F280448

General Info

Members Datasets Scaffolds Average Seq Length
183 136 366 616

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100046734|Ga0070708_1000467343
Length 733
Sequence MPRSRMRWYAQLFFALEIKQRADRAAERQPNTTPSHPLSAYAGTYEHPAYGRLSVQVDGAVLSVSFDRFNVPLKHFHYDVFEIDDPMDVLPLSGRITFLMNSKGDIDRMAVARSSASSQPHSREITMRSLRCALVLLPLAAQQPDSAPGFDLTEAMIPMRDGVRLHTTIFVPGGSHPPLPFIFTRTPYGIAHAASTLRGYYRALADDGYIFVFQDIRGRYTSEGQFVMLRPPRGREPNAIDESTDAYDTISWLLDHVPHNNGRVGMLGISYPGWLTVMAMLDPHPALKAASPQASPADMFLGDDFHHNGAFRLSYGFEYATRMETSKEQHPFDFERYDTYRWYLDLGPLSRVNAQYLHGKIPSWNDFVAHASYDRFWQRQAAAPYLTRVTVPTLNVAGWWDQEDFYGPLKIYETLEPHDTGHVNYLVVGPWNHGGWAHPEGQKLGDIDFGSPTSRYFQEKILAPWFAHFLKDQGEVALPEAMTFEAGDNEWKSWDAWPPRRNTIEKRLYFQAGGRLSFQRPGGRGPDAFDSYVSDPAHPVPYRHRPIPATYSPHGSDWPIWLVEDQRFVDDRPDVLTLESEPLTEDLTVAGDIVAHLFVSTSGTDGDWIVKLIDVYPEQYPQDWKLSGRELMVANDVFRGRFRKGFDKPEPLTPNQVTPLTIDLHTQDYRFLKAHRIMVHVQSTWFPLIDRNPQVFVPNIFEAKASDYRAATIRVYRSARWPSSVEVPVVGER

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
38 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
39 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
59 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
60 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
61 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
62 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
63 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
64 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
65 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
66 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
67 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
68 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
71 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
72 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
73 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
74 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
75 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
78 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
79 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
80 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
87 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
90 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
91 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
94 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
95 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
96 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
97 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
100 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
101 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
102 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
103 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
104 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
105 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
106 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
107 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
108 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
109 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
110 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
113 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
114 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
115 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
116 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
119 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
120 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
121 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
122 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
123 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
126 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
131 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
132 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
133 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
134 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
135 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.55
Nodule 0
Rhizoplane 0.55
Rhizosphere 96.17
Stem 0
Stem Tuber 0
Unclassified 2.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100046734 3300005445 Bacteria 3820
2 Ga0070676_10047156 3300005328 Bacteria 2515
3 Ga0070680_100011883 3300005336 Bacteria 6755
