F282356
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 184 | 147 | 368 | 470 |
Family's Representative Sequence
| Representative Sequence | 3300006353|Ga0075370_10090558|Ga0075370_100905581 |
| Length | 490 |
| Sequence | MTRPATQTTDLIARWQFAITTVYHFLFVPITIGLSAIIAGYQTAWLRTRNEQWLRLTKFFGKLFLINFAIGVVTGIVQEFQFGMNWSDYSRFVGDVFGAPLAIEGLLAFFLESTFLGLWIFGWDRLPEKLHAACIWLVHIGTLFSAYFILAANSWMQNPVGYGFNPDTGRAEMTDFAAVLFNKVQLVTFPHVVLSAYMTGAAFVVGIALWQLRRHRAPDATADTGDAGLYRRAARTGAVVLLVSGLGVLVSGDVQGKIMTEVQPMKMAAAEALYQTEDPADFSILTVGSLDGSEEKFAVKIPNLLSFLATGGFSGEVKGIDELRAQYQETYGSDPGASYYSPGDYTPVIPLTYWTFRLMMGLGLAAMAVGAWVLWATRRGRAPAGRLFMAAAMALPFLPLFANSFGWIFTEVGRQPWAVFGLLTTEQSVSPTVSTGEVLTSLITLTLVYGVLAVVEVRLLLTYIVKGAEPLPEPSDDDPHDPDRPLAFAY |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 2 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 10 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 11 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 12 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 13 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 14 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 15 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 16 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 17 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 24 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 33 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 34 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 35 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 36 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 37 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 38 | 3300033528 | Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 39 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 40 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 41 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 42 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 43 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 44 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 45 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 46 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 47 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 48 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 49 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 50 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 51 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 52 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 53 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 54 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 55 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 56 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 57 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 58 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 59 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 60 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 61 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 62 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 63 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 64 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 65 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 66 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 67 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 68 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 69 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 70 