F282681
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 184 | 131 | 184 | 265 |
Family's Representative Sequence
| Representative Sequence | 3300025924|Ga0207694_10037773|Ga0207694_100377731 |
| Length | 297 |
| Sequence | MLSLHYAPEFFRRQTALSLGRRCSRFEVYGGVRIWWRMAFKSVGLDELVIDDEEAFLGLPLYAGLKRSLREAGHRFLVPEVGGQTSWDRALFLNLTFWSAEEGADVLCEERIPADVVAHAAWHHVVAREVSLAAGPGAPSSAALFFGESIASAFDLYLVGRLLPVAPDSSFIETQVPIMQEAAAEAGLSGPDFQALLEAICADPERAFEELRTLLFDVTSAVAACRGALEAAQVLERNDGHRFAPLLHHYQLSNWILYARAYAADTPERVQAVHRFDQLLRQSNGAVAWLQQNWLER |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 5 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 6 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 9 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Metagenome | Rhizosphere |
| 16 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 19 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 22 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 24 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 25 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 27 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 28 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 29 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 30 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 31 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 32 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 33 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 34 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 35 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300025271 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 73 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 74 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 75 | 3300028577 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG | Metagenome | Rhizosphere |
| 76 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 77 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 78 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 79 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 80 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 81 | 3300031242 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG | Metagenome | Rhizosphere |
| 82 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 83 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 84 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 85 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 86 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 87 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 88 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 89 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 90 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 91 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 92 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 93 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 94 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 95 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 96 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 97 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 98 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 99 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 100 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 101 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 102 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 103 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 104 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 105 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 111 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 112 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 113 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 114 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 115 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 116 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 117 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 118 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 119 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 123 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 125 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 127 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 128 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 7.61 |
