F283025
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 184 | 129 | 176 | 469 |
Family's Representative Sequence
| Representative Sequence | 3300044683|Ga0466965_0026163|Ga0466965_0026163_867_2357 |
| Length | 496 |
| Sequence | MGFKFVLLWTDVALYALVAALALYVWRIRHQPNARANWRKVLRDPAALCAAAVLLLFVGVAVLDSVHFRRALPPAPGTPASAPVFYNARTESLLDVVLQRQIAMREVSWSAPLAAYGFAKDTVQHGSVVLREYPRLEFGGAHLKDPAREAEGDIAARAGTGLLVGALLSVLLVAAATALLARSHGGWRNALADLARGHTEYPVRPMLVTLGVICLLGGAVGALMNHYHVFGTDRTGNDVLYQALKSVRTAFVIGTLATLATLPFAIVLGVLAGYFRGWVDEVIQYLYTTLTSVPSVLLIAACVLMMQVFLDKHPEMFETGAERSDVKIFLLCVILGLTGWATLCRLVRGETLKLRELEYVQAATAFGVSDARIMARHVLPNVMHLVLITTVLSFSDLILFEAVLTYIGVGVDPSMNSFGGMINLARSEMSRDPVVWWSFAAAFLFMVALVLSANLFADGVRDAFDPRSRAFRPRFVRRLLKPAAPAAAGGEPALTK |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2585428057 | Methylibium sp. YR605 | Isolate | Rhizosphere |
| 2 | 2643221585 | Pelomonas sp. Root662 | Isolate | Unclassified |
| 3 | 2643221639 | Pelomonas sp. Root1217 | Isolate | Unclassified |
| 4 | 2643221644 | Rhizobacter sp. Root1221 | Isolate | Unclassified |
| 5 | 2643221646 | Pelomonas sp. Root1237 | Isolate | Unclassified |
| 6 | 2643221654 | Rhizobacter sp. Root404 | Isolate | Unclassified |
| 7 | 2643221656 | Pelomonas sp. Root405 | Isolate | Unclassified |
| 8 | 2643221660 | Methylibium sp. Root1272 | Isolate | Unclassified |
| 9 | 3300002773 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS | Metagenome | Endosphere |
| 10 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 11 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 12 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 13 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 14 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 15 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 16 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 27 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 29 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 30 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 31 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 32 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 33 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 34 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 35 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 36 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 37 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 38 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 40 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 49 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 50 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 51 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 52 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 55 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 74 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 76 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 77 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 78 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 79 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 80 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 81 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 82 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 83 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 84 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 85 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 86 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 87 | 3300041459 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG | Metagenome | Rhizoplane |
| 88 | 3300041460 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG | Metagenome | Rhizoplane |
| 89 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 90 | 3300042531 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 | Metagenome | Rhizosphere |
