F285194

General Info

Members Datasets Scaffolds Average Seq Length
185 152 370 214

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2990044586|2990046182
Length 251
Sequence QVFSWSRNATMPRMTGLRERKKRQTRQHISDVATGLFMERGFDAVTVAEVAEAAEVSVNTVYNYFPAKEDLFFDREEETVDRPSARVRDRAPGQSAAEAVLDGLREDIDRRPVNLGMVDGFDRFVAVVTGSHSLLARLMGMQYQTTAQLGRTLAQETGSEPGDPLPELVAAHLMAVHANLHQTVRHAYRAGHDVEELRADLLRRLDLSERLLSDEVRDFARRPLDESAQPGGRPRPAPSDDEEFRCRRSTR

Samples

Sample ID Description Type Environment
1 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
4 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
5 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
6 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
7 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
8 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
9 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
10 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
11 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
12 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
13 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
14 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
15 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
16 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
17 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
18 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
19 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
20 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
21 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
22 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
23 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
24 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
25 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
26 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
27 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
28 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
29 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
30 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
31 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
32 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
33 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
34 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
35 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
36 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
37 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
38 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
39 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
40 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
41 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
42 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
43 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
44 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
45 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
46 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
47 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
48 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
49 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
50 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
51 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
52 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
53 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
54 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
55 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
56 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
57 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
58 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
59 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
60 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
61 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
62 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
63 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
64 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
65 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
66 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
67 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
68 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
69 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
70 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
71 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
72 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
73 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
74 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
75 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
94 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
95 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
96 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
97 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
98 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
99 2643221578 Streptomyces sp. Root63 Isolate Unclassified
100 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
101 2643221670 Streptomyces sp. Root431 Isolate Unclassified