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 71 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 72 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 73 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 74 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 75 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 76 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 77 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 78 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 79 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 80 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 81 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 82 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 83 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 84 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 85 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 86 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 87 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 88 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 89 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 90 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 91 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 92 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 93 | 3300061734 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) | Metagenome | Rhizosphere |
| 94 | 2501939600 | Micromonospora sp. L5 | Isolate | Unclassified |
| 95 | 2515154088 | Salinispora arenicola CNT800 | Isolate | Rhizosphere |
| 96 | 2515154129 | Salinispora pacifica CNS103 | Isolate | Rhizosphere |
| 97 | 2515154137 | Salinispora arenicola CNX482 | Isolate | Rhizosphere |
| 98 | 2515154202 | Salinispora pacifica CNT084 | Isolate | Rhizosphere |
| 99 | 2515154203 | Salinispora arenicola CNR921 | Isolate | Rhizosphere |
| 100 | 2622736626 | Micromonospora rhizosphaerae DSM 45431 | Isolate | Rhizosphere |
| 101 | 2643221567 | Phycicoccus sp. Root563 | Isolate | Unclassified |
| 102 | 2643221576 | Nocardioides sp. Root614 | Isolate | Unclassified |
| 103 | 2643221590 | Nocardioides sp. Root682 | Isolate | Unclassified |
| 104 | 2643221604 | Nocardioides sp. Root190 | Isolate | Unclassified |
| 105 | 2643221617 | Nocardioides sp. Root79 | Isolate | Unclassified |
| 106 | 2643221620 | Nocardioides sp. Root240 | Isolate | Unclassified |
| 107 | 2643221624 | Phycicoccus sp. Root101 | Isolate | Unclassified |
| 108 | 2772190715 | Micromonospora chokoriensis NRRL B-24750 | Isolate | Unclassified |
| 109 | 2811994874 | Nocardioides sp. SLBN-35 | Isolate | Unclassified |
| 110 | 2831935698 | Jishengella sp. AZ1-13 | Isolate | Unclassified |
| 111 | 2832004796 | Micromonospora endophytica JCM 18317 | Isolate | Unclassified |
| 112 | 2855386786 | Nocardioides ferulae EGI 63112 | Isolate | Unclassified |
| 113 | 2855670206 | Micromonospora noduli Lupac 07 | Isolate | Nodule |
| 114 | 2855676851 | Micromonospora saelicesensis GAR05 | Isolate | Unclassified |
| 115 | 2855683550 | Micromonospora sp. RP3T | Isolate | Unclassified |
| 116 | 2856858025 | Micromonospora aurantiaca 110B(2018) | Isolate | Unclassified |
| 117 | 2857288857 | Micromonospora noduli ONO23 | Isolate | Unclassified |
| 118 | 2858848962 | Micromonospora saelicesensis GAR06 | Isolate | Unclassified |
| 119 | 2858868258 | Micromonospora sp. MH33 | Isolate | Unclassified |
| 120 | 2858882152 | Micromonospora noduli MED15 | Isolate | Nodule |
| 121 | 2858888857 | Micromonospora saelicesensis Lupac 06 | Isolate | Unclassified |
