F282330

General Info

Members Datasets Scaffolds Average Seq Length
184 127 368 132

Family's Representative Sequence

Representative Sequence 3300006048|Ga0075363_100118233|Ga0075363_1001182332
Length 151
Sequence MLIATGCPVPGPDRPSTSLSAMRIPKQIYDELLAHAREDAPNECCGLVGGSDGVAKTVYRARNAEASPLRYNLDPQDQFRIMTEMDGKGEELSAIYHSHTASPAYPSQTDINLAAYPDALYLIVSLAEGEKDLRGYSIVDGEVNEVELQVG

Samples

Sample ID Description Type Environment
1 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
15 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
21 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
39 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
40 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
56 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
57 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
58 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
64 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
65 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
66 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
67 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
68 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
69 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
74 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
75 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
76 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
77 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
78 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
79 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
80 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
81 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
84 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
85 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
86 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
87 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
90 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
91 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
92 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
93 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
94 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
95 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
96 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
97 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
98 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
99 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
100 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
101 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
102 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
112 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
115 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
116 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
117 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
118 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
119 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
120 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
125 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
126 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
127 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.87
Nodule 0
Rhizoplane 10.33
Rhizosphere 77.72
Stem 0
Stem Tuber 0
Unclassified 17.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075363_100118233 3300006048 Bacteria 1478
2 JGI25407J50210_10159906 3300003373 Bacteria 555
3 Ga0070682_101467943 3300005337 Bacteria 585
4 Ga0070682_101819781 3300005337 Bacteria 532
5 Ga0070660_100758641 3300005339 Bacteria 815
6 Ga0070674_100098326 3300005356 Bacteria 2127
7 Ga0070713_100661838 3300005436 Unclassified 995
8 Ga0070663_100811297 3300005455 Bacteria 803
9 Ga0068867_100035888 3300005459 Bacteria 3598
10 Ga0070684_100209450 3300005535 Bacteria 1777
11 Ga0070684_101063985 3300005535 Bacteria 760
12 Ga0070695_100109959 3300005545 Bacteria 1869
13 Ga0070704_100106844 3300005549 Bacteria 2122
14 Ga0068856_100405453 3300005614 Bacteria 1383
15 Ga0068856_100912140 3300005614 Bacteria 897
16 Ga0068856_101894994 3300005614 Bacteria 607