| 91 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 92 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 93 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 94 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 95 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 96 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 97 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 98 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 99 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 100 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 101 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300047321 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 108 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 109 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 110 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 112 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 113 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 115 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 116 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 117 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 118 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 119 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 120 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 121 | 3300053129 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere | Metagenome | Endosphere |
| 122 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 123 | 3300053133 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere | Metagenome | Endosphere |
| 124 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 125 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 126 | 3300053143 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere | Metagenome | Endosphere |
| 127 | 3300053154 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere | Metagenome | Endosphere |
| 128 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 129 | 3300053724 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.65 |
| Metatranscriptomes | 0 |
| Isolates | 4.35 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 34.78 |
| Nodule | 1.09 |
| Rhizoplane | 4.35 |
| Rhizosphere | 44.57 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 15.22 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25152J39213_1004727 | 3300002773 | Bacteria | 4203 |
| 2 | Ga0055526_1001195 | 3300003771 | Bacteria | 18771 |
| 3 | Ga0055524_1000203 | 3300003775 | Bacteria | 64635 |
| 4 | Ga0055530_10000258 | 3300003791 | Bacteria | 47803 |
| 5 | Ga0055540_1000023 | 3300003792 | Bacteria | 201131 |
| 6 | Ga0055531_10000064 | 3300003794 | Bacteria | 117923 |
| 7 | Ga0065165_1005244 | 3300005262 | Bacteria | 7421 |
| 8 | Ga0070660_100021245 | 3300005339 | Bacteria | 4784 |
| 9 | Ga0070661_100012560 | 3300005344 | Bacteria | 5927 |
| 10 | Ga0070661_100122215 | 3300005344 | Bacteria | 1951 |
| 11 | Ga0070671_100155643 | 3300005355 | Bacteria | 1931 |
| 12 | Ga0070659_100004176 | 3300005366 | Bacteria | 10298 |
| 13 | Ga0070659_100121175 | 3300005366 | Bacteria | 2119 |
| 14 | Ga0070667_100000677 | 3300005367 | Bacteria | 33094 |
| 15 | Ga0070708_100127236 | 3300005445 | Bacteria | 2356 |
| 16 | Ga0070663_100052306 | 3300005455 | Bacteria | 2913 |
| 17 | Ga0070662_100016330 | 3300005457 | Bacteria | 4983 |
| 18 | Ga0070672_100045262 | 3300005543 | Bacteria | 3403 |
| 19 | Ga0070665_100018158 | 3300005548 | Bacteria | 7056 |
| 20 | Ga0068855_100074084 | 3300005563 | Bacteria | 3955 |
| 21 | Ga0070664_100148817 | 3300005564 | Bacteria | 2066 |
| 22 | Ga0068857_100026454 | 3300005577 | Bacteria | 5115 |
| 23 | Ga0068857_100029991 | 3300005577 | Bacteria | 4799 |
| 24 | Ga0068854_100027869 | 3300005578 | Bacteria | 3897 |
| 25 | Ga0068859_100209417 | 3300005617 | Bacteria | 2036 |
| 26 | Ga0068864_100038586 | 3300005618 | Bacteria | 4080 |
| 27 | Ga0068864_100073332 | 3300005618 | Bacteria | 2984 |
| 28 | Ga0068866_10042415 | 3300005718 | Bacteria | 2264 |
| 29 | Ga0068860_100255881 | 3300005843 | Bacteria | 1706 |
| 30 | Ga0075362_10019127 | 3300006177 | Bacteria | 2844 |
| 31 | Ga0075362_10039626 | 3300006177 | Bacteria | 2072 |
