F281399

General Info

Members Datasets Scaffolds Average Seq Length
183 131 366 663

Family's Representative Sequence

Representative Sequence 3300046683|Ga0495658_0002996|Ga0495658_0002996_3580_5976
Length 770
Sequence MKKPLLAVAWILVALLGVWAYVTLALHRGEPLNSIYILMAALCSYAIGYRFYSKWVAARVLMLNDRRATPCEVREDGKDFVRTNKWIVFGHHFAAISGPGPLVGPVLAAQFGYLPGALWILIGVVLGGAVQDFVILFCSMRRNGKSLGQMVKEELNSTAGAKALAESPWGVFTVAATIPIAMLMGGYLRFWRVGKVLEVSTIGVVLLLLAVWGGKYIYRDATLSPLFTLSAKTLAWSIVAYGLAASVLPVWLLLAPRDYLSTFMKLGTIFALAVGVFVVRPDLKMPALSRFVDGSGLVFAGKLFPFCFITIACGAISGFHSLISSGITPKIITRETYSRPVGYGAMCLESLVAIMALIAACTLDPGVYFSMNMKGEPAATVRKVSDLNFPVTVEQMEDLAHTIGEKSLFDRTGGAATLAVGMTHIFAKLTGGRWLDHWYHFAIMFEALFILTTLDAGTRVGRYLLQDVLGSLWPALGETRSIPANVLASLLVVAGWGYFLIQGVADPDGGINSLWPLFGIANQLLASIALCLATTIILKMHLQPGSSEGASERPAIRRRPALALITLVPLAWLLAVTMTAGVQKIFYPAPIGFLAQARALEDKLPELRAKVESARAAASALKDLGKNRAQHFNNLLDAVVAGVFLVLVLGIVLLSASEWLLLLSRRRPANLHESPEVLLPGYAVGERKGVGALGVVAVLVGLARELSDEAALERAQSTAEACACAGNCSAPGAPGVNLLGAGRPDLPEPSAGQRYEQVVAHRRAGGHRCC

