F282758

General Info

Members Datasets Scaffolds Average Seq Length
184 124 368 208

Family's Representative Sequence

Representative Sequence 3300028379|Ga0268266_10172631|Ga0268266_101726312
Length 237
Sequence VRAVPLIERGRRRRAARKTMRQKAQTMSFGSLVFTPTITRLQERHGSRRQYERMERSGSAPQTLGRSEIEFIGERDSFYWATTGETGWPYIQHRGGPKGFLKVIDDHTLALADFRGNKQYISTGNLLTDNRVAMILVDYPQQARLKILGRVDVLEGEAARAWIERVRLPDYKAAIERVFVVHVEAFDWNCPQHITPRYTAEEIQAAVRPMEEQLETLERENRTLRDELTRLRAAAPR

Samples

Sample ID Description Type Environment
1 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
48 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
55 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
79 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
80 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
81 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
84 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
85 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
86 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
87 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
92 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
93 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
94 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
95 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
96 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
105 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
106 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
107 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
108 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
113 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
114 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
115 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
116 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
117 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
118 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
121 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
122 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
123 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
124 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.46
Metatranscriptomes 0.54
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.09
Nodule 0
Rhizoplane 2.72
Rhizosphere 92.93
Stem 0
Stem Tuber 0
Unclassified 4.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0268266_10172631 3300028379 Bacteria 1963
2 rootL2_10067791 3300003322 Bacteria 8114
3 Ga0065715_10182491 3300005293 Bacteria 1467
4 Ga0070658_10215217 3300005327 Bacteria 1624
5 Ga0070677_10163250 3300005333 Bacteria 1047
6 Ga0070666_10119618 3300005335 Bacteria 1826
7 Ga0068868_100272182 3300005338 Bacteria 1431
8 Ga0070660_100382885 3300005339 Bacteria 1161
9 Ga0070661_100271575 3300005344 Bacteria 1313
10 Ga0070675_100075064 3300005354 Bacteria 2810
11 Ga0070675_100274257 3300005354 Bacteria 1481
12 Ga0070674_100029267 3300005356 Bacteria 3625
13 Ga0070694_100803911 3300005444 Bacteria 771
14 Ga0070678_100580029 3300005456 Bacteria 999
15 Ga0070681_10007951 3300005458 Bacteria 10381
16 Ga0070681_10011607 3300005458 Bacteria 8721
17 Ga0070698_100121960 3300005471 Bacteria 2565
18 Ga0070684_100651965 3300005535 Bacteria 980
19 Ga0068853_100803041 3300005539 Bacteria 901
20 Ga0070672_100364570 3300005543 Bacteria 1234
21 Ga0070672_100458117 3300005543 Bacteria 1099
22 Ga0070686_100470422 3300005544 Bacteria 970
23 Ga0070665_100347325 3300005548 Bacteria 1489
24 Ga0070665_100459289 3300005548 Bacteria 1283
25 Ga0068855_100205519 3300005563 Bacteria 2215
26 Ga0068857_100001045 3300005577 Bacteria 21421
27 Ga0068859_100714536 3300005617 Unclassified 1092
28 Ga0068866_10191694 3300005718 Bacteria 1215
29 Ga0068863_100231189 3300005841 Bacteria 1784
30 Ga0068863_100326206 3300005841 Bacteria 1492
31 Ga0068858_100006953 3300005842 Bacteria 10994