| 32 | Ga0075367_10014141 | 3300006178 | Bacteria | 4313 |
| 33 | Ga0075367_10022149 | 3300006178 | Bacteria | 3560 |
| 34 | Ga0075366_10001901 | 3300006195 | Bacteria | 10549 |
| 35 | Ga0075366_10005281 | 3300006195 | Bacteria | 6997 |
| 36 | Ga0075366_10035793 | 3300006195 | Bacteria | 2927 |
| 37 | Ga0075366_10039343 | 3300006195 | Bacteria | 2796 |
| 38 | Ga0075366_10070922 | 3300006195 | Bacteria | 2076 |
| 39 | Ga0075370_10000599 | 3300006353 | Bacteria | 13913 |
| 40 | Ga0075370_10030191 | 3300006353 | Bacteria | 3023 |
| 41 | Ga0075370_10065166 | 3300006353 | Bacteria | 2078 |
| 42 | Ga0097620_100209422 | 3300006931 | Bacteria | 2036 |
| 43 | Ga0079104_1000273 | 3300006946 | Bacteria | 67267 |
| 44 | Ga0105240_10003069 | 3300009093 | Bacteria | 26236 |
| 45 | Ga0105243_10092760 | 3300009148 | Bacteria | 2490 |
| 46 | Ga0105248_10025482 | 3300009177 | Bacteria | 6576 |
| 47 | Ga0105237_10005085 | 3300009545 | Bacteria | 14946 |
| 48 | Ga0105237_10126126 | 3300009545 | Bacteria | 2554 |
| 49 | Ga0105237_10126835 | 3300009545 | Bacteria | 2546 |
| 50 | Ga0105239_10004246 | 3300010375 | Bacteria | 17204 |
| 51 | Ga0163162_10017741 | 3300013306 | Bacteria | 6964 |
| 52 | Ga0157375_10100356 | 3300013308 | Bacteria | 2975 |
| 53 | Ga0157379_10008791 | 3300014968 | Bacteria | 8811 |
| 54 | Ga0207425_1000810 | 3300025245 | Bacteria | 15694 |
| 55 | Ga0209129_1000025 | 3300025258 | Bacteria | 413639 |
| 56 | Ga0209673_1003363 | 3300025273 | Bacteria | 9526 |
| 57 | Ga0209564_1000039 | 3300025295 | Bacteria | 413604 |
| 58 | Ga0209758_1000163 | 3300025297 | Bacteria | 151988 |
| 59 | Ga0209758_1000287 | 3300025297 | Bacteria | 99234 |
| 60 | Ga0209050_1000325 | 3300025298 | Bacteria | 95686 |
| 61 | Ga0209050_1000748 | 3300025298 | Bacteria | 46763 |
| 62 | Ga0209256_1000024 | 3300025299 | Bacteria | 448909 |
| 63 | Ga0209256_1014348 | 3300025299 | Bacteria | 2857 |
| 64 | Ga0209051_1000079 | 3300025303 | Bacteria | 201183 |
| 65 | Ga0209051_1002329 | 3300025303 | Bacteria | 13794 |
| 66 | Ga0209257_1000032 | 3300025304 | Bacteria | 680354 |
| 67 | Ga0209257_1000183 | 3300025304 | Bacteria | 156618 |
| 68 | Ga0207645_10006109 | 3300025907 | Bacteria | 8657 |
| 69 | Ga0207671_10047808 | 3300025914 | Bacteria | 3166 |
| 70 | Ga0207649_10012687 | 3300025920 | Bacteria | 4683 |
| 71 | Ga0207649_10091246 | 3300025920 | Bacteria | 1995 |
| 72 | Ga0207694_10020671 | 3300025924 | Bacteria | 4984 |
| 73 | Ga0207644_10038581 | 3300025931 | Bacteria | 3366 |
| 74 | Ga0207690_10026683 | 3300025932 | Bacteria | 3640 |
| 75 | Ga0207706_10061835 | 3300025933 | Bacteria | 3298 |
| 76 | Ga0207691_10010922 | 3300025940 | Bacteria | 8718 |
| 77 | Ga0207711_10026310 | 3300025941 | Bacteria | 4881 |
| 78 | Ga0207689_10093093 | 3300025942 | Bacteria | 2476 |
| 79 | Ga0207679_10009035 | 3300025945 | Bacteria | 6367 |
| 80 | Ga0207679_10030797 | 3300025945 | Bacteria | 3750 |
| 81 | Ga0207658_10001186 | 3300025986 | Bacteria | 20793 |
| 82 | Ga0207678_10053856 | 3300026067 | Bacteria | 3466 |
| 83 | Ga0207702_10078486 | 3300026078 | Bacteria | 2859 |
| 84 | Ga0207648_10009947 | 3300026089 | Bacteria | 9061 |
| 85 | Ga0207648_10060409 | 3300026089 | Bacteria | 3306 |
| 86 | Ga0207683_10036935 | 3300026121 | Bacteria | 4254 |
| 87 | Ga0209281_1000416 | 3300027111 | Bacteria | 64290 |
| 88 | Ga0268266_10033643 | 3300028379 | Bacteria | 4357 |
| 89 | Ga0307517_10000052 | 3300028786 | Bacteria | 155904 |
| 90 | Ga0307515_10000006 | 3300028794 | Bacteria | 725810 |
| 91 | Ga0307515_10000645 | 3300028794 | Bacteria | 80548 |
| 92 | Ga0307515_10001163 | 3300028794 | Bacteria | 60305 |
| 93 | Ga0307515_10008562 | 3300028794 | Bacteria | 19918 |
| 94 | Ga0307515_10013895 | 3300028794 | Bacteria | 14988 |
| 95 | Ga0307515_10057047 | 3300028794 | Bacteria | 5660 |
| 96 | Ga0307512_10111670 | 3300030522 | Bacteria | 1798 |
| 97 | Ga0307513_10094742 | 3300031456 | Bacteria | 3029 |
| 98 | Ga0307513_10164991 | 3300031456 | Bacteria | 2101 |
| 99 | Ga0307509_10064074 | 3300031507 | Bacteria | 3868 |