Samples

Sample ID Description Type Environment
1 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
74 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
75 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
78 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
79 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
83 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
84 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
85 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
86 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
96 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
99 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
100 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
101 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
102 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
105 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
106 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
107 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
108 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
111 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
112 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
119 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
120 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
121 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
126 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
127 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
128 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
129 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
130 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
131 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.27
Metatranscriptomes 0
Isolates 2.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.09
Nodule 0
Rhizoplane 6.56
Rhizosphere 88.52
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495658_0002996 3300046683 Bacteria 8449
2 JGI25406J46586_10000001 3300003203 Bacteria 251772
3 Ga0065707_10117923 3300005295 Bacteria 2199
4 Ga0070676_10009295 3300005328 Bacteria 5314
5 Ga0070666_10005845 3300005335 Bacteria 7556
6 Ga0070661_100008396 3300005344 Bacteria 7137
7 Ga0070661_100051030 3300005344 Bacteria 3027
8 Ga0070668_100007044 3300005347 Bacteria 8332
9 Ga0070669_100013407 3300005353 Bacteria 5829
10 Ga0070669_100076275 3300005353 Bacteria 2488
11 Ga0070675_100010688 3300005354 Bacteria 7178
12 Ga0070675_100035224 3300005354 Bacteria 4066
13 Ga0070671_100027859 3300005355 Bacteria 4651
14 Ga0070671_100038431 3300005355 Bacteria 3973
15 Ga0070673_100071601 3300005364 Bacteria 2786
16 Ga0070688_100005927 3300005365 Bacteria 6474
17 Ga0070667_100015997 3300005367 Bacteria 6206
18 Ga0070713_100048971 3300005436 Bacteria 3483
19 Ga0070711_100000780 3300005439 Bacteria 16640
20 Ga0070711_100002460 3300005439 Bacteria 10564
21 Ga0070708_100047107 3300005445 Bacteria 3807
22 Ga0070708_100105902 3300005445 Bacteria 2581
23 Ga0070708_100127174 3300005445 Bacteria 2356
24 Ga0070706_100001030 3300005467 Bacteria 30237
25 Ga0070706_100004798 3300005467 Bacteria 12957
26 Ga0070706_100006354 3300005467 Bacteria 11165
27 Ga0070706_100033175 3300005467 Bacteria 4765
28 Ga0070707_100000765 3300005468 Bacteria 31778
29 Ga0070698_100003272 3300005471 Bacteria 17792
30 Ga0070679_100020617 3300005530 Bacteria 6428
31 Ga0070697_100002274 3300005536 Bacteria 14745
32 Ga0070697_100008306 3300005536 Bacteria 8101
33 Ga0070697_100013952 3300005536 Bacteria 6309
34 Ga0070672_100002180 3300005543 Bacteria 12359
35 Ga0070686_100001264 3300005544 Bacteria 14334
36 Ga0070665_100033613 3300005548 Bacteria 5160
37 Ga0070704_100041522 3300005549 Bacteria 3175
38 Ga0068855_100090631 3300005563 Bacteria 3528
39 Ga0068859_100062167 3300005617 Bacteria 3764
40 Ga0068863_100022592 3300005841 Bacteria 6007
41 Ga0068860_100000117 3300005843 Bacteria 128043
42 Ga0068860_100011843 3300005843 Bacteria 8597
43 Ga0068860_100041101 3300005843 Bacteria 4417
44 Ga0068862_100059544 3300005844 Bacteria 3280
45 Ga0081540_1000775 3300005983 Bacteria 29325
46 Ga0081539_10000014 3300005985 Bacteria 411270
47 Ga0081539_10001350 3300005985 Bacteria 42708
48 Ga0070717_10000397 3300006028 Bacteria 27886
49 Ga0070717_10053687 3300006028 Bacteria 3322
50 Ga0075364_10033454 3300006051 Bacteria 3311
51 Ga0068871_100013787 3300006358 Bacteria 6010
52 Ga0097620_100062167 3300006931 Bacteria 3764
53 Ga0105240_10000022 3300009093 Bacteria 387911
54 Ga0105245_10026863 3300009098 Bacteria 5069
55 Ga0105241_10062176 3300009174 Bacteria 2878
56 Ga0105242_10028104 3300009176 Bacteria 4474
57 Ga0105242_10111464 3300009176 Bacteria 2333
58 Ga0105249_10005290 3300009553 Bacteria 11143
59 Ga0105239_10003687 3300010375 Bacteria 18666
60 Ga0157370_10044366 3300013104 Bacteria 4274
61 Ga0157369_10000176 3300013105 Bacteria 89387
62 Ga0157369_10058530 3300013105 Bacteria 4157
63 Ga0157374_10019785 3300013296 Bacteria 5965
