F284906

General Info

Members Datasets Scaffolds Average Seq Length
185 132 179 520

Family's Representative Sequence

Representative Sequence 3300046538|Ga0495609_0017328|Ga0495609_0017328_452_2176
Length 574
Sequence MGFTTKFLALIIIFLFCIIFICFEMFCSVTSISETEVEHLNFTNMMSNERNKIIEGLADSNTVWDVIIVGGGATGLGTALDAASRGYKTLLLEQIDFAKGTSSRSTKLAHGGVRYLAQGDIGLVVEALHERGLMLKNAAHLVKNESFIIPNYEWWGGIFYTIGLTLYDLLAGKWGFGRAKYISKKEVARRLPTIQQKGLYGGVVYHDGQFDDSRLAVNIAQTSLEQGATVLNYFKVTNLVKDAQGRVAGVVTTDTETGTSYTVKGKTVINATGVFADEILQMDKPGNRAMLRPSQGIHLVVDMSFMPAEDALMIPKTSDGRVLFAVPWHDKLVIGTTDTPLTQHSLEPLALDEEIEFIMRTADQYLVKAPARKDVLSMFAGLRPLAAPQGGSEKTKEISRSHKIFVSDSGLITITGGKWTTYRKMAEDTVNKAIEVGKLVKRPVKTKDLPIHGSTPIVDRNNHLYVYGSDRDAVLALVNENKAWGEKLHPRAEYIAAEVVWAVRHEMARTLEDVLARRVRILFLDARMAIDVAPKVAALIAAELKKDAQWEKEQTDTFIALAKTYLLEPYPLPA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2738541283 Pedobacter sp. OK701 Isolate Unclassified
3 2738541284 Pedobacter sp. YR016 Isolate Unclassified
4 2833640130 Mariniflexile sp. TRM1-10 Isolate Rhizosphere
5 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
6 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
7 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
8 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
34 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
66 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
67 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
68 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
95 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
96 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
97 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
98 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
99 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
103 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
104 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
105 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
110 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
111 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
115 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
116 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
117 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
118 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
119 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
120 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
121 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
125 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
126 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
127 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
130 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
131 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
132 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.76
Metatranscriptomes 0
Isolates 3.24