32 Ga0068860_100204760 3300005843 Bacteria 1913
33 Ga0081538_10026359 3300005981 Bacteria 4066
34 Ga0097621_100027981 3300006237 Bacteria 4438
35 Ga0097621_100036804 3300006237 Bacteria 3916
36 Ga0097621_100269208 3300006237 Bacteria 1496
37 Ga0068871_100006726 3300006358 Bacteria 8161
38 Ga0068871_100015361 3300006358 Bacteria 5727
39 Ga0068871_100132792 3300006358 Bacteria 2112
40 Ga0068871_100292463 3300006358 Bacteria 1428
41 Ga0075431_100125390 3300006847 Bacteria 2650
42 Ga0075431_100410173 3300006847 Bacteria 1355
43 Ga0068865_100093527 3300006881 Bacteria 2186
44 Ga0097620_100714529 3300006931 Unclassified 1092
45 Ga0105240_10014272 3300009093 Bacteria 10852
46 Ga0105240_10122915 3300009093 Bacteria 3124
47 Ga0105240_10299827 3300009093 Bacteria 1839
48 Ga0105240_10450353 3300009093 Bacteria 1441
49 Ga0105240_10469075 3300009093 Bacteria 1405
50 Ga0105240_10473812 3300009093 Bacteria 1397
51 Ga0105245_10109419 3300009098 Bacteria 2568
52 Ga0105245_10370276 3300009098 Bacteria 1424
53 Ga0105247_10037541 3300009101 Bacteria 2956
54 Ga0105243_10029498 3300009148 Bacteria 4219
55 Ga0105243_10107050 3300009148 Bacteria 2331
56 Ga0105241_10222787 3300009174 Bacteria 1586
57 Ga0105241_10340143 3300009174 Bacteria 1300
58 Ga0105242_10036709 3300009176 Bacteria 3932
59 Ga0105242_10086367 3300009176 Bacteria 2633
60 Ga0105242_10152061 3300009176 Bacteria 2019
61 Ga0105248_10000047 3300009177 Bacteria 163513
62 Ga0105248_10013364 3300009177 Bacteria 9035
63 Ga0105248_10185691 3300009177 Unclassified 2343
64 Ga0105248_10212849 3300009177 Bacteria 2178
65 Ga0105248_10327415 3300009177 Bacteria 1726
66 Ga0105238_10483216 3300009551 Bacteria 1238
67 Ga0105238_10576024 3300009551 Bacteria 1132
68 Ga0105249_10066309 3300009553 Bacteria 3323
69 Ga0105239_10042785 3300010375 Bacteria 4963
70 Ga0105239_10640673 3300010375 Bacteria 1213
71 Ga0105246_11056287 3300011119 Bacteria 739
72 Ga0157370_10035774 3300013104 Bacteria 4824
73 Ga0157369_10116083 3300013105 Bacteria 2843
74 Ga0157369_11251405 3300013105 Bacteria 757
75 Ga0157374_10051983 3300013296 Bacteria 3814
76 Ga0157374_10238392 3300013296 Bacteria 1788
77 Ga0157374_10492696 3300013296 Bacteria 1229
78 Ga0163162_10108154 3300013306 Bacteria 2877
79 Ga0157375_10070510 3300013308 Bacteria 3505
80 Ga0157375_10320750 3300013308 Bacteria 1714
81 Ga0157375_10798655 3300013308 Bacteria 1092
82 Ga0163163_10126705 3300014325 Bacteria 2591
83 Ga0157379_10052074 3300014968 Bacteria 3656
84 Ga0157376_10072598 3300014969 Bacteria 2928
85 Ga0157376_10424393 3300014969 Bacteria 1291
86 Ga0157376_10668331 3300014969 Bacteria 1041
87 Ga0163161_10075453 3300017792 Bacteria 2474
88 Ga0213871_10016663 3300021441 Bacteria 1775
89 Ga0207642_10208596 3300025899 Bacteria 1084
90 Ga0207705_10295859 3300025909 Bacteria 1241
91 Ga0207707_10022652 3300025912 Bacteria 5493
92 Ga0207695_10020934 3300025913 Bacteria 7474
93 Ga0207695_10599948 3300025913 Bacteria 982
94 Ga0207695_10789316 3300025913 Bacteria 830
95 Ga0207693_10893218 3300025915 Unclassified 682
96 Ga0207659_10620783 3300025926 Bacteria 922
97 Ga0207686_10026967 3300025934 Bacteria 3358
98 Ga0207686_10128533 3300025934 Unclassified 1735
99 Ga0207686_10275642 3300025934 Bacteria 1239
100 Ga0207686_10320826 3300025934 Bacteria 1157
101 Ga0207709_10302776 3300025935 Bacteria 1189
102 Ga0207669_10806654 3300025937 Bacteria 779
103 Ga0207704_10041316 3300025938 Bacteria 2703
104 Ga0207691_10416725 3300025940 Bacteria 1145
105 Ga0207711_10000040 3300025941 Bacteria 162754
106 Ga0207711_10123185 3300025941 Unclassified 2317
107 Ga0207711_10198632 3300025941 Bacteria 1829
108 Ga0207711_10447325 3300025941 Bacteria 1203
109 Ga0207667_10193547 3300025949 Bacteria 2086
110 Ga0207651_10203339 3300025960 Bacteria 1589
111 Ga0207712_10102287 3300025961 Bacteria 2132
112 Ga0207658_10310691 3300025986 Unclassified 1361