| Rhizosphere | 91.3 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.09 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootH1_10184337 | 3300003323 | Bacteria | 4583 |
| 2 | Ga0070658_10001807 | 3300005327 | Bacteria | 17987 |
| 3 | Ga0070676_10013936 | 3300005328 | Bacteria | 4410 |
| 4 | Ga0070683_100000537 | 3300005329 | Bacteria | 26757 |
| 5 | Ga0070683_100111322 | 3300005329 | Unclassified | 2583 |
| 6 | Ga0070683_100403488 | 3300005329 | Bacteria | 1304 |
| 7 | Ga0070690_100009643 | 3300005330 | Bacteria | 5598 |
| 8 | Ga0070666_10171913 | 3300005335 | Bacteria | 1518 |
| 9 | Ga0070682_100025585 | 3300005337 | Bacteria | 3524 |
| 10 | Ga0068868_100007037 | 3300005338 | Bacteria | 7996 |
| 11 | Ga0070660_100413118 | 3300005339 | Unclassified | 1117 |
| 12 | Ga0070689_100000001 | 3300005340 | Bacteria | 1334580 |
| 13 | Ga0070689_100453473 | 3300005340 | Unclassified | 1091 |
| 14 | Ga0070668_100030992 | 3300005347 | Bacteria | 4069 |
| 15 | Ga0070669_100035723 | 3300005353 | Unclassified | 3600 |
| 16 | Ga0070674_100158364 | 3300005356 | Unclassified | 1716 |
| 17 | Ga0070673_100021691 | 3300005364 | Bacteria | 4663 |
| 18 | Ga0070673_100280008 | 3300005364 | Unclassified | 1463 |
| 19 | Ga0070673_100381377 | 3300005364 | Bacteria | 1257 |
| 20 | Ga0070688_100086822 | 3300005365 | Unclassified | 2036 |
| 21 | Ga0070659_100177007 | 3300005366 | Bacteria | 1749 |
| 22 | Ga0070667_100062946 | 3300005367 | Unclassified | 3143 |
| 23 | Ga0070710_10020648 | 3300005437 | Bacteria | 3421 |
| 24 | Ga0070701_10012570 | 3300005438 | Unclassified | 3823 |
| 25 | Ga0070662_100137103 | 3300005457 | Unclassified | 1893 |
| 26 | Ga0070685_10235351 | 3300005466 | Unclassified | 1206 |
| 27 | Ga0070707_100110797 | 3300005468 | Unclassified | 2662 |
| 28 | Ga0070679_100001178 | 3300005530 | Bacteria | 22916 |
| 29 | Ga0070684_100000733 | 3300005535 | Bacteria | 22745 |
| 30 | Ga0070684_100318394 | 3300005535 | Unclassified | 1429 |
| 31 | Ga0070672_100044962 | 3300005543 | Unclassified | 3412 |
| 32 | Ga0070686_100050475 | 3300005544 | Unclassified | 2644 |
| 33 | Ga0070704_100240334 | 3300005549 | Unclassified | 1482 |
| 34 | Ga0068855_100474310 | 3300005563 | Bacteria | 1363 |
| 35 | Ga0068857_100378521 | 3300005577 | Bacteria | 1314 |
| 36 | Ga0068854_100277780 | 3300005578 | Unclassified | 1347 |
| 37 | Ga0068866_10034561 | 3300005718 | Unclassified | 2463 |
| 38 | Ga0068861_100019038 | 3300005719 | Bacteria | 4899 |
| 39 | Ga0068863_100090121 | 3300005841 | Bacteria | 2908 |
| 40 | Ga0068858_100033050 | 3300005842 | Bacteria | 4805 |
| 41 | Ga0105240_10001597 | 3300009093 | Bacteria | 38497 |
| 42 | Ga0105243_10017597 | 3300009148 | Bacteria | 5405 |
| 43 | Ga0105237_10000213 | 3300009545 | Bacteria | 82121 |
| 44 | Ga0105238_10122005 | 3300009551 | Bacteria | 2586 |
| 45 | Ga0105249_10435517 | 3300009553 | Unclassified | 1347 |
| 46 | Ga0105239_10028625 | 3300010375 | Bacteria | 6125 |
| 47 | Ga0105239_10227288 | 3300010375 | Unclassified | 2093 |
| 48 | Ga0157369_10251392 | 3300013105 | Unclassified | 1845 |
| 49 | Ga0157374_10270515 | 3300013296 | Unclassified | 1675 |
| 50 | Ga0157379_10085419 | 3300014968 | Unclassified | 2828 |
| 51 | Ga0157376_10125978 | 3300014969 | Bacteria | 2278 |
| 52 | Ga0207666_1020831 | 3300025271 | Unclassified | 964 |