4 Ga0070689_100054597 3300005340 Bacteria 3093
5 Ga0070669_100038491 3300005353 Bacteria 3473
6 Ga0070675_100101826 3300005354 Bacteria 2420
7 Ga0070673_100005774 3300005364 Bacteria 7966
8 Ga0070714_100000840 3300005435 Bacteria 21745
9 Ga0070714_100009577 3300005435 Bacteria 7624
10 Ga0070714_100044597 3300005435 Bacteria 3755
11 Ga0070714_100097303 3300005435 Bacteria 2587
12 Ga0070713_100003390 3300005436 Bacteria 10526
13 Ga0070713_100009115 3300005436 Bacteria 7078
14 Ga0070713_100013080 3300005436 Bacteria 6115
15 Ga0070708_100168950 3300005445 Bacteria 2041
16 Ga0070681_10043178 3300005458 Bacteria 4517
17 Ga0070681_10085644 3300005458 Bacteria 3104
18 Ga0068867_100070361 3300005459 Bacteria 2615
19 Ga0070706_100007118 3300005467 Bacteria 10521
20 Ga0070706_100116312 3300005467 Bacteria 2491
21 Ga0070707_100002395 3300005468 Bacteria 17902
22 Ga0070698_100016357 3300005471 Bacteria 7832
23 Ga0070699_100010236 3300005518 Bacteria 8113
24 Ga0070699_100102517 3300005518 Bacteria 2509
25 Ga0070672_100024590 3300005543 Unclassified 4455
26 Ga0070696_100001865 3300005546 Bacteria 13841
27 Ga0068857_100009220 3300005577 Bacteria 8560
28 Ga0068852_100070512 3300005616 Unclassified 3066
29 Ga0068859_100001024 3300005617 Bacteria 28638
30 Ga0068859_100005313 3300005617 Bacteria 13099
31 Ga0068859_100137617 3300005617 Bacteria 2516
32 Ga0068864_100018457 3300005618 Bacteria 5829
33 Ga0068861_100020690 3300005719 Bacteria 4717
34 Ga0068870_10001747 3300005840 Bacteria 8904
35 Ga0068862_100016592 3300005844 Bacteria 6134
36 Ga0081455_10027140 3300005937 Bacteria 5251
37 Ga0070717_10012550 3300006028 Bacteria 6464
38 Ga0070712_100044582 3300006175 Bacteria 3059
39 Ga0075431_100118681 3300006847 Bacteria 2729
40 Ga0075433_10026143 3300006852 Bacteria 4938
41 Ga0075434_100105103 3300006871 Bacteria 2834
42 Ga0075434_100114208 3300006871 Bacteria 2713
43 Ga0097620_100001024 3300006931 Bacteria 28638
44 Ga0097620_100005313 3300006931 Bacteria 13099
45 Ga0097620_100137630 3300006931 Bacteria 2516
46 Ga0114129_10052510 3300009147 Bacteria 5720
47 Ga0114129_10077196 3300009147 Bacteria 4634
48 Ga0114129_10082777 3300009147 Bacteria 4459
49 Ga0114129_10089419 3300009147 Unclassified 4269
50 Ga0114129_10107895 3300009147 Bacteria 3844
51 Ga0105249_10000851 3300009553 Bacteria 27277
52 Ga0105239_10162848 3300010375 Bacteria 2493
53 Ga0157369_10000401 3300013105 Bacteria 57752
54 Ga0163163_10005154 3300014325 Bacteria 11267
55 Ga0157380_10083444 3300014326 Bacteria 2618
56 Ga0213875_10000038 3300021388 Bacteria 164463
57 Ga0207682_10003520 3300025893 Bacteria 6783
58 Ga0207699_10000009 3300025906 Bacteria 323355
59 Ga0207699_10045995 3300025906 Bacteria 2550
60 Ga0207645_10007032 3300025907 Bacteria 8012
61 Ga0207643_10006734 3300025908 Bacteria 6163
62 Ga0207707_10038400 3300025912 Bacteria 4184
63 Ga0207693_10029413 3300025915 Bacteria 4339
64 Ga0207693_10054710 3300025915 Bacteria 3130
65 Ga0207660_10045833 3300025917 Bacteria 3082
66 Ga0207652_10016957 3300025921 Bacteria 5957
67 Ga0207700_10004160 3300025928 Bacteria 8496
68 Ga0207700_10013139 3300025928 Bacteria 5374
69 Ga0207700_10019247 3300025928 Bacteria 4608
70 Ga0207700_10059198 3300025928 Bacteria 2897
71 Ga0207664_10035308 3300025929 Bacteria 3857
72 Ga0207706_10013282 3300025933 Bacteria 7491
73 Ga0207691_10000346 3300025940 Bacteria 46663
74 Ga0207712_10003834 3300025961 Bacteria 9495
75 Ga0207708_10033804 3300026075 Bacteria 3887
76 Ga0207648_10016207 3300026089 Bacteria 6819
77 Ga0207674_10015325 3300026116 Bacteria 8425
78 Ga0207674_10110052 3300026116 Bacteria 2730
79 Ga0207675_100052271 3300026118 Bacteria 3813
80 Ga0268266_10076762 3300028379 Bacteria 2904
81 Ga0265338_10009518 3300028800 Bacteria 11571
82 Ga0265325_10007731 3300031241 Bacteria 6405
83 Ga0265339_10001226 3300031249 Bacteria 19283
84 Ga0265331_10000268 3300031250 Bacteria 58713
85 Ga0265313_10011488 3300031595 Bacteria 5499
86 Ga0265314_10001873 3300031711 Bacteria 22553
87 Ga0265342_10004613 3300031712 Bacteria 10751
88 Ga0307405_10005805 3300031731 Bacteria 6005
89 Ga0307413_10000245 3300031824 Bacteria 16290
90 Ga0307413_10004484 3300031824 Bacteria 6082
91 Ga0307407_10000244 3300031903 Bacteria 16072
92 Ga0307407_10002765 3300031903 Bacteria 6986