| 100 | Ga0307509_10097128 | 3300031507 | Bacteria | 2995 |
| 101 | Ga0307408_100000010 | 3300031548 | Bacteria | 420048 |
| 102 | Ga0307508_10000047 | 3300031616 | Bacteria | 137805 |
| 103 | Ga0307508_10001110 | 3300031616 | Bacteria | 31159 |
| 104 | Ga0307508_10031256 | 3300031616 | Bacteria | 4813 |
| 105 | Ga0307516_10000038 | 3300031730 | Bacteria | 147103 |
| 106 | Ga0307516_10000991 | 3300031730 | Bacteria | 39211 |
| 107 | Ga0307516_10103828 | 3300031730 | Bacteria | 2655 |
| 108 | Ga0307510_10001123 | 3300033180 | Bacteria | 28660 |
| 109 | Ga0307510_10047994 | 3300033180 | Bacteria | 4562 |
| 110 | Ga0307510_10079686 | 3300033180 | Bacteria | 3191 |
| 111 | Ga0395900_0000133 | 3300037418 | Bacteria | 124692 |
| 112 | Ga0395898_0000337 | 3300037466 | Bacteria | 106044 |
| 113 | Ga0395905_0012986 | 3300037471 | Bacteria | 8004 |
| 114 | Ga0395905_0132969 | 3300037471 | Bacteria | 2340 |
| 115 | Ga0451800_1316426 | 3300041459 | Bacteria | 1878 |
| 116 | Ga0451802_0159094 | 3300041460 | Bacteria | 1923 |
| 117 | Ga0439431_0008805 | 3300041997 | Bacteria | 2272 |
| 118 | Ga0450918_000142 | 3300042531 | Bacteria | 15752 |
| 119 | Ga0451577_0004012 | 3300042876 | Bacteria | 15831 |
| 120 | Ga0466969_0000037 | 3300044656 | Bacteria | 75663 |
| 121 | Ga0466972_0007083 | 3300044658 | Bacteria | 5629 |
| 122 | Ga0466965_0026163 | 3300044683 | Bacteria | 2828 |
| 123 | Ga0466961_0010055 | 3300044693 | Bacteria | 6027 |
| 124 | Ga0466961_0012565 | 3300044693 | Bacteria | 5420 |
| 125 | Ga0466963_0008084 | 3300044694 | Bacteria | 6298 |
| 126 | Ga0466971_0016980 | 3300044719 | Bacteria | 3218 |
| 127 | Ga0466959_0022296 | 3300045049 | Bacteria | 4680 |
| 128 | Ga0466959_0075969 | 3300045049 | Bacteria | 2426 |
| 129 | Ga0451576_0002339 | 3300045051 | Bacteria | 28645 |
| 130 | Ga0451576_0022378 | 3300045051 | Bacteria | 6854 |
| 131 | Ga0466967_0271775 | 3300045976 | Bacteria | 1624 |
| 132 | Ga0495630_0074420 | 3300046517 | Bacteria | 2558 |
| 133 | Ga0495642_0025806 | 3300046528 | Bacteria | 2331 |
| 134 | Ga0495597_0023592 | 3300046542 | Bacteria | 2845 |
| 135 | Ga0495649_0006892 | 3300046694 | Bacteria | 7033 |
| 136 | Ga0495676_0017587 | 3300047321 | Bacteria | 6317 |
| 137 | Ga0495687_002586 | 3300047443 | Bacteria | 14265 |
| 138 | Ga0495687_016342 | 3300047443 | Bacteria | 3733 |
| 139 | Ga0496102_0008393 | 3300048905 | Bacteria | 8848 |
| 140 | Ga0496104_0144204 | 3300048907 | Bacteria | 2287 |
| 141 | Ga0496106_0011131 | 3300048909 | Bacteria | 6653 |
| 142 | Ga0496109_0094925 | 3300048912 | Bacteria | 2761 |
| 143 | Ga0496112_0020240 | 3300048915 | Bacteria | 6302 |
| 144 | Ga0496113_0013527 | 3300048916 | Bacteria | 5534 |
| 145 | Ga0501034_0026718 | 3300049571 | Bacteria | 5874 |
| 146 | nmdc:mga03n38_3013_c1 | 3300050490 | Bacteria | 5334 |
| 147 | nmdc:mga03n38_35202_c1 | 3300050490 | Bacteria | 2143 |
| 148 | nmdc:mga0k408_1415_c1 | 3300050493 | Bacteria | 6209 |
| 149 | nmdc:mga0k408_18910_c1 | 3300050493 | Bacteria | 3846 |
| 150 | nmdc:mga0k408_25486_c1 | 3300050493 | Bacteria | 3350 |
| 151 | nmdc:mga0k408_3173_c1 | 3300050493 | Bacteria | 8719 |
| 152 | nmdc:mga0k408_329_c1 | 3300050493 | Bacteria | 25942 |
| 153 | nmdc:mga0k408_4563_c1 | 3300050493 | Bacteria | 7354 |
| 154 | nmdc:mga0k408_4796_c1 | 3300050493 | Bacteria | 7173 |
| 155 | nmdc:mga07m45_1159_c1 | 3300050496 | Bacteria | 11836 |
| 156 | nmdc:mga07m45_1345_c1 | 3300050496 | Bacteria | 11199 |
| 157 | nmdc:mga07m45_135_c1 | 3300050496 | Bacteria | 29265 |
| 158 | nmdc:mga07m45_2612_c1 | 3300050496 | Bacteria | 8484 |
| 159 | nmdc:mga07m45_3202_c1 | 3300050496 | Bacteria | 7849 |
| 160 | nmdc:mga07m45_61093_c1 | 3300050496 | Bacteria | 2134 |
| 161 | Ga0500578_0007141 | 3300053086 | Bacteria | 7382 |
| 162 | Ga0500578_0014549 | 3300053086 | Bacteria | 5057 |
| 163 | Ga0500644_0002012 | 3300053088 | Bacteria | 5176 |
| 164 | Ga0500651_0092747 | 3300053093 | Bacteria | 1857 |
| 165 | Ga0500562_007670 | 3300053108 | Bacteria | 2721 |
| 166 | Ga0500628_000391 | 3300053129 | Bacteria | 8290 |