| 53 | Ga0207680_10057377 | 3300025903 | Unclassified | 2356 |
| 54 | Ga0207705_10009406 | 3300025909 | Bacteria | 7105 |
| 55 | Ga0207695_10000846 | 3300025913 | Bacteria | 56209 |
| 56 | Ga0207695_10159968 | 3300025913 | Bacteria | 2184 |
| 57 | Ga0207671_10000266 | 3300025914 | Bacteria | 78418 |
| 58 | Ga0207652_10028827 | 3300025921 | Bacteria | 4634 |
| 59 | Ga0207646_10055642 | 3300025922 | Bacteria | 3537 |
| 60 | Ga0207681_10001954 | 3300025923 | Bacteria | 13232 |
| 61 | Ga0207694_10037773 | 3300025924 | Bacteria | 3711 |
| 62 | Ga0207650_10016234 | 3300025925 | Bacteria | 5201 |
| 63 | Ga0207659_10111246 | 3300025926 | Bacteria | 2082 |
| 64 | Ga0207706_10050341 | 3300025933 | Bacteria | 3681 |
| 65 | Ga0207670_10000002 | 3300025936 | Bacteria | 783058 |
| 66 | Ga0207670_10022806 | 3300025936 | Bacteria | 3886 |
| 67 | Ga0207704_10117155 | 3300025938 | Unclassified | 1814 |
| 68 | Ga0207691_10022920 | 3300025940 | Bacteria | 5885 |
| 69 | Ga0207689_10271111 | 3300025942 | Unclassified | 1405 |
| 70 | Ga0207661_10055558 | 3300025944 | Bacteria | 3176 |
| 71 | Ga0207661_10338706 | 3300025944 | Bacteria | 1355 |
| 72 | Ga0207651_10050790 | 3300025960 | Bacteria | 2818 |
| 73 | Ga0207668_10071785 | 3300025972 | Unclassified | 2474 |
| 74 | Ga0207658_10047726 | 3300025986 | Unclassified | 3136 |
| 75 | Ga0207703_10218139 | 3300026035 | Bacteria | 1704 |
| 76 | Ga0207708_10001991 | 3300026075 | Bacteria | 15036 |
| 77 | Ga0207641_10177215 | 3300026088 | Bacteria | 1950 |
| 78 | Ga0207648_10022056 | 3300026089 | Bacteria | 5720 |
| 79 | Ga0207674_10394754 | 3300026116 | Bacteria | 1337 |
| 80 | Ga0207675_100047465 | 3300026118 | Unclassified | 4009 |
| 81 | Ga0207683_10055184 | 3300026121 | Bacteria | 3484 |
| 82 | Ga0265326_10022979 | 3300028558 | Bacteria | 1784 |
| 83 | Ga0265319_1012447 | 3300028563 | Bacteria | 3439 |
| 84 | Ga0265319_1043805 | 3300028563 | Bacteria | 1501 |
| 85 | Ga0265334_10011912 | 3300028573 | Bacteria | 3653 |
| 86 | Ga0265318_10000066 | 3300028577 | Bacteria | 101380 |
| 87 | Ga0265318_10000798 | 3300028577 | Bacteria | 20858 |
| 88 | Ga0265338_10012023 | 3300028800 | Bacteria | 9903 |
| 89 | Ga0265330_10000321 | 3300031235 | Bacteria | 34401 |
| 90 | Ga0265330_10002216 | 3300031235 | Bacteria | 10713 |
| 91 | Ga0265332_10002677 | 3300031238 | Bacteria | 8925 |
| 92 | Ga0265332_10026846 | 3300031238 | Bacteria | 2523 |
| 93 | Ga0265328_10008107 | 3300031239 | Bacteria | 4348 |
| 94 | Ga0265328_10021316 | 3300031239 | Bacteria | 2473 |
| 95 | Ga0265328_10043992 | 3300031239 | Bacteria | 1642 |
| 96 | Ga0265320_10000060 | 3300031240 | Bacteria | 101623 |
| 97 | Ga0265320_10004187 | 3300031240 | Bacteria | 9478 |
| 98 | Ga0265320_10004633 | 3300031240 | Bacteria | 8986 |
| 99 | Ga0265329_10001511 | 3300031242 | Bacteria | 11136 |
| 100 | Ga0265329_10024468 | 3300031242 | Unclassified | 2005 |
| 101 | Ga0265339_10005906 | 3300031249 | Bacteria | 8108 |
| 102 | Ga0265339_10072204 | 3300031249 | Bacteria | 1837 |
| 103 | Ga0265339_10164952 | 3300031249 | Bacteria | 1113 |
| 104 | Ga0265331_10000124 | 3300031250 | Bacteria | 101315 |
| 105 | Ga0265331_10000786 | 3300031250 | Bacteria | 26449 |
| 106 | Ga0265316_10012046 | 3300031344 | Bacteria | 7774 |
| 107 | Ga0265316_10016299 | 3300031344 | Bacteria | 6451 |
| 108 | Ga0265316_10017045 | 3300031344 | Bacteria | 6288 |
| 109 | Ga0265313_10000104 | 3300031595 | Bacteria | 85002 |
| 110 | Ga0265313_10009649 | 3300031595 | Bacteria | 6234 |
| 111 | Ga0265313_10036839 | 3300031595 | Bacteria | 2453 |
| 112 | Ga0265313_10040962 | 3300031595 | Bacteria | 2285 |
| 113 | Ga0265314_10000165 | 3300031711 | Bacteria | 101034 |
| 114 | Ga0265314_10003619 | 3300031711 | Bacteria | 14861 |
| 115 | Ga0265314_10013833 | 3300031711 | Bacteria | 6497 |
| 116 | Ga0265314_10045093 | 3300031711 | Bacteria | 3119 |