102 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
103 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
104 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
105 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
106 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
107 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
108 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
109 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
110 2808606448 Streptomyces sp. 193411 Isolate Unclassified
111 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
112 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
113 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
114 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
115 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
116 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
117 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
118 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
119 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
120 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
121 2867475112 Streptomyces sp. TM32 Isolate Unclassified
122 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
123 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
124 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
125 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
126 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
127 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
128 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
129 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
130 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
131 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
132 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
133 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
134 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
135 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
136 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
137 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
138 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
139 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
140 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
141 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
142 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
143 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
144 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
145 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
146 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
147 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
148 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
149 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
150 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
151 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
152 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 64.86
Metatranscriptomes 0
Isolates 35.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.24
Nodule 1.08
Rhizoplane 1.08
Rhizosphere 75.14
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24738J21930_10018358 3300002075 Bacteria 1462
2 JGI25160J50197_1020505 3300003354 Bacteria 1992
3 JGI25160J50197_1028965 3300003354 Bacteria 1475
4 JGI25160J50197_1030933 3300003354 Bacteria 1387
5 Ga0070685_10061261 3300005466 Bacteria 2203
6 Ga0068853_100013915 3300005539 Bacteria 6579
7 Ga0068857_101176342 3300005577 Bacteria 742
8 Ga0068854_100342648 3300005578 Bacteria 1221
9 Ga0070715_10178942 3300006163 Bacteria 1062
10 Ga0105246_10080649 3300011119 Bacteria 2317
11 Ga0157369_10231482 3300013105 Bacteria 1932
12 Ga0157374_10986544 3300013296 Bacteria 861
13 Ga0157372_10048975 3300013307 Bacteria 4697
14 Ga0207426_1001450 3300025302 Bacteria 19608
15 Ga0207426_1004324 3300025302 Bacteria 7000
16 Ga0207685_10137850 3300025905 Bacteria 1090
17 Ga0207639_10009943 3300026041 Bacteria 6573
18 Ga0207702_10151962 3300026078 Bacteria 2107
19 Ga0307515_10067590 3300028794 Bacteria 4926
20 Ga0307512_10010457 3300030522 Bacteria 8845
21 Ga0307512_10033007 3300030522 Bacteria 4460
22 Ga0307509_10020972 3300031507 Bacteria 7403
23 Ga0307408_100437371 3300031548 Bacteria 1132
24 Ga0307410_10553988 3300031852 Bacteria 953
25 Ga0307416_100037301 3300032002 Bacteria 3738
26 Ga0395899_0533032 3300037312 Bacteria 757
27 Ga0395900_0126055 3300037418 Bacteria 2626
28 Ga0395898_0005304 3300037466 Bacteria 13942
29 Ga0395898_0070135 3300037466 Bacteria 3389
30 Ga0395901_0217829 3300038443 Bacteria 1996
31 Ga0439436_0005320 3300041404 Bacteria 3946
32 Ga0439439_0005033 3300041406 Bacteria 3003
33 Ga0451853_3911094 3300041512 Bacteria 5907
34 Ga0439433_0039450 3300041999 Bacteria 1096
35 Ga0439449_0183387 3300042007 Bacteria 783
36 Ga0439457_003797 3300042014 Bacteria 4054
37 Ga0450894_000022 3300042131 Bacteria 21795
38 Ga0450895_001516 3300042132 Bacteria 1621
39 Ga0450896_001574 3300042133 Bacteria 2836
40 Ga0450898_001140 3300042134 Bacteria 3411
41 Ga0450899_000053 3300042135 Bacteria 9240