17 Ga0068864_100000043 3300005618 Bacteria 162928
18 Ga0068866_10000645 3300005718 Bacteria 15809
19 Ga0068866_10784898 3300005718 Bacteria 661
20 Ga0068861_101324021 3300005719 Unclassified 701
21 Ga0068861_101710114 3300005719 Bacteria 622
22 Ga0068863_100694670 3300005841 Unclassified 1011
23 Ga0068858_100000046 3300005842 Bacteria 127519
24 Ga0081455_10017166 3300005937 Bacteria 6950
25 Ga0081455_10065681 3300005937 Bacteria 3033
26 Ga0081538_10027830 3300005981 Bacteria 3906
27 Ga0081538_10030685 3300005981 Bacteria 3643
28 Ga0081538_10176293 3300005981 Unclassified 923
29 Ga0081540_1000855 3300005983 Bacteria 27644
30 Ga0081539_10049459 3300005985 Bacteria 2385
31 Ga0081539_10120260 3300005985 Unclassified 1306
32 Ga0075365_10006907 3300006038 Bacteria 6300
33 Ga0075365_10983103 3300006038 Bacteria 595
34 Ga0075368_10038691 3300006042 Bacteria 1868
35 Ga0075363_100005961 3300006048 Bacteria 5494
36 Ga0075364_10022468 3300006051 Bacteria 3984
37 Ga0075364_10370640 3300006051 Bacteria 976
38 Ga0075364_10642487 3300006051 Unclassified 725
39 Ga0070712_100826034 3300006175 Bacteria 796
40 Ga0075367_10319174 3300006178 Bacteria 979
41 Ga0075434_100289825 3300006871 Bacteria 1657
42 Ga0111539_10627084 3300009094 Bacteria 1252
43 Ga0105245_10492240 3300009098 Bacteria 1241
44 Ga0105245_10672930 3300009098 Bacteria 1066
45 Ga0105245_10709943 3300009098 Bacteria 1039
46 Ga0105243_10094459 3300009148 Bacteria 2469
47 Ga0105243_11176036 3300009148 Unclassified 779
48 Ga0105249_10351346 3300009553 Bacteria 1494
49 Ga0105249_12305631 3300009553 Bacteria 611
50 Ga0105249_12643300 3300009553 Unclassified 574
51 Ga0105033_102896 3300009986 Bacteria 1430
52 Ga0105239_11349649 3300010375 Bacteria 823
53 Ga0105246_11068273 3300011119 Unclassified 735
54 Ga0157378_10069529 3300013297 Bacteria 3159
55 Ga0157378_10946507 3300013297 Bacteria 894
56 Ga0157375_12888235 3300013308 Bacteria 574
57 Ga0163163_10447107 3300014325 Bacteria 1352
58 Ga0157380_12883188 3300014326 Unclassified 547
59 Ga0163161_11042425 3300017792 Bacteria 700
60 Ga0207642_10000221 3300025899 Bacteria 16812
61 Ga0207642_10665700 3300025899 Unclassified 653
62 Ga0207688_10820547 3300025901 Bacteria 589
63 Ga0207657_10553210 3300025919 Bacteria 900
64 Ga0207659_11842072 3300025926 Bacteria 513
65 Ga0207687_10533117 3300025927 Bacteria 983
66 Ga0207686_10024972 3300025934 Bacteria 3470
67 Ga0207686_11132776 3300025934 Bacteria 639
68 Ga0207709_11278659 3300025935 Bacteria 606
69 Ga0207669_10000029 3300025937 Bacteria 88351
70 Ga0207669_10001752 3300025937 Bacteria 9218
71 Ga0207661_10172421 3300025944 Bacteria 1884
72 Ga0207679_10126054 3300025945 Bacteria 2046
73 Ga0207679_11031674 3300025945 Bacteria 754
74 Ga0207668_11544565 3300025972 Bacteria 599
75 Ga0207703_10001185 3300026035 Bacteria 24515
76 Ga0207702_10244934 3300026078 Bacteria 1681
77 Ga0207702_11888984 3300026078 Bacteria 588
78 Ga0207648_10078450 3300026089 Bacteria 2881
79 Ga0207676_10000042 3300026095 Bacteria 163475
80 Ga0209813_10087073 3300027866 Bacteria 1042
81 Ga0307511_10096872 3300030521 Bacteria 1962
82 Ga0316576_10558018 3300031727 Unclassified 839
83 Ga0316578_10205514 3300031728 Bacteria 1185
84 Ga0307410_10031430 3300031852 Bacteria 3407
85 Ga0307406_10795739 3300031901 Bacteria 797
86 Ga0307409_100366691 3300031995 Unclassified 1364
87 Ga0307416_100003818 3300032002 Bacteria 8951
88 Ga0373957_0184859 3300035120 Bacteria 865
89 Ga0316574_0228138 3300035398 Bacteria 1192
90 Ga0373927_0337983 3300035695 Bacteria 992
91 Ga0316584_0113420 3300036712 Bacteria 2028
92 Ga0395899_0453774 3300037312 Bacteria 839
93 Ga0395899_0652317 3300037312 Unclassified 665
94 Ga0395899_0683495 3300037312 Unclassified 645
95 Ga0395898_0083555 3300037466 Bacteria 3078
96 Ga0395898_0408095 3300037466 Bacteria 1295
97 Ga0395898_0532618 3300037466 Bacteria 1116
98 Ga0395898_0542158 3300037466 Bacteria 1105
99 Ga0395898_1675037 3300037466 Bacteria 559
100 Ga0395905_0289771 3300037471 Bacteria 1524
101 Ga0395905_0295877 3300037471 Unclassified 1506
102 Ga0395905_0628558 3300037471 Unclassified 976