| 117 | Ga0265314_10062239 | 3300031711 | Bacteria | 2537 |
| 118 | Ga0265342_10001083 | 3300031712 | Bacteria | 26402 |
| 119 | Ga0265342_10004590 | 3300031712 | Bacteria | 10776 |
| 120 | Ga0265342_10007674 | 3300031712 | Bacteria | 7858 |
| 121 | Ga0307406_10215842 | 3300031901 | Bacteria | 1422 |
| 122 | Ga0307412_10008299 | 3300031911 | Bacteria | 5920 |
| 123 | Ga0373934_0012161 | 3300035086 | Bacteria | 3248 |
| 124 | Ga0373936_0046771 | 3300035113 | Bacteria | 1745 |
| 125 | Ga0373953_0135684 | 3300035117 | Bacteria | 1051 |
| 126 | Ga0373954_0010939 | 3300035118 | Bacteria | 4013 |
| 127 | Ga0373956_0038150 | 3300035119 | Bacteria | 2125 |
| 128 | Ga0373955_0049162 | 3300035172 | Bacteria | 2289 |
| 129 | Ga0373955_0082489 | 3300035172 | Bacteria | 1819 |
| 130 | Ga0373955_0208526 | 3300035172 | Bacteria | 1165 |
| 131 | Ga0373927_0058983 | 3300035695 | Bacteria | 2482 |
| 132 | Ga0373927_0104209 | 3300035695 | Bacteria | 1847 |
| 133 | Ga0373933_0001114 | 3300035724 | Bacteria | 16000 |
| 134 | Ga0373933_0044646 | 3300035724 | Bacteria | 2626 |
| 135 | Ga0373933_0229668 | 3300035724 | Bacteria | 1192 |
| 136 | Ga0373937_0001113 | 3300036401 | Bacteria | 22661 |
| 137 | Ga0373937_0014915 | 3300036401 | Bacteria | 6864 |
| 138 | Ga0373937_0015518 | 3300036401 | Bacteria | 6739 |
| 139 | Ga0373937_0169512 | 3300036401 | Bacteria | 2048 |
| 140 | Ga0373925_0013175 | 3300037068 | Bacteria | 5985 |
| 141 | Ga0373925_0014317 | 3300037068 | Bacteria | 5737 |
| 142 | Ga0373925_0139495 | 3300037068 | Unclassified | 1896 |
| 143 | Ga0373925_0268106 | 3300037068 | Unclassified | 1373 |
| 144 | Ga0395905_0150308 | 3300037471 | Bacteria | 2191 |
| 145 | Ga0436365_1466846 | 3300039437 | Bacteria | 2244 |
| 146 | Ga0439431_0064053 | 3300041997 | Unclassified | 971 |
| 147 | Ga0439445_0061463 | 3300042004 | Unclassified | 1028 |
| 148 | Ga0451576_0635612 | 3300045051 | Bacteria | 1121 |
| 149 | Ga0495664_0034887 | 3300046477 | Bacteria | 2961 |
| 150 | Ga0495630_0103289 | 3300046517 | Bacteria | 2157 |
| 151 | Ga0495630_0300983 | 3300046517 | Unclassified | 1225 |
| 152 | Ga0495586_0054273 | 3300046535 | Bacteria | 2172 |
| 153 | Ga0495634_0001992 | 3300046642 | Bacteria | 17395 |
| 154 | Ga0495674_0003233 | 3300047319 | Bacteria | 15817 |
| 155 | Ga0496100_0053726 | 3300048903 | Bacteria | 2625 |
| 156 | Ga0496101_0391287 | 3300048904 | Unclassified | 1094 |
| 157 | Ga0496104_0132644 | 3300048907 | Unclassified | 2393 |
| 158 | Ga0496105_0058886 | 3300048908 | Bacteria | 3170 |
| 159 | Ga0496105_0171058 | 3300048908 | Bacteria | 1781 |
| 160 | Ga0496107_0034350 | 3300048910 | Bacteria | 3633 |
| 161 | Ga0496107_0042255 | 3300048910 | Unclassified | 3274 |
| 162 | Ga0496108_0041088 | 3300048911 | Bacteria | 3859 |
| 163 | Ga0496109_0196056 | 3300048912 | Bacteria | 1898 |
| 164 | Ga0496114_0000051 | 3300048917 | Bacteria | 103209 |
| 165 | Ga0496114_0002659 | 3300048917 | Bacteria | 13631 |
| 166 | Ga0496114_0218638 | 3300048917 | Bacteria | 1672 |
| 167 | Ga0496115_0006940 | 3300048918 | Bacteria | 8324 |
| 168 | Ga0496115_0085466 | 3300048918 | Bacteria | 2573 |
| 169 | Ga0501034_0064137 | 3300049571 | Bacteria | 3688 |
| 170 | Ga0501067_0006349 | 3300049583 | Bacteria | 6554 |
| 171 | Ga0501068_0067937 | 3300049584 | Bacteria | 2173 |
| 172 | Ga0501069_0007788 | 3300049585 | Bacteria | 5624 |
| 173 | Ga0501069_0019023 | 3300049585 | Bacteria | 3710 |
| 174 | Ga0501070_0000082 | 3300049586 | Bacteria | 81256 |
| 175 | Ga0501073_0004113 | 3300049589 | Bacteria | 10916 |
| 176 | Ga0501073_0024615 | 3300049589 | Bacteria | 4322 |
| 177 | Ga0501079_0047642 | 3300049741 | Bacteria | 3307 |
| 178 | Ga0501080_0055427 | 3300049742 | Bacteria | 3692 |
| 179 | Ga0501083_0020330 | 3300049744 | Bacteria | 4619 |
| 180 | Ga0501083_0264258 | 3300049744 | Bacteria | 1119 |
| 181 | Ga0495601_0134387 | 3300053077 | Bacteria | 1612 |