| 167 | Ga0500652_000226 | 3300053131 | Bacteria | 21494 |
| 168 | Ga0500655_006159 | 3300053133 | Bacteria | 2161 |
| 169 | Ga0500559_0000470 | 3300053136 | Bacteria | 28674 |
| 170 | Ga0500568_0003300 | 3300053139 | Bacteria | 9096 |
| 171 | Ga0500579_034604 | 3300053143 | Bacteria | 3221 |
| 172 | Ga0500619_013143 | 3300053154 | Bacteria | 2186 |
| 173 | Ga0500622_0000447 | 3300053156 | Bacteria | 39298 |
| 174 | Ga0500622_0001646 | 3300053156 | Bacteria | 17463 |
| 175 | Ga0500622_0001950 | 3300053156 | Bacteria | 15529 |
| 176 | Ga0500570_022716 | 3300053724 | Bacteria | 3479 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300044693 | Ga0466961_0012565 | Ga0466961_0012565_4065_5393 | 403 |
| 2 | 3300046517 | Ga0495630_0074420 | Ga0495630_0074420_38_1369 | 417 |
| 3 | 3300026089 | Ga0207648_10060409 | Ga0207648_100604092 | 427 |
| 4 | 3300053086 | Ga0500578_0007141 | Ga0500578_0007141_525_1994 | 434 |
| 5 | 3300006195 | Ga0075366_10035793 | Ga0075366_100357932 | 437 |
| 6 | 3300006946 | Ga0079104_1000273 | Ga0079104_100027312 | 437 |
| 7 | 3300027111 | Ga0209281_1000416 | Ga0209281_100041654 | 437 |
| 8 | 3300050493 | nmdc:mga0k408_329_c1 | nmdc:mga0k408_329_c1_12759_14219 | 437 |
| 9 | 3300005355 | Ga0070671_100155643 | Ga0070671_1001556432 | 438 |
| 10 | 3300005548 | Ga0070665_100018158 | Ga0070665_1000181582 | 438 |
| 11 | 3300005617 | Ga0068859_100209417 | Ga0068859_1002094172 | 438 |
| 12 | 3300005618 | Ga0068864_100073332 | Ga0068864_1000733322 | 438 |
| 13 | 3300006931 | Ga0097620_100209422 | Ga0097620_1002094222 | 438 |
| 14 | 3300028379 | Ga0268266_10033643 | Ga0268266_100336432 | 438 |
| 15 | 3300031456 | Ga0307513_10164991 | Ga0307513_101649912 | 439 |
| 16 | 3300005339 | Ga0070660_100021245 | Ga0070660_1000212453 | 440 |
| 17 | 3300005344 | Ga0070661_100012560 | Ga0070661_1000125603 | 440 |
| 18 | 3300005366 | Ga0070659_100004176 | Ga0070659_1000041766 | 440 |
| 19 | 3300005564 | Ga0070664_100148817 | Ga0070664_1001488172 | 440 |
| 20 | 3300025920 | Ga0207649_10012687 | Ga0207649_100126871 | 440 |
| 21 | 3300025932 | Ga0207690_10026683 | Ga0207690_100266832 | 440 |
| 22 | 3300025945 | Ga0207679_10009035 | Ga0207679_100090352 | 440 |
| 23 | 3300025945 | Ga0207679_10030797 | Ga0207679_100307972 | 440 |
| 24 | 3300031730 | Ga0307516_10000991 | Ga0307516_1000099116 | 440 |
| 25 | 3300050496 | nmdc:mga07m45_2612_c1 | nmdc:mga07m45_2612_c1_2328_3797 | 440 |
| 26 | 3300003775 | Ga0055524_1000203 | Ga0055524_10002033 | 441 |
| 27 | 3300009093 | Ga0105240_10003069 | Ga0105240_100030692 | 441 |
| 28 | 3300009545 | Ga0105237_10005085 | Ga0105237_100050853 | 441 |
| 29 | 3300025299 | Ga0209256_1000024 | Ga0209256_100002483 | 441 |
| 30 | 3300025924 | Ga0207694_10020671 | Ga0207694_100206713 | 441 |
| 31 | 3300041459 | Ga0451800_1316426 | Ga0451800_1316426_352_1821 | 441 |
| 32 | 3300041460 | Ga0451802_0159094 | Ga0451802_0159094_430_1899 | 441 |
| 33 | 3300050490 | nmdc:mga03n38_35202_c1 | nmdc:mga03n38_35202_c1_448_1917 | 441 |
| 34 | 3300050493 | nmdc:mga0k408_18910_c1 | nmdc:mga0k408_18910_c1_2018_3487 | 441 |
| 35 | 3300053129 | Ga0500628_000391 | Ga0500628_000391_1429_2898 | 441 |
| 36 | 3300053131 | Ga0500652_000226 | Ga0500652_000226_5403_6872 | 441 |
| 37 | 3300053133 | Ga0500655_006159 | Ga0500655_006159_591_2060 | 441 |
| 38 | 3300053143 | Ga0500579_034604 | Ga0500579_034604_168_1637 | 441 |
| 39 | 3300053156 | Ga0500622_0000447 | Ga0500622_0000447_32427_33896 | 441 |
| 40 | 3300053724 | Ga0500570_022716 | Ga0500570_022716_1517_2986 | 441 |
| 41 | 3300005262 | Ga0065165_1005244 | Ga0065165_10052445 | 442 |
| 42 | 3300025273 | Ga0209673_1003363 | Ga0209673_10033633 | 442 |
| 43 | 3300025298 | Ga0209050_1000325 | Ga0209050_100032594 | 442 |
| 44 | 3300053108 | Ga0500562_007670 | Ga0500562_007670_638_2107 | 442 |
| 45 | 3300010375 | Ga0105239_10004246 | Ga0105239_100042463 | 443 |
| 46 | 3300026078 | Ga0207702_10078486 | Ga0207702_100784862 | 443 |
| 47 | 3300031548 | Ga0307408_100000010 | Ga0307408_10000001038 | 444 |
