F280533

General Info

Members Datasets Scaffolds Average Seq Length
183 109 366 139

Family's Representative Sequence

Representative Sequence 3300005549|Ga0070704_100038787|Ga0070704_1000387873
Length 146
Sequence MGAENLMATIFTQIIEGKLPARFVWKDDRCVVFLSNRPLRPGHCLVVPREEIDHWIDLEPDLLRHLAETAQAVGRAQMAGFKPERIGMMLAGLEVPHCHFHVVPIRGLHDLDFGNQDPNPDPKMMDEAADTIRRELRRLGYVQVSD

Samples

Sample ID Description Type Environment
1 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
2 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
3 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
13 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
30 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
31 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
48 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
49 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
55 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
56 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
57 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
58 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
59 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
60 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
61 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
62 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
63 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
64 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
65 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
66 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
67 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
68 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
69 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
70 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
71 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
72 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
73 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
74 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
75 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
76 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
79 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
80 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
81 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
82 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
83 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
84 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
85 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
89 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
90 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
91 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
92 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
93 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
94 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
95 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
96 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
97 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
98 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
99 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
100 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
101 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
102 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
103 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
104 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
105 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
106 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
107 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
108 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
109 8054472261 Pseudonocardia terrae RS11V-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.81
Metatranscriptomes 0
Isolates 2.19