| 182 | Ga0495619_0166959 | 3300053085 | Bacteria | 1521 |
| 183 | Ga0501082_0002248 | 3300060353 | Bacteria | 16905 |
| 184 | Ga0530510_0300072 | 3300061734 | Bacteria | 1202 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300028558 | Ga0265326_10022979 | Ga0265326_100229792 | 246 |
| 2 | 3300028563 | Ga0265319_1043805 | Ga0265319_10438052 | 246 |
| 3 | 3300028573 | Ga0265334_10011912 | Ga0265334_100119122 | 246 |
| 4 | 3300028577 | Ga0265318_10000798 | Ga0265318_1000079815 | 246 |
| 5 | 3300031235 | Ga0265330_10002216 | Ga0265330_100022167 | 246 |
| 6 | 3300031238 | Ga0265332_10026846 | Ga0265332_100268462 | 246 |
| 7 | 3300031239 | Ga0265328_10008107 | Ga0265328_100081073 | 246 |
| 8 | 3300031240 | Ga0265320_10004187 | Ga0265320_100041872 | 246 |
| 9 | 3300031249 | Ga0265339_10164952 | Ga0265339_101649522 | 246 |
| 10 | 3300031250 | Ga0265331_10000786 | Ga0265331_100007865 | 246 |
| 11 | 3300031344 | Ga0265316_10012046 | Ga0265316_100120468 | 246 |
| 12 | 3300031595 | Ga0265313_10040962 | Ga0265313_100409622 | 246 |
| 13 | 3300031711 | Ga0265314_10045093 | Ga0265314_100450932 | 246 |
| 14 | 3300031712 | Ga0265342_10004590 | Ga0265342_100045902 | 246 |
| 15 | 3300035172 | Ga0373955_0208526 | Ga0373955_0208526_397_1146 | 247 |
| 16 | 3300025925 | Ga0207650_10016234 | Ga0207650_100162343 | 248 |
| 17 | 3300031595 | Ga0265313_10036839 | Ga0265313_100368392 | 249 |
| 18 | 3300048904 | Ga0496101_0391287 | Ga0496101_0391287_89_892 | 249 |
| 19 | 3300048910 | Ga0496107_0042255 | Ga0496107_0042255_1330_2133 | 249 |
| 20 | 3300048917 | Ga0496114_0000051 | Ga0496114_0000051_92388_93191 | 249 |
| 21 | 3300048918 | Ga0496115_0006940 | Ga0496115_0006940_6446_7249 | 249 |
| 22 | 3300049571 | Ga0501034_0064137 | Ga0501034_0064137_656_1450 | 249 |
| 23 | 3300048911 | Ga0496108_0041088 | Ga0496108_0041088_2215_3066 | 251 |
| 24 | 3300048912 | Ga0496109_0196056 | Ga0496109_0196056_720_1571 | 251 |
| 25 | 3300031911 | Ga0307412_10008299 | Ga0307412_100082992 | 252 |
| 26 | 3300035724 | Ga0373933_0229668 | Ga0373933_0229668_80_844 | 254 |
| 27 | 3300036401 | Ga0373937_0014915 | Ga0373937_0014915_6013_6777 | 254 |
| 28 | 3300037471 | Ga0395905_0150308 | Ga0395905_0150308_1352_2122 | 255 |
| 29 | 3300049744 | Ga0501083_0264258 | Ga0501083_0264258_330_1103 | 255 |
| 30 | 3300035086 | Ga0373934_0012161 | Ga0373934_0012161_2201_2971 | 256 |
| 31 | 3300035172 | Ga0373955_0049162 | Ga0373955_0049162_666_1436 | 256 |
| 32 | 3300035724 | Ga0373933_0001114 | Ga0373933_0001114_9307_10077 | 256 |
| 33 | 3300036401 | Ga0373937_0001113 | Ga0373937_0001113_17031_17801 | 256 |
| 34 | 3300037068 | Ga0373925_0014317 | Ga0373925_0014317_604_1374 | 256 |
| 35 | 3300005329 | Ga0070683_100111322 | Ga0070683_1001113222 | 257 |
| 36 | 3300005338 | Ga0068868_100007037 | Ga0068868_1000070375 | 257 |
| 37 | 3300014968 | Ga0157379_10085419 | Ga0157379_100854193 | 257 |
| 38 | 3300014969 | Ga0157376_10125978 | Ga0157376_101259781 | 257 |
| 39 | 3300031344 | Ga0265316_10017045 | Ga0265316_100170455 | 257 |
| 40 | 3300031711 | Ga0265314_10013833 | Ga0265314_100138336 | 257 |
| 41 | 3300035113 | Ga0373936_0046771 | Ga0373936_0046771_377_1159 | 257 |
| 42 | 3300035695 | Ga0373927_0058983 | Ga0373927_0058983_907_1686 | 257 |
| 43 | 3300037068 | Ga0373925_0139495 | Ga0373925_0139495_1022_1801 | 257 |
| 44 | 3300046477 | Ga0495664_0034887 | Ga0495664_0034887_1813_2595 | 257 |
| 45 | 3300046517 | Ga0495630_0300983 | Ga0495630_0300983_26_808 | 257 |
| 46 | 3300046642 | Ga0495634_0001992 | Ga0495634_0001992_10723_11505 | 257 |
| 47 | 3300047319 | Ga0495674_0003233 | Ga0495674_0003233_14166_14948 | 257 |
| 48 | 3300048903 | Ga0496100_0053726 | Ga0496100_0053726_1610_2392 | 257 |
| 49 | 3300048907 | Ga0496104_0132644 | Ga0496104_0132644_1217_1999 | 257 |
| 50 | 3300048908 | Ga0496105_0058886 | Ga0496105_0058886_1563_2339 | 257 |