42 Ga0450903_000215 3300042138 Bacteria 12874
43 Ga0466972_0031300 3300044658 Bacteria 2618
44 Ga0466965_0048374 3300044683 Bacteria 2107
45 Ga0466965_0250464 3300044683 Bacteria 950
46 Ga0466961_0096620 3300044693 Bacteria 1863
47 Ga0466957_0119135 3300044842 Bacteria 1681
48 Ga0466960_0150102 3300044901 Bacteria 1244
49 Ga0466958_0298467 3300045836 Bacteria 1034
50 Ga0466967_0171188 3300045976 Bacteria 2043
51 Ga0495603_0209325 3300046455 Bacteria 1126
52 Ga0495629_0166419 3300046459 Bacteria 1531
53 Ga0495580_0230920 3300046472 Bacteria 1270
54 Ga0495662_0170622 3300046476 Bacteria 1072
55 Ga0495664_0065942 3300046477 Bacteria 2159
56 Ga0495585_0184989 3300046492 Bacteria 1069
57 Ga0495583_0035282 3300046506 Bacteria 2388
58 Ga0495618_0043094 3300046514 Bacteria 2847
59 Ga0495628_0197178 3300046516 Bacteria 1518
60 Ga0495666_0041453 3300046526 Bacteria 2229
61 Ga0495640_0349051 3300046533 Bacteria 913
62 Ga0495645_0082944 3300046543 Bacteria 2298
63 Ga0495634_0029526 3300046642 Bacteria 3795
64 Ga0495611_0053710 3300046648 Bacteria 1819
65 Ga0495625_0207811 3300046660 Bacteria 1288
66 Ga0495657_0161232 3300046675 Bacteria 1387
67 Ga0495646_0158374 3300046680 Bacteria 1255
68 Ga0495613_0048579 3300046689 Bacteria 3133
69 Ga0495624_0011090 3300046690 Bacteria 6202
70 Ga0495589_0038085 3300046794 Bacteria 2408
71 Ga0495600_0123058 3300046809 Bacteria 1687
72 Ga0495660_0141352 3300046810 Bacteria 1197
73 Ga0495581_0066852 3300047315 Bacteria 2078
74 Ga0495676_0053908 3300047321 Bacteria 3200
75 Ga0495687_024244 3300047443 Bacteria 2885
76 Ga0495675_0006189 3300047444 Bacteria 7323
77 Ga0495681_0003919 3300047470 Bacteria 10262
78 Ga0495686_0006808 3300047472 Bacteria 8675
79 Ga0495593_0093582 3300047673 Bacteria 1546
80 Ga0495614_0014383 3300048089 Bacteria 3463
81 Ga0501031_0176359 3300049568 Bacteria 1396
82 Ga0501032_0037569 3300049569 Bacteria 3301
83 Ga0501032_0079941 3300049569 Bacteria 2176
84 Ga0501032_0239472 3300049569 Bacteria 1179
85 Ga0501033_0032719 3300049570 Bacteria 3905
86 Ga0501033_0051828 3300049570 Bacteria 3042
87 Ga0501033_0122649 3300049570 Bacteria 1885
88 Ga0501033_0156440 3300049570 Bacteria 1642
89 Ga0501034_0009935 3300049571 Bacteria 9946
90 Ga0501034_0021474 3300049571 Bacteria 6580
91 Ga0501034_0043601 3300049571 Bacteria 4539
92 Ga0501034_0109263 3300049571 Bacteria 2756
93 Ga0501036_0000553 3300049572 Bacteria 26858
94 Ga0501036_0299339 3300049572 Bacteria 1345
95 Ga0501037_0020764 3300049573 Bacteria 4849
96 Ga0501037_0024590 3300049573 Bacteria 4454
97 Ga0501038_0002207 3300049574 Bacteria 18105
98 Ga0501039_0013796 3300049575 Bacteria 6182
99 Ga0501042_0523690 3300049578 Bacteria 861
100 Ga0501043_0167629 3300049579 Bacteria 1714
101 Ga0501043_0297587 3300049579 Bacteria 1234
102 Ga0501046_0010583 3300049580 Bacteria 7915
103 Ga0501046_0129133 3300049580 Bacteria 1917
104 Ga0501047_0009530 3300049581 Bacteria 9179
105 Ga0501047_0015497 3300049581 Bacteria 7262
106 Ga0501047_0017015 3300049581 Bacteria 6951
107 Ga0501047_0179887 3300049581 Bacteria 1981
108 Ga0501047_0647799 3300049581 Bacteria 876
109 Ga0501048_0065058 3300049582 Bacteria 2578
110 Ga0501070_0000903 3300049586 Bacteria 27034
111 Ga0501074_0007022 3300049590 Bacteria 8130
112 Ga0501080_0071615 3300049742 Bacteria 3224
113 Ga0501080_0499345 3300049742 Bacteria 1087
114 Ga0501035_0004257 3300049822 Bacteria 13582
115 Ga0501035_0027770 3300049822 Bacteria 5171
116 Ga0501035_0036364 3300049822 Bacteria 4463
117 Ga0501044_0009230 3300049823 Bacteria 10770
118 Ga0501044_0405330 3300049823 Bacteria 1275
119 Ga0501044_0455463 3300049823 Bacteria 1185
120 Ga0500641_0029680 3300053096 Bacteria 2144
121 2990046182 2990044586 Bacteria 6603797
122 2547408394 2547132111 Bacteria 8013147
123 2585309053 2582581313 Bacteria 10042643
124 2616697295 2616644814 Bacteria 11555299
125 2616903239 2616644941 Bacteria 8510691
126 2643902262 2643221578 Bacteria 9213798
127 2643943908 2643221587 Bacteria 7586415
128 2644386895 2643221670 Bacteria 6497041
129 2644403832 2643221673 Bacteria 9196637
130 2644434645 2643221677 Bacteria 7584031
131 2768643008 2767802112 Bacteria 6465194
132 2784590411 2784132148 Bacteria 8627943
133 2785341204 2784746763 Bacteria 9783172
134 2785371499 2784746768 Bacteria 10036182
135 2793976886 2791355406 Bacteria 11364898
136 2793985481 2791355406 Bacteria 11364898
137 2808913622 2808606375 Bacteria 9466072
138 2809234084 2808606448 Bacteria 8656184
139 2812355945 2811994879 Bacteria 9313447
140 2812478755 2811994917 Bacteria 7761064
141 2819694631 2818991463 Bacteria 7948711
142 2862186410 2862178590 Bacteria 8583590
143 2862284749 2862281513 Bacteria 9621493
144 2862291060 2862290372 Bacteria 7471434
145 2862390425 2862382967 Bacteria 10317375
146 2862707907 2862705112 Bacteria 6563286
147 2866614320 2866612099 Bacteria 7543886
148 2867349168 2867346516 Bacteria 7608576
149 2867476805 2867475112 Bacteria 6909112
150 2873154056 2873151551 Bacteria 8625867
151 2884698940 2884693830 Bacteria 11273186
152 2891397771 2891395885 Bacteria 9251614
