000431962 315
89 3300005843 Ga0068860_100015021 Ga0068860_1000150213 315
90 3300005844 Ga0068862_100009157 Ga0068862_1000091576 315
91 3300006871 Ga0075434_100060921 Ga0075434_1000609212 315
92 3300009098 Ga0105245_10063744 Ga0105245_100637443 315
93 3300009553 Ga0105249_10005458 Ga0105249_100054586 315
94 3300013306 Ga0163162_10012733 Ga0163162_100127335 315
95 3300014968 Ga0157379_10124299 Ga0157379_101242992 315
96 3300025942 Ga0207689_10072246 Ga0207689_100722462 315
97 3300025942 Ga0207689_10128660 Ga0207689_101286602 315
98 3300025961 Ga0207712_10056294 Ga0207712_100562942 315
99 3300026118 Ga0207675_100193480 Ga0207675_1001934802 315
100 3300028381 Ga0268264_10037018 Ga0268264_100370182 315
101 3300030760 Ga0265762_1004591 Ga0265762_10045912 315
102 3300031090 Ga0265760_10002293 Ga0265760_100022933 315
103 3300036401 Ga0373937_0201785 Ga0373937_0201785_788_1831 315
104 3300045051 Ga0451576_0111634 Ga0451576_0111634_144_1187 315
105 3300046472 Ga0495580_0063355 Ga0495580_0063355_779_1831 315
106 3300046531 Ga0495665_0083697 Ga0495665_0083697_346_1398 315
107 3300046683 Ga0495658_0170855 Ga0495658_0170855_40_1062 315
108 3300047317 Ga0495604_0161469 Ga0495604_0161469_78_1121 315
109 3300048905 Ga0496102_0010458 Ga0496102_0010458_695_1714 315
110 3300048906 Ga0496103_0047021 Ga0496103_0047021_1166_2209 315
111 3300048909 Ga0496106_0017890 Ga0496106_0017890_2129_3148 315
112 3300048913 Ga0496110_0056411 Ga0496110_0056411_120_1139 315
113 3300048914 Ga0496111_0204153 Ga0496111_0204153_239_1258 315
114 3300048915 Ga0496112_0029349 Ga0496112_0029349_2095_3114 315
115 3300050512 nmdc:mga0n895_99380_c1 nmdc:mga0n895_99380_c1_355_1398 315
116 3300050515 nmdc:mga0a205_233143_c1 nmdc:mga0a205_233143_c1_597_1640 315
117 3300050515 nmdc:mga0a205_63789_c1 nmdc:mga0a205_63789_c1_365_1408 315
118 3300053096 Ga0500641_0000456 Ga0500641_0000456_8495_9514 315
119 3300053103 Ga0500555_001107 Ga0500555_001107_493_1512 315
120 3300053153 Ga0500616_0001775 Ga0500616_0001775_6693_7712 315
121 3300005366 Ga0070659_100075307 Ga0070659_1000753071 316
122 3300005467 Ga0070706_100000112 Ga0070706_10000011217 316
123 3300005468 Ga0070707_100287742 Ga0070707_1002877421 316
124 3300005536 Ga0070697_100004467 Ga0070697_1000044671 316
125 3300006847 Ga0075431_100414474 Ga0075431_1004144741 316
126 3300014325 Ga0163163_10000155 Ga0163163_1000015543 316
127 3300014969 Ga0157376_10152079 Ga0157376_101520792 316
128 3300025910 Ga0207684_10000220 Ga0207684_1000022014 316
129 3300025932 Ga0207690_10048571 Ga0207690_100485713 316
130 3300026035 Ga0207703_10253094 Ga0207703_102530942 316
131 3300045051 Ga0451576_0013147 Ga0451576_0013147_4065_5087 316
132 3300045051 Ga0451576_0146514 Ga0451576_0146514_137_1171 316
133 3300048906 Ga0496103_0020882 Ga0496103_0020882_2448_3494 316
134 3300049571 Ga0501034_0065710 Ga0501034_0065710_701_1723 316
135 3300049577 Ga0501041_0101384 Ga0501041_0101384_200_1234 316
136 3300049580 Ga0501046_0043247 Ga0501046_0043247_696_1730 316
137 3300049592 Ga0501076_0046431 Ga0501076_0046431_410_1444 316
138 3300049742 Ga0501080_0108389 Ga0501080_0108389_1098_2132 316
139 3300005331 Ga0070670_100002638 Ga0070670_1000026388 317
140 3300005545 Ga0070695_100001640 Ga0070695_1000016404 317
141 3300025925 Ga0207650_10005346 Ga0207650_100053465 317
142 3300028800 Ga0265338_10063316 Ga0265338_100633163 317
143 3300045051 Ga0451576_0509755 Ga0451576_0509755_136_1185 317
144 3300005539 Ga0068853_100186186 Ga0068853_1001861862 318
145 3300035091 Ga0373951_0001644 Ga0373951_0001644_2630_3646 318
146 3300048915 Ga0496112_0107579 Ga0496112_0107579_37_1053 318
147 3300005364 Ga0070673_100126307 Ga0070673_1001263072 319
148 3300005365 Ga0070688_100202023 Ga0070688_1002020231 319
149 3300005440 Ga0070705_100091500 Ga0070705_1000915002 319
150 3300005459 Ga0068867_100249187 Ga0068867_1002491872 319
151 3300006881 Ga0068865_100007721 Ga0068865_1000077212 319
152 3300025918 Ga0207662_10034125 Ga0207662_100341252 319
153 3300025933 Ga0207706_10086106 Ga0207706_100861061 319
154 3300025935 Ga0207709_10115153 Ga0207709_101151532 319
155 3300025938 Ga0207704_10005093 Ga0207704_100050936 319
156 3300025940 Ga0207691_10003458 Ga0207691_1000345814 319
157 3300026035 Ga0207703_10522022 Ga0207703_105220221 319
158 3300026089 Ga0207648_10094928 Ga0207648_100949282 319
159 3300026118 Ga0207675_100229547 Ga0207675_1002295472 319
160 3300028380 Ga0268265_10074486 Ga0268265_100744863 319
161 3300003203 JGI25406J46586_10041637 JGI25406J46586_100416371 320
162 3300005985 Ga0081539_10001420 Ga0081539_1000142024 320
163 3300006852 Ga0075433_10062222 Ga0075433_100622224 320
164 3300002459 JGI24751J29686_10000004 JGI24751J29686_1000000494 321
165 3300005293 Ga0065715_10094318 Ga0065715_100943181 321
166 3300005295 Ga0065707_10091365 Ga0065707_100913652 321
167 3300005345 Ga0070692_10040403 Ga0070692_100404031 321
168 3300005345 Ga0070692_10046184 Ga0070692_100461842 321
169 3300005444 Ga0070694_100059014 Ga0070694_1000590143 321
170 3300005544 Ga0070686_100000938 Ga0070686_10000093813 321
171 3300005545 Ga0070695_100064941 Ga0070695_1000649412 321
172 3300005617 Ga0068859_100059751 Ga0068859_1000597513 321
173 3300005842 Ga0068858_100056408 Ga0068858_1000564083 321
174 3300005843 Ga0068860_100116786 Ga0068860_1001167862 321
175 3300006931 Ga0097620_100059754 Ga0097620_1000597543 321
176 3300009101 Ga0105247_10000977 Ga0105247_100009774 321
177 3300013297 Ga0157378_10002282 Ga0157378_1000228210 321
178 3300014325 Ga0163163_10000255 Ga0163163_1000025534 321
179 3300014326 Ga0157380_10001395 Ga0157380_1000139511 321
180 3300025900 Ga0207710_10000442 Ga0207710_100004424 321
181 3300025925 Ga0207650_10000001 Ga0207650_10000001811 321
182 3300037466 Ga0395898_0205805 Ga0395898_0205805_774_1799 321
183 3300046539 Ga0495621_0059872 Ga0495621_0059872_210_1235 321
184 3300049515 Ga0501292_003421 Ga0501292_003421_830_1855 321
185 3300049574 Ga0501038_0011324 Ga0501038_0011324_1387_2412 321
186 3300053153 Ga0500616_0005732 Ga0500616_0005732_7232_8299 321