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.73
Nodule 0
Rhizoplane 3.28
Rhizosphere 86.34
Stem 0
Stem Tuber 0
Unclassified 8.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070704_100038787 3300005549 Bacteria 3266
2 Ga0070703_10005286 3300005406 Bacteria 3608
3 Ga0070703_10013589 3300005406 Bacteria 2313
4 Ga0070709_11262184 3300005434 Bacteria 595
5 Ga0070714_100019366 3300005435 Bacteria 5542
6 Ga0070714_100169919 3300005435 Bacteria 1978
7 Ga0070714_101069172 3300005435 Unclassified 786
8 Ga0070711_100480018 3300005439 Bacteria 1022
9 Ga0070711_101445798 3300005439 Bacteria 599
10 Ga0070708_100000028 3300005445 Bacteria 96912
11 Ga0070708_100020689 3300005445 Bacteria 5554
12 Ga0070708_100020767 3300005445 Bacteria 5544
13 Ga0070708_100043875 3300005445 Bacteria 3930
14 Ga0070708_100299692 3300005445 Bacteria 1514
15 Ga0070708_100825115 3300005445 Unclassified 871
16 Ga0070706_100000047 3300005467 Bacteria 143702
17 Ga0070706_100000161 3300005467 Bacteria 85173
18 Ga0070706_100000832 3300005467 Bacteria 34166
19 Ga0070706_100479455 3300005467 Bacteria 1157
20 Ga0070707_100000062 3300005468 Bacteria 96912
21 Ga0070707_100002377 3300005468 Bacteria 17957
22 Ga0070707_100005901 3300005468 Bacteria 11427
23 Ga0070707_100038396 3300005468 Bacteria 4574
24 Ga0070707_100117865 3300005468 Bacteria 2577
25 Ga0070707_100177810 3300005468 Bacteria 2074
26 Ga0070707_100259857 3300005468 Bacteria 1689
27 Ga0070707_100402806 3300005468 Bacteria 1328
28 Ga0070707_100896153 3300005468 Bacteria 851
29 Ga0070698_100026993 3300005471 Bacteria 5971
30 Ga0070698_100032037 3300005471 Bacteria 5447
31 Ga0070698_100091684 3300005471 Bacteria 3021
32 Ga0070698_100841123 3300005471 Bacteria 862
33 Ga0070698_100961041 3300005471 Bacteria 801
34 Ga0070699_100000070 3300005518 Bacteria 96912
35 Ga0070699_100000320 3300005518 Bacteria 46461
36 Ga0070699_100012476 3300005518 Bacteria 7333
37 Ga0070699_100056416 3300005518 Bacteria 3401
38 Ga0070699_100107418 3300005518 Bacteria 2449
39 Ga0070699_100152495 3300005518 Bacteria 2044
40 Ga0070697_100007643 3300005536 Bacteria 8415
41 Ga0070697_100064845 3300005536 Bacteria 2984
42 Ga0070697_100088655 3300005536 Bacteria 2555
43 Ga0070697_100212900 3300005536 Unclassified 1645
44 Ga0070695_100005858 3300005545 Bacteria 7251
45 Ga0070696_101128947 3300005546 Bacteria 660
46 Ga0068857_101022043 3300005577 Unclassified 796
47 Ga0068854_102016210 3300005578 Bacteria 532
48 Ga0068864_101607575 3300005618 Bacteria 654
49 Ga0081455_10423145 3300005937 Bacteria 918
50 Ga0070717_10000045 3300006028 Bacteria 108775
51 Ga0070717_11321949 3300006028 Bacteria 655
52 Ga0075363_100159272 3300006048 Bacteria 1277
53 Ga0075362_10437776 3300006177 Bacteria 663
54 Ga0075428_100228669 3300006844 Unclassified 2007
55 Ga0075428_100245720 3300006844 Bacteria 1930
56 Ga0075433_10068726 3300006852 Bacteria 3111
57 Ga0075433_10128071 3300006852 Bacteria 2255
58 Ga0075436_100007755 3300006914 Bacteria 7339
59 Ga0075436_100154200 3300006914 Bacteria 1617
60 Ga0075435_100059986 3300007076 Bacteria 3084
61 Ga0075435_100187052 3300007076 Bacteria 1752
62 Ga0099794_10001223 3300007265 Bacteria 8845
63 Ga0099794_10235519 3300007265 Bacteria 942
64 Ga0099794_10335475 3300007265 Bacteria 785
65 Ga0111539_10006069 3300009094 Bacteria 15597
66 Ga0105245_12885808 3300009098 Bacteria 533
67 Ga0114129_10488957 3300009147 Unclassified 1609
68 Ga0114129_12296040 3300009147 Unclassified 648
69 Ga0157380_12758248 3300014326 Bacteria 558
70 Ga0213876_10023412 3300021384 Bacteria 3263
71 Ga0213876_10025644 3300021384 Bacteria 3110
72 Ga0213876_10512544 3300021384 Bacteria 638
73 Ga0207653_10002965 3300025885 Bacteria 5383
74 Ga0207653_10079091 3300025885 Bacteria 1135
75 Ga0207684_10000001 3300025910 Bacteria 1115726
76 Ga0207684_10000003 3300025910 Bacteria 766933
77 Ga0207684_10000192 3300025910 Bacteria 96931
78 Ga0207684_10008399 3300025910 Bacteria 9181
79 Ga0207684_10341392 3300025910 Bacteria 1290
80 Ga0207693_10126529 3300025915 Bacteria 2009
81 Ga0207663_10327036 3300025916 Bacteria 1154
82 Ga0207646_10000144 3300025922 Bacteria 96931
83 Ga0207646_10000382 3300025922 Bacteria 59480
84 Ga0207646_10000579 3300025922 Bacteria 48026
85 Ga0207646_10001343 3300025922 Bacteria 30534
86 Ga0207646_10037332 3300025922 Bacteria 4381
87 Ga0207646_10094132 3300025922 Bacteria 2683
88 Ga0207646_10147099 3300025922 Bacteria 2123