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.32
Nodule 0
Rhizoplane 0.54
Rhizosphere 87.57
Stem 0
Stem Tuber 0
Unclassified 7.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3584547 2162886007 Bacteria 2516
2 SwRhRL2b_contig_639718 2162886007 Bacteria 1883
3 JGI24744J21845_10002004 3300002077 Bacteria 4118
4 JGI25162J39368_1000022 3300002737 Bacteria 239510
5 rootH2_10000823 3300003320 Bacteria 101452
6 rootH1_10151545 3300003323 Bacteria 4960
7 Ga0065714_10064583 3300005288 Bacteria 32320
8 Ga0065704_10074395 3300005289 Bacteria 6304
9 Ga0065704_10086599 3300005289 Bacteria 3102
10 Ga0065712_10005399 3300005290 Bacteria 4184
11 Ga0070670_100047023 3300005331 Bacteria 3712
12 Ga0068869_100153756 3300005334 Bacteria 1786
13 Ga0070689_100007087 3300005340 Bacteria 7807
14 Ga0070668_100054060 3300005347 Bacteria 3097
15 Ga0070669_100002930 3300005353 Bacteria 12298
16 Ga0070673_100002153 3300005364 Bacteria 11938
17 Ga0070673_100016899 3300005364 Bacteria 5174
18 Ga0070688_100019589 3300005365 Bacteria 3922
19 Ga0070714_100194138 3300005435 Bacteria 1854
20 Ga0068867_100153905 3300005459 Bacteria 1808
21 Ga0068853_100004534 3300005539 Bacteria 10778
22 Ga0070665_100000012 3300005548 Bacteria 508937
23 Ga0068855_100000026 3300005563 Bacteria 175140
24 Ga0068855_100001018 3300005563 Bacteria 34919
25 Ga0068855_100077304 3300005563 Bacteria 3862
26 Ga0068857_100055963 3300005577 Bacteria 3500
27 Ga0068854_100067518 3300005578 Bacteria 2605
28 Ga0068856_100000015 3300005614 Bacteria 157353
29 Ga0068856_100008226 3300005614 Bacteria 10167
30 Ga0068852_100023605 3300005616 Bacteria 4953
31 Ga0068859_100034367 3300005617 Bacteria 5088
32 Ga0068859_100085036 3300005617 Bacteria 3208
33 Ga0068864_100074883 3300005618 Bacteria 2954
34 Ga0068861_100007928 3300005719 Bacteria 7306
35 Ga0068870_10005653 3300005840 Bacteria 5469
36 Ga0068863_100096139 3300005841 Bacteria 2812
37 Ga0068858_100003012 3300005842 Bacteria 16898
38 Ga0068860_100150499 3300005843 Bacteria 2241
39 Ga0068862_100009176 3300005844 Bacteria 8193
40 Ga0075366_10012315 3300006195 Bacteria 4849
41 Ga0068871_100000569 3300006358 Bacteria 25274
42 Ga0075429_100054603 3300006880 Unclassified 3475
43 Ga0068865_100000098 3300006881 Bacteria 45185
44 Ga0097620_100034369 3300006931 Bacteria 5088
45 Ga0097620_100085038 3300006931 Bacteria 3208
46 Ga0105240_10002523 3300009093 Bacteria 29393
47 Ga0105240_10004044 3300009093 Bacteria 22562
48 Ga0105240_10017980 3300009093 Bacteria 9510
49 Ga0105240_10063603 3300009093 Bacteria 4589
50 Ga0111539_10028248 3300009094 Bacteria 6847
51 Ga0105243_10000004 3300009148 Bacteria 601266
52 Ga0105248_10035734 3300009177 Bacteria 5558
53 Ga0105237_10000088 3300009545 Bacteria 124518
54 Ga0105237_10000354 3300009545 Bacteria 64712
55 Ga0105237_10001433 3300009545 Bacteria 31542
56 Ga0105237_10044448 3300009545 Bacteria 4472
57 Ga0105237_10092995 3300009545 Bacteria 3005