| 122 | 2858895516 | Micromonospora saelicesensis PSN13 | Isolate | Unclassified |
| 123 | 2858902515 | Micromonospora sp. MW-13 | Isolate | Rhizosphere |
| 124 | 2866065130 | Micromonospora endophytica DSM 45430 | Isolate | Unclassified |
| 125 | 2867302475 | Micromonospora globbae WPS1-2 | Isolate | Unclassified |
| 126 | 2867312974 | Micromonospora musae NGC1-4 | Isolate | Unclassified |
| 127 | 2867319477 | Micromonospora musae MS1-9 | Isolate | Unclassified |
| 128 | 2867507094 | Micromonospora zingiberis PLAI 1-1 | Isolate | Unclassified |
| 129 | 2869048445 | Micromonospora saelicesensis PSN01 | Isolate | Unclassified |
| 130 | 2869061728 | Micromonospora noduli ONO86 | Isolate | Unclassified |
| 131 | 2869068681 | Micromonospora noduli GUI43 | Isolate | Unclassified |
| 132 | 2880489317 | Micromonospora ureilytica DSM 101692 | Isolate | Unclassified |
| 133 | 2880495981 | Micromonospora vinacea DSM 101695 | Isolate | Unclassified |
| 134 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 135 | 2902582711 | Micromonospora sp. AP08 | Isolate | Unclassified |
| 136 | 2919446982 | Phycicoccus sp. 3266 | Isolate | Rhizosphere |
| 137 | 2929219909 | Micromonospora sp. R-75348 Hybrid assembly | Isolate | Unclassified |
| 138 | 2929226422 | Micromonospora sp. R-74116 Hybrid assembly | Isolate | Unclassified |
| 139 | 2996221748 | Micromonospora veneta CAP181 | Isolate | Unclassified |
| 140 | 649633069 | Micromonospora sp. L5 | Isolate | Unclassified |
| 141 | 8003830390 | Micromonospora parastrephiae STR1_7 | Isolate | Rhizosphere |
| 142 | 8003856774 | Micromonospora echinofusca MPMI6 | Isolate | Unclassified |
| 143 | 8003870546 | Micromonospora tarensis STR1s_6 | Isolate | Rhizosphere |
| 144 | 8054704163 | Micromonospora trifolii NIE79 | Isolate | Nodule |
| 145 | 8054727385 | Micromonospora alfalfae MED01 | Isolate | Nodule |
| 146 | 8054734606 | Micromonospora hortensis NIE111 | Isolate | Nodule |
| 147 | 8055412473 | Micromonospora phytophila DSM 105363 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 69.57 |
| Metatranscriptomes | 1.09 |
| Isolates | 29.35 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 15.22 |
| Nodule | 3.26 |
| Rhizoplane | 9.24 |
| Rhizosphere | 51.63 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0075370_10090558 | 3300006353 | Bacteria | 1764 |
| 2 | Ga0006562J51391_1006541 | 3300003578 | Bacteria | 6516 |
| 3 | Ga0070683_100046227 | 3300005329 | Bacteria | 4020 |
| 4 | Ga0070683_100114993 | 3300005329 | Bacteria | 2540 |
| 5 | Ga0070659_100028769 | 3300005366 | Bacteria | 4293 |
| 6 | Ga0070667_100081391 | 3300005367 | Bacteria | 2771 |
| 7 | Ga0070663_100065971 | 3300005455 | Bacteria | 2622 |
| 8 | Ga0070684_100068988 | 3300005535 | Bacteria | 3108 |
| 9 | Ga0070665_100009099 | 3300005548 | Bacteria | 10061 |
| 10 | Ga0068857_100081071 | 3300005577 | Bacteria | 2898 |
| 11 | Ga0068860_100000417 | 3300005843 | Bacteria | 55103 |
| 12 | Ga0075365_10000624 | 3300006038 | Bacteria | 13976 |
| 13 | Ga0075365_10024520 | 3300006038 | Bacteria | 3807 |
| 14 | Ga0075365_10034062 | 3300006038 | Bacteria | 3287 |
| 15 | Ga0075365_10075038 | 3300006038 | Bacteria | 2281 |
| 16 | Ga0075368_10001618 | 3300006042 | Bacteria | 7226 |
| 17 | Ga0075368_10005420 | 3300006042 | Bacteria | 4384 |
| 18 | Ga0075368_10012914 | 3300006042 | Bacteria | 3061 |
| 19 | Ga0075363_100028703 | 3300006048 | Bacteria | 2865 |
| 20 | Ga0075363_100042937 | 3300006048 | Bacteria | 2390 |