| 51 | 3300048910 | Ga0496107_0034350 | Ga0496107_0034350_1024_1806 | 257 |
| 52 | 3300048917 | Ga0496114_0002659 | Ga0496114_0002659_5655_6437 | 257 |
| 53 | 3300053077 | Ga0495601_0134387 | Ga0495601_0134387_768_1550 | 257 |
| 54 | 3300031249 | Ga0265339_10072204 | Ga0265339_100722042 | 258 |
| 55 | 3300009551 | Ga0105238_10122005 | Ga0105238_101220053 | 259 |
| 56 | 3300025924 | Ga0207694_10037773 | Ga0207694_100377731 | 259 |
| 57 | 3300028563 | Ga0265319_1012447 | Ga0265319_10124472 | 259 |
| 58 | 3300037068 | Ga0373925_0268106 | Ga0373925_0268106_530_1318 | 259 |
| 59 | 3300005329 | Ga0070683_100403488 | Ga0070683_1004034881 | 260 |
| 60 | 3300025938 | Ga0207704_10117155 | Ga0207704_101171551 | 260 |
| 61 | 3300025944 | Ga0207661_10338706 | Ga0207661_103387062 | 260 |
| 62 | 3300049584 | Ga0501068_0067937 | Ga0501068_0067937_151_948 | 260 |
| 63 | 3300049585 | Ga0501069_0007788 | Ga0501069_0007788_2854_3648 | 260 |
| 64 | 3300049585 | Ga0501069_0019023 | Ga0501069_0019023_2822_3619 | 260 |
| 65 | 3300049586 | Ga0501070_0000082 | Ga0501070_0000082_32448_33245 | 260 |
| 66 | 3300049589 | Ga0501073_0024615 | Ga0501073_0024615_2343_3140 | 260 |
| 67 | 3300049741 | Ga0501079_0047642 | Ga0501079_0047642_267_1064 | 260 |
| 68 | 3300049742 | Ga0501080_0055427 | Ga0501080_0055427_2632_3429 | 260 |
| 69 | 3300049744 | Ga0501083_0020330 | Ga0501083_0020330_2066_2863 | 260 |
| 70 | 3300060353 | Ga0501082_0002248 | Ga0501082_0002248_13780_14577 | 260 |
| 71 | 3300061734 | Ga0530510_0300072 | Ga0530510_0300072_342_1139 | 260 |
| 72 | 3300005327 | Ga0070658_10001807 | Ga0070658_100018076 | 261 |
| 73 | 3300005329 | Ga0070683_100000537 | Ga0070683_10000053719 | 261 |
| 74 | 3300005337 | Ga0070682_100025585 | Ga0070682_1000255852 | 261 |
| 75 | 3300005339 | Ga0070660_100413118 | Ga0070660_1004131181 | 261 |
| 76 | 3300005366 | Ga0070659_100177007 | Ga0070659_1001770072 | 261 |
| 77 | 3300005437 | Ga0070710_10020648 | Ga0070710_100206481 | 261 |
| 78 | 3300005468 | Ga0070707_100110797 | Ga0070707_1001107972 | 261 |
| 79 | 3300005535 | Ga0070684_100000733 | Ga0070684_10000073311 | 261 |
| 80 | 3300005563 | Ga0068855_100474310 | Ga0068855_1004743101 | 261 |
| 81 | 3300013296 | Ga0157374_10270515 | Ga0157374_102705152 | 261 |
| 82 | 3300025909 | Ga0207705_10009406 | Ga0207705_100094067 | 261 |
| 83 | 3300025913 | Ga0207695_10159968 | Ga0207695_101599682 | 261 |
| 84 | 3300025921 | Ga0207652_10028827 | Ga0207652_100288271 | 261 |
| 85 | 3300025922 | Ga0207646_10055642 | Ga0207646_100556422 | 261 |
| 86 | 3300025944 | Ga0207661_10055558 | Ga0207661_100555584 | 261 |
| 87 | 3300031711 | Ga0265314_10062239 | Ga0265314_100622392 | 261 |
| 88 | 3300031712 | Ga0265342_10001083 | Ga0265342_1000108311 | 261 |
| 89 | 3300035117 | Ga0373953_0135684 | Ga0373953_0135684_106_900 | 261 |
| 90 | 3300035118 | Ga0373954_0010939 | Ga0373954_0010939_570_1367 | 261 |
| 91 | 3300035119 | Ga0373956_0038150 | Ga0373956_0038150_1050_1847 | 261 |
| 92 | 3300035172 | Ga0373955_0082489 | Ga0373955_0082489_88_885 | 261 |
| 93 | 3300035695 | Ga0373927_0104209 | Ga0373927_0104209_777_1571 | 261 |
| 94 | 3300035724 | Ga0373933_0044646 | Ga0373933_0044646_973_1767 | 261 |
| 95 | 3300036401 | Ga0373937_0015518 | Ga0373937_0015518_424_1221 | 261 |
| 96 | 3300045051 | Ga0451576_0635612 | Ga0451576_0635612_172_957 | 261 |
| 97 | 3300048908 | Ga0496105_0171058 | Ga0496105_0171058_442_1248 | 261 |
| 98 | 3300049583 | Ga0501067_0006349 | Ga0501067_0006349_1062_1874 | 261 |
| 99 | 3300053085 | Ga0495619_0166959 | Ga0495619_0166959_662_1459 | 261 |
| 100 | 3300046535 | Ga0495586_0054273 | Ga0495586_0054273_1162_1971 | 262 |
| 101 | 3300005364 | Ga0070673_100381377 | Ga0070673_1003813772 | 263 |
| 102 | 3300009093 | Ga0105240_10001597 | Ga0105240_1000159713 | 263 |
| 103 | 3300025913 | Ga0207695_10000846 | Ga0207695_1000084632 | 263 |