58 Ga0105238_10001410 3300009551 Bacteria 24084
59 Ga0105238_10187042 3300009551 Bacteria 2047
60 Ga0105249_10060162 3300009553 Unclassified 3484
61 Ga0105239_10000042 3300010375 Bacteria 199662
62 Ga0105239_10000094 3300010375 Bacteria 124925
63 Ga0105239_10061710 3300010375 Bacteria 4114
64 Ga0105239_10124286 3300010375 Bacteria 2867
65 Ga0157373_10005541 3300013100 Bacteria 9465
66 Ga0157373_10089863 3300013100 Bacteria 2163
67 Ga0157371_10003209 3300013102 Bacteria 15016
68 Ga0157370_10002986 3300013104 Bacteria 20118
69 Ga0157370_10004909 3300013104 Bacteria 15153
70 Ga0157370_10007577 3300013104 Bacteria 11787
71 Ga0157370_10013318 3300013104 Bacteria 8471
72 Ga0157369_10011004 3300013105 Bacteria 10298
73 Ga0157369_10011572 3300013105 Bacteria 10016
74 Ga0157369_10015370 3300013105 Bacteria 8632
75 Ga0157378_10069248 3300013297 Bacteria 3165
76 Ga0163162_10000013 3300013306 Bacteria 275366
77 Ga0163162_10002445 3300013306 Bacteria 17518
78 Ga0163162_10047898 3300013306 Bacteria 4283
79 Ga0157372_10004590 3300013307 Bacteria 14688
80 Ga0157372_10022709 3300013307 Bacteria 6790
81 Ga0157372_10023887 3300013307 Bacteria 6632
82 Ga0157372_10109036 3300013307 Unclassified 3170
83 Ga0157375_10002218 3300013308 Bacteria 16810
84 Ga0157375_10027746 3300013308 Bacteria 5297
85 Ga0157375_10063672 3300013308 Bacteria 3670
86 Ga0163163_10000598 3300014325 Bacteria 31471
87 Ga0157380_10005319 3300014326 Bacteria 8996
88 Ga0182008_10000002 3300014497 Bacteria 480216
89 Ga0182008_10000053 3300014497 Bacteria 102934
90 Ga0157377_10002189 3300014745 Bacteria 8597
91 Ga0157379_10017042 3300014968 Bacteria 6396
92 Ga0157379_10131542 3300014968 Bacteria 2253
93 Ga0157376_10006996 3300014969 Bacteria 8002
94 Ga0157376_10075552 3300014969 Bacteria 2876
95 Ga0182006_1041328 3300015261 Bacteria 1810
96 Ga0163161_10010076 3300017792 Bacteria 6542
97 Ga0163161_10026158 3300017792 Bacteria 4134
98 Ga0163161_10036765 3300017792 Bacteria 3507
99 Ga0209437_100024 3300025233 Bacteria 592878
100 Ga0209455_1001713 3300025272 Bacteria 9390
101 Ga0207645_10059789 3300025907 Bacteria 2434
102 Ga0207643_10018158 3300025908 Bacteria 3853
103 Ga0207695_10004466 3300025913 Bacteria 19054
104 Ga0207695_10007478 3300025913 Bacteria 13876
105 Ga0207695_10116504 3300025913 Bacteria 2645
106 Ga0207671_10002636 3300025914 Bacteria 18871
107 Ga0207671_10005983 3300025914 Bacteria 11005
108 Ga0207671_10044097 3300025914 Bacteria 3298
109 Ga0207657_10097760 3300025919 Bacteria 2441
110 Ga0207681_10054864 3300025923 Bacteria 2711
111 Ga0207659_10039214 3300025926 Bacteria 3302
112 Ga0207644_10023666 3300025931 Bacteria 4210
113 Ga0207706_10022379 3300025933 Bacteria 5673
114 Ga0207709_10000010 3300025935 Bacteria 601305
115 Ga0207670_10004471 3300025936 Bacteria 7531
116 Ga0207704_10000334 3300025938 Bacteria 21818
117 Ga0207691_10000285 3300025940 Bacteria 49947
118 Ga0207667_10000022 3300025949 Bacteria 369570