| 21 | Ga0075364_10009945 | 3300006051 | Bacteria | 5723 |
| 22 | Ga0075367_10004197 | 3300006178 | Bacteria | 6992 |
| 23 | Ga0075367_10014319 | 3300006178 | Bacteria | 4292 |
| 24 | Ga0075367_10017418 | 3300006178 | Bacteria | 3944 |
| 25 | Ga0075430_100119906 | 3300006846 | Bacteria | 2193 |
| 26 | Ga0105245_10002649 | 3300009098 | Bacteria | 16111 |
| 27 | Ga0105239_10010117 | 3300010375 | Bacteria | 10570 |
| 28 | Ga0105239_10042028 | 3300010375 | Bacteria | 5008 |
| 29 | Ga0157369_10212991 | 3300013105 | Bacteria | 2024 |
| 30 | Ga0157372_10063105 | 3300013307 | Bacteria | 4153 |
| 31 | Ga0157372_10223055 | 3300013307 | Bacteria | 2185 |
| 32 | Ga0157375_10039918 | 3300013308 | Bacteria | 4520 |
| 33 | Ga0157375_10080254 | 3300013308 | Bacteria | 3300 |
| 34 | Ga0157375_10197753 | 3300013308 | Bacteria | 2165 |
| 35 | Ga0163161_10057210 | 3300017792 | Bacteria | 2833 |
| 36 | Ga0207657_10067636 | 3300025919 | Bacteria | 3037 |
| 37 | Ga0207687_10041077 | 3300025927 | Bacteria | 3174 |
| 38 | Ga0207687_10066826 | 3300025927 | Bacteria | 2556 |
| 39 | Ga0207691_10030300 | 3300025940 | Bacteria | 5057 |
| 40 | Ga0207679_10017072 | 3300025945 | Bacteria | 4831 |
| 41 | Ga0207678_10053638 | 3300026067 | Bacteria | 3474 |
| 42 | Ga0207702_10041454 | 3300026078 | Bacteria | 3861 |
| 43 | Ga0207674_10032940 | 3300026116 | Bacteria | 5431 |
| 44 | Ga0207675_100040642 | 3300026118 | Bacteria | 4343 |
| 45 | Ga0268264_10000251 | 3300028381 | Bacteria | 100745 |
| 46 | Ga0265338_10000887 | 3300028800 | Bacteria | 50439 |
| 47 | Ga0316575_10001893 | 3300031665 | Bacteria | 6904 |
| 48 | Ga0316576_10000222 | 3300031727 | Bacteria | 24230 |
| 49 | Ga0316576_10000562 | 3300031727 | Bacteria | 17501 |
| 50 | Ga0316577_10015724 | 3300031733 | Bacteria | 4163 |
| 51 | Ga0307409_100179916 | 3300031995 | Bacteria | 1871 |
| 52 | Ga0316583_10005665 | 3300032133 | Bacteria | 4491 |
| 53 | Ga0316588_1004613 | 3300033528 | Bacteria | 2623 |
| 54 | Ga0316574_0004189 | 3300035398 | Bacteria | 7518 |
| 55 | Ga0316584_0000247 | 3300036712 | Bacteria | 27169 |
| 56 | Ga0395900_0008748 | 3300037418 | Bacteria | 10401 |
| 57 | Ga0395900_0074878 | 3300037418 | Bacteria | 3480 |
| 58 | Ga0316581_0003367 | 3300037588 | Bacteria | 3974 |
| 59 | Ga0395901_0038653 | 3300038443 | Bacteria | 4936 |
| 60 | Ga0395901_0052275 | 3300038443 | Bacteria | 4246 |
| 61 | Ga0395901_0102440 | 3300038443 | Bacteria | 3005 |
| 62 | Ga0395901_0205154 | 3300038443 | Bacteria | 2065 |
| 63 | Ga0495606_0003172 | 3300046507 | Bacteria | 17763 |
| 64 | Ga0495668_0000523 | 3300046616 | Bacteria | 47819 |
| 65 | Ga0495625_0002256 | 3300046660 | Bacteria | 21190 |
| 66 | Ga0495626_0000106 | 3300048091 | Bacteria | 109700 |
| 67 | Ga0496100_0086383 | 3300048903 | Bacteria | 2131 |
| 68 | Ga0496101_0068353 | 3300048904 | Bacteria | 2597 |
| 69 | Ga0496102_0022365 | 3300048905 | Bacteria | 5602 |
| 70 | Ga0496103_0024594 | 3300048906 | Bacteria | 3636 |
| 71 | Ga0496107_0054681 | 3300048910 | Bacteria | 2881 |
| 72 | Ga0496108_0089983 | 3300048911 | Bacteria | 2609 |
| 73 | Ga0496109_0082500 | 3300048912 | Bacteria | 2963 |
| 74 | Ga0496109_0094432 | 3300048912 | Bacteria | 2768 |
| 75 | Ga0496109_0273236 | 3300048912 | Bacteria | 1592 |
| 76 | Ga0496110_0013915 | 3300048913 | Bacteria | 6665 |
| 77 | Ga0496110_0076246 | 3300048913 | Bacteria | 2981 |
| 78 | Ga0496111_0007990 | 3300048914 | Bacteria | 6976 |
| 79 | Ga0496111_0050407 | 3300048914 | Bacteria | 3003 |