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

10

247

0.98

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

11

311

0.94

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

11

248

0.89

PF07993

NAD_binding_4

Male sterility protein

12

189

0.77

PF04321

RmlD_sub_bind

RmlD substrate binding domain

8

316

0.75

PF13460

NAD_binding_10

NAD(P)H-binding

14

182

0.71

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

10

282

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hun-assembly1.cif.gz_B crystal structure of hypothetical protein ph0414 from pyrococcus horikoshii ot3 0.9235 1 304
1r66-assembly1.cif.gz_A-2 crystal structure of desiv (dtdp-glucose 4,6-dehydratase) from streptomyces venezuelae with nad and tyd bound 0.9123 3 301
2hun-assembly1.cif.gz_A crystal structure of hypothetical protein ph0414 from pyrococcus horikoshii ot3 0.9057 1 301
1r6d-assembly1.cif.gz_A-2 crystal structure of desiv double mutant (dtdp-glucose 4,6-dehydratase) from streptomyces venezuelae with nad and dau bound 0.902 1 301
8shh-assembly1.cif.gz_B crystal structure of evds6 decarboxylase in ligand free state 0.9017 1 302
ID Description Score Start End Superfamily
2hunB02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9294 160 304 3.90.25.10
2hunB02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9122 160 304 3.90.25.10
1r6dA02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.9116 160 301 3.90.25.10
af_Q7JZB1_1_323_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9114 3 35 3.40.50.720
af_A0A1D8PD33_3_352_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9034 4 35 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2X1PPC2-F1-model_v4 dTDP-glucose 46-dehydratase (EC 4.2.1.46) 0.991 154 242 GO:0008460
AF-A0A662PL15-F1-model_v4 dTDP-glucose 4,6-dehydratase 0.9752 156 303
AF-A0A2M6Y005-F1-model_v4 dTDP-glucose 4,6-dehydratase 0.9745 154 301
AF-A0A1V5IPG3-F1-model_v4 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 0.9724 154 316 GO:0008460
AF-A0A7W7PVF3-F1-model_v4 dTDP-D-glucose 4,6-dehydratase 0.9708 156 301

Feature Viewer

pLDDT pTM Quality
86.83 0.88 High
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Predicted Structure (AlphaFold2)

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