64 Ga0157374_10027273 3300013296 Bacteria 5149
65 Ga0157378_10020114 3300013297 Bacteria 5870
66 Ga0157378_10035209 3300013297 Bacteria 4428
67 Ga0163162_10021457 3300013306 Bacteria 6361
68 Ga0163162_10033725 3300013306 Bacteria 5088
69 Ga0163162_10051231 3300013306 Bacteria 4142
70 Ga0163162_10062049 3300013306 Bacteria 3777
71 Ga0163162_10088281 3300013306 Bacteria 3180
72 Ga0163163_10000153 3300014325 Bacteria 71877
73 Ga0163163_10000300 3300014325 Bacteria 48781
74 Ga0207697_10001915 3300025315 Bacteria 11074
75 Ga0207697_10002015 3300025315 Bacteria 10753
76 Ga0207697_10003941 3300025315 Bacteria 7219
77 Ga0207688_10002265 3300025901 Bacteria 10355
78 Ga0207699_10023325 3300025906 Bacteria 3367
79 Ga0207645_10002935 3300025907 Bacteria 13183
80 Ga0207684_10000751 3300025910 Bacteria 37862
81 Ga0207684_10020085 3300025910 Bacteria 5706
82 Ga0207684_10048502 3300025910 Bacteria 3601
83 Ga0207684_10051408 3300025910 Bacteria 3496
84 Ga0207684_10099538 3300025910 Bacteria 2483
85 Ga0207707_10083720 3300025912 Bacteria 2785
86 Ga0207695_10000022 3300025913 Bacteria 659090
87 Ga0207693_10000682 3300025915 Bacteria 30507
88 Ga0207663_10056957 3300025916 Bacteria 2461
89 Ga0207652_10041057 3300025921 Bacteria 3931
90 Ga0207646_10006502 3300025922 Bacteria 12066
91 Ga0207646_10012204 3300025922 Bacteria 8267
92 Ga0207681_10015480 3300025923 Bacteria 4757
93 Ga0207659_10011624 3300025926 Bacteria 5569
94 Ga0207700_10041893 3300025928 Bacteria 3353
95 Ga0207644_10025231 3300025931 Bacteria 4087
96 Ga0207706_10003209 3300025933 Bacteria 15700
97 Ga0207665_10037659 3300025939 Bacteria 3219
98 Ga0207691_10001559 3300025940 Bacteria 22752
99 Ga0207691_10009247 3300025940 Bacteria 9456
100 Ga0207691_10044381 3300025940 Bacteria 4093
101 Ga0207668_10016086 3300025972 Bacteria 4661
102 Ga0207658_10020756 3300025986 Bacteria 4551
103 Ga0207702_10056936 3300026078 Bacteria 3320
104 Ga0207702_10128424 3300026078 Bacteria 2278
105 Ga0207648_10016125 3300026089 Bacteria 6841
106 Ga0207683_10021193 3300026121 Bacteria 5561
107 Ga0268264_10000163 3300028381 Bacteria 148007
108 Ga0316177_1049010 3300030731 Bacteria 7391
109 Ga0265328_10000282 3300031239 Bacteria 23767
110 Ga0265328_10017020 3300031239 Bacteria 2821
111 Ga0265331_10000057 3300031250 Bacteria 175827
112 Ga0307408_100012018 3300031548 Bacteria 5732
113 Ga0265314_10000170 3300031711 Bacteria 96635
114 Ga0265314_10012452 3300031711 Bacteria 6940
115 Ga0307405_10001806 3300031731 Bacteria 9158
116 Ga0307406_10001864 3300031901 Bacteria 11503
117 Ga0307409_100002699 3300031995 Bacteria 9359
118 Ga0307416_100014679 3300032002 Bacteria 5381
119 Ga0307416_100048987 3300032002 Bacteria 3356
120 Ga0373923_0019470 3300035111 Bacteria 2629
121 Ga0373945_0015374 3300035116 Bacteria 2574
122 Ga0373943_0005725 3300035170 Bacteria 5577
123 Ga0373946_0019113 3300035171 Bacteria 2637
124 Ga0373924_0000171 3300035410 Bacteria 19132
125 Ga0373935_0005608 3300035692 Bacteria 7403
126 Ga0373927_0016273 3300035695 Bacteria 4907
127 Ga0373947_0019685 3300035725 Bacteria 3892
128 Ga0373937_0000559 3300036401 Bacteria 33006
129 Ga0373937_0005058 3300036401 Bacteria 11227
130 Ga0373937_0021341 3300036401 Bacteria 5813
131 Ga0373937_0110595 3300036401 Bacteria 2555
132 Ga0373925_0013385 3300037068 Bacteria 5936
133 Ga0373925_0013605 3300037068 Bacteria 5891
134 Ga0395905_0045301 3300037471 Bacteria 4126
135 Ga0436364_0311100 3300037853 Bacteria 15423
136 Ga0436365_0969666 3300039437 Bacteria 15044
137 Ga0436362_0252857 3300039453 Bacteria 3557
138 Ga0451806_111244 3300041462 Bacteria 4891
139 Ga0451577_0000352 3300042876 Bacteria 85624
140 Ga0451577_0055285 3300042876 Bacteria 3542
141 Ga0466957_0000090 3300044842 Bacteria 36441
142 Ga0451576_0000098 3300045051 Bacteria 220454
143 Ga0451576_0007473 3300045051 Bacteria 13040
144 Ga0451576_0027208 3300045051 Bacteria 6144
145 Ga0451576_0058168 3300045051 Bacteria 4041
146 Ga0466958_0037347 3300045836 Bacteria 2910
147 Ga0495592_0057493 3300046454 Bacteria 2871
148 Ga0495639_0027693 3300046475 Bacteria 2509
149 Ga0495585_0000218 3300046492 Bacteria 59582
150 Ga0495630_0019568 3300046517 Bacteria 4978
151 Ga0495642_0008304 3300046528 Bacteria 3972
152 Ga0495652_0019975 3300046529 Bacteria 5958
153 Ga0495669_0003703 3300046684 Bacteria 6291
154 Ga0495581_0019392 3300047315 Bacteria 3948
155 Ga0495604_0042956 3300047317 Bacteria 3541
156 Ga0495604_0079574 3300047317 Bacteria 2458
157 Ga0495683_0000046 3300047323 Bacteria 129843
158 Ga0495684_0042052 3300047471 Bacteria 3501
159 Ga0496102_0030045 3300048905 Bacteria 4863
160 Ga0496104_0006203 3300048907 Bacteria 10502
161 Ga0496104_0027146 3300048907 Bacteria 5296
162 Ga0496104_0046082 3300048907 Bacteria 4104
163 Ga0496110_0038790 3300048913 Bacteria 4146
164 Ga0496111_0003828 3300048914 Bacteria 9394
165 Ga0496111_0084583 3300048914 Bacteria 2319
166 Ga0496112_0022219 3300048915 Bacteria 6045
167 Ga0496112_0022826 3300048915 Bacteria 5970