| 80 | Ga0496113_0127777 | 3300048916 | Bacteria | 1992 |
| 81 | Ga0496114_0038237 | 3300048917 | Bacteria | 3970 |
| 82 | Ga0496114_0067427 | 3300048917 | Bacteria | 3002 |
| 83 | Ga0496114_0177798 | 3300048917 | Bacteria | 1857 |
| 84 | Ga0501031_0034657 | 3300049568 | Bacteria | 3294 |
| 85 | Ga0501034_0021674 | 3300049571 | Bacteria | 6546 |
| 86 | Ga0501034_0110371 | 3300049571 | Bacteria | 2742 |
| 87 | Ga0501036_0004191 | 3300049572 | Bacteria | 11619 |
| 88 | Ga0501036_0056804 | 3300049572 | Bacteria | 3316 |
| 89 | Ga0501037_0104855 | 3300049573 | Bacteria | 2038 |
| 90 | Ga0501038_0006590 | 3300049574 | Bacteria | 10738 |
| 91 | Ga0501039_0004913 | 3300049575 | Bacteria | 10127 |
| 92 | Ga0501041_0002598 | 3300049577 | Bacteria | 10302 |
| 93 | Ga0501043_0276264 | 3300049579 | Bacteria | 1289 |
| 94 | Ga0501046_0089796 | 3300049580 | Bacteria | 2364 |
| 95 | Ga0501070_0004002 | 3300049586 | Bacteria | 12665 |
| 96 | Ga0501070_0123142 | 3300049586 | Bacteria | 2143 |
| 97 | Ga0501071_0002182 | 3300049587 | Bacteria | 11771 |
| 98 | Ga0501072_0085117 | 3300049588 | Bacteria | 2507 |
| 99 | Ga0501072_0137018 | 3300049588 | Bacteria | 1951 |
| 100 | Ga0501073_0029151 | 3300049589 | Bacteria | 3944 |
| 101 | Ga0501073_0086855 | 3300049589 | Bacteria | 2175 |
| 102 | Ga0501075_0007608 | 3300049591 | Bacteria | 7517 |
| 103 | Ga0501076_0022230 | 3300049592 | Bacteria | 4872 |
| 104 | Ga0501077_0032319 | 3300049593 | Bacteria | 3331 |
| 105 | Ga0501079_0016472 | 3300049741 | Bacteria | 5644 |
| 106 | Ga0501080_0009305 | 3300049742 | Bacteria | 8959 |
| 107 | Ga0501080_0037535 | 3300049742 | Bacteria | 4526 |
| 108 | Ga0501083_0003652 | 3300049744 | Bacteria | 10796 |
| 109 | Ga0501035_0014784 | 3300049822 | Bacteria | 7207 |
| 110 | Ga0501035_0079125 | 3300049822 | Bacteria | 2904 |
| 111 | Ga0501045_0019540 | 3300049824 | Bacteria | 4831 |
| 112 | nmdc:mga03n38_24421_c1 | 3300050490 | Bacteria | 2471 |
| 113 | nmdc:mga00v17_20811_c1 | 3300050491 | Bacteria | 3763 |
| 114 | nmdc:mga00v17_2611_c1 | 3300050491 | Bacteria | 9242 |
| 115 | nmdc:mga0yw44_35887_c1 | 3300050492 | Bacteria | 2918 |
| 116 | nmdc:mga0yw44_52757_c1 | 3300050492 | Bacteria | 2466 |
| 117 | nmdc:mga0yw44_8853_c1 | 3300050492 | Bacteria | 5043 |
| 118 | nmdc:mga06z11_14937_c1 | 3300050494 | Bacteria | 3453 |
| 119 | nmdc:mga06z11_15105_c1 | 3300050494 | Bacteria | 3438 |
| 120 | nmdc:mga06z11_4885_c1 | 3300050494 | Bacteria | 5316 |
| 121 | nmdc:mga04h51_6713_c1 | 3300050495 | Bacteria | 3000 |
| 122 | nmdc:mga07m45_20184_c1 | 3300050496 | Bacteria | 3619 |
| 123 | nmdc:mga0qj67_43914_c1 | 3300050509 | Bacteria | 3520 |
| 124 | nmdc:mga08y16_260706_c1 | 3300050511 | Bacteria | 1790 |
| 125 | Ga0500644_0000156 | 3300053088 | Bacteria | 42766 |
| 126 | Ga0500593_000413 | 3300053117 | Bacteria | 16902 |
| 127 | Ga0500573_0026306 | 3300053140 | Bacteria | 3344 |
| 128 | Ga0501084_0004110 | 3300054114 | Bacteria | 11855 |
| 129 | Ga0501082_0011404 | 3300060353 | Bacteria | 7646 |
| 130 | Ga0530510_0000263 | 3300061734 | Bacteria | 33169 |
| 131 | 2501942018 | 2501939600 | Bacteria | 6907073 |
| 132 | 2515497175 | 2515154088 | Bacteria | 5526283 |
| 133 | 2515721515 | 2515154129 | Bacteria | 5584369 |
| 134 | 2515758630 | 2515154137 | Bacteria | 5711575 |
| 135 | 2516086170 | 2515154202 | Bacteria | 5471270 |
| 136 | 2516087978 | 2515154203 | Bacteria | 5458536 |
| 137 | 2623589257 | 2622736626 | Bacteria | 7181580 |
| 138 | 2643851810 | 2643221567 | Bacteria | 4163945 |
