F281712

General Info

Members Datasets Scaffolds Average Seq Length
183 172 366 412

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2980182181|2980182981
Length 447
Sequence VIQPGQSLYQLSQLYGVSVETITEANEISPKDALVVGQTLVIPIVGSYYWVKPGDTLTSIARQFGTTAQTLADVNGIPPEGTLATGTRLYIPPRPRRDAEFNAYVEPRGGSVSAELRRASREAAPHLTYLAPFSFRINRDGTLTPPPLDDLASIAAEQQAVLMMVVTNLENDQFSAELGQVILNVEQVQNRLLDTIIRTAHEHNFRDIHFDLEHLRPEDRGAYNRFLRKAADRIHNEGLLISTALAPKTSAEQTGAWYTAHDYKAHGEIADFVVIMTYEWGYSGGPPMPVSPIGPVRKVLEYAITEMPANKIMMGQNLYGYDWTLPYKPGGAYAKALSPQQAIALARKRNASIAYDEEAQAPHFAYWDDNGKEHRVWFEDARSIQAKFDLVKELGLRGVSYWKLGLSFPQNWLLIEDNFNVTKKQERRRIVRRTQPPSPKAPFQGRY

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
7 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
11 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
12 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
15 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
16 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
17 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
18 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
19 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
20 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
21 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
22 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
23 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
29 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
30 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
31 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
32 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
33 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
34 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
35 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
36 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
37 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
38 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
39 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
40 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
41 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
42 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
43 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
44 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
45 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
46 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
47 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
48 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
49 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
50 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
51 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
52 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
53 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
54 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
55 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
56 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
57 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
58 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
59 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
60 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
61 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
62 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
63 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
65 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
66 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
67 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
68 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
69 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
70 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
71 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
72 2554235283 Bacillus safensis VK Isolate Rhizosphere
73 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
74 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
75 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
76 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
77 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
78 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
79 2643221731 Bacillus sp. Root147 Isolate Unclassified
80 2643221732 Bacillus sp. Root239 Isolate Unclassified
81 2643221735 Bacillus sp. Root920 Isolate Unclassified
82 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
83 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
84 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
85 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
86 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
87 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
88 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
89 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
90 2738541295 Bacillus sp. OK085 Isolate Unclassified
91 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
92 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
93 2802429420 Priestia filamentosa HL2HP6 Isolate Unclassified
94 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
95 2811994870 Bacillus sp. JB4 Isolate Unclassified
96 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
97 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
98 2818991441 Niallia circulans 3243 Isolate Rhizosphere