153 2891554441 2891554331 Bacteria 8812224
154 2895429898 2895427314 Bacteria 13147766
155 2895449192 2895442618 Bacteria 11027144
156 2912730169 2912723979 Bacteria 8557534
157 2918506504 2918501144 Bacteria 8668083
158 2946047861 2946045630 Bacteria 8527308
159 2946069842 2946064051 Bacteria 8957905
160 2947226957 2947224130 Bacteria 9938529
161 2990062941 2990059506 Bacteria 9321252
162 2997452862 2997451912 Bacteria 8492419
163 2997602827 2997600082 Bacteria 9896405
164 3006393798 3006393351 Bacteria 6615579
165 3006500119 3006493962 Bacteria 8825450
166 8008491529 8008485437 Bacteria 7198341
167 8008562785 8008558824 Bacteria 10610750
168 8023627191 8023623736 Bacteria 8593882
169 8025524585 8025524527 Bacteria 7197316
170 8047895354 8047893842 Bacteria 11723082
171 8047896106 8047893842 Bacteria 11723082
172 8048130642 8048127548 Bacteria 11053136
173 8048132268 8048127548 Bacteria 11053136
174 8048362828 8048356638 Bacteria 11044339
175 8048363600 8048356638 Bacteria 11044339
176 8048372380 8048369669 Bacteria 11666822
177 8048373132 8048369669 Bacteria 11666822
178 8048381314 8048379754 Bacteria 11877923
179 8048382065 8048379754 Bacteria 11877923
180 8048411927 8048406513 Bacteria 8936924
181 8054163308 8054160619 Bacteria 7783213
182 8055072306 8055066027 Bacteria 9479577
183 8056210559 8056207758 Bacteria 8639239
184 8056668263 8056667051 Bacteria 6953971
185 8056832199 8056829672 Bacteria 9045328
186 JGI24738J21930_10018358
187 JGI25160J50197_1020505
188 JGI25160J50197_1028965
189 JGI25160J50197_1030933
190 Ga0070685_10061261
191 Ga0068853_100013915
192 Ga0068857_101176342
193 Ga0068854_100342648
194 Ga0070715_10178942
195 Ga0105246_10080649
196 Ga0157369_10231482
197 Ga0157374_10986544
198 Ga0157372_10048975
199 Ga0207426_1001450
200 Ga0207426_1004324
201 Ga0207685_10137850
202 Ga0207639_10009943
203 Ga0207702_10151962
204 Ga0307515_10067590
205 Ga0307512_10010457
206 Ga0307512_10033007
207 Ga0307509_10020972
208 Ga0307408_100437371
209 Ga0307410_10553988
210 Ga0307416_100037301
211 Ga0395899_0533032
212 Ga0395900_0126055
213 Ga0395898_0005304
214 Ga0395898_0070135
215 Ga0395901_0217829
216 Ga0439436_0005320
217 Ga0439439_0005033
218 Ga0451853_3911094
219 Ga0439433_0039450
220 Ga0439449_0183387
221 Ga0439457_003797
222 Ga0450894_000022
223 Ga0450895_001516
224 Ga0450896_001574
225 Ga0450898_001140
226 Ga0450899_000053
227 Ga0450903_000215
228 Ga0466972_0031300
229 Ga0466965_0048374
230 Ga0466965_0250464
231 Ga0466961_0096620
232 Ga0466957_0119135
233 Ga0466960_0150102
234 Ga0466958_0298467
235 Ga0466967_0171188
236 Ga0495603_0209325
237 Ga0495629_0166419
238 Ga0495580_0230920
239 Ga0495662_0170622
240 Ga0495664_0065942
241 Ga0495585_0184989
242 Ga0495583_0035282
243 Ga0495618_0043094
244 Ga0495628_0197178
245 Ga0495666_0041453
246 Ga0495640_0349051
247 Ga0495645_0082944
248 Ga0495634_0029526
249 Ga0495611_0053710
250 Ga0495625_0207811
251 Ga0495657_0161232
252 Ga0495646_0158374
253 Ga0495613_0048579
254 Ga0495624_0011090
255 Ga0495589_0038085
256 Ga0495600_0123058
257 Ga0495660_0141352
258 Ga0495581_0066852
259 Ga0495676_0053908
260 Ga0495687_024244
261 Ga0495675_0006189
262 Ga0495681_0003919
263 Ga0495686_0006808
264 Ga0495593_0093582
265 Ga0495614_0014383
266 Ga0501031_0176359
267 Ga0501032_0037569
268 Ga0501032_0079941
269 Ga0501032_0239472
270 Ga0501033_0032719
271 Ga0501033_0051828
272 Ga0501033_0122649
273 Ga0501033_0156440
274 Ga0501034_0009935
275 Ga0501034_0021474
276 Ga0501034_0043601
277 Ga0501034_0109263
278 Ga0501036_0000553
279 Ga0501036_0299339
280 Ga0501037_0020764
281 Ga0501037_0024590
282 Ga0501038_0002207
283 Ga0501039_0013796
284 Ga0501042_0523690
285 Ga0501043_0167629
286 Ga0501043_0297587
287 Ga0501046_0010583
288 Ga0501046_0129133
289 Ga0501047_0009530
290 Ga0501047_0015497
291 Ga0501047_0017015
292 Ga0501047_0179887
293 Ga0501047_0647799
294 Ga0501048_0065058
295 Ga0501070_0000903
296 Ga0501074_0007022
297 Ga0501080_0071615
298 Ga0501080_0499345
299 Ga0501035_0004257
300 Ga0501035_0027770
301 Ga0501035_0036364
302 Ga0501044_0009230
303 Ga0501044_0405330
304 Ga0501044_0455463
305 Ga0500641_0029680
306 2990046182
307 2547408394
308 2585309053
309 2616697295
310 2616903239
311 2643902262
312 2643943908
313 2644386895
314 2644403832
315 2644434645
316 2768643008
317 2784590411
318 2785341204
319 2785371499
320 2793976886
321 2793985481
322 2808913622
323 2809234084
324 2812355945
325 2812478755
326 2819694631
327 2862186410
328 2862284749
329 2862291060
330 2862390425
331 2862707907
332 2866614320
333 2867349168
334 2867476805
335 2873154056
336 2884698940
337 2891397771
338 2891554441
339 2895429898
340 2895449192
341 2912730169
342 2918506504
343 2946047861
344 2946069842
345 2947226957
346 2990062941
347 2997452862
348 2997602827
349 3006393798
350 3006500119
351 8008491529
352 8008562785
353 8023627191
354 8025524585
355 8047895354
356 8047896106
357 8048130642
358 8048132268
359 8048362828
360 8048363600
361 8048372380
362 8048373132
363 8048381314
364 8048382065
365 8048411927
366 8054163308
367 8055072306
368 8056210559
369 8056668263
370 8056832199