| 139 | 2643891365 | 2643221576 | Bacteria | 5214352 |
| 140 | 2643960413 | 2643221590 | Bacteria | 5214697 |
| 141 | 2644031810 | 2643221604 | Bacteria | 5014917 |
| 142 | 2644101874 | 2643221617 | Bacteria | 5139111 |
| 143 | 2644115936 | 2643221620 | Bacteria | 5134593 |
| 144 | 2644137601 | 2643221624 | Bacteria | 4384879 |
| 145 | 2772645159 | 2772190715 | Bacteria | 6959372 |
| 146 | 2812333048 | 2811994874 | Bacteria | 5367947 |
| 147 | 2831936948 | 2831935698 | Bacteria | 5963223 |
| 148 | 2832009188 | 2832004796 | Bacteria | 6538017 |
| 149 | 2855387181 | 2855386786 | Bacteria | 4752232 |
| 150 | 2855670407 | 2855670206 | Bacteria | 7120389 |
| 151 | 2855682670 | 2855676851 | Bacteria | 7063653 |
| 152 | 2855685394 | 2855683550 | Bacteria | 7134265 |
| 153 | 2856862878 | 2856858025 | Bacteria | 7255264 |
| 154 | 2857293381 | 2857288857 | Bacteria | 7189066 |
| 155 | 2858849153 | 2858848962 | Bacteria | 6963058 |
| 156 | 2858873045 | 2858868258 | Bacteria | 7683772 |
| 157 | 2858886890 | 2858882152 | Bacteria | 7230291 |
| 158 | 2858892392 | 2858888857 | Bacteria | 7060307 |
| 159 | 2858896004 | 2858895516 | Bacteria | 7378898 |
| 160 | 2858907158 | 2858902515 | Bacteria | 7086037 |
| 161 | 2866069203 | 2866065130 | Bacteria | 6518152 |
| 162 | 2867307345 | 2867302475 | Bacteria | 7087181 |
| 163 | 2867315335 | 2867312974 | Bacteria | 7058875 |
| 164 | 2867319667 | 2867319477 | Bacteria | 7069771 |
| 165 | 2867507260 | 2867507094 | Bacteria | 6506033 |
| 166 | 2869049614 | 2869048445 | Bacteria | 6875584 |
| 167 | 2869068198 | 2869061728 | Bacteria | 7112407 |
| 168 | 2869071615 | 2869068681 | Bacteria | 7205615 |
| 169 | 2880491278 | 2880489317 | Bacteria | 7096270 |
| 170 | 2880501192 | 2880495981 | Bacteria | 7340502 |
| 171 | 2887483236 | 2887478801 | Bacteria | 8972725 |
| 172 | 2902584951 | 2902582711 | Bacteria | 6187705 |
| 173 | 2919448738 | 2919446982 | Bacteria | 3994487 |
| 174 | 2929223272 | 2929219909 | Bacteria | 6984360 |
| 175 | 2929229696 | 2929226422 | Bacteria | 7248583 |
| 176 | 2996224119 | 2996221748 | Bacteria | 6799777 |
| 177 | 649815346 | 649633069 | Bacteria | 6962533 |
| 178 | 8003836624 | 8003830390 | Bacteria | 6541657 |
| 179 | 8003862799 | 8003856774 | Bacteria | 7675274 |
| 180 | 8003873086 | 8003870546 | Bacteria | 7396674 |
| 181 | 8054704670 | 8054704163 | Bacteria | 7247792 |
| 182 | 8054729341 | 8054727385 | Bacteria | 7558670 |
| 183 | 8054737553 | 8054734606 | Bacteria | 6947278 |
| 184 | 8055416703 | 8055412473 | Bacteria | 6257500 |
| 185 | Ga0075370_10090558 | |||
| 186 | Ga0006562J51391_1006541 | |||
| 187 | Ga0070683_100046227 | |||
| 188 | Ga0070683_100114993 | |||
| 189 | Ga0070659_100028769 | |||
| 190 | Ga0070667_100081391 | |||
| 191 | Ga0070663_100065971 | |||
| 192 | Ga0070684_100068988 | |||
| 193 | Ga0070665_100009099 | |||
| 194 | Ga0068857_100081071 | |||
| 195 | Ga0068860_100000417 | |||
| 196 | Ga0075365_10000624 | |||
| 197 | Ga0075365_10024520 | |||
| 198 | Ga0075365_10034062 | |||
| 199 | Ga0075365_10075038 | |||
| 200 | Ga0075368_10001618 | |||
| 201 | Ga0075368_10005420 | |||
| 202 | Ga0075368_10012914 | |||
| 203 | Ga0075363_100028703 | |||
| 204 | Ga0075363_100042937 | |||
| 205 | Ga0075364_10009945 | |||
| 206 | Ga0075367_10004197 | |||
| 207 | Ga0075367_10014319 | |||
| 208 | Ga0075367_10017418 | |||
| 209 | Ga0075430_100119906 | |||
| 210 | Ga0105245_10002649 | |||
| 211 | Ga0105239_10010117 | |||
| 212 | Ga0105239_10042028 | |||