| 48 | 3300042876 | Ga0451577_0004012 | Ga0451577_0004012_12776_14224 | 444 |
| 49 | iso_pu_bacteria | 2643221585 | 2643937121 | 446 |
| 50 | iso_pu_bacteria | 2643221639 | 2644217901 | 446 |
| 51 | iso_pu_bacteria | 2643221646 | 2644258358 | 446 |
| 52 | iso_pu_bacteria | 2643221656 | 2644318286 | 446 |
| 53 | 3300003791 | Ga0055530_10000258 | Ga0055530_100002588 | 447 |
| 54 | 3300003792 | Ga0055540_1000023 | Ga0055540_100002375 | 447 |
| 55 | 3300025298 | Ga0209050_1000748 | Ga0209050_100074830 | 447 |
| 56 | 3300025303 | Ga0209051_1000079 | Ga0209051_1000079112 | 447 |
| 57 | 3300025304 | Ga0209257_1000183 | Ga0209257_100018370 | 447 |
| 58 | 3300041997 | Ga0439431_0008805 | Ga0439431_0008805_226_1668 | 447 |
| 59 | 3300042531 | Ga0450918_000142 | Ga0450918_000142_9983_11410 | 447 |
| 60 | iso_pu_bacteria | 2643221644 | 2644247939 | 447 |
| 61 | 3300028794 | Ga0307515_10000645 | Ga0307515_1000064557 | 448 |
| 62 | 3300028794 | Ga0307515_10008562 | Ga0307515_1000856210 | 448 |
| 63 | 3300045051 | Ga0451576_0002339 | Ga0451576_0002339_21422_22870 | 448 |
| 64 | 3300045051 | Ga0451576_0022378 | Ga0451576_0022378_365_1801 | 448 |
| 65 | iso_pu_bacteria | 2643221660 | 2644337960 | 448 |
| 66 | 3300006177 | Ga0075362_10039626 | Ga0075362_100396262 | 449 |
| 67 | 3300006178 | Ga0075367_10022149 | Ga0075367_100221492 | 449 |
| 68 | 3300031730 | Ga0307516_10000038 | Ga0307516_1000003833 | 449 |
| 69 | 3300031730 | Ga0307516_10103828 | Ga0307516_101038282 | 449 |
| 70 | 3300049571 | Ga0501034_0026718 | Ga0501034_0026718_1320_2765 | 449 |
| 71 | 3300050490 | nmdc:mga03n38_3013_c1 | nmdc:mga03n38_3013_c1_350_1798 | 449 |
| 72 | 3300050493 | nmdc:mga0k408_4563_c1 | nmdc:mga0k408_4563_c1_5473_6921 | 449 |
| 73 | 3300050496 | nmdc:mga07m45_1159_c1 | nmdc:mga07m45_1159_c1_9738_11186 | 449 |
| 74 | 3300003794 | Ga0055531_10000064 | Ga0055531_1000006454 | 450 |
| 75 | 3300005618 | Ga0068864_100038586 | Ga0068864_1000385863 | 450 |
| 76 | 3300006195 | Ga0075366_10001901 | Ga0075366_100019013 | 450 |
| 77 | 3300006195 | Ga0075366_10070922 | Ga0075366_100709222 | 450 |
| 78 | 3300006353 | Ga0075370_10000599 | Ga0075370_100005993 | 450 |
| 79 | 3300006353 | Ga0075370_10030191 | Ga0075370_100301912 | 450 |
| 80 | 3300006353 | Ga0075370_10065166 | Ga0075370_100651662 | 450 |
| 81 | 3300009177 | Ga0105248_10025482 | Ga0105248_100254822 | 450 |
| 82 | 3300025303 | Ga0209051_1002329 | Ga0209051_10023294 | 450 |
| 83 | 3300025304 | Ga0209257_1000032 | Ga0209257_1000032573 | 450 |
| 84 | 3300025931 | Ga0207644_10038581 | Ga0207644_100385812 | 450 |
| 85 | 3300025941 | Ga0207711_10026310 | Ga0207711_100263105 | 450 |
| 86 | 3300028794 | Ga0307515_10000006 | Ga0307515_1000000674 | 450 |
| 87 | 3300028794 | Ga0307515_10013895 | Ga0307515_100138953 | 450 |
| 88 | 3300037471 | Ga0395905_0132969 | Ga0395905_0132969_459_1886 | 450 |
| 89 | 3300048907 | Ga0496104_0144204 | Ga0496104_0144204_609_2084 | 450 |
| 90 | 3300048912 | Ga0496109_0094925 | Ga0496109_0094925_445_1920 | 450 |
| 91 | 3300048915 | Ga0496112_0020240 | Ga0496112_0020240_65_1540 | 450 |
| 92 | 3300048916 | Ga0496113_0013527 | Ga0496113_0013527_449_1924 | 450 |
| 93 | 3300050493 | nmdc:mga0k408_3173_c1 | nmdc:mga0k408_3173_c1_2346_3794 | 450 |
| 94 | 3300050496 | nmdc:mga07m45_1345_c1 | nmdc:mga07m45_1345_c1_5094_6530 | 450 |
| 95 | 3300050496 | nmdc:mga07m45_135_c1 | nmdc:mga07m45_135_c1_18631_20079 | 450 |
| 96 | 3300050496 | nmdc:mga07m45_61093_c1 | nmdc:mga07m45_61093_c1_387_1823 | 450 |
| 97 | 3300053156 | Ga0500622_0001646 | Ga0500622_0001646_10709_12160 | 451 |
| 98 | 3300005366 | Ga0070659_100121175 | Ga0070659_1001211752 | 452 |
| 99 | 3300005563 | Ga0068855_100074084 | Ga0068855_1000740842 | 452 |
| 100 | iso_pu_bacteria | 2585428057 | 2587726746 | 452 |
| 101 | iso_pu_bacteria | 2643221654 | 2644304492 | 452 |
| 102 | 3300009148 | Ga0105243_10092760 | Ga0105243_100927602 | 453 |
| 103 | 3300031507 | Ga0307509_10097128 | Ga0307509_100971283 | 453 |
| 104 | 3300033180 | Ga0307510_10001123 | Ga0307510_100011235 | 453 |