119 Ga0207667_10135826 3300025949 Bacteria 2533
120 Ga0207712_10016671 3300025961 Bacteria 4761
121 Ga0207703_10123383 3300026035 Bacteria 2227
122 Ga0207639_10003841 3300026041 Bacteria 10123
123 Ga0207702_10035669 3300026078 Bacteria 4158
124 Ga0207648_10008540 3300026089 Bacteria 9910
125 Ga0207648_10027786 3300026089 Bacteria 5019
126 Ga0207674_10005257 3300026116 Bacteria 15410
127 Ga0207674_10214756 3300026116 Bacteria 1872
128 Ga0207675_100000085 3300026118 Bacteria 73716
129 Ga0207698_10012636 3300026142 Bacteria 5533
130 Ga0268266_10000080 3300028379 Bacteria 210179
131 Ga0268265_10085312 3300028380 Bacteria 2506
132 Ga0268264_10066623 3300028381 Bacteria 3037
133 Ga0307517_10019437 3300028786 Bacteria 8716
134 Ga0307515_10000010 3300028794 Bacteria 651586
135 Ga0307515_10000820 3300028794 Bacteria 71586
136 Ga0307515_10003704 3300028794 Bacteria 32078
137 Ga0265339_10000079 3300031249 Bacteria 83641
138 Ga0265327_10000099 3300031251 Bacteria 190474
139 Ga0307509_10148186 3300031507 Bacteria 2268
140 Ga0265314_10001365 3300031711 Bacteria 27500
141 Ga0307409_100034956 3300031995 Unclassified 3678
142 Ga0307416_100000927 3300032002 Bacteria 15505
143 Ga0307415_100009665 3300032126 Bacteria 5423
144 Ga0307507_10000034 3300033179 Bacteria 188697
145 Ga0307510_10000218 3300033180 Bacteria 51022
146 Ga0373941_0006551 3300035115 Bacteria 2811
147 Ga0395899_0010962 3300037312 Bacteria 6944
148 Ga0395899_0013441 3300037312 Bacteria 6262
149 Ga0395900_0000507 3300037418 Bacteria 54887
150 Ga0395900_0063821 3300037418 Bacteria 3786
151 Ga0395900_0171105 3300037418 Bacteria 2211
152 Ga0395898_0122347 3300037466 Bacteria 2493
153 Ga0395898_0174294 3300037466 Bacteria 2056
154 Ga0395905_0001895 3300037471 Bacteria 24123
155 Ga0395901_0006474 3300038443 Bacteria 11860
156 Ga0400483_171674 3300039062 Bacteria 31831
157 Ga0451576_0208966 3300045051 Bacteria 2038
158 Ga0466967_0054003 3300045976 Bacteria 3534
159 Ga0495585_0000400 3300046492 Bacteria 41942
160 Ga0495616_0024678 3300046513 Bacteria 3222
161 Ga0495648_0009747 3300046524 Bacteria 7398
162 Ga0495654_0028908 3300046530 Bacteria 2831
163 Ga0495609_0017328 3300046538 Bacteria 3344
164 Ga0495633_0000067 3300046558 Bacteria 139122
165 Ga0495625_0000375 3300046660 Bacteria 68361
166 Ga0495625_0000735 3300046660 Bacteria 45909
167 Ga0495625_0032230 3300046660 Bacteria 3890
168 Ga0495625_0094580 3300046660 Bacteria 2061
169 Ga0495670_0084469 3300046691 Bacteria 1620
170 Ga0495686_0000098 3300047472 Bacteria 183131
171 Ga0496101_0013240 3300048904 Bacteria 5524
172 Ga0496122_0008296 3300048925 Bacteria 11261
173 Ga0496123_0008004 3300048926 Bacteria 9792
174 Ga0501241_000252 3300049758 Bacteria 11959
175 nmdc:mga0k408_858_c1 3300050493 Bacteria 16731
176 nmdc:mga08y16_126254_c1 3300050511 Unclassified 2661
177 Ga0500608_007890 3300053122 Bacteria 4433
178 Ga0500618_000026 3300053125 Bacteria 148672
179 Ga0500624_000467 3300053157 Bacteria 12039

