F280786

General Info

Members Datasets Scaffolds Average Seq Length
183 123 367 187

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_10044754|Ga0105243_100447544
Length 204
Sequence LRSIRLVPTLRYTDLVSDGVSQLIARIDEAVTLRDPDAITQRIKQELQDAIRARTVELPARFHRLRPDSYARRLLHRNDALGYTAVVMTWGPGQRTPLHDHAGIWCVEGVVEGGMDVTQFDLIDDHAGPAAGGYRFEEKGRVHAAVGSAGSLIPPFEYHILANALDRPSITLHVYGGEMTSCHVFEPADGGRYVRRERALSYDD

Samples

Sample ID Description Type Environment
1 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
18 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
77 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
82 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
83 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
84 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
85 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
91 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
92 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
93 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
94 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
95 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
96 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
97 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
98 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
99 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
100 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
101 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
102 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
105 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
106 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
107 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
108 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
109 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
110 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
111 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
117 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
118 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
119 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
120 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
121 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
123 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.55
Rhizosphere 98.36
Stem 0
Stem Tuber 0
Unclassified 19.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105243_10044754 3300009148 Bacteria 3474
2 rootH1_10018236 3300003316 Bacteria 1314
3 rootH1_10031432 3300003316 Bacteria 2308
4 rootH1_10031432 3300003323 Bacteria 1392
5 Ga0065707_10115462 3300005295 Bacteria 2266
6 Ga0065707_10134361 3300005295 Bacteria 1866
7 Ga0068869_100459983 3300005334 Unclassified 1056
8 Ga0070689_100309094 3300005340 Bacteria 1318
9 Ga0070692_10628553 3300005345 Unclassified 714
10 Ga0070668_100020995 3300005347 Bacteria 4935
11 Ga0070669_100003633 3300005353 Bacteria 11127
12 Ga0070669_100028655 3300005353 Bacteria 4010
13 Ga0070669_100794755 3300005353 Bacteria 804
14 Ga0070674_100019535 3300005356 Bacteria 4306
15 Ga0070667_100024537 3300005367 Bacteria 5008
16 Ga0070714_100032630 3300005435 Bacteria 4348
17 Ga0070713_100088333 3300005436 Bacteria 2660
18 Ga0070701_10459075 3300005438 Unclassified 819
19 Ga0070701_10539735 3300005438 Unclassified 763
20 Ga0070694_100044349 3300005444 Bacteria 2976
21 Ga0070685_10387028 3300005466 Bacteria 965
22 Ga0070707_100013464 3300005468 Bacteria 7653
23 Ga0070707_101010555 3300005468 Unclassified 797
24 Ga0070698_100540794 3300005471 Bacteria 1104
25 Ga0070698_100719472 3300005471 Unclassified 941
26 Ga0070699_100044406 3300005518 Bacteria 3848
27 Ga0070699_100103633 3300005518 Bacteria 2495
28 Ga0070699_100469010 3300005518 Bacteria 1142
29 Ga0070697_100207258 3300005536 Bacteria 1668
30 Ga0070697_100220509 3300005536 Bacteria 1616
31 Ga0068853_100155856 3300005539 Unclassified 2058
32 Ga0070695_100002678 3300005545 Bacteria 10306