| 105 | 3300005344 | Ga0070661_100122215 | Ga0070661_1001222152 | 454 |
| 106 | 3300005367 | Ga0070667_100000677 | Ga0070667_1000006776 | 454 |
| 107 | 3300005445 | Ga0070708_100127236 | Ga0070708_1001272362 | 454 |
| 108 | 3300005455 | Ga0070663_100052306 | Ga0070663_1000523063 | 454 |
| 109 | 3300005457 | Ga0070662_100016330 | Ga0070662_1000163303 | 454 |
| 110 | 3300005543 | Ga0070672_100045262 | Ga0070672_1000452621 | 454 |
| 111 | 3300005577 | Ga0068857_100026454 | Ga0068857_1000264543 | 454 |
| 112 | 3300005577 | Ga0068857_100029991 | Ga0068857_1000299912 | 454 |
| 113 | 3300005578 | Ga0068854_100027869 | Ga0068854_1000278692 | 454 |
| 114 | 3300005718 | Ga0068866_10042415 | Ga0068866_100424152 | 454 |
| 115 | 3300005843 | Ga0068860_100255881 | Ga0068860_1002558811 | 454 |
| 116 | 3300006177 | Ga0075362_10019127 | Ga0075362_100191272 | 454 |
| 117 | 3300006178 | Ga0075367_10014141 | Ga0075367_100141413 | 454 |
| 118 | 3300006195 | Ga0075366_10005281 | Ga0075366_100052812 | 454 |
| 119 | 3300006195 | Ga0075366_10039343 | Ga0075366_100393432 | 454 |
| 120 | 3300009545 | Ga0105237_10126126 | Ga0105237_101261262 | 454 |
| 121 | 3300009545 | Ga0105237_10126835 | Ga0105237_101268352 | 454 |
| 122 | 3300013306 | Ga0163162_10017741 | Ga0163162_100177413 | 454 |
| 123 | 3300013308 | Ga0157375_10100356 | Ga0157375_101003562 | 454 |
| 124 | 3300014968 | Ga0157379_10008791 | Ga0157379_100087912 | 454 |
| 125 | 3300025907 | Ga0207645_10006109 | Ga0207645_100061093 | 454 |
| 126 | 3300025914 | Ga0207671_10047808 | Ga0207671_100478082 | 454 |
| 127 | 3300025920 | Ga0207649_10091246 | Ga0207649_100912462 | 454 |
| 128 | 3300025933 | Ga0207706_10061835 | Ga0207706_100618353 | 454 |
| 129 | 3300025940 | Ga0207691_10010922 | Ga0207691_100109222 | 454 |
| 130 | 3300025942 | Ga0207689_10093093 | Ga0207689_100930932 | 454 |
| 131 | 3300025986 | Ga0207658_10001186 | Ga0207658_100011867 | 454 |
| 132 | 3300026067 | Ga0207678_10053856 | Ga0207678_100538563 | 454 |
| 133 | 3300026089 | Ga0207648_10009947 | Ga0207648_100099479 | 454 |
| 134 | 3300026121 | Ga0207683_10036935 | Ga0207683_100369353 | 454 |
| 135 | 3300028786 | Ga0307517_10000052 | Ga0307517_1000005267 | 454 |
| 136 | 3300028794 | Ga0307515_10001163 | Ga0307515_1000116339 | 454 |
| 137 | 3300028794 | Ga0307515_10057047 | Ga0307515_100570473 | 454 |
| 138 | 3300030522 | Ga0307512_10111670 | Ga0307512_101116702 | 454 |
| 139 | 3300031456 | Ga0307513_10094742 | Ga0307513_100947422 | 454 |
| 140 | 3300031507 | Ga0307509_10064074 | Ga0307509_100640743 | 454 |
| 141 | 3300031616 | Ga0307508_10000047 | Ga0307508_1000004737 | 454 |
| 142 | 3300031616 | Ga0307508_10001110 | Ga0307508_100011105 | 454 |
| 143 | 3300031616 | Ga0307508_10031256 | Ga0307508_100312563 | 454 |
| 144 | 3300033180 | Ga0307510_10047994 | Ga0307510_100479943 | 454 |
| 145 | 3300033180 | Ga0307510_10079686 | Ga0307510_100796862 | 454 |
| 146 | 3300037418 | Ga0395900_0000133 | Ga0395900_0000133_47564_49021 | 454 |
| 147 | 3300037466 | Ga0395898_0000337 | Ga0395898_0000337_98757_100214 | 454 |
| 148 | 3300037471 | Ga0395905_0012986 | Ga0395905_0012986_5212_6651 | 454 |
| 149 | 3300044656 | Ga0466969_0000037 | Ga0466969_0000037_51642_53108 | 454 |
| 150 | 3300044658 | Ga0466972_0007083 | Ga0466972_0007083_1209_2666 | 454 |
| 151 | 3300044693 | Ga0466961_0010055 | Ga0466961_0010055_2928_4394 | 454 |
| 152 | 3300044694 | Ga0466963_0008084 | Ga0466963_0008084_618_2087 | 454 |
| 153 | 3300044719 | Ga0466971_0016980 | Ga0466971_0016980_290_1774 | 454 |
| 154 | 3300045049 | Ga0466959_0022296 | Ga0466959_0022296_1753_3222 | 454 |
| 155 | 3300045049 | Ga0466959_0075969 | Ga0466959_0075969_519_2003 | 454 |
| 156 | 3300045976 | Ga0466967_0271775 | Ga0466967_0271775_25_1494 | 454 |
| 157 | 3300046528 | Ga0495642_0025806 | Ga0495642_0025806_83_1531 | 454 |
| 158 | 3300046542 | Ga0495597_0023592 | Ga0495597_0023592_941_2389 | 454 |
| 159 | 3300046694 | Ga0495649_0006892 | Ga0495649_0006892_1409_2857 | 454 |
| 160 | 3300047321 | Ga0495676_0017587 | Ga0495676_0017587_936_2381 | 454 |