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046691 Ga0495670_0084469 Ga0495670_0084469_12_1316 433
2 3300050511 nmdc:mga08y16_126254_c1 nmdc:mga08y16_126254_c1_25_1365 444
3 3300037312 Ga0395899_0013441 Ga0395899_0013441_3034_4470 477
4 3300037418 Ga0395900_0171105 Ga0395900_0171105_762_2198 477
5 3300037466 Ga0395898_0122347 Ga0395898_0122347_1044_2480 477
6 3300005290 Ga0065712_10005399 Ga0065712_100053993 482
7 3300005331 Ga0070670_100047023 Ga0070670_1000470232 482
8 3300005334 Ga0068869_100153756 Ga0068869_1001537561 482
9 3300005353 Ga0070669_100002930 Ga0070669_1000029302 482
10 3300005364 Ga0070673_100016899 Ga0070673_1000168992 482
11 3300005459 Ga0068867_100153905 Ga0068867_1001539052 482
12 3300005578 Ga0068854_100067518 Ga0068854_1000675183 482
13 3300005617 Ga0068859_100085036 Ga0068859_1000850362 482
14 3300005719 Ga0068861_100007928 Ga0068861_1000079283 482
15 3300005840 Ga0068870_10005653 Ga0068870_100056537 482
16 3300005844 Ga0068862_100009176 Ga0068862_1000091766 482
17 3300006931 Ga0097620_100085038 Ga0097620_1000850383 482
18 3300009553 Ga0105249_10060162 Ga0105249_100601624 482
19 3300013308 Ga0157375_10027746 Ga0157375_100277464 482
20 3300014326 Ga0157380_10005319 Ga0157380_100053199 482
21 3300014745 Ga0157377_10002189 Ga0157377_100021897 482
22 3300025907 Ga0207645_10059789 Ga0207645_100597892 482
23 3300025908 Ga0207643_10018158 Ga0207643_100181582 482
24 3300025923 Ga0207681_10054864 Ga0207681_100548642 482
25 3300025926 Ga0207659_10039214 Ga0207659_100392143 482
26 3300026089 Ga0207648_10027786 Ga0207648_100277866 482
27 3300026116 Ga0207674_10005257 Ga0207674_1000525718 482
28 3300026118 Ga0207675_100000085 Ga0207675_10000008534 482
29 3300031251 Ga0265327_10000099 Ga0265327_10000099116 500
30 3300005435 Ga0070714_100194138 Ga0070714_1001941382 506
31 3300013307 Ga0157372_10023887 Ga0157372_100238877 506
32 3300037466 Ga0395898_0174294 Ga0395898_0174294_234_1778 506
33 3300005614 Ga0068856_100008226 Ga0068856_1000082262 509
34 3300037312 Ga0395899_0010962 Ga0395899_0010962_655_2226 509
35 3300037418 Ga0395900_0063821 Ga0395900_0063821_1835_3406 509
36 3300037471 Ga0395905_0001895 Ga0395905_0001895_12077_13648 509
37 3300038443 Ga0395901_0006474 Ga0395901_0006474_4944_6515 509
38 3300037418 Ga0395900_0000507 Ga0395900_0000507_3832_5406 511
39 iso_pu_bacteria 2833640130 2833643230 511
40 3300025961 Ga0207712_10016671 Ga0207712_100166712 512
41 3300006880 Ga0075429_100054603 Ga0075429_1000546032 513
42 3300009094 Ga0111539_10028248 Ga0111539_100282482 513
43 3300045976 Ga0466967_0054003 Ga0466967_0054003_1474_3018 513
44 3300005841 Ga0068863_100096139 Ga0068863_1000961393 514
45 3300046660 Ga0495625_0000735 Ga0495625_0000735_33305_34855 515
46 3300050493 nmdc:mga0k408_858_c1 nmdc:mga0k408_858_c1_13219_14784 515
47 iso_pu_bacteria 2738541284 2738762050 515
48 iso_pu_bacteria 2910245624 2910250657 515
49 3300013104 Ga0157370_10007577 Ga0157370_100075774 516
50 3300013105 Ga0157369_10011004 Ga0157369_100110043 516
51 3300006358 Ga0068871_100000569 Ga0068871_10000056927 517
52 3300009177 Ga0105248_10035734 Ga0105248_100357341 517
53 3300013297 Ga0157378_10069248 Ga0157378_100692483 517
54 3300013306 Ga0163162_10002445 Ga0163162_100024452 517
55 3300013306 Ga0163162_10047898 Ga0163162_100478985 517
56 3300013308 Ga0157375_10002218 Ga0157375_1000221815 517
57 3300014325 Ga0163163_10000598 Ga0163163_1000059823 517
58 3300014968 Ga0157379_10017042 Ga0157379_100170423 517
59 3300014969 Ga0157376_10006996 Ga0157376_100069962 517
60 3300017792 Ga0163161_10010076 Ga0163161_100100766 517
61 3300025931 Ga0207644_10023666 Ga0207644_100236663 517