103 Ga0395905_0698345 3300037471 Unclassified 917
104 Ga0395901_0382094 3300038443 Unclassified 1449
105 Ga0395901_0960628 3300038443 Unclassified 833
106 Ga0451853_0351733 3300041512 Bacteria 1333
107 Ga0466967_0890637 3300045976 Bacteria 885
108 Ga0495603_0003138 3300046455 Bacteria 9821
109 Ga0495603_0574921 3300046455 Unclassified 645
110 Ga0495629_0264467 3300046459 Bacteria 1182
111 Ga0495641_0001279 3300046461 Bacteria 21602
112 Ga0495653_0563702 3300046463 Bacteria 703
113 Ga0495605_0102872 3300046474 Bacteria 1311
114 Ga0495662_0080018 3300046476 Bacteria 1589
115 Ga0495596_0052540 3300046500 Bacteria 1595
116 Ga0495608_0633168 3300046511 Bacteria 640
117 Ga0495620_0036534 3300046515 Bacteria 2197
118 Ga0495628_0120326 3300046516 Bacteria 2015
119 Ga0495644_0009212 3300046523 Bacteria 3804
120 Ga0495640_0283164 3300046533 Bacteria 1032
121 Ga0495667_0378172 3300046559 Bacteria 893
122 Ga0495656_0002044 3300046615 Bacteria 6649
123 Ga0495656_0138608 3300046615 Bacteria 1164
124 Ga0495634_0453975 3300046642 Bacteria 756
125 Ga0495634_0592956 3300046642 Unclassified 644
126 Ga0495635_0510577 3300046663 Bacteria 791
127 Ga0495658_0204660 3300046683 Bacteria 1231
128 Ga0495658_0432207 3300046683 Bacteria 840
129 Ga0495600_0279139 3300046809 Bacteria 1058
130 Ga0495600_0431807 3300046809 Bacteria 816
131 Ga0495600_0520373 3300046809 Bacteria 729
132 Ga0495604_0042354 3300047317 Bacteria 3569
133 Ga0495676_0214766 3300047321 Unclassified 1329
134 Ga0495680_0488264 3300047322 Bacteria 838
135 Ga0495686_0000020 3300047472 Bacteria 429191
136 Ga0495686_0012176 3300047472 Bacteria 6030
137 Ga0495593_0362514 3300047673 Bacteria 724
138 Ga0495614_0056086 3300048089 Bacteria 1691
139 Ga0496102_1823393 3300048905 Unclassified 525
140 Ga0496103_0523624 3300048906 Bacteria 758
141 Ga0496104_0683134 3300048907 Bacteria 935
142 Ga0496105_0021799 3300048908 Bacteria 5186
143 Ga0496106_0097944 3300048909 Bacteria 2271
144 Ga0496107_0214539 3300048910 Bacteria 1431
145 Ga0496108_0005715 3300048911 Bacteria 10069
146 Ga0496109_0543700 3300048912 Bacteria 1096
147 Ga0496109_1701188 3300048912 Unclassified 564
148 Ga0496110_0479457 3300048913 Unclassified 1133
149 Ga0496111_0006437 3300048914 Bacteria 7625
150 Ga0496111_0136362 3300048914 Bacteria 1818
151 Ga0496111_1005323 3300048914 Unclassified 597
152 Ga0496112_0899691 3300048915 Unclassified 807
153 Ga0496112_1170175 3300048915 Bacteria 686
154 Ga0496112_1485531 3300048915 Bacteria 592
155 Ga0496112_1581302 3300048915 Bacteria 569
156 Ga0496113_0009718 3300048916 Bacteria 6321
157 Ga0496113_0070911 3300048916 Bacteria 2650
158 Ga0501036_0617409 3300049572 Unclassified 899
159 Ga0501039_0360480 3300049575 Unclassified 1142
160 Ga0501075_0515305 3300049591 Bacteria 913
161 Ga0501076_0072215 3300049592 Bacteria 2762
162 Ga0501080_0615627 3300049742 Bacteria 963
163 Ga0501081_0511476 3300049743 Bacteria 895
164 Ga0501045_0702955 3300049824 Bacteria 746
165 nmdc:mga00v17_381601_c1 3300050491 Unclassified 916
166 nmdc:mga00v17_419298_c1 3300050491 Bacteria 869
167 nmdc:mga00v17_5596_c1 3300050491 Bacteria 6624
168 nmdc:mga00v17_859316_c1 3300050491 Bacteria 576
169 nmdc:mga00v17_929207_c1 3300050491 Unclassified 550
170 nmdc:mga0yw44_64799_c1 3300050492 Bacteria 2250
171 nmdc:mga0yw44_671056_c1 3300050492 Bacteria 704
172 nmdc:mga06z11_451797_c1 3300050494 Bacteria 776
173 nmdc:mga05p37_582940_c1 3300050507 Bacteria 1266
174 nmdc:mga06r32_618012_c1 3300050510 Bacteria 1053
175 nmdc:mga08y16_488570_c1 3300050511 Bacteria 1252
176 nmdc:mga0n895_82535_c1 3300050512 Bacteria 3204
177 nmdc:mga0a205_4_c1 3300050515 Bacteria 168154
178 Ga0495595_0155044 3300053084 Bacteria 1128
179 Ga0495619_0000001 3300053085 Bacteria 586054
180 Ga0495619_0001750 3300053085 Bacteria 14429
181 Ga0495619_0002447 3300053085 Bacteria 12164
182 Ga0495619_0015207 3300053085 Bacteria 4865
183 Ga0500554_061079 3300053102 Unclassified 1209
184 Ga0500628_019477 3300053129 Bacteria 1351
185 Ga0075363_100118233
186 JGI25407J50210_10159906
187 Ga0070682_101467943
188 Ga0070682_101819781
189 Ga0070660_100758641