| 161 | 3300047443 | Ga0495687_002586 | Ga0495687_002586_4931_6379 | 454 |
| 162 | 3300047443 | Ga0495687_016342 | Ga0495687_016342_1330_2778 | 454 |
| 163 | 3300048905 | Ga0496102_0008393 | Ga0496102_0008393_5890_7362 | 454 |
| 164 | 3300048909 | Ga0496106_0011131 | Ga0496106_0011131_518_1960 | 454 |
| 165 | 3300050493 | nmdc:mga0k408_1415_c1 | nmdc:mga0k408_1415_c1_374_1822 | 454 |
| 166 | 3300050493 | nmdc:mga0k408_25486_c1 | nmdc:mga0k408_25486_c1_940_2388 | 454 |
| 167 | 3300050493 | nmdc:mga0k408_4796_c1 | nmdc:mga0k408_4796_c1_313_1761 | 454 |
| 168 | 3300050496 | nmdc:mga07m45_3202_c1 | nmdc:mga07m45_3202_c1_963_2411 | 454 |
| 169 | 3300053086 | Ga0500578_0014549 | Ga0500578_0014549_399_1841 | 454 |
| 170 | 3300053088 | Ga0500644_0002012 | Ga0500644_0002012_3674_5119 | 454 |
| 171 | 3300053136 | Ga0500559_0000470 | Ga0500559_0000470_14206_15651 | 454 |
| 172 | 3300053139 | Ga0500568_0003300 | Ga0500568_0003300_3349_4797 | 454 |
| 173 | 3300053154 | Ga0500619_013143 | Ga0500619_013143_330_1775 | 454 |
| 174 | 3300053156 | Ga0500622_0001950 | Ga0500622_0001950_13286_14731 | 454 |
| 175 | 3300025297 | Ga0209758_1000287 | Ga0209758_100028794 | 455 |
| 176 | 3300044683 | Ga0466965_0026163 | Ga0466965_0026163_867_2357 | 455 |
| 177 | 3300053093 | Ga0500651_0092747 | Ga0500651_0092747_261_1727 | 455 |
| 178 | 3300002773 | JGI25152J39213_1004727 | JGI25152J39213_10047273 | 456 |
| 179 | 3300003771 | Ga0055526_1001195 | Ga0055526_10011953 | 456 |
| 180 | 3300025245 | Ga0207425_1000810 | Ga0207425_10008105 | 456 |
| 181 | 3300025258 | Ga0209129_1000025 | Ga0209129_1000025374 | 456 |
| 182 | 3300025295 | Ga0209564_1000039 | Ga0209564_1000039374 | 456 |
| 183 | 3300025297 | Ga0209758_1000163 | Ga0209758_1000163134 | 456 |
| 184 | 3300025299 | Ga0209256_1014348 | Ga0209256_10143482 | 456 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
PF00528
BPD_transp_1
Binding-protein-dependent transport system inner membrane component
265
470
0.94
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4ymu-assembly1.cif.gz_C | crystal structure of an amino acid abc transporter complex with arginines and atps | 0.5781 | 216 | 438 |
| 4ymu-assembly1.cif.gz_C | crystal structure of an amino acid abc transporter complex with arginines and atps | 0.5561 | 216 | 438 |
| 3tui-assembly2.cif.gz_E | inward facing conformations of the metni methionine abc transporter: cy5 native crystal form | 0.5124 | 216 | 425 |
| 7cad-assembly1.cif.gz_B | mycobacterium smegmatis sugabc complex | 0.4942 | 220 | 422 |
| 3tui-assembly2.cif.gz_E | inward facing conformations of the metni methionine abc transporter: cy5 native crystal form | 0.4935 | 216 | 425 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2FZQ8_74_286_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.6963 | 217 | 439 | 1.10.3720.10 |
| af_Q2FZQ8_74_286_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.6881 | 217 | 439 | 1.10.3720.10 |
| af_P33915_131_335_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.687 | 215 | 441 | 1.10.3720.10 |
| af_Q2G1F7_265_478_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.6857 | 216 | 435 | 1.10.3720.10 |
| af_Q2FZR6_145_349_1.10.3720.10 | Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like | 0.6845 | 215 | 439 | 1.10.3720.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2G2AEZ8-F1-model_v4 | deleted | 0.901 | 1 | 323 |
|
| AF-A0A523Q544-F1-model_v4 | Peptide ABC transporter ATP-binding protein | 0.8812 | 1 | 412 |
GO:0005524
GO:0005886 GO:0015833 GO:0016887 GO:0055085 |
| AF-A0A2T0XKD0-F1-model_v4 | Oligopeptide/dipeptide ABC transporter ATP-binding protein | 0.8763 | 1 | 452 |
GO:0005524
GO:0005886 GO:0015833 GO:0016887 GO:0055085 |
| AF-A0A3S0CGJ2-F1-model_v4 | deleted | 0.8761 | 2 | 355 |
|
| AF-A0A2T0XKD0-F1-model_v4 | Oligopeptide/dipeptide ABC transporter ATP-binding protein | 0.8672 | 1 | 452 |
GO:0005524
GO:0005886 GO:0015833 GO:0016887 GO:0055085 |
Predicted Structure (AlphaFold2)
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