62 3300048904 Ga0496101_0013240 Ga0496101_0013240_2922_4493 517
63 3300005340 Ga0070689_100007087 Ga0070689_1000070874 518
64 3300005347 Ga0070668_100054060 Ga0070668_1000540601 518
65 3300005365 Ga0070688_100019589 Ga0070688_1000195892 518
66 3300005577 Ga0068857_100055963 Ga0068857_1000559633 518
67 3300005843 Ga0068860_100150499 Ga0068860_1001504992 518
68 3300009551 Ga0105238_10187042 Ga0105238_101870421 518
69 3300025936 Ga0207670_10004471 Ga0207670_100044714 518
70 3300026035 Ga0207703_10123383 Ga0207703_101233832 518
71 3300026116 Ga0207674_10214756 Ga0207674_102147562 518
72 3300028380 Ga0268265_10085312 Ga0268265_100853122 518
73 3300028381 Ga0268264_10066623 Ga0268264_100666234 518
74 3300028794 Ga0307515_10000010 Ga0307515_10000010485 518
75 3300031249 Ga0265339_10000079 Ga0265339_1000007915 518
76 3300031711 Ga0265314_10001365 Ga0265314_1000136513 518
77 iso_pu_bacteria 2738541283 2738756010 518
78 3300005617 Ga0068859_100034367 Ga0068859_1000343674 519
79 3300005618 Ga0068864_100074883 Ga0068864_1000748832 519
80 3300005842 Ga0068858_100003012 Ga0068858_1000030122 519
81 3300006931 Ga0097620_100034369 Ga0097620_1000343694 519
82 3300013307 Ga0157372_10109036 Ga0157372_101090363 519
83 3300014968 Ga0157379_10131542 Ga0157379_101315421 519
84 3300025933 Ga0207706_10022379 Ga0207706_100223792 519
85 3300025940 Ga0207691_10000285 Ga0207691_1000028539 519
86 3300026089 Ga0207648_10008540 Ga0207648_100085408 519
87 3300045051 Ga0451576_0208966 Ga0451576_0208966_103_1665 519
88 iso_pu_bacteria 2919437846 2919441743 519
89 3300005288 Ga0065714_10064583 Ga0065714_1006458312 520
90 3300049758 Ga0501241_000252 Ga0501241_000252_4607_6223 520
91 iso_pu_bacteria 8055588893 8055589331 520
92 3300005614 Ga0068856_100000015 Ga0068856_10000001543 521
93 3300013104 Ga0157370_10013318 Ga0157370_100133185 521
94 3300013105 Ga0157369_10011572 Ga0157369_100115724 521
95 3300013307 Ga0157372_10004590 Ga0157372_100045904 521
96 3300014497 Ga0182008_10000002 Ga0182008_10000002388 521
97 3300014969 Ga0157376_10075552 Ga0157376_100755522 521
98 3300026078 Ga0207702_10035669 Ga0207702_100356693 521
99 3300005563 Ga0068855_100000026 Ga0068855_100000026132 522
100 3300005563 Ga0068855_100001018 Ga0068855_1000010187 522
101 3300009093 Ga0105240_10002523 Ga0105240_100025234 522
102 3300009545 Ga0105237_10000088 Ga0105237_100000881 522
103 3300009545 Ga0105237_10000354 Ga0105237_1000035418 522
104 3300009551 Ga0105238_10001410 Ga0105238_1000141013 522
105 3300010375 Ga0105239_10000042 Ga0105239_100000429 522
106 3300013102 Ga0157371_10003209 Ga0157371_100032092 522
107 3300013104 Ga0157370_10002986 Ga0157370_100029865 522
108 3300013104 Ga0157370_10004909 Ga0157370_100049098 522
109 3300013105 Ga0157369_10015370 Ga0157369_100153701 522
110 3300014497 Ga0182008_10000053 Ga0182008_1000005318 522
111 3300015261 Ga0182006_1041328 Ga0182006_10413281 522
112 3300017792 Ga0163161_10036765 Ga0163161_100367652 522
113 3300025272 Ga0209455_1001713 Ga0209455_10017134 522
114 3300025914 Ga0207671_10002636 Ga0207671_100026362 522
115 3300025919 Ga0207657_10097760 Ga0207657_100977602 522
116 3300025949 Ga0207667_10000022 Ga0207667_1000002243 522
117 3300025949 Ga0207667_10135826 Ga0207667_101358262 522
118 3300031507 Ga0307509_10148186 Ga0307509_101481861 522
119 3300035115 Ga0373941_0006551 Ga0373941_0006551_971_2542 522
120 3300039062 Ga0400483_171674 Ga0400483_171674_18631_20199 522
121 3300048925 Ga0496122_0008296 Ga0496122_0008296_3745_5328 522
122 3300048926 Ga0496123_0008004 Ga0496123_0008004_4166_5749 522
123 3300002077 JGI24744J21845_10002004 JGI24744J21845_100020043 523
124 3300002737 JGI25162J39368_1000022 JGI25162J39368_100002226 523