190 Ga0070674_100098326
191 Ga0070713_100661838
192 Ga0070663_100811297
193 Ga0068867_100035888
194 Ga0070684_100209450
195 Ga0070684_101063985
196 Ga0070695_100109959
197 Ga0070704_100106844
198 Ga0068856_100405453
199 Ga0068856_100912140
200 Ga0068856_101894994
201 Ga0068864_100000043
202 Ga0068866_10000645
203 Ga0068866_10784898
204 Ga0068861_101324021
205 Ga0068861_101710114
206 Ga0068863_100694670
207 Ga0068858_100000046
208 Ga0081455_10017166
209 Ga0081455_10065681
210 Ga0081538_10027830
211 Ga0081538_10030685
212 Ga0081538_10176293
213 Ga0081540_1000855
214 Ga0081539_10049459
215 Ga0081539_10120260
216 Ga0075365_10006907
217 Ga0075365_10983103
218 Ga0075368_10038691
219 Ga0075363_100005961
220 Ga0075364_10022468
221 Ga0075364_10370640
222 Ga0075364_10642487
223 Ga0070712_100826034
224 Ga0075367_10319174
225 Ga0075434_100289825
226 Ga0111539_10627084
227 Ga0105245_10492240
228 Ga0105245_10672930
229 Ga0105245_10709943
230 Ga0105243_10094459
231 Ga0105243_11176036
232 Ga0105249_10351346
233 Ga0105249_12305631
234 Ga0105249_12643300
235 Ga0105033_102896
236 Ga0105239_11349649
237 Ga0105246_11068273
238 Ga0157378_10069529
239 Ga0157378_10946507
240 Ga0157375_12888235
241 Ga0163163_10447107
242 Ga0157380_12883188
243 Ga0163161_11042425
244 Ga0207642_10000221
245 Ga0207642_10665700
246 Ga0207688_10820547
247 Ga0207657_10553210
248 Ga0207659_11842072
249 Ga0207687_10533117
250 Ga0207686_10024972
251 Ga0207686_11132776
252 Ga0207709_11278659
253 Ga0207669_10000029
254 Ga0207669_10001752
255 Ga0207661_10172421
256 Ga0207679_10126054
257 Ga0207679_11031674
258 Ga0207668_11544565
259 Ga0207703_10001185
260 Ga0207702_10244934
261 Ga0207702_11888984
262 Ga0207648_10078450
263 Ga0207676_10000042
264 Ga0209813_10087073
265 Ga0307511_10096872
266 Ga0316576_10558018
267 Ga0316578_10205514
268 Ga0307410_10031430
269 Ga0307406_10795739
270 Ga0307409_100366691
271 Ga0307416_100003818
272 Ga0373957_0184859
273 Ga0316574_0228138
274 Ga0373927_0337983
275 Ga0316584_0113420
276 Ga0395899_0453774
277 Ga0395899_0652317
278 Ga0395899_0683495
279 Ga0395898_0083555
280 Ga0395898_0408095
281 Ga0395898_0532618
282 Ga0395898_0542158
283 Ga0395898_1675037
284 Ga0395905_0289771
285 Ga0395905_0295877
286 Ga0395905_0628558
287 Ga0395905_0698345
288 Ga0395901_0382094
289 Ga0395901_0960628
290 Ga0451853_0351733
291 Ga0466967_0890637
292 Ga0495603_0003138
293 Ga0495603_0574921
294 Ga0495629_0264467
295 Ga0495641_0001279
296 Ga0495653_0563702
297 Ga0495605_0102872
298 Ga0495662_0080018
299 Ga0495596_0052540
300 Ga0495608_0633168
301 Ga0495620_0036534
302 Ga0495628_0120326
303 Ga0495644_0009212
304 Ga0495640_0283164
305 Ga0495667_0378172
306 Ga0495656_0002044
307 Ga0495656_0138608
308 Ga0495634_0453975
309 Ga0495634_0592956
310 Ga0495635_0510577
311 Ga0495658_0204660
312 Ga0495658_0432207
313 Ga0495600_0279139
314 Ga0495600_0431807
315 Ga0495600_0520373
316 Ga0495604_0042354
317 Ga0495676_0214766
318 Ga0495680_0488264
319 Ga0495686_0000020
320 Ga0495686_0012176
321 Ga0495593_0362514
322 Ga0495614_0056086
323 Ga0496102_1823393
324 Ga0496103_0523624
325 Ga0496104_0683134
326 Ga0496105_0021799
327 Ga0496106_0097944
328 Ga0496107_0214539
329 Ga0496108_0005715
330 Ga0496109_0543700
331 Ga0496109_1701188
332 Ga0496110_0479457
333 Ga0496111_0006437
334 Ga0496111_0136362
335 Ga0496111_1005323
336 Ga0496112_0899691
337 Ga0496112_1170175
338 Ga0496112_1485531
339 Ga0496112_1581302
340 Ga0496113_0009718
341 Ga0496113_0070911
342 Ga0501036_0617409
343 Ga0501039_0360480
344 Ga0501075_0515305
345 Ga0501076_0072215
346 Ga0501080_0615627
347 Ga0501081_0511476
348 Ga0501045_0702955
349 nmdc:mga00v17_381601_c1
350 nmdc:mga00v17_419298_c1
351 nmdc:mga00v17_5596_c1
352 nmdc:mga00v17_859316_c1
353 nmdc:mga00v17_929207_c1
354 nmdc:mga0yw44_64799_c1
355 nmdc:mga0yw44_671056_c1
356 nmdc:mga06z11_451797_c1
357 nmdc:mga05p37_582940_c1
358 nmdc:mga06r32_618012_c1
359 nmdc:mga08y16_488570_c1
360 nmdc:mga0n895_82535_c1
361 nmdc:mga0a205_4_c1
362 Ga0495595_0155044
363 Ga0495619_0000001
364 Ga0495619_0001750
365 Ga0495619_0002447
366 Ga0495619_0015207
367 Ga0500554_061079
368 Ga0500628_019477