33 Ga0070696_100042379 3300005546 Bacteria 3147
34 Ga0070696_100501796 3300005546 Bacteria 965
35 Ga0070704_100088556 3300005549 Bacteria 2300
36 Ga0070704_100218621 3300005549 Bacteria 1548
37 Ga0070702_100658228 3300005615 Bacteria 793
38 Ga0068859_100008430 3300005617 Bacteria 10436
39 Ga0068859_100016228 3300005617 Bacteria 7481
40 Ga0068859_100828514 3300005617 Unclassified 1012
41 Ga0068861_100068672 3300005719 Bacteria 2739
42 Ga0068861_100073288 3300005719 Unclassified 2660
43 Ga0068861_100615722 3300005719 Bacteria 998
44 Ga0068861_101300992 3300005719 Bacteria 707
45 Ga0068863_100005047 3300005841 Bacteria 13015
46 Ga0068858_100332247 3300005842 Bacteria 1454
47 Ga0068858_100432395 3300005842 Unclassified 1267
48 Ga0068860_100218213 3300005843 Bacteria 1852
49 Ga0068860_100232237 3300005843 Bacteria 1793
50 Ga0068860_100263245 3300005843 Unclassified 1681
51 Ga0068862_100011594 3300005844 Bacteria 7273
52 Ga0068862_100512721 3300005844 Viruses 1140
53 Ga0081455_10012088 3300005937 Bacteria 8629
54 Ga0070717_10356366 3300006028 Bacteria 1309
55 Ga0070716_100061140 3300006173 Bacteria 2179
56 Ga0075428_100009750 3300006844 Bacteria 10672
57 Ga0075428_100099276 3300006844 Unclassified 3174
58 Ga0075428_100121332 3300006844 Bacteria 2846
59 Ga0075428_100205254 3300006844 Bacteria 2130
60 Ga0075433_10046879 3300006852 Bacteria 3759
61 Ga0075433_10066046 3300006852 Bacteria 3173
62 Ga0075433_10200365 3300006852 Bacteria 1775
63 Ga0075434_100166441 3300006871 Bacteria 2225
64 Ga0075434_100425367 3300006871 Bacteria 1349
65 Ga0075434_101004288 3300006871 Unclassified 848
66 Ga0068865_100642866 3300006881 Unclassified 901
67 Ga0097620_100008430 3300006931 Bacteria 10436
68 Ga0097620_100016228 3300006931 Bacteria 7481
69 Ga0097620_100828592 3300006931 Unclassified 1012
70 Ga0075435_100001485 3300007076 Bacteria 15073
71 Ga0075435_100281507 3300007076 Bacteria 1420
72 Ga0105240_10721239 3300009093 Bacteria 1086
73 Ga0111539_10015152 3300009094 Bacteria 9606
74 Ga0111539_10061569 3300009094 Bacteria 4446
75 Ga0111539_10630858 3300009094 Bacteria 1248
76 Ga0111539_10939910 3300009094 Unclassified 1005
77 Ga0105247_10070642 3300009101 Bacteria 2181
78 Ga0114129_10000263 3300009147 Bacteria 59355
79 Ga0114129_10001265 3300009147 Bacteria 33730
80 Ga0114129_10003980 3300009147 Bacteria 20868
81 Ga0114129_10110173 3300009147 Bacteria 3800
82 Ga0114129_10336513 3300009147 Bacteria 2003
83 Ga0114129_10357786 3300009147 Bacteria 1932
84 Ga0114129_10536117 3300009147 Unclassified 1524
85 Ga0105243_10488303 3300009148 Unclassified 1164
86 Ga0105248_10447783 3300009177 Unclassified 1455
87 Ga0105248_10908675 3300009177 Bacteria 994
88 Ga0105249_10225122 3300009553 Bacteria 1847
89 Ga0163162_10282220 3300013306 Bacteria 1793
90 Ga0163163_11166176 3300014325 Unclassified 833
91 Ga0157380_10168589 3300014326 Bacteria 1910
92 Ga0157380_10616339 3300014326 Bacteria 1076
93 Ga0157379_10399576 3300014968 Unclassified 1263
94 Ga0157376_10641646 3300014969 Bacteria 1061
95 Ga0207688_10271677 3300025901 Unclassified 1031
96 Ga0207680_10047340 3300025903 Bacteria 2548
97 Ga0207684_10265927 3300025910 Bacteria 1480
98 Ga0207695_10072756 3300025913 Bacteria 3505
99 Ga0207663_10555839 3300025916 Unclassified 898
100 Ga0207646_10132492 3300025922 Unclassified 2244
101 Ga0207646_10622577 3300025922 Bacteria 968
102 Ga0207681_10011839 3300025923 Bacteria 5367
103 Ga0207681_10040914 3300025923 Bacteria 3087
104 Ga0207681_10058392 3300025923 Bacteria 2641
105 Ga0207681_10927994 3300025923 Bacteria 729
106 Ga0207664_10073521 3300025929 Bacteria 2758
107 Ga0207644_10138846 3300025931 Bacteria 1869
108 Ga0207709_10022771 3300025935 Bacteria 3557
109 Ga0207669_10008960 3300025937 Bacteria 4732
110 Ga0207704_10152203 3300025938 Unclassified 1634
111 Ga0207691_10009587 3300025940 Bacteria 9294
112 Ga0207711_10348189 3300025941 Bacteria 1372