89 Ga0207646_10212452 3300025922 Bacteria 1747
90 Ga0207646_10449902 3300025922 Bacteria 1162
91 Ga0207700_10179540 3300025928 Bacteria 1772
92 Ga0207664_10157592 3300025929 Unclassified 1934
93 Ga0207664_10189384 3300025929 Bacteria 1770
94 Ga0207665_10073754 3300025939 Bacteria 2334
95 Ga0207661_11632119 3300025944 Bacteria 590
96 Ga0207668_10156697 3300025972 Bacteria 1770
97 Ga0207676_10510286 3300026095 Bacteria 1143
98 Ga0207674_10764681 3300026116 Bacteria 932
99 Ga0207675_100411799 3300026118 Bacteria 1334
100 Ga0209588_1019506 3300027671 Bacteria 2117
101 Ga0207428_10015895 3300027907 Bacteria 6492
102 Ga0265338_10000880 3300028800 Bacteria 50622
103 Ga0265338_10496644 3300028800 Bacteria 859
104 Ga0265325_10002744 3300031241 Bacteria 11766
105 Ga0265340_10273574 3300031247 Bacteria 751
106 Ga0265339_10001369 3300031249 Bacteria 18210
107 Ga0265331_10058565 3300031250 Bacteria 1824
108 Ga0265313_10001681 3300031595 Bacteria 20434
109 Ga0265314_10056067 3300031711 Bacteria 2715
110 Ga0307416_101059972 3300032002 Bacteria 915
111 Ga0373926_0366395 3300035083 Bacteria 567
112 Ga0373943_0468897 3300035170 Bacteria 733
113 Ga0373924_0522104 3300035410 Bacteria 534
114 Ga0373935_0404256 3300035692 Bacteria 981
115 Ga0373947_0033375 3300035725 Bacteria 3038
116 Ga0373947_0278984 3300035725 Bacteria 1111
117 Ga0373925_0691068 3300037068 Unclassified 841
118 Ga0400485_12168 3300038735 Bacteria 7521
119 Ga0400485_18042 3300038735 Bacteria 1835
120 Ga0400483_011122 3300039062 Bacteria 70065
121 Ga0400483_184597 3300039062 Bacteria 102126
122 Ga0400483_252475 3300039062 Bacteria 2506
123 Ga0436365_0105356 3300039437 Bacteria 12964
124 Ga0436365_0187854 3300039437 Bacteria 9361
125 Ga0436365_1666734 3300039437 Bacteria 1122
126 Ga0451837_1010203 3300041494 Bacteria 1045
127 Ga0466972_0022340 3300044658 Bacteria 3151
128 Ga0453683_0763339 3300044673 Unclassified 635
129 Ga0466968_0397985 3300044735 Bacteria 675
130 Ga0466967_1922735 3300045976 Bacteria 588
131 Ga0495662_0068960 3300046476 Bacteria 1713
132 Ga0495664_0358505 3300046477 Bacteria 878
133 Ga0495630_0116087 3300046517 Bacteria 2029
134 Ga0495640_0022371 3300046533 Bacteria 4621
135 Ga0495586_0069510 3300046535 Bacteria 1922
136 Ga0495645_0314877 3300046543 Bacteria 1018
137 Ga0495634_0021655 3300046642 Bacteria 4540
138 Ga0495635_0320599 3300046663 Bacteria 1037
139 Ga0495658_0581359 3300046683 Bacteria 717
140 Ga0495613_0007502 3300046689 Bacteria 8125
141 Ga0495624_0639229 3300046690 Bacteria 633
142 Ga0495674_0291722 3300047319 Bacteria 1334
143 Ga0495674_0427424 3300047319 Bacteria 1067
144 Ga0495680_0387375 3300047322 Bacteria 967
145 Ga0496109_0034838 3300048912 Bacteria 4538
146 Ga0496109_1500435 3300048912 Bacteria 609
147 Ga0496111_0176674 3300048914 Bacteria 1587
148 Ga0496112_0005716 3300048915 Bacteria 10806
149 Ga0496112_0043651 3300048915 Bacteria 4390
150 Ga0496113_0209309 3300048916 Bacteria 1552
151 Ga0501036_1115654 3300049572 Unclassified 644
152 Ga0501046_0768121 3300049580 Unclassified 676
153 Ga0501067_0581506 3300049583 Unclassified 628
154 Ga0501068_0058583 3300049584 Bacteria 2337
155 Ga0501069_0298314 3300049585 Bacteria 945
156 Ga0501072_0338999 3300049588 Unclassified 1194
157 Ga0501076_0075665 3300049592 Bacteria 2699
158 Ga0501081_0759117 3300049743 Unclassified 729
159 Ga0501081_1065791 3300049743 Bacteria 611
160 Ga0501045_1048860 3300049824 Bacteria 597
161 Ga0501045_1323435 3300049824 Unclassified 524
162 nmdc:mga03683_457959_c1 3300050489 Bacteria 614
163 nmdc:mga03n38_144080_c1 3300050490 Bacteria 1193
164 nmdc:mga0qj67_149119_c1 3300050509 Bacteria 1897
165 nmdc:mga06r32_780580_c1 3300050510 Bacteria 917
166 nmdc:mga08y16_1218935_c1 3300050511 Bacteria 722
167 nmdc:mga08y16_55721_c1 3300050511 Bacteria 4131
168 nmdc:mga0n895_27058_c1 3300050512 Bacteria 5443
169 nmdc:mga0n895_672653_c1 3300050512 Bacteria 1033
170 nmdc:mga0rr50_286079_c1 3300050513 Bacteria 1377
171 nmdc:mga0rr50_353074_c1 3300050513 Bacteria 1237
172 nmdc:mga0rr50_984557_c1 3300050513 Bacteria 719
173 nmdc:mga08x19_32293_c1 3300050514 Bacteria 3298
174 nmdc:mga0a205_147865_c1 3300050515 Bacteria 2250
175 nmdc:mga0a205_24475_c1 3300050515 Bacteria 5743
176 Ga0500566_0028751 3300053094 Bacteria 3248
177 Ga0501082_0299284 3300060353 Bacteria 1401
178 Ga0501082_0548328 3300060353 Bacteria 1011
179 Ga0530510_0026623 3300061734 Bacteria 4140