| 104 | 3300025926 | Ga0207659_10111246 | Ga0207659_101112462 | 263 |
| 105 | 3300026121 | Ga0207683_10055184 | Ga0207683_100551842 | 263 |
| 106 | 3300028577 | Ga0265318_10000066 | Ga0265318_1000006683 | 263 |
| 107 | 3300031235 | Ga0265330_10000321 | Ga0265330_1000032125 | 263 |
| 108 | 3300031238 | Ga0265332_10002677 | Ga0265332_100026775 | 263 |
| 109 | 3300031239 | Ga0265328_10043992 | Ga0265328_100439921 | 263 |
| 110 | 3300031240 | Ga0265320_10000060 | Ga0265320_100000604 | 263 |
| 111 | 3300031242 | Ga0265329_10001511 | Ga0265329_1000151111 | 263 |
| 112 | 3300031250 | Ga0265331_10000124 | Ga0265331_1000012483 | 263 |
| 113 | 3300031344 | Ga0265316_10016299 | Ga0265316_100162995 | 263 |
| 114 | 3300031595 | Ga0265313_10000104 | Ga0265313_100001044 | 263 |
| 115 | 3300031595 | Ga0265313_10009649 | Ga0265313_100096493 | 263 |
| 116 | 3300031711 | Ga0265314_10000165 | Ga0265314_1000016583 | 263 |
| 117 | 3300041997 | Ga0439431_0064053 | Ga0439431_0064053_105_923 | 263 |
| 118 | 3300042004 | Ga0439445_0061463 | Ga0439445_0061463_96_914 | 263 |
| 119 | 3300005340 | Ga0070689_100000001 | Ga0070689_100000001466 | 264 |
| 120 | 3300005364 | Ga0070673_100021691 | Ga0070673_1000216915 | 264 |
| 121 | 3300005530 | Ga0070679_100001178 | Ga0070679_1000011789 | 264 |
| 122 | 3300005535 | Ga0070684_100318394 | Ga0070684_1003183941 | 264 |
| 123 | 3300005577 | Ga0068857_100378521 | Ga0068857_1003785211 | 264 |
| 124 | 3300005841 | Ga0068863_100090121 | Ga0068863_1000901212 | 264 |
| 125 | 3300013105 | Ga0157369_10251392 | Ga0157369_102513922 | 264 |
| 126 | 3300025936 | Ga0207670_10000002 | Ga0207670_10000002363 | 264 |
| 127 | 3300025960 | Ga0207651_10050790 | Ga0207651_100507903 | 264 |
| 128 | 3300026088 | Ga0207641_10177215 | Ga0207641_101772152 | 264 |
| 129 | 3300026116 | Ga0207674_10394754 | Ga0207674_103947541 | 264 |
| 130 | 3300037068 | Ga0373925_0013175 | Ga0373925_0013175_1137_1973 | 264 |
| 131 | 3300048918 | Ga0496115_0085466 | Ga0496115_0085466_582_1382 | 264 |
| 132 | 3300003323 | rootH1_10184337 | rootH1_101843372 | 265 |
| 133 | 3300005328 | Ga0070676_10013936 | Ga0070676_100139364 | 265 |
| 134 | 3300005330 | Ga0070690_100009643 | Ga0070690_1000096433 | 265 |
| 135 | 3300005335 | Ga0070666_10171913 | Ga0070666_101719132 | 265 |
| 136 | 3300005340 | Ga0070689_100453473 | Ga0070689_1004534731 | 265 |
| 137 | 3300005347 | Ga0070668_100030992 | Ga0070668_1000309924 | 265 |
| 138 | 3300005353 | Ga0070669_100035723 | Ga0070669_1000357232 | 265 |
| 139 | 3300005356 | Ga0070674_100158364 | Ga0070674_1001583641 | 265 |
| 140 | 3300005364 | Ga0070673_100280008 | Ga0070673_1002800082 | 265 |
| 141 | 3300005365 | Ga0070688_100086822 | Ga0070688_1000868222 | 265 |
| 142 | 3300005367 | Ga0070667_100062946 | Ga0070667_1000629463 | 265 |
| 143 | 3300005438 | Ga0070701_10012570 | Ga0070701_100125703 | 265 |
| 144 | 3300005457 | Ga0070662_100137103 | Ga0070662_1001371032 | 265 |
| 145 | 3300005466 | Ga0070685_10235351 | Ga0070685_102353512 | 265 |
| 146 | 3300005543 | Ga0070672_100044962 | Ga0070672_1000449623 | 265 |
| 147 | 3300005544 | Ga0070686_100050475 | Ga0070686_1000504753 | 265 |
| 148 | 3300005549 | Ga0070704_100240334 | Ga0070704_1002403342 | 265 |
| 149 | 3300005578 | Ga0068854_100277780 | Ga0068854_1002777801 | 265 |
| 150 | 3300005718 | Ga0068866_10034561 | Ga0068866_100345612 | 265 |
| 151 | 3300005719 | Ga0068861_100019038 | Ga0068861_1000190385 | 265 |
| 152 | 3300005842 | Ga0068858_100033050 | Ga0068858_1000330506 | 265 |
| 153 | 3300009148 | Ga0105243_10017597 | Ga0105243_100175972 | 265 |
| 154 | 3300009545 | Ga0105237_10000213 | Ga0105237_1000021332 | 265 |
| 155 | 3300009553 | Ga0105249_10435517 | Ga0105249_104355172 | 265 |
| 156 | 3300010375 | Ga0105239_10028625 | Ga0105239_100286252 | 265 |
| 157 | 3300010375 | Ga0105239_10227288 | Ga0105239_102272883 | 265 |