99 2818991459 Paenibacillus sp. 597 Isolate Unclassified
100 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
101 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
102 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
103 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
104 2842682962 Bacillus sp. R-72492 Isolate Unclassified
105 2842882022 Bacillus sp. R-71893 Isolate Unclassified
106 2849139964 Bacillus sp. R-71875 Isolate Unclassified
107 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
108 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
109 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
110 2857581216 Bacillus sp. R-71922 Isolate Unclassified
111 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
112 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
113 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
114 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
115 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
116 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
117 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
118 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
119 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
120 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
121 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
122 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
123 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
124 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
125 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
126 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
127 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
128 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
129 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
130 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
131 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
132 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
133 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
134 2919720352 Priestia megaterium 4340 Isolate Unclassified
135 2919726948 Bacillus pumilus 4489 Isolate Unclassified
136 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
137 2929004312 Priestia megaterium 1104 Isolate Unclassified
138 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
139 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
140 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
141 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
142 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
143 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
144 2969141011 Bacillus velezensis MH25 Isolate Unclassified
145 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
146 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
147 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
148 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
149 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
150 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
151 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
152 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
153 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
154 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
155 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
156 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
157 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
158 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
159 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
160 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified
161 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
162 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
163 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
164 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
165 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
166 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
167 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
168 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
169 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
170 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
171 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere
172 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 39.34
Metatranscriptomes 1.64
Isolates 59.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.56
Nodule 1.09
Rhizoplane 9.29
Rhizosphere 46.45
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10001224 3300003187 Bacteria 18347
2 rootH1_10011021 3300003316 Bacteria 15615
3 rootL2_10077587 3300003322 Bacteria 10705
4 Ga0006562J51391_1000455 3300003578 Bacteria 14071
5 Ga0006562J51391_1007152 3300003578 Bacteria 3390
6 Ga0055532_1001400 3300003758 Bacteria 6796
7 Ga0055528_1003268 3300003790 Bacteria 8250
8 Ga0055541_1002435 3300003841 Bacteria 3723
9 Ga0070670_100086711 3300005331 Bacteria 2690
10 Ga0070665_100128837 3300005548 Bacteria 2533
11 Ga0105244_10054337 3300009036 Bacteria 2032
12 Ga0105245_10008585 3300009098 Bacteria 8909
13 Ga0105247_10040441 3300009101 Bacteria 2850
14 Ga0105243_10007077 3300009148 Bacteria 8624
15 Ga0105242_10014144 3300009176 Bacteria 6178
16 Ga0105239_10092681 3300010375 Bacteria 3335
17 Ga0105246_10005143 3300011119 Bacteria 7954