113 Ga0207689_10154656 3300025942 Unclassified 1890
114 Ga0207651_10193853 3300025960 Bacteria 1623
115 Ga0207668_10020899 3300025972 Bacteria 4168
116 Ga0207703_10292400 3300026035 Bacteria 1483
117 Ga0207703_10305432 3300026035 Bacteria 1452
118 Ga0207678_10581977 3300026067 Unclassified 981
119 Ga0207641_10001555 3300026088 Bacteria 22468
120 Ga0207675_100004608 3300026118 Bacteria 13285
121 Ga0207675_100431685 3300026118 Bacteria 1303
122 Ga0207428_10299276 3300027907 Unclassified 1191
123 Ga0268265_10003704 3300028380 Bacteria 10883
124 Ga0268264_10038023 3300028381 Bacteria 3970
125 Ga0268264_10169392 3300028381 Bacteria 1974
126 Ga0307413_10046310 3300031824 Bacteria 2585
127 Ga0307407_10000734 3300031903 Bacteria 10720
128 Ga0307409_100051095 3300031995 Bacteria 3161
129 Ga0307416_100045896 3300032002 Bacteria 3444
130 Ga0307411_10109752 3300032005 Bacteria 1971
131 Ga0307411_10367372 3300032005 Unclassified 1179
132 Ga0373956_0601038 3300035119 Bacteria 525
133 Ga0373942_0034448 3300035207 Bacteria 1355
134 Ga0373961_0048235 3300035241 Unclassified 1254
135 Ga0373962_0032176 3300035242 Bacteria 1442
136 Ga0373931_0000230 3300035691 Bacteria 23760
137 Ga0373937_0148280 3300036401 Bacteria 2197
138 Ga0453683_0024324 3300044673 Bacteria 3855
139 Ga0466963_0156528 3300044694 Bacteria 1584
140 Ga0466960_0019702 3300044901 Bacteria 2977
141 Ga0451576_0003970 3300045051 Bacteria 19691
142 Ga0466958_0369670 3300045836 Unclassified 924
143 Ga0466967_0946015 3300045976 Unclassified 857
144 Ga0495603_0467411 3300046455 Unclassified 722
145 Ga0495629_0000486 3300046459 Bacteria 33192
146 Ga0495582_0005067 3300046473 Bacteria 7380
147 Ga0495639_0045379 3300046475 Unclassified 1988
148 Ga0495662_0026098 3300046476 Bacteria 2822
149 Ga0495664_0453484 3300046477 Bacteria 768
150 Ga0495594_0006503 3300046499 Bacteria 6015
151 Ga0495594_0077970 3300046499 Bacteria 1849
152 Ga0495640_0055279 3300046533 Bacteria 2716
153 Ga0495622_0059249 3300046557 Bacteria 1773
154 Ga0495634_0007645 3300046642 Bacteria 8094
155 Ga0495634_0129795 3300046642 Bacteria 1608
156 Ga0495635_0000153 3300046663 Bacteria 41982
157 Ga0495647_0001055 3300046681 Bacteria 8391
158 Ga0495658_0000039 3300046683 Bacteria 65592
159 Ga0495613_0005320 3300046689 Bacteria 9671
160 Ga0495581_0000416 3300047315 Bacteria 21538
161 Ga0495676_0268233 3300047321 Bacteria 1159
162 Ga0495680_0000865 3300047322 Bacteria 33619
163 Ga0495680_0185079 3300047322 Bacteria 1501
164 Ga0495614_0000535 3300048089 Bacteria 15704
165 Ga0496108_0096856 3300048911 Bacteria 2514
166 Ga0501042_0901127 3300049578 Unclassified 644
167 Ga0501048_0467804 3300049582 Bacteria 903
168 Ga0501068_0387822 3300049584 Bacteria 900
169 Ga0501083_0003503 3300049744 Bacteria 10986
170 nmdc:mga05p37_15547_c1 3300050507 Bacteria 9147
171 nmdc:mga05p37_19599_c1 3300050507 Bacteria 8181
172 nmdc:mga05p37_24612_c1 3300050507 Bacteria 7319
173 nmdc:mga05p37_33433_c1 3300050507 Bacteria 6298
174 nmdc:mga05p37_373385_c1 3300050507 Bacteria 1673
175 nmdc:mga05p37_61815_c1 3300050507 Bacteria 4610
176 nmdc:mga08y16_340839_c1 3300050511 Bacteria 1541
177 nmdc:mga08y16_43135_c1 3300050511 Bacteria 4726
178 nmdc:mga0n895_419906_c1 3300050512 Bacteria 1352
179 nmdc:mga0rr50_760746_c1 3300050513 Bacteria 827
180 nmdc:mga0rr50_94248_c1 3300050513 Bacteria 2338
181 nmdc:mga08x19_79234_c1 3300050514 Bacteria 2154
182 nmdc:mga0a205_26937_c1 3300050515 Bacteria 5487
183 Ga0495619_0010131 3300053085 Bacteria 5936
184 Ga0501082_0125213 3300060353 Bacteria 2229
185 Ga0105243_10044754
186 rootH1_10018236
187 rootH1_10031432
188 Ga0065707_10115462
189 Ga0065707_10134361
190 Ga0068869_100459983
191 Ga0070689_100309094
192 Ga0070692_10628553
193 Ga0070668_100020995
194 Ga0070669_100003633
195 Ga0070669_100028655
196 Ga0070669_100794755
197 Ga0070674_100019535
198 Ga0070667_100024537
199 Ga0070714_100032630
200 Ga0070713_100088333