168 Ga0496112_0151638 3300048915 Bacteria 2285
169 Ga0496113_0004084 3300048916 Bacteria 8894
170 Ga0496117_0026356 3300048920 Bacteria 4550
171 Ga0496122_0032190 3300048925 Bacteria 4342
172 Ga0496124_0014466 3300048927 Bacteria 7630
173 Ga0501031_0022274 3300049568 Bacteria 4128
174 Ga0501033_0018599 3300049570 Bacteria 5252
175 Ga0501083_0003400 3300049744 Bacteria 11138
176 Ga0501044_0002018 3300049823 Bacteria 23414
177 nmdc:mga00v17_891_c1 3300050491 Bacteria 16141
178 Ga0495601_0001879 3300053077 Bacteria 11721
179 2547371432 2547132103 Bacteria 5115736
180 2644455692 2643221681 Bacteria 3707866
181 2843695070 2843690924 Bacteria 5169057
182 2929207404 2929206907 Bacteria 5918291
183 8054284888 8054280661 Bacteria 4232245
184 Ga0495658_0002996
185 JGI25406J46586_10000001
186 Ga0065707_10117923
187 Ga0070676_10009295
188 Ga0070666_10005845
189 Ga0070661_100008396
190 Ga0070661_100051030
191 Ga0070668_100007044
192 Ga0070669_100013407
193 Ga0070669_100076275
194 Ga0070675_100010688
195 Ga0070675_100035224
196 Ga0070671_100027859
197 Ga0070671_100038431
198 Ga0070673_100071601
199 Ga0070688_100005927
200 Ga0070667_100015997
201 Ga0070713_100048971
202 Ga0070711_100000780
203 Ga0070711_100002460
204 Ga0070708_100047107
205 Ga0070708_100105902
206 Ga0070708_100127174
207 Ga0070706_100001030
208 Ga0070706_100004798
209 Ga0070706_100006354
210 Ga0070706_100033175
211 Ga0070707_100000765
212 Ga0070698_100003272
213 Ga0070679_100020617
214 Ga0070697_100002274
215 Ga0070697_100008306
216 Ga0070697_100013952
217 Ga0070672_100002180
218 Ga0070686_100001264
219 Ga0070665_100033613
220 Ga0070704_100041522
221 Ga0068855_100090631
222 Ga0068859_100062167
223 Ga0068863_100022592
224 Ga0068860_100000117
225 Ga0068860_100011843
226 Ga0068860_100041101
227 Ga0068862_100059544
228 Ga0081540_1000775
229 Ga0081539_10000014
230 Ga0081539_10001350
231 Ga0070717_10000397
232 Ga0070717_10053687
233 Ga0075364_10033454
234 Ga0068871_100013787
235 Ga0097620_100062167
236 Ga0105240_10000022
237 Ga0105245_10026863
238 Ga0105241_10062176
239 Ga0105242_10028104
240 Ga0105242_10111464
241 Ga0105249_10005290
242 Ga0105239_10003687
243 Ga0157370_10044366
244 Ga0157369_10000176
245 Ga0157369_10058530
246 Ga0157374_10019785
247 Ga0157374_10027273
248 Ga0157378_10020114
249 Ga0157378_10035209
250 Ga0163162_10021457
251 Ga0163162_10033725
252 Ga0163162_10051231
253 Ga0163162_10062049
254 Ga0163162_10088281
255 Ga0163163_10000153
256 Ga0163163_10000300
257 Ga0207697_10001915
258 Ga0207697_10002015
259 Ga0207697_10003941
260 Ga0207688_10002265
261 Ga0207699_10023325
262 Ga0207645_10002935
263 Ga0207684_10000751
264 Ga0207684_10020085
265 Ga0207684_10048502
266 Ga0207684_10051408
267 Ga0207684_10099538
268 Ga0207707_10083720
269 Ga0207695_10000022
270 Ga0207693_10000682
271 Ga0207663_10056957
272 Ga0207652_10041057
273 Ga0207646_10006502
274 Ga0207646_10012204
275 Ga0207681_10015480
276 Ga0207659_10011624
277 Ga0207700_10041893
278 Ga0207644_10025231
279 Ga0207706_10003209
280 Ga0207665_10037659
281 Ga0207691_10001559
282 Ga0207691_10009247
283 Ga0207691_10044381
284 Ga0207668_10016086
285 Ga0207658_10020756
286 Ga0207702_10056936
287 Ga0207702_10128424
288 Ga0207648_10016125
289 Ga0207683_10021193
290 Ga0268264_10000163
291 Ga0316177_1049010
292 Ga0265328_10000282
293 Ga0265328_10017020
294 Ga0265331_10000057
295 Ga0307408_100012018
296 Ga0265314_10000170
297 Ga0265314_10012452
298 Ga0307405_10001806
299 Ga0307406_10001864
300 Ga0307409_100002699
301 Ga0307416_100014679
302 Ga0307416_100048987
303 Ga0373923_0019470
304 Ga0373945_0015374
305 Ga0373943_0005725
306 Ga0373946_0019113
307 Ga0373924_0000171
308 Ga0373935_0005608
309 Ga0373927_0016273
310 Ga0373947_0019685
311 Ga0373937_0000559
312 Ga0373937_0005058
313 Ga0373937_0021341
314 Ga0373937_0110595
315 Ga0373925_0013385
316 Ga0373925_0013605
317 Ga0395905_0045301
318 Ga0436364_0311100
319 Ga0436365_0969666
320 Ga0436362_0252857
321 Ga0451806_111244
322 Ga0451577_0000352
323 Ga0451577_0055285
324 Ga0466957_0000090
325 Ga0451576_0000098
326 Ga0451576_0007473
327 Ga0451576_0027208
328 Ga0451576_0058168
329 Ga0466958_0037347
330 Ga0495592_0057493
331 Ga0495639_0027693
332 Ga0495585_0000218
333 Ga0495630_0019568
334 Ga0495642_0008304
335 Ga0495652_0019975
336 Ga0495669_0003703
337 Ga0495581_0019392
338 Ga0495604_0042956
339 Ga0495604_0079574
340 Ga0495683_0000046
341 Ga0495684_0042052
342 Ga0496102_0030045
343 Ga0496104_0006203
344 Ga0496104_0027146
345 Ga0496104_0046082
346 Ga0496110_0038790
347 Ga0496111_0003828
348 Ga0496111_0084583
349 Ga0496112_0022219
350 Ga0496112_0022826
351 Ga0496112_0151638
352 Ga0496113_0004084
353 Ga0496117_0026356
354 Ga0496122_0032190
355 Ga0496124_0014466
356 Ga0501031_0022274
357 Ga0501033_0018599
358 Ga0501083_0003400
359 Ga0501044_0002018
360 nmdc:mga00v17_891_c1
361 Ga0495601_0001879
362 2547371432
363 2644455692
364 2843695070
365 2929207404
366 8054284888