93 Ga0307412_10002087 3300031911 Bacteria 11101
94 Ga0307409_100061372 3300031995 Bacteria 2937
95 Ga0307416_100003410 3300032002 Bacteria 9325
96 Ga0316583_10009470 3300032133 Bacteria 3507
97 Ga0373934_0000299 3300035086 Bacteria 17541
98 Ga0373953_0001716 3300035117 Bacteria 6455
99 Ga0373954_0005022 3300035118 Bacteria 5711
100 Ga0373946_0015187 3300035171 Bacteria 2916
101 Ga0373955_0003202 3300035172 Bacteria 7168
102 Ga0373935_0013773 3300035692 Bacteria 4884
103 Ga0373927_0000818 3300035695 Bacteria 23799
104 Ga0373927_0003278 3300035695 Bacteria 11643
105 Ga0373927_0005551 3300035695 Bacteria 8676
106 Ga0373933_0000302 3300035724 Bacteria 31854
107 Ga0373947_0000246 3300035725 Bacteria 30577
108 Ga0373937_0000193 3300036401 Bacteria 59348
109 Ga0373937_0007891 3300036401 Bacteria 9226
110 Ga0373937_0030056 3300036401 Bacteria 4921
111 Ga0373925_0000429 3300037068 Bacteria 42557
112 Ga0436364_1006074 3300037853 Bacteria 129171
113 Ga0436365_0827037 3300039437 Bacteria 5715
114 Ga0436365_1216021 3300039437 Bacteria 2374
115 Ga0436363_0245427 3300039450 Bacteria 3503
116 Ga0451577_0001166 3300042876 Bacteria 37023
117 Ga0451577_0005384 3300042876 Bacteria 13133
118 Ga0451577_0022814 3300042876 Bacteria 5713
119 Ga0451577_0160714 3300042876 Bacteria 2023
120 Ga0453683_0013573 3300044673 Bacteria 5312
121 Ga0453683_0025622 3300044673 Bacteria 3745
122 Ga0453684_0000332 3300044712 Bacteria 197651
123 Ga0453684_0146261 3300044712 Bacteria 2814
124 Ga0453684_0275184 3300044712 Bacteria 1922
125 Ga0451576_0062323 3300045051 Bacteria 3888
126 Ga0451576_0102559 3300045051 Bacteria 2976
127 Ga0495592_0000492 3300046454 Bacteria 28815
128 Ga0495603_0002721 3300046455 Bacteria 10426
129 Ga0495629_0008254 3300046459 Bacteria 7657
130 Ga0495629_0073906 3300046459 Unclassified 2380
131 Ga0495651_0000207 3300046462 Bacteria 44938
132 Ga0495653_0000104 3300046463 Bacteria 69732
133 Ga0495580_0005098 3300046472 Bacteria 10940
134 Ga0495582_0008368 3300046473 Bacteria 5708
135 Ga0495639_0000056 3300046475 Bacteria 49657
136 Ga0495608_0000062 3300046511 Bacteria 85886
137 Ga0495628_0000598 3300046516 Bacteria 33162
138 Ga0495630_0002104 3300046517 Bacteria 13839
139 Ga0495652_0019272 3300046529 Bacteria 6077
140 Ga0495665_0000403 3300046531 Bacteria 21978
141 Ga0495665_0022370 3300046531 Unclassified 3398
142 Ga0495587_0000122 3300046536 Bacteria 60002
143 Ga0495645_0000246 3300046543 Bacteria 39503
144 Ga0495667_0001022 3300046559 Bacteria 18095
145 Ga0495635_0000038 3300046663 Bacteria 91029
146 Ga0495588_0000465 3300046674 Bacteria 20297
147 Ga0495657_0000177 3300046675 Bacteria 57202
148 Ga0495599_0001339 3300046678 Bacteria 14049
149 Ga0495623_0000165 3300046679 Bacteria 41152
150 Ga0495646_0000162 3300046680 Bacteria 33922
151 Ga0495658_0000270 3300046683 Bacteria 29524
152 Ga0495613_0010070 3300046689 Bacteria 7022
153 Ga0495613_0015816 3300046689 Bacteria 5616
154 Ga0495600_0000011 3300046809 Bacteria 141462
155 Ga0495581_0001203 3300047315 Bacteria 14226
156 Ga0495604_0000114 3300047317 Bacteria 68060
157 Ga0495674_0000421 3300047319 Bacteria 38092
158 Ga0495674_0005100 3300047319 Bacteria 12618
159 Ga0495680_0006081 3300047322 Bacteria 11271
160 Ga0495675_0001466 3300047444 Bacteria 14275
161 Ga0495684_0000402 3300047471 Bacteria 35352
162 Ga0495593_0001576 3300047673 Bacteria 13450
163 Ga0495602_0000151 3300048088 Bacteria 63929
164 Ga0495614_0000227 3300048089 Bacteria 21846
165 Ga0496104_0060503 3300048907 Bacteria 3588
166 Ga0501031_0093694 3300049568 Bacteria 1960
167 Ga0501079_0050863 3300049741 Bacteria 3198
168 Ga0501045_0019598 3300049824 Bacteria 4826
169 nmdc:mga05p37_11663_c1 3300050507 Bacteria 10474
170 nmdc:mga05p37_170084_c1 3300050507 Bacteria 2658
171 nmdc:mga05p37_232666_c1 3300050507 Bacteria 2219
172 nmdc:mga05p37_81826_c1 3300050507 Bacteria 3978
173 nmdc:mga06r32_48033_c1 3300050510 Bacteria 4079
174 nmdc:mga0n895_107204_c1 3300050512 Bacteria 2807
175 nmdc:mga08x19_5868_c1 3300050514 Bacteria 7264
176 nmdc:mga0a205_102036_c1 3300050515 Bacteria 2768
177 nmdc:mga0a205_154125_c1 3300050515 Bacteria 2196
178 Ga0495601_0001160 3300053077 Bacteria 14402
179 Ga0495601_0004152 3300053077 Bacteria 8349
180 Ga0495612_0000254 3300053078 Bacteria 22106
181 Ga0495619_0000748 3300053085 Bacteria 21190
182 