113 Ga0207677_10228138 3300026023 Bacteria 1498
114 Ga0207677_10269525 3300026023 Bacteria 1392
115 Ga0207703_10003679 3300026035 Bacteria 12780
116 Ga0207639_10137208 3300026041 Bacteria 2033
117 Ga0207641_10264003 3300026088 Bacteria 1613
118 Ga0207648_10572609 3300026089 Bacteria 1039
119 Ga0207674_10003344 3300026116 Bacteria 19689
120 Ga0207698_11150716 3300026142 Bacteria 789
121 Ga0265354_1000208 3300028016 Bacteria 10825
122 Ga0268266_10002726 3300028379 Bacteria 18522
123 Ga0268266_10101119 3300028379 Bacteria 2541
124 Ga0265334_10062585 3300028573 Bacteria 1400
125 Ga0265338_10124713 3300028800 Bacteria 2046
126 Ga0265338_10190326 3300028800 Bacteria 1556
127 Ga0265338_10430852 3300028800 Bacteria 936
128 Ga0265760_10006157 3300031090 Unclassified 3429
129 Ga0265339_10124876 3300031249 Unclassified 1320
130 Ga0265331_10022883 3300031250 Bacteria 3183
131 Ga0265331_10025904 3300031250 Bacteria 2956
132 Ga0265331_10159637 3300031250 Bacteria 1022
133 Ga0265316_10020368 3300031344 Bacteria 5647
134 Ga0265316_10045545 3300031344 Bacteria 3481
135 Ga0307509_10012891 3300031507 Bacteria 9939
136 Ga0265314_10003198 3300031711 Bacteria 16041
137 Ga0265314_10003261 3300031711 Bacteria 15873
138 Ga0265342_10088172 3300031712 Bacteria 1782
139 Ga0265342_10149844 3300031712 Bacteria 1296
140 Ga0307416_101270023 3300032002 Bacteria 842
141 Ga0316212_1000723 3300033547 Bacteria 4183
142 Ga0316212_1005185 3300033547 Bacteria 1893
143 Ga0373937_0371035 3300036401 Bacteria 1357
144 Ga0436360_1326670 3300039438 Bacteria 3299
145 Ga0436361_1183485 3300039447 Bacteria 3313
146 Ga0495592_0084787 3300046454 Bacteria 2285
147 Ga0495651_0002970 3300046462 Bacteria 13093
148 Ga0495650_0003543 3300046471 Bacteria 11304
149 Ga0495650_0109316 3300046471 Bacteria 1028
150 Ga0495594_0075825 3300046499 Bacteria 1875
151 Ga0495618_0058466 3300046514 Bacteria 2442
152 Ga0495618_0250155 3300046514 Bacteria 1112
153 Ga0495628_0002397 3300046516 Bacteria 16900
154 Ga0495652_0012503 3300046529 Bacteria 7653
155 Ga0495587_0005471 3300046536 Bacteria 8283
156 Ga0495645_0011930 3300046543 Bacteria 6123
157 Ga0495667_0007673 3300046559 Bacteria 7318
158 Ga0495635_0059423 3300046663 Bacteria 2629
159 Ga0495657_0006386 3300046675 Bacteria 9227
160 Ga0495599_0005597 3300046678 Bacteria 7531
161 Ga0495623_0060975 3300046679 Bacteria 2366
162 Ga0495646_0096558 3300046680 Bacteria 1699
163 Ga0495646_0213058 3300046680 Bacteria 1047
164 Ga0495658_0239586 3300046683 Bacteria 1139
165 Ga0495600_0003972 3300046809 Bacteria 8786
166 Ga0495604_0014035 3300047317 Bacteria 6389
167 Ga0495604_0160016 3300047317 Bacteria 1592
168 Ga0495604_0491888 3300047317 Bacteria 797
169 Ga0495674_0019883 3300047319 Bacteria 6225
170 Ga0495674_0282586 3300047319 Bacteria 1359
171 Ga0495680_0005662 3300047322 Bacteria 11703
172 Ga0495675_0000497 3300047444 Bacteria 25512
173 Ga0495684_0304249 3300047471 Bacteria 1144
174 Ga0495602_0009806 3300048088 Bacteria 9944
175 Ga0496101_0271081 3300048904 Bacteria 1325
176 Ga0496104_0768108 3300048907 Bacteria 870
177 Ga0496108_0211589 3300048911 Bacteria 1683
178 Ga0496110_0136227 3300048913 Bacteria 2219
179 Ga0496114_0119169 3300048917 Bacteria 2268
180 Ga0496126_0035692 3300048929 Bacteria 4657
181 Ga0496126_0076148 3300048929 Bacteria 2977
182 nmdc:mga06r32_63218_c1 3300050510 Bacteria 3567
183 Ga0500644_0037015 3300053088 Bacteria 1592
184 Ga0500655_008971 3300053133 Bacteria 1799
185 Ga0268266_10172631
186 rootL2_10067791
187 Ga0065715_10182491
188 Ga0070658_10215217
189 Ga0070677_10163250
190 Ga0070666_10119618
191 Ga0068868_100272182
192 Ga0070660_100382885
193 Ga0070661_100271575
194 Ga0070675_100075064
195 Ga0070675_100274257
196 Ga0070674_100029267
197 Ga0070694_100803911
198 Ga0070678_100580029
199 Ga0070681_10007951
200 Ga0070681_10011607
201 Ga0070698_100121960