18 Ga0157371_10003191 3300013102 Bacteria 15052
19 Ga0157378_10020719 3300013297 Bacteria 5783
20 Ga0209566_100122 3300025225 Bacteria 101406
21 Ga0209147_100086 3300025229 Bacteria 182078
22 Ga0209147_102276 3300025229 Bacteria 5030
23 Ga0209147_103035 3300025229 Bacteria 3557
24 Ga0209673_1006013 3300025273 Bacteria 5968
25 Ga0209025_1002628 3300025294 Bacteria 18425
26 Ga0209025_1010521 3300025294 Bacteria 6257
27 Ga0209025_1046803 3300025294 Bacteria 1774
28 Ga0207696_1002864 3300025711 Bacteria 8143
29 Ga0207655_1032588 3300025728 Bacteria 2378
30 Ga0207713_1003390 3300025735 Bacteria 10900
31 Ga0207687_10097033 3300025927 Bacteria 2161
32 Ga0207709_10005545 3300025935 Bacteria 7152
33 Ga0209371_1013512 3300027312 Bacteria 2287
34 Ga0268256_1012672 3300030500 Bacteria 2593
35 Ga0307408_100088171 3300031548 Bacteria 2336
36 Ga0307409_100094836 3300031995 Bacteria 2456
37 Ga0307409_100169114 3300031995 Bacteria 1922
38 Ga0439449_0006910 3300042007 Bacteria 4327
39 Ga0439457_010551 3300042014 Bacteria 2121
40 Ga0466969_0009658 3300044656 Bacteria 5114
41 Ga0466961_0015332 3300044693 Bacteria 4921
42 Ga0466959_0011579 3300045049 Bacteria 6338
43 Ga0495590_0017339 3300046457 Bacteria 2593
44 Ga0495585_0007208 3300046492 Bacteria 6832
45 Ga0495637_0077044 3300046520 Bacteria 1335
46 Ga0495661_0089001 3300046665 Bacteria 1761
47 Ga0495660_0093907 3300046810 Bacteria 1554
48 Ga0495683_0003610 3300047323 Bacteria 8978
49 Ga0496100_0002146 3300048903 Bacteria 9920
50 Ga0496100_0013837 3300048903 Bacteria 4668
51 Ga0496101_0015846 3300048904 Bacteria 5087
52 Ga0496102_0007058 3300048905 Bacteria 9586
53 Ga0496103_0005502 3300048906 Bacteria 7576
54 Ga0496104_0006839 3300048907 Bacteria 10052
55 Ga0496105_0006053 3300048908 Bacteria 9253
56 Ga0496106_0001861 3300048909 Bacteria 15792
57 Ga0496107_0003952 3300048910 Bacteria 9971
58 Ga0496108_0003539 3300048911 Bacteria 12521
59 Ga0496108_0198293 3300048911 Bacteria 1741
60 Ga0496109_0012308 3300048912 Bacteria 7386
61 Ga0496110_0000516 3300048913 Bacteria 26257
62 Ga0496110_0027534 3300048913 Bacteria 4873
63 Ga0496111_0039061 3300048914 Bacteria 3401
64 Ga0496112_0068451 3300048915 Bacteria 3505
65 Ga0496113_0006440 3300048916 Bacteria 7442
66 Ga0496116_0007169 3300048919 Bacteria 9961
67 Ga0496116_0107978 3300048919 Bacteria 1644
68 Ga0496117_0015981 3300048920 Bacteria 6358
69 Ga0496119_0007342 3300048922 Bacteria 9965
70 Ga0496122_0003467 3300048925 Bacteria 20748
71 Ga0496122_0115674 3300048925 Bacteria 1746
72 Ga0496125_0004602 3300048928 Bacteria 15766
73 Ga0496126_0057864 3300048929 Bacteria 3497
74 Ga0501305_006355 3300049161 Bacteria 1465
75 Ga0501217_010010 3300049661 Bacteria 2071
76 2980182981 2980182181 Bacteria 9454109
77 2511178099 2510917027 Bacteria 5287437
78 2511697878 2511231119 Bacteria 4019861
79 2512641318 2512564013 Bacteria 6286191
80 2512729696 2512564039 Bacteria 8739048
81 2545559995 2545555800 Bacteria 4222588
82 2550899704 2548877040 Bacteria 7507281
83 2555471105 2554235283 Bacteria 3683090
84 2571532337 2571042143 Bacteria 6986194
85 2578931782 2576861599 Bacteria 4217202
86 2587742016 2585428059 Bacteria 8696589
87 2595319063 2593339198 Bacteria 7267884
88 2631982884 2630968484 Bacteria 3876276
89 2644422511 2643221676 Bacteria 8119172
90 2644720154 2643221731 Bacteria 5623886
91 2644724665 2643221732 Bacteria 5756404
92 2644740390 2643221735 Bacteria 3676263
93 2651531543 2648501850 Bacteria 3975476
94 2672338348 2671180330 Bacteria 5521719
95 2674421230 2671180844 Bacteria 4164150
96 2686995199 2684623153 Bacteria 3878815
97 2687496448 2687453109 Bacteria 3860091
98 2695629792 2695420354 Bacteria 3922431
99 2717914519 2716884898 Bacteria 3928789
100 2728531925 2728368933 Bacteria 7044283
101 2738817976 2738541295 Bacteria 5730091
102 2738841041 2738541299 Bacteria 4020721
103 2745167690 2744054657 Bacteria 5016802
104 2805348196 2802429420 Bacteria 845479
105 2808871054 2808606364 Bacteria 4465927
106 2812314335 2811994870 Bacteria 3776934
107 2816865720 2816332186 Bacteria 5331395
108 2817618988 2816332336 Bacteria 5207640
109 2819571602 2818991441 Bacteria 5062707
110 2819675325 2818991459 Bacteria 8736032
111 2819712236 2818991465 Bacteria 5388835
112 2819726180 2818991468 Bacteria 3723169
113 2823526287 2823526263 Bacteria 3765752
114 2831905780 2831905167 Bacteria 3319172
115 2842686314 2842682962 Bacteria 5589973
116 2842888543 2842882022 Bacteria 6158489
117 2849143188 2849139964 Bacteria 5613304
118 2857459858 2857453340 Bacteria 8090534
119 2857463743 2857460504 Bacteria 5194327
120 2857471345 2857465823 Bacteria 6772595
121 2857583523 2857581216 Bacteria 5522813
122 2857592480 2857591370 Bacteria 6569758
123 2857609388 2857604169 Bacteria 5111450
124 2857613751 2857609550 Bacteria 3753890
125 2865007212 2865002811 Bacteria 6333767
126 2877768672 2877768649 Bacteria 3957164
127 2880169615 2880169592 Bacteria 3900066
128 2881647335 2881644220 Bacteria 5302661
129 2888579510 2888578766 Bacteria 6743310
130 2889051867 2889049205 Bacteria 7524325
131 2897109638 2897109615 Bacteria 4009619
132 2898907921 2898907183 Bacteria 4067722
133 2904530426 2904524088 Bacteria 5887454
134 2904564622 2904560550 Bacteria 4029838
135 2904761627 2904755435 Bacteria 7986759
136 2908669364 2908665501 Bacteria 3678115
137 2915601734 2915597211 Bacteria 6475886