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

29

74

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dg7-assembly1.cif.gz_A crystal structure of the putative transcriptional regulator sco0337 from streptomyces coelicolor a3(2) 0.7049 8 198
5efy-assembly1.cif.gz_B apo-form of sco3201 0.6978 9 194
2dg7-assembly1.cif.gz_A crystal structure of the putative transcriptional regulator sco0337 from streptomyces coelicolor a3(2) 0.692 8 198
4cgr-assembly1.cif.gz_B structure of regulator protein sco3201 from streptomyces coelicolor 0.6886 7 194
2rae-assembly1.cif.gz_A-2 crystal structure of a tetr/acrr family transcriptional regulator from rhodococcus sp. rha1 0.6856 13 202
ID Description Score Start End Superfamily
3mvpB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9809 12 53 1.10.10.60
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9446 13 60 1.10.10.60
3bqzA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9413 13 60 1.10.10.60
2gbyE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.94 13 60 1.10.10.60
1jtxE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9387 13 60 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A1C6QXP4-F1-model_v4 Transcriptional regulator, TetR family 0.9803 5 213 GO:0000976
GO:0003700
AF-A0A0F7VW23-F1-model_v4 TetR Family Transcriptional Regulator 0.9779 1 212 GO:0000976
GO:0003700
AF-A0A5C4VEX2-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9775 4 211 GO:0000976
GO:0003700
AF-A0A0F7VW23-F1-model_v4 TetR Family Transcriptional Regulator 0.9733 1 212 GO:0000976
GO:0003700
AF-A0A229TQI9-F1-model_v4 TetR family transcriptional regulator 0.9683 1 209 GO:0000976
GO:0003700

Map