201 Ga0070701_10459075
202 Ga0070701_10539735
203 Ga0070694_100044349
204 Ga0070685_10387028
205 Ga0070707_100013464
206 Ga0070707_101010555
207 Ga0070698_100540794
208 Ga0070698_100719472
209 Ga0070699_100044406
210 Ga0070699_100103633
211 Ga0070699_100469010
212 Ga0070697_100207258
213 Ga0070697_100220509
214 Ga0068853_100155856
215 Ga0070695_100002678
216 Ga0070696_100042379
217 Ga0070696_100501796
218 Ga0070704_100088556
219 Ga0070704_100218621
220 Ga0070702_100658228
221 Ga0068859_100008430
222 Ga0068859_100016228
223 Ga0068859_100828514
224 Ga0068861_100068672
225 Ga0068861_100073288
226 Ga0068861_100615722
227 Ga0068861_101300992
228 Ga0068863_100005047
229 Ga0068858_100332247
230 Ga0068858_100432395
231 Ga0068860_100218213
232 Ga0068860_100232237
233 Ga0068860_100263245
234 Ga0068862_100011594
235 Ga0068862_100512721
236 Ga0081455_10012088
237 Ga0070717_10356366
238 Ga0070716_100061140
239 Ga0075428_100009750
240 Ga0075428_100099276
241 Ga0075428_100121332
242 Ga0075428_100205254
243 Ga0075433_10046879
244 Ga0075433_10066046
245 Ga0075433_10200365
246 Ga0075434_100166441
247 Ga0075434_100425367
248 Ga0075434_101004288
249 Ga0068865_100642866
250 Ga0097620_100008430
251 Ga0097620_100016228
252 Ga0097620_100828592
253 Ga0075435_100001485
254 Ga0075435_100281507
255 Ga0105240_10721239
256 Ga0111539_10015152
257 Ga0111539_10061569
258 Ga0111539_10630858
259 Ga0111539_10939910
260 Ga0105247_10070642
261 Ga0114129_10000263
262 Ga0114129_10001265
263 Ga0114129_10003980
264 Ga0114129_10110173
265 Ga0114129_10336513
266 Ga0114129_10357786
267 Ga0114129_10536117
268 Ga0105243_10488303
269 Ga0105248_10447783
270 Ga0105248_10908675
271 Ga0105249_10225122
272 Ga0163162_10282220
273 Ga0163163_11166176
274 Ga0157380_10168589
275 Ga0157380_10616339
276 Ga0157379_10399576
277 Ga0157376_10641646
278 Ga0207688_10271677
279 Ga0207680_10047340
280 Ga0207684_10265927
281 Ga0207695_10072756
282 Ga0207663_10555839
283 Ga0207646_10132492
284 Ga0207646_10622577
285 Ga0207681_10011839
286 Ga0207681_10040914
287 Ga0207681_10058392
288 Ga0207681_10927994
289 Ga0207664_10073521
290 Ga0207644_10138846
291 Ga0207709_10022771
292 Ga0207669_10008960
293 Ga0207704_10152203
294 Ga0207691_10009587
295 Ga0207711_10348189
296 Ga0207689_10154656
297 Ga0207651_10193853
298 Ga0207668_10020899
299 Ga0207703_10292400
300 Ga0207703_10305432
301 Ga0207678_10581977
302 Ga0207641_10001555
303 Ga0207675_100004608
304 Ga0207675_100431685
305 Ga0207428_10299276
306 Ga0268265_10003704
307 Ga0268264_10038023
308 Ga0268264_10169392
309 Ga0307413_10046310
310 Ga0307407_10000734
311 Ga0307409_100051095
312 Ga0307416_100045896
313 Ga0307411_10109752
314 Ga0307411_10367372
315 Ga0373956_0601038
316 Ga0373942_0034448
317 Ga0373961_0048235
318 Ga0373962_0032176
319 Ga0373931_0000230
320 Ga0373937_0148280
321 Ga0453683_0024324
322 Ga0466963_0156528
323 Ga0466960_0019702
324 Ga0451576_0003970
325 Ga0466958_0369670
326 Ga0466967_0946015
327 Ga0495603_0467411
328 Ga0495629_0000486
329 Ga0495582_0005067
330 Ga0495639_0045379
331 Ga0495662_0026098
332 Ga0495664_0453484
333 Ga0495594_0006503
334 Ga0495594_0077970
335 Ga0495640_0055279
336 Ga0495622_0059249
337 Ga0495634_0007645
338 Ga0495634_0129795
339 Ga0495635_0000153
340 Ga0495647_0001055
341 Ga0495658_0000039
342 Ga0495613_0005320
343 Ga0495581_0000416
344 Ga0495676_0268233
345 Ga0495680_0000865
346 Ga0495680_0185079
347 Ga0495614_0000535
348 Ga0496108_0096856
349 Ga0501042_0901127
350 Ga0501048_0467804
351 Ga0501068_0387822
352 Ga0501083_0003503
353 nmdc:mga05p37_15547_c1
354 nmdc:mga05p37_19599_c1
355 nmdc:mga05p37_24612_c1
356 nmdc:mga05p37_33433_c1
357 nmdc:mga05p37_373385_c1
358 nmdc:mga05p37_61815_c1
359 nmdc:mga08y16_340839_c1
360 nmdc:mga08y16_43135_c1
361 nmdc:mga0n895_419906_c1
362 nmdc:mga0rr50_760746_c1
363 nmdc:mga0rr50_94248_c1
364 nmdc:mga08x19_79234_c1
365 nmdc:mga0a205_26937_c1
366 Ga0495619_0010131
367 Ga0501082_0125213