202 Ga0070684_100651965
203 Ga0068853_100803041
204 Ga0070672_100364570
205 Ga0070672_100458117
206 Ga0070686_100470422
207 Ga0070665_100347325
208 Ga0070665_100459289
209 Ga0068855_100205519
210 Ga0068857_100001045
211 Ga0068859_100714536
212 Ga0068866_10191694
213 Ga0068863_100231189
214 Ga0068863_100326206
215 Ga0068858_100006953
216 Ga0068860_100204760
217 Ga0081538_10026359
218 Ga0097621_100027981
219 Ga0097621_100036804
220 Ga0097621_100269208
221 Ga0068871_100006726
222 Ga0068871_100015361
223 Ga0068871_100132792
224 Ga0068871_100292463
225 Ga0075431_100125390
226 Ga0075431_100410173
227 Ga0068865_100093527
228 Ga0097620_100714529
229 Ga0105240_10014272
230 Ga0105240_10122915
231 Ga0105240_10299827
232 Ga0105240_10450353
233 Ga0105240_10469075
234 Ga0105240_10473812
235 Ga0105245_10109419
236 Ga0105245_10370276
237 Ga0105247_10037541
238 Ga0105243_10029498
239 Ga0105243_10107050
240 Ga0105241_10222787
241 Ga0105241_10340143
242 Ga0105242_10036709
243 Ga0105242_10086367
244 Ga0105242_10152061
245 Ga0105248_10000047
246 Ga0105248_10013364
247 Ga0105248_10185691
248 Ga0105248_10212849
249 Ga0105248_10327415
250 Ga0105238_10483216
251 Ga0105238_10576024
252 Ga0105249_10066309
253 Ga0105239_10042785
254 Ga0105239_10640673
255 Ga0105246_11056287
256 Ga0157370_10035774
257 Ga0157369_10116083
258 Ga0157369_11251405
259 Ga0157374_10051983
260 Ga0157374_10238392
261 Ga0157374_10492696
262 Ga0163162_10108154
263 Ga0157375_10070510
264 Ga0157375_10320750
265 Ga0157375_10798655
266 Ga0163163_10126705
267 Ga0157379_10052074
268 Ga0157376_10072598
269 Ga0157376_10424393
270 Ga0157376_10668331
271 Ga0163161_10075453
272 Ga0213871_10016663
273 Ga0207642_10208596
274 Ga0207705_10295859
275 Ga0207707_10022652
276 Ga0207695_10020934
277 Ga0207695_10599948
278 Ga0207695_10789316
279 Ga0207693_10893218
280 Ga0207659_10620783
281 Ga0207686_10026967
282 Ga0207686_10128533
283 Ga0207686_10275642
284 Ga0207686_10320826
285 Ga0207709_10302776
286 Ga0207669_10806654
287 Ga0207704_10041316
288 Ga0207691_10416725
289 Ga0207711_10000040
290 Ga0207711_10123185
291 Ga0207711_10198632
292 Ga0207711_10447325
293 Ga0207667_10193547
294 Ga0207651_10203339
295 Ga0207712_10102287
296 Ga0207658_10310691
297 Ga0207677_10228138
298 Ga0207677_10269525
299 Ga0207703_10003679
300 Ga0207639_10137208
301 Ga0207641_10264003
302 Ga0207648_10572609
303 Ga0207674_10003344
304 Ga0207698_11150716
305 Ga0265354_1000208
306 Ga0268266_10002726
307 Ga0268266_10101119
308 Ga0265334_10062585
309 Ga0265338_10124713
310 Ga0265338_10190326
311 Ga0265338_10430852
312 Ga0265760_10006157
313 Ga0265339_10124876
314 Ga0265331_10022883
315 Ga0265331_10025904
316 Ga0265331_10159637
317 Ga0265316_10020368
318 Ga0265316_10045545
319 Ga0307509_10012891
320 Ga0265314_10003198
321 Ga0265314_10003261
322 Ga0265342_10088172
323 Ga0265342_10149844
324 Ga0307416_101270023
325 Ga0316212_1000723
326 Ga0316212_1005185
327 Ga0373937_0371035
328 Ga0436360_1326670
329 Ga0436361_1183485
330 Ga0495592_0084787
331 Ga0495651_0002970
332 Ga0495650_0003543
333 Ga0495650_0109316
334 Ga0495594_0075825
335 Ga0495618_0058466
336 Ga0495618_0250155
337 Ga0495628_0002397
338 Ga0495652_0012503
339 Ga0495587_0005471
340 Ga0495645_0011930
341 Ga0495667_0007673
342 Ga0495635_0059423
343 Ga0495657_0006386
344 Ga0495599_0005597
345 Ga0495623_0060975
346 Ga0495646_0096558
347 Ga0495646_0213058
348 Ga0495658_0239586
349 Ga0495600_0003972
350 Ga0495604_0014035
351 Ga0495604_0160016
352 Ga0495604_0491888
353 Ga0495674_0019883
354 Ga0495674_0282586
355 Ga0495680_0005662
356 Ga0495675_0000497
357 Ga0495684_0304249
358 Ga0495602_0009806
359 Ga0496101_0271081
360 Ga0496104_0768108
361 Ga0496108_0211589
362 Ga0496110_0136227
363 Ga0496114_0119169
364 Ga0496126_0035692
365 Ga0496126_0076148
366 nmdc:mga06r32_63218_c1
367 Ga0500644_0037015
368 Ga0500655_008971