180 2857712787 2857710386 Bacteria 3186771
181 2893686630 2893684298 Bacteria 2897960
182 2915360813 2915358134 Bacteria 6050864
183 8054476399 8054472261 Bacteria 7464355
184 Ga0070704_100038787
185 Ga0070703_10005286
186 Ga0070703_10013589
187 Ga0070709_11262184
188 Ga0070714_100019366
189 Ga0070714_100169919
190 Ga0070714_101069172
191 Ga0070711_100480018
192 Ga0070711_101445798
193 Ga0070708_100000028
194 Ga0070708_100020689
195 Ga0070708_100020767
196 Ga0070708_100043875
197 Ga0070708_100299692
198 Ga0070708_100825115
199 Ga0070706_100000047
200 Ga0070706_100000161
201 Ga0070706_100000832
202 Ga0070706_100479455
203 Ga0070707_100000062
204 Ga0070707_100002377
205 Ga0070707_100005901
206 Ga0070707_100038396
207 Ga0070707_100117865
208 Ga0070707_100177810
209 Ga0070707_100259857
210 Ga0070707_100402806
211 Ga0070707_100896153
212 Ga0070698_100026993
213 Ga0070698_100032037
214 Ga0070698_100091684
215 Ga0070698_100841123
216 Ga0070698_100961041
217 Ga0070699_100000070
218 Ga0070699_100000320
219 Ga0070699_100012476
220 Ga0070699_100056416
221 Ga0070699_100107418
222 Ga0070699_100152495
223 Ga0070697_100007643
224 Ga0070697_100064845
225 Ga0070697_100088655
226 Ga0070697_100212900
227 Ga0070695_100005858
228 Ga0070696_101128947
229 Ga0068857_101022043
230 Ga0068854_102016210
231 Ga0068864_101607575
232 Ga0081455_10423145
233 Ga0070717_10000045
234 Ga0070717_11321949
235 Ga0075363_100159272
236 Ga0075362_10437776
237 Ga0075428_100228669
238 Ga0075428_100245720
239 Ga0075433_10068726
240 Ga0075433_10128071
241 Ga0075436_100007755
242 Ga0075436_100154200
243 Ga0075435_100059986
244 Ga0075435_100187052
245 Ga0099794_10001223
246 Ga0099794_10235519
247 Ga0099794_10335475
248 Ga0111539_10006069
249 Ga0105245_12885808
250 Ga0114129_10488957
251 Ga0114129_12296040
252 Ga0157380_12758248
253 Ga0213876_10023412
254 Ga0213876_10025644
255 Ga0213876_10512544
256 Ga0207653_10002965
257 Ga0207653_10079091
258 Ga0207684_10000001
259 Ga0207684_10000003
260 Ga0207684_10000192
261 Ga0207684_10008399
262 Ga0207684_10341392
263 Ga0207693_10126529
264 Ga0207663_10327036
265 Ga0207646_10000144
266 Ga0207646_10000382
267 Ga0207646_10000579
268 Ga0207646_10001343
269 Ga0207646_10037332
270 Ga0207646_10094132
271 Ga0207646_10147099
272 Ga0207646_10212452
273 Ga0207646_10449902
274 Ga0207700_10179540
275 Ga0207664_10157592
276 Ga0207664_10189384
277 Ga0207665_10073754
278 Ga0207661_11632119
279 Ga0207668_10156697
280 Ga0207676_10510286
281 Ga0207674_10764681
282 Ga0207675_100411799
283 Ga0209588_1019506
284 Ga0207428_10015895
285 Ga0265338_10000880
286 Ga0265338_10496644
287 Ga0265325_10002744
288 Ga0265340_10273574
289 Ga0265339_10001369
290 Ga0265331_10058565
291 Ga0265313_10001681
292 Ga0265314_10056067
293 Ga0307416_101059972
294 Ga0373926_0366395
295 Ga0373943_0468897
296 Ga0373924_0522104
297 Ga0373935_0404256
298 Ga0373947_0033375
299 Ga0373947_0278984
300 Ga0373925_0691068
301 Ga0400485_12168
302 Ga0400485_18042
303 Ga0400483_011122
304 Ga0400483_184597
305 Ga0400483_252475
306 Ga0436365_0105356
307 Ga0436365_0187854
308 Ga0436365_1666734
309 Ga0451837_1010203
310 Ga0466972_0022340
311 Ga0453683_0763339
312 Ga0466968_0397985
313 Ga0466967_1922735
314 Ga0495662_0068960
315 Ga0495664_0358505
316 Ga0495630_0116087
317 Ga0495640_0022371
318 Ga0495586_0069510
319 Ga0495645_0314877
320 Ga0495634_0021655
321 Ga0495635_0320599
322 Ga0495658_0581359
323 Ga0495613_0007502
324 Ga0495624_0639229
325 Ga0495674_0291722
326 Ga0495674_0427424
327 Ga0495680_0387375
328 Ga0496109_0034838
329 Ga0496109_1500435
330 Ga0496111_0176674
331 Ga0496112_0005716
332 Ga0496112_0043651
333 Ga0496113_0209309
334 Ga0501036_1115654
335 Ga0501046_0768121
336 Ga0501067_0581506
337 Ga0501068_0058583
338 Ga0501069_0298314
339 Ga0501072_0338999
340 Ga0501076_0075665
341 Ga0501081_0759117
342 Ga0501081_1065791
343 Ga0501045_1048860
344 Ga0501045_1323435
345 nmdc:mga03683_457959_c1
346 nmdc:mga03n38_144080_c1
347 nmdc:mga0qj67_149119_c1
348 nmdc:mga06r32_780580_c1
349 nmdc:mga08y16_1218935_c1
350 nmdc:mga08y16_55721_c1
351 nmdc:mga0n895_27058_c1
352 nmdc:mga0n895_672653_c1
353 nmdc:mga0rr50_286079_c1
354 nmdc:mga0rr50_353074_c1
355 nmdc:mga0rr50_984557_c1
356 nmdc:mga08x19_32293_c1
357 nmdc:mga0a205_147865_c1
358 nmdc:mga0a205_24475_c1
359 Ga0500566_0028751
360 Ga0501082_0299284
361 Ga0501082_0548328
362 Ga0530510_0026623
363 2857712787
364 2893686630
365 2915360813
366 8054476399