138 2915607684 2915606848 Bacteria 6032732
139 2916975353 2916971899 Bacteria 4250608
140 2919097126 2919093281 Bacteria 3660974
141 2919150276 2919143609 Bacteria 6219228
142 2919419822 2919414237 Bacteria 5429133
143 2919429958 2919425241 Bacteria 8055701
144 2919523488 2919517244 Bacteria 5858162
145 2919726829 2919720352 Bacteria 5986006
146 2919730795 2919726948 Bacteria 3696050
147 2928100302 2928093941 Bacteria 5965005
148 2929010454 2929004312 Bacteria 5678476
149 2929186845 2929183550 Bacteria 6377511
150 2936363573 2936361878 Bacteria 5632809
151 2954776206 2954773129 Bacteria 3741715
152 2960323627 2960319331 Bacteria 5502575
153 2960379357 2960375949 Bacteria 5361395
154 2964380312 2964375228 Bacteria 4909004
155 2969141035 2969141011 Bacteria 4118468
156 2971410042 2971403814 Bacteria 7370929
157 2971410788 2971410472 Bacteria 8311090
158 2971893399 2971893375 Bacteria 3929648
159 2977254820 2977254563 Bacteria 4828420
160 2980130596 2980125574 Bacteria 5567337
161 2988226723 2988225383 Bacteria 7221625
162 2990275818 2990275345 Bacteria 4887158
163 3001271997 3001267043 Bacteria 4823521
164 3001275817 3001272096 Bacteria 4729684
165 3001894191 3001892409 Bacteria 6328293
166 3006858384 3006858327 Bacteria 4317835
167 3006970046 3006969106 Bacteria 4739423
168 3006980139 3006978542 Bacteria 5328100
169 3006988463 3006984091 Bacteria 4207523
170 3006993330 3006988479 Bacteria 4767936
171 8007375624 8007371054 Bacteria 4849201
172 8022631770 8022630665 Bacteria 3886130
173 8022896569 8022893055 Bacteria 5300455
174 8022919340 8022914991 Bacteria 5584517
175 8022952796 8022948649 Bacteria 5366783
176 8051956627 8051952484 Bacteria 3926774
177 8052175173 8052174270 Bacteria 3881265
178 8054283483 8054280661 Bacteria 4232245
179 8054472098 8054465665 Bacteria 7323556
180 8054802617 8054795415 Bacteria 9785225
181 8056534760 8056533031 Bacteria 8964429
182 8057632153 8057632132 Bacteria 4726859
183 8057977434 8057977335 Bacteria 5694872
184 JGI25151J46595_10001224
185 rootH1_10011021
186 rootL2_10077587
187 Ga0006562J51391_1000455
188 Ga0006562J51391_1007152
189 Ga0055532_1001400
190 Ga0055528_1003268
191 Ga0055541_1002435
192 Ga0070670_100086711
193 Ga0070665_100128837
194 Ga0105244_10054337
195 Ga0105245_10008585
196 Ga0105247_10040441
197 Ga0105243_10007077
198 Ga0105242_10014144
199 Ga0105239_10092681
200 Ga0105246_10005143
201 Ga0157371_10003191
202 Ga0157378_10020719
203 Ga0209566_100122
204 Ga0209147_100086
205 Ga0209147_102276
206 Ga0209147_103035
207 Ga0209673_1006013
208 Ga0209025_1002628
209 Ga0209025_1010521
210 Ga0209025_1046803
211 Ga0207696_1002864
212 Ga0207655_1032588
213 Ga0207713_1003390
214 Ga0207687_10097033
215 Ga0207709_10005545
216 Ga0209371_1013512
217 Ga0268256_1012672
218 Ga0307408_100088171
219 Ga0307409_100094836
220 Ga0307409_100169114
221 Ga0439449_0006910
222 Ga0439457_010551
223 Ga0466969_0009658
224 Ga0466961_0015332
225 Ga0466959_0011579
226 Ga0495590_0017339
227 Ga0495585_0007208
228 Ga0495637_0077044
229 Ga0495661_0089001
230 Ga0495660_0093907
231 Ga0495683_0003610
232 Ga0496100_0002146
233 Ga0496100_0013837
234 Ga0496101_0015846
235 Ga0496102_0007058
236 Ga0496103_0005502
237 Ga0496104_0006839
238 Ga0496105_0006053
239 Ga0496106_0001861
240 Ga0496107_0003952
241 Ga0496108_0003539
242 Ga0496108_0198293
243 Ga0496109_0012308
244 Ga0496110_0000516
245 Ga0496110_0027534
246 Ga0496111_0039061
247 Ga0496112_0068451
248 Ga0496113_0006440
249 Ga0496116_0007169
250 Ga0496116_0107978
251 Ga0496117_0015981
252 Ga0496119_0007342
253 Ga0496122_0003467
254 Ga0496122_0115674
255 Ga0496125_0004602
256 Ga0496126_0057864
257 Ga0501305_006355
258 Ga0501217_010010
259 2980182981
260 2511178099
261 2511697878
262 2512641318
263 2512729696
264 2545559995
265 2550899704
266 2555471105
267 2571532337
268 2578931782
269 2587742016
270 2595319063
271 2631982884
272 2644422511
273 2644720154
274 2644724665
275 2644740390
276 2651531543
277 2672338348
278 2674421230
279 2686995199
280 2687496448
281 2695629792
282 2717914519
283 2728531925
284 2738817976
285 2738841041
286 2745167690
287 2805348196
288 2808871054
289 2812314335
290 2816865720
291 2817618988
292 2819571602
293 2819675325
294 2819712236
295 2819726180
296 2823526287
297 2831905780
298 2842686314
299 2842888543
300 2849143188
301 2857459858
302 2857463743
303 2857471345
304 2857583523
305 2857592480
306 2857609388
307 2857613751
308 2865007212
309 2877768672
310 2880169615
311 2881647335
312 2888579510
313 2889051867
314 2897109638
315 2898907921
316 2904530426
317 2904564622
318 2904761627
319 2908669364
320 2915601734
321 2915607684
322 2916975353
323 2919097126
324 2919150276
325 2919419822
326 2919429958
327 2919523488
328 2919726829
329 2919730795
330 2928100302
331 2929010454
332 2929186845
333 2936363573
334 2954776206
335 2960323627
336 2960379357
337 2964380312
338 2969141035
339 2971410042
340 2971410788
341 2971893399
342 2977254820
343 2980130596
344 2988226723
345 2990275818
346 3001271997
347 3001275817
348 3001894191
349 3006858384
350 3006970046
351 3006980139
352 3006988463
353 3006993330
354 8007375624
355 8022631770
356 8022896569
357 8022919340
358 8022952796
359 8051956627
360 8052175173
361 8054283483
362 8054472098
363 8054802617
364 8056534760
365 8057632153
366 8057977434