125 3300003320 rootH2_10000823 rootH2_1000082330 523
126 3300003323 rootH1_10151545 rootH1_101515454 523
127 3300005364 Ga0070673_100002153 Ga0070673_10000215310 523
128 3300005539 Ga0068853_100004534 Ga0068853_1000045347 523
129 3300005548 Ga0070665_100000012 Ga0070665_100000012130 523
130 3300005563 Ga0068855_100077304 Ga0068855_1000773044 523
131 3300005616 Ga0068852_100023605 Ga0068852_1000236053 523
132 3300006195 Ga0075366_10012315 Ga0075366_100123153 523
133 3300006881 Ga0068865_100000098 Ga0068865_1000000984 523
134 3300009093 Ga0105240_10004044 Ga0105240_1000404420 523
135 3300009093 Ga0105240_10017980 Ga0105240_100179802 523
136 3300009093 Ga0105240_10063603 Ga0105240_100636034 523
137 3300009545 Ga0105237_10001433 Ga0105237_1000143326 523
138 3300009545 Ga0105237_10044448 Ga0105237_100444484 523
139 3300009545 Ga0105237_10092995 Ga0105237_100929952 523
140 3300010375 Ga0105239_10000094 Ga0105239_1000009427 523
141 3300010375 Ga0105239_10061710 Ga0105239_100617102 523
142 3300010375 Ga0105239_10124286 Ga0105239_101242862 523
143 3300013100 Ga0157373_10005541 Ga0157373_100055414 523
144 3300013100 Ga0157373_10089863 Ga0157373_100898632 523
145 3300013306 Ga0163162_10000013 Ga0163162_10000013103 523
146 3300013307 Ga0157372_10022709 Ga0157372_100227093 523
147 3300013308 Ga0157375_10063672 Ga0157375_100636722 523
148 3300017792 Ga0163161_10026158 Ga0163161_100261582 523
149 3300025233 Ga0209437_100024 Ga0209437_100024340 523
150 3300025913 Ga0207695_10004466 Ga0207695_100044662 523
151 3300025913 Ga0207695_10007478 Ga0207695_100074784 523
152 3300025913 Ga0207695_10116504 Ga0207695_101165041 523
153 3300025914 Ga0207671_10005983 Ga0207671_100059832 523
154 3300025914 Ga0207671_10044097 Ga0207671_100440972 523
155 3300025938 Ga0207704_10000334 Ga0207704_100003342 523
156 3300026041 Ga0207639_10003841 Ga0207639_100038412 523
157 3300026142 Ga0207698_10012636 Ga0207698_100126363 523
158 3300028379 Ga0268266_10000080 Ga0268266_10000080123 523
159 3300028786 Ga0307517_10019437 Ga0307517_100194373 523
160 3300028794 Ga0307515_10000820 Ga0307515_1000082012 523
161 3300028794 Ga0307515_10003704 Ga0307515_100037042 523
162 3300033179 Ga0307507_10000034 Ga0307507_100000343 523
163 3300033180 Ga0307510_10000218 Ga0307510_1000021817 523
164 3300046492 Ga0495585_0000400 Ga0495585_0000400_15447_17072 523
165 3300046513 Ga0495616_0024678 Ga0495616_0024678_436_2025 523
166 3300046524 Ga0495648_0009747 Ga0495648_0009747_1792_3417 523
167 3300046530 Ga0495654_0028908 Ga0495654_0028908_608_2233 523
168 3300046538 Ga0495609_0017328 Ga0495609_0017328_452_2176 523
169 3300046558 Ga0495633_0000067 Ga0495633_0000067_123939_125531 523
170 3300046660 Ga0495625_0000375 Ga0495625_0000375_2983_4608 523
171 3300046660 Ga0495625_0032230 Ga0495625_0032230_966_2567 523
172 3300046660 Ga0495625_0094580 Ga0495625_0094580_359_1948 523
173 3300047472 Ga0495686_0000098 Ga0495686_0000098_163619_165283 523
174 3300053122 Ga0500608_007890 Ga0500608_007890_382_1959 523
175 3300053125 Ga0500618_000026 Ga0500618_000026_1213_2787 523
176 3300053157 Ga0500624_000467 Ga0500624_000467_7750_9342 523
177 2162886007 SwRhRL2b_contig_3584547 SwRhRL2b_0772.00007540 525
178 2162886007 SwRhRL2b_contig_639718 SwRhRL2b_0223.00005800 525
179 3300005289 Ga0065704_10074395 Ga0065704_100743952 525
180 3300005289 Ga0065704_10086599 Ga0065704_100865992 525
181 3300009148 Ga0105243_10000004 Ga0105243_1000000464 525
182 3300025935 Ga0207709_10000010 Ga0207709_1000001065 525
183 3300031995 Ga0307409_100034956 Ga0307409_1000349562 525
184 3300032002 Ga0307416_100000927 Ga0307416_1000009274 525
185 3300032126 Ga0307415_100009665 Ga0307415_1000096652 525