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05995

CDO_I

Cysteine dioxygenase type I

14

188

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qma-assembly1.cif.gz_A crystal structure of a putative cysteine dioxygnase from ralstonia eutropha: an alternative modeling of 2gm6 from jcsg target 361076 0.8908 6 189
6xb9-assembly1.cif.gz_F-2 crystal structure of azotobacter vinelandii 3-mercaptopropionic acid dioxygenase in complex with 3-hydroxypropionic acid 0.8858 9 169
7kov-assembly1.cif.gz_B crystal structure of azotobacter vinelandii 3-mercaptopropionic acid dioxygenase in complex with thiocyanate 0.8856 9 172
4wvz-assembly2.cif.gz_B crystal structure of artificial crosslinked thiol dioxygenase g95c variant from pseudomonas aeruginosa 0.8699 9 171
6xb9-assembly6.cif.gz_L crystal structure of azotobacter vinelandii 3-mercaptopropionic acid dioxygenase in complex with 3-hydroxypropionic acid 0.869 9 181
ID Description Score Start End Superfamily
4qmaA02 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8922 46 189 2.60.120.10
af_Q03188_852_942_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8883 54 160 2.60.120.10
af_E7FAC3_1039_1126_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8801 58 162 2.60.120.10
4qmaA02 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8621 46 189 2.60.120.10
af_E7FAC3_1039_1126_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8618 58 162 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A846ZMH1-F1-model_v4 Cysteine dioxygenase 0.9823 3 189 GO:0008198
GO:0016702
AF-A0A2R7NTG5-F1-model_v4 deleted 0.9804 11 190
AF-A0A2P1PSI6-F1-model_v4 Cysteine dioxygenase 0.9783 2 188 GO:0008198
GO:0016702
AF-A0A7G7Q163-F1-model_v4 deleted 0.975 3 190
AF-A0A2W5KRQ0-F1-model_v4 Cysteine dioxygenase 0.9748 2 189 GO:0008198
GO:0016702

Map