| 213 | Ga0157369_10212991 | |||
| 214 | Ga0157372_10063105 | |||
| 215 | Ga0157372_10223055 | |||
| 216 | Ga0157375_10039918 | |||
| 217 | Ga0157375_10080254 | |||
| 218 | Ga0157375_10197753 | |||
| 219 | Ga0163161_10057210 | |||
| 220 | Ga0207657_10067636 | |||
| 221 | Ga0207687_10041077 | |||
| 222 | Ga0207687_10066826 | |||
| 223 | Ga0207691_10030300 | |||
| 224 | Ga0207679_10017072 | |||
| 225 | Ga0207678_10053638 | |||
| 226 | Ga0207702_10041454 | |||
| 227 | Ga0207674_10032940 | |||
| 228 | Ga0207675_100040642 | |||
| 229 | Ga0268264_10000251 | |||
| 230 | Ga0265338_10000887 | |||
| 231 | Ga0316575_10001893 | |||
| 232 | Ga0316576_10000222 | |||
| 233 | Ga0316576_10000562 | |||
| 234 | Ga0316577_10015724 | |||
| 235 | Ga0307409_100179916 | |||
| 236 | Ga0316583_10005665 | |||
| 237 | Ga0316588_1004613 | |||
| 238 | Ga0316574_0004189 | |||
| 239 | Ga0316584_0000247 | |||
| 240 | Ga0395900_0008748 | |||
| 241 | Ga0395900_0074878 | |||
| 242 | Ga0316581_0003367 | |||
| 243 | Ga0395901_0038653 | |||
| 244 | Ga0395901_0052275 | |||
| 245 | Ga0395901_0102440 | |||
| 246 | Ga0395901_0205154 | |||
| 247 | Ga0495606_0003172 | |||
| 248 | Ga0495668_0000523 | |||
| 249 | Ga0495625_0002256 | |||
| 250 | Ga0495626_0000106 | |||
| 251 | Ga0496100_0086383 | |||
| 252 | Ga0496101_0068353 | |||
| 253 | Ga0496102_0022365 | |||
| 254 | Ga0496103_0024594 | |||
| 255 | Ga0496107_0054681 | |||
| 256 | Ga0496108_0089983 | |||
| 257 | Ga0496109_0082500 | |||
| 258 | Ga0496109_0094432 | |||
| 259 | Ga0496109_0273236 | |||
| 260 | Ga0496110_0013915 | |||
| 261 | Ga0496110_0076246 | |||
| 262 | Ga0496111_0007990 | |||
| 263 | Ga0496111_0050407 | |||
| 264 | Ga0496113_0127777 | |||
| 265 | Ga0496114_0038237 | |||
| 266 | Ga0496114_0067427 | |||
| 267 | Ga0496114_0177798 | |||
| 268 | Ga0501031_0034657 | |||
| 269 | Ga0501034_0021674 | |||
| 270 | Ga0501034_0110371 | |||
| 271 | Ga0501036_0004191 | |||
| 272 | Ga0501036_0056804 | |||
| 273 | Ga0501037_0104855 | |||
| 274 | Ga0501038_0006590 | |||
| 275 | Ga0501039_0004913 | |||
| 276 | Ga0501041_0002598 | |||
| 277 | Ga0501043_0276264 | |||
| 278 | Ga0501046_0089796 | |||
| 279 | Ga0501070_0004002 | |||
| 280 | Ga0501070_0123142 | |||
| 281 | Ga0501071_0002182 | |||
| 282 | Ga0501072_0085117 | |||
| 283 | Ga0501072_0137018 | |||
| 284 | Ga0501073_0029151 | |||
| 285 | Ga0501073_0086855 | |||
| 286 | Ga0501075_0007608 | |||
| 287 | Ga0501076_0022230 | |||
| 288 | Ga0501077_0032319 | |||
| 289 | Ga0501079_0016472 | |||
| 290 | Ga0501080_0009305 | |||
| 291 | Ga0501080_0037535 | |||
| 292 | Ga0501083_0003652 | |||
| 293 | Ga0501035_0014784 | |||
| 294 | Ga0501035_0079125 | |||
| 295 | Ga0501045_0019540 | |||
| 296 | nmdc:mga03n38_24421_c1 | |||
| 297 | nmdc:mga00v17_20811_c1 | |||
| 298 | nmdc:mga00v17_2611_c1 | |||
| 299 | nmdc:mga0yw44_35887_c1 | |||
| 300 | nmdc:mga0yw44_52757_c1 | |||
| 301 | nmdc:mga0yw44_8853_c1 | |||
| 302 | nmdc:mga06z11_14937_c1 | |||
| 303 | nmdc:mga06z11_15105_c1 | |||
| 304 | nmdc:mga06z11_4885_c1 | |||
| 305 | nmdc:mga04h51_6713_c1 | |||
| 306 | nmdc:mga07m45_20184_c1 | |||
| 307 | nmdc:mga0qj67_43914_c1 | |||
| 308 | nmdc:mga08y16_260706_c1 | |||
| 309 | Ga0500644_0000156 | |||
| 310 | Ga0500593_000413 | |||
| 311 | Ga0500573_0026306 | |||
| 312 | Ga0501084_0004110 | |||
| 313 | Ga0501082_0011404 | |||
| 314 | Ga0530510_0000263 | |||
| 315 | 2501942018 | |||
| 316 | 2515497175 | |||
| 317 | 2515721515 | |||
| 318 | 2515758630 | |||
| 319 | 2516086170 | |||
| 320 | 2516087978 | |||