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00890

FAD_binding_2

FAD binding domain

65

128

0.86

PF16901

DAO_C

C-terminal domain of alpha-glycerophosphate oxidase

412

554

0.86

PF01266

DAO

FAD dependent oxidoreductase

65

423

0.77

PF12831

FAD_oxidored

FAD dependent oxidoreductase

65

274

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bkd-assembly1.cif.gz_a formate dehydrogenase - heterodisulfide reductase - formylmethanofuran dehydrogenase complex from methanospirillum hungatei (heterodislfide reductase core and mobile arm in conformational state 1, composite structure) 0.9563 22 53
5ocm-assembly1.cif.gz_A imine reductase from streptosporangium roseum in complex with nadp+ and 2,2,2-trifluoroacetophenone hydrate 0.9233 20 49
6fqz-assembly1.cif.gz_B plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor nadp+ and in complex with its substrate 6-phosphogluconate 0.9098 21 51
7wnn-assembly1.cif.gz_A crystal structure of imine reductase from actinoalloteichus hymeniacidonis in complex with nadph 0.9083 21 53
8jku-assembly1.cif.gz_A ancestral imine reductase n559 0.9083 21 49
ID Description Score Start End Superfamily
af_Q4DG35_95_220_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.9555 424 520 1.10.8.870
af_Q9DBM2_291_471_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9553 22 51 3.40.50.720
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.932 23 53 3.50.50.60
af_O97245_528_652_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.9273 418 519 1.10.8.870
af_A0A1D8PMP1_486_641_1.10.8.870 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Alpha-glycerophosphate oxidase, cap domain 0.918 424 521 1.10.8.870
ID Description Score Start End GO Terms
AF-A0A1Q4G5S3-F1-model_v4 FAD-dependent oxidoreductase 0.988 1 525 GO:0004368
GO:0046168
AF-A0A357JG47-F1-model_v4 FAD-dependent oxidoreductase 0.9865 4 523 GO:0004368
GO:0046168
AF-A0A1N6Z5X5-F1-model_v4 Glycerol-3-phosphate dehydrogenase 0.9863 7 525 GO:0004368
GO:0046168
AF-A0A3G2G6N6-F1-model_v4 Glycerol-3-phosphate dehydrogenase/oxidase 0.9862 7 525 GO:0004368
GO:0046168
AF-A0A1H8K4P8-F1-model_v4 Glycerol-3-phosphate dehydrogenase 0.9852 4 525 GO:0004368
GO:0046168

Feature Viewer

pLDDT pTM Quality
90.84 0.92 High
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Predicted Structure (AlphaFold2)

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