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

68

158

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2htd-assembly1.cif.gz_A crystal structure of a putative pyridoxamine 5'-phosphate oxidase (ldb0262) from lactobacillus delbrueckii subsp. at 1.60 a resolution 0.8078 36 161
7kq2-assembly1.cif.gz_A 1.98 a resolution crystal structure of group a streptococcus h111a hupz-v5-his6 0.7883 38 163
3vy5-assembly1.cif.gz_B n33q mutant of fmn-binding protein from desulfovibrio vulgaris (miyazaki f) 0.7786 44 164
7kq2-assembly1.cif.gz_A 1.98 a resolution crystal structure of group a streptococcus h111a hupz-v5-his6 0.7764 38 163
2re7-assembly1.cif.gz_A-2 crystal structure of a pyridoxamine 5'-phosphate oxidase related protein (psyc_0186) from psychrobacter arcticus 273-4 at 2.50 a resolution 0.7755 40 162
ID Description Score Start End Superfamily
2htdA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.81 36 161 2.30.110.10
5escD00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7714 38 164 2.30.110.10
2htdA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7627 36 161 2.30.110.10
5escD00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7598 38 164 2.30.110.10
2asfA00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7493 39 164 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A0K1J655-F1-model_v4 deleted 0.9753 38 163
AF-A0A0K1J655-F1-model_v4 deleted 0.9604 38 163
AF-A0A849S7W0-F1-model_v4 Pyridoxamine 5'-phosphate oxidase 0.955 3 132
AF-A0A6J4UVM3-F1-model_v4 Flavodoxin reductases (Ferredoxin-NADPH reductases) family 1 0.9439 4 164
AF-A0A4Q3TFN9-F1-model_v4 Pyridoxamine 5'-phosphate oxidase family protein 0.9415 1 150

Map