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14464

Prok-JAB

Prokaryotic homologs of the JAB domain

25

138

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ld9-assembly1.cif.gz_A structure of deubiquitinating enzyme homolog, pyrococcus furiosus jamm1. 0.9245 2 120
5ld9-assembly1.cif.gz_B structure of deubiquitinating enzyme homolog, pyrococcus furiosus jamm1. 0.9151 2 120
2kks-assembly1.cif.gz_A solution structure of protein dsy2949 from desulfitobacterium hafniense. northeast structural genomics consortium target dhr27 0.8693 2 121
1oi0-assembly3.cif.gz_C crystal structure of af2198, a jab1/mpn domain protein from archaeoglobus fulgidus 0.843 2 127
1oi0-assembly2.cif.gz_B crystal structure of af2198, a jab1/mpn domain protein from archaeoglobus fulgidus 0.8374 2 127
ID Description Score Start End Superfamily
af_P9WHS1_10_146_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.942 2 126 3.40.140.10
af_P9WHS1_10_146_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9139 2 126 3.40.140.10
2kksA00 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.8693 2 121 3.40.140.10
af_Q54Z40_718_975_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.835 4 115 3.40.140.10
af_D4A7T9_558_703_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.8344 2 117 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A7V9AEA1-F1-model_v4 M67 family metallopeptidase 0.993 2 123 GO:0006508
GO:0008235
GO:0008270
AF-A0A532U8W9-F1-model_v4 MPN domain-containing protein 0.9892 6 126 GO:0006508
GO:0008235
GO:0008270
AF-A0A1M3BKG2-F1-model_v4 MPN domain-containing protein 0.9879 6 126 GO:0006508
GO:0008235
GO:0008270
AF-A0A4S1CHJ1-F1-model_v4 M67 family peptidase 0.9876 2 127 GO:0006508
GO:0008235
GO:0008270
AF-A0A2U3QIE0-F1-model_v4 Mov34/MPN/PAD-1 family 0.9875 2 120 GO:0006508
GO:0008235
GO:0008270

Map