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02554

CstA

Carbon starvation protein CstA

33

164

0.98

PF02554

CstA

Carbon starvation protein CstA

160

580

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8e6l-assembly1.cif.gz_A x-ray structure of the deinococcus radiodurans nramp/mnth divalent transition metal transporter d296a mutant in an inward-open, manganese-bound state 0.5557 89 561
3gi8-assembly1.cif.gz_C crystal structure of apct k158a transporter bound to 7f11 monoclonal fab fragment 0.548 77 607
6c3i-assembly1.cif.gz_A crystal structure of the deinococcus radiodurans nramp/mnth divalent transition metal transporter g45r mutant in an inward occluded state 0.5453 83 561
8e6l-assembly1.cif.gz_A x-ray structure of the deinococcus radiodurans nramp/mnth divalent transition metal transporter d296a mutant in an inward-open, manganese-bound state 0.5414 89 561
8b70-assembly1.cif.gz_A kima from b. subtilis with nucleotide second-messenger c-di-amp bound 0.5408 84 649
ID Description Score Start End Superfamily
af_P0AAE2_5_456_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.636 87 607 1.20.1740.10
af_Q92367_68_515_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.6304 83 612 1.20.1740.10
af_Q92367_68_515_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.6256 83 612 1.20.1740.10
af_A1Z9M6_140_535_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.6155 82 560 1.20.1740.10
af_P39277_4_414_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.6141 82 561 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A2V6N8U1-F1-model_v4 Carbon starvation protein A 0.9672 219 659 GO:0005886
GO:0009267
AF-A0A2V6N8U1-F1-model_v4 Carbon starvation protein A 0.9651 219 659 GO:0005886
GO:0009267
AF-A0A429MK15-F1-model_v4 Carbon starvation protein A 0.9504 218 528 GO:0005886
GO:0009267
AF-A0A520GW07-F1-model_v4 Carbon starvation protein A 0.9464 247 582 GO:0005886
GO:0009267
AF-A0A7H4N4Z3-F1-model_v4 Carbon starvation protein A 0.9427 219 575 GO:0005886
GO:0009267

Map