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01476

LysM

LysM domain

1

43

0.98

PF01476

LysM

LysM domain

49

92

0.97

PF00704

Glyco_hydro_18

Glycosyl hydrolases family 18

113

406

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
4s3k-assembly1.cif.gz_A crystal structure of the bacillus megaterium qm b1551 spore cortex-lytic enzyme slel 0.9717 3 383
4s3j-assembly2.cif.gz_B crystal structure of the bacillus cereus spore cortex-lytic enzyme slel 0.9629 1 385
4s3j-assembly2.cif.gz_B crystal structure of the bacillus cereus spore cortex-lytic enzyme slel 0.9605 1 385
4s3k-assembly1.cif.gz_A crystal structure of the bacillus megaterium qm b1551 spore cortex-lytic enzyme slel 0.9592 3 383
4s3j-assembly1.cif.gz_A crystal structure of the bacillus cereus spore cortex-lytic enzyme slel 0.9539 1 383
ID Description Score Start End Superfamily
4s3jB03 Alpha Beta;Roll;Chitinase A; domain 3; 1.004 277 336 3.10.50.10
4s3jB03 Alpha Beta;Roll;Chitinase A; domain 3; 0.9873 277 336 3.10.50.10
4s3kA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9793 54 383 3.20.20.80
4s3kA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9757 54 383 3.20.20.80
4s3jC02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9683 54 383 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A6A7KAB3-F1-model_v4 GH18 domain-containing protein 0.9957 246 381 GO:0005975
GO:0012505
GO:0070492
AF-A0A417YHD6-F1-model_v4 LysM peptidoglycan-binding domain-containing protein 0.9924 4 381 GO:0005975
GO:0008061
GO:0012505
GO:0016798
GO:0070492
AF-W4RUN0-F1-model_v4 Spore cortex-lytic enzyme 0.9924 96 382 GO:0005975
GO:0008061
GO:0012505
GO:0016798
GO:0070492
AF-A0A645CRG0-F1-model_v4 Spore germination protein YaaH 0.9911 200 382 GO:0005975
GO:0012505
GO:0070492
AF-A0A3C2CUJ4-F1-model_v4 Spore gernimation protein 0.9897 140 382 GO:0005975
GO:0008061
GO:0012505
GO:0016798
GO:0070492

Map