| 158 | 3300025271 | Ga0207666_1020831 | Ga0207666_10208311 | 265 |
| 159 | 3300025903 | Ga0207680_10057377 | Ga0207680_100573772 | 265 |
| 160 | 3300025914 | Ga0207671_10000266 | Ga0207671_1000026652 | 265 |
| 161 | 3300025923 | Ga0207681_10001954 | Ga0207681_100019542 | 265 |
| 162 | 3300025933 | Ga0207706_10050341 | Ga0207706_100503412 | 265 |
| 163 | 3300025936 | Ga0207670_10022806 | Ga0207670_100228065 | 265 |
| 164 | 3300025940 | Ga0207691_10022920 | Ga0207691_100229201 | 265 |
| 165 | 3300025942 | Ga0207689_10271111 | Ga0207689_102711113 | 265 |
| 166 | 3300025972 | Ga0207668_10071785 | Ga0207668_100717852 | 265 |
| 167 | 3300025986 | Ga0207658_10047726 | Ga0207658_100477263 | 265 |
| 168 | 3300026035 | Ga0207703_10218139 | Ga0207703_102181392 | 265 |
| 169 | 3300026075 | Ga0207708_10001991 | Ga0207708_100019913 | 265 |
| 170 | 3300026089 | Ga0207648_10022056 | Ga0207648_100220565 | 265 |
| 171 | 3300026118 | Ga0207675_100047465 | Ga0207675_1000474654 | 265 |
| 172 | 3300028800 | Ga0265338_10012023 | Ga0265338_100120231 | 265 |
| 173 | 3300031239 | Ga0265328_10021316 | Ga0265328_100213161 | 265 |
| 174 | 3300031240 | Ga0265320_10004633 | Ga0265320_100046333 | 265 |
| 175 | 3300031242 | Ga0265329_10024468 | Ga0265329_100244682 | 265 |
| 176 | 3300031249 | Ga0265339_10005906 | Ga0265339_100059065 | 265 |
| 177 | 3300031711 | Ga0265314_10003619 | Ga0265314_1000361910 | 265 |
| 178 | 3300031712 | Ga0265342_10007674 | Ga0265342_100076749 | 265 |
| 179 | 3300031901 | Ga0307406_10215842 | Ga0307406_102158422 | 265 |
| 180 | 3300036401 | Ga0373937_0169512 | Ga0373937_0169512_521_1342 | 265 |
| 181 | 3300039437 | Ga0436365_1466846 | Ga0436365_1466846_807_1634 | 265 |
| 182 | 3300046517 | Ga0495630_0103289 | Ga0495630_0103289_65_913 | 265 |
| 183 | 3300048917 | Ga0496114_0218638 | Ga0496114_0218638_796_1635 | 265 |
| 184 | 3300049589 | Ga0501073_0004113 | Ga0501073_0004113_3748_4575 | 265 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 4m70-assembly3.cif.gz_I | crystal structure of potato rx-cc domain in complex with rangap2-wpp domain | 0.3493 | 110 | 223 |
| 4m70-assembly5.cif.gz_Q | crystal structure of potato rx-cc domain in complex with rangap2-wpp domain | 0.3487 | 110 | 223 |
| 5qip-assembly1.cif.gz_A | covalent fragment group deposition -- crystal structure of outb2 in complex with pcm-0102153 | 0.3448 | 115 | 222 |
| 4m70-assembly4.cif.gz_H | crystal structure of potato rx-cc domain in complex with rangap2-wpp domain | 0.3409 | 108 | 223 |
| 4m70-assembly2.cif.gz_L | crystal structure of potato rx-cc domain in complex with rangap2-wpp domain | 0.3388 | 108 | 223 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P71730_190_310_1.20.272.10 | Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; | 0.4713 | 140 | 248 | 1.20.272.10 |
| af_Q8I6T8_105_192_1.10.287.10 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins;S15/NS1, RNA-binding | 0.3946 | 82 | 203 | 1.10.287.10 |
| af_P71730_190_310_1.20.272.10 | Mainly Alpha;Up-down Bundle;Zinc Finger, Delta Prime; domain 3; | 0.3895 | 140 | 248 | 1.20.272.10 |
| af_Q8I6T8_105_192_1.10.287.10 | Mainly Alpha;Orthogonal Bundle;Helix Hairpins;S15/NS1, RNA-binding | 0.381 | 82 | 203 | 1.10.287.10 |
| 4m70Q00 | Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; | 0.3487 | 110 | 223 | 1.20.5.4130 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A4Q3JM68-F1-model_v4 | Uncharacterized protein | 0.9511 | 3 | 258 |
|
| AF-A0A7Y5KPZ1-F1-model_v4 | Uncharacterized protein | 0.9494 | 1 | 257 |
|
| AF-A0A2L0ELE6-F1-model_v4 | Uncharacterized protein | 0.9462 | 2 | 258 |
|
| AF-A0A150PG47-F1-model_v4 | Uncharacterized protein | 0.9429 | 1 | 220 |
|
| AF-A0A7Y5KPZ1-F1-model_v4 | Uncharacterized protein | 0.9421 | 1 | 257 |
|
Predicted Structure (AlphaFold2)
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