| 321 | 2623589257 | |||
| 322 | 2643851810 | |||
| 323 | 2643891365 | |||
| 324 | 2643960413 | |||
| 325 | 2644031810 | |||
| 326 | 2644101874 | |||
| 327 | 2644115936 | |||
| 328 | 2644137601 | |||
| 329 | 2772645159 | |||
| 330 | 2812333048 | |||
| 331 | 2831936948 | |||
| 332 | 2832009188 | |||
| 333 | 2855387181 | |||
| 334 | 2855670407 | |||
| 335 | 2855682670 | |||
| 336 | 2855685394 | |||
| 337 | 2856862878 | |||
| 338 | 2857293381 | |||
| 339 | 2858849153 | |||
| 340 | 2858873045 | |||
| 341 | 2858886890 | |||
| 342 | 2858892392 | |||
| 343 | 2858896004 | |||
| 344 | 2858907158 | |||
| 345 | 2866069203 | |||
| 346 | 2867307345 | |||
| 347 | 2867315335 | |||
| 348 | 2867319667 | |||
| 349 | 2867507260 | |||
| 350 | 2869049614 | |||
| 351 | 2869068198 | |||
| 352 | 2869071615 | |||
| 353 | 2880491278 | |||
| 354 | 2880501192 | |||
| 355 | 2887483236 | |||
| 356 | 2902584951 | |||
| 357 | 2919448738 | |||
| 358 | 2929223272 | |||
| 359 | 2929229696 | |||
| 360 | 2996224119 | |||
| 361 | 649815346 | |||
| 362 | 8003836624 | |||
| 363 | 8003862799 | |||
| 364 | 8003873086 | |||
| 365 | 8054704670 | |||
| 366 | 8054729341 | |||
| 367 | 8054737553 | |||
| 368 | 8055416703 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7nkz-assembly1.cif.gz_A | cryo-em structure of the cytochrome bd oxidase from m. tuberculosis at 2.5 a resolution | 0.9147 | 1 | 455 |
| 7ose-assembly1.cif.gz_D | cytochrome bd-ii type oxidase with bound aurachin d | 0.9146 | 1 | 455 |
| 7nkz-assembly1.cif.gz_A | cryo-em structure of the cytochrome bd oxidase from m. tuberculosis at 2.5 a resolution | 0.9109 | 1 | 455 |
| 5ir6-assembly1.cif.gz_A | the structure of bd oxidase from geobacillus thermodenitrificans | 0.9085 | 2 | 455 |
| 5ir6-assembly1.cif.gz_A | the structure of bd oxidase from geobacillus thermodenitrificans | 0.8965 | 2 | 455 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A286Y9S9_612_725_6.10.140.680 | Special;Helix non-globular;Helix Hairpins; | 0.7328 | 175 | 257 | 6.10.140.680 |
| af_A0A286Y9S9_612_725_6.10.140.680 | Special;Helix non-globular;Helix Hairpins; | 0.5443 | 175 | 257 | 6.10.140.680 |
| af_P32709_7_307_1.20.1630.10 | Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain | 0.4662 | 11 | 392 | 1.20.1630.10 |
| af_A0A1D6NFR3_201_388_1.20.120.1770 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); | 0.4567 | 3 | 146 | 1.20.120.1770 |
| af_P32709_7_307_1.20.1630.10 | Mainly Alpha;Up-down Bundle;Formate dehydrogenase/DMSO reductase fold;Formate dehydrogenase/DMSO reductase domain | 0.4527 | 11 | 392 | 1.20.1630.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6I3EEV5-F1-model_v4 | Cytochrome ubiquinol oxidase subunit I | 0.9586 | 1 | 265 |
GO:0005886
GO:0009055 GO:0016682 GO:0019646 GO:0020037 GO:0046872 GO:0070069 |
| AF-A0A454JD31-F1-model_v4 | Cytochrome bd-I ubiquinol oxidase subunit CydA | 0.9575 | 3 | 263 |
GO:0005886
GO:0009055 GO:0016682 GO:0019646 GO:0020037 GO:0046872 GO:0070069 |
| AF-K0VEX7-F1-model_v4 | Cytochrome bd-type quinol oxidase subunit 1 | 0.9566 | 1 | 208 |
GO:0005886
GO:0009055 GO:0016682 GO:0019646 GO:0020037 GO:0046872 GO:0070069 |
| AF-A0A376TID9-F1-model_v4 | Cytochrome d ubiquinol oxidase subunit 1 (EC 1.10.3.-) | 0.9551 | 1 | 257 |
GO:0005886
GO:0009055 GO:0016682 GO:0019646 GO:0020037 GO:0046872 GO:0070069 |
| AF-A0A2S5LWA7-F1-model_v4 | Cytochrome d terminal oxidase subunit 1 | 0.9545 | 2 | 267 |
GO:0005886
GO:0009055 GO:0016682 GO:0019646 GO:0020037 GO:0046872 GO:0070069 |