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01230

HIT

HIT domain

16

108

0.95

PF11969

DcpS_C

Scavenger mRNA decapping enzyme C-term binding

8

112

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3p0t-assembly1.cif.gz_B crystal structure of an hit-like protein from mycobacterium paratuberculosis 0.9681 4 133
7mqw-assembly1.cif.gz_B histidine triad protein 0.9492 4 135
3p0t-assembly1.cif.gz_B crystal structure of an hit-like protein from mycobacterium paratuberculosis 0.9197 4 133
7mqw-assembly1.cif.gz_B histidine triad protein 0.9094 4 135
6ypx-assembly1.cif.gz_AAA human histidine triad nucleotide-binding protein 2 (hhint2) refined to 2.11 a in c2221 space group 0.898 1 98
ID Description Score Start End Superfamily
af_P9WML3_1_133_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.9836 2 133 3.30.428.10
af_P9WML3_1_133_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.9691 2 133 3.30.428.10
af_A0A140LH01_2_105_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.9349 16 98 3.30.428.10
1y23D01 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.9138 1 104 3.30.428.10
af_Q0IQH7_1_86_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.9125 37 102 3.30.428.10
ID Description Score Start End GO Terms
AF-A0A536J9U6-F1-model_v4 HIT family protein 1.003 1 140 GO:0003824
GO:0009117
AF-A0A535STC7-F1-model_v4 HIT family protein 1.001 1 120 GO:0003824
GO:0009117
AF-A0A1Q7DVX1-F1-model_v4 Diadenosine tetraphosphate hydrolase 1 17 140 GO:0009117
GO:0016787
AF-A0A7V8Z5A1-F1-model_v4 HIT domain-containing protein 0.9975 1 108 GO:0003824
GO:0009117
AF-A0A3D0I6E9-F1-model_v4 HIT domain-containing protein 0.9968 1 140 GO:0003824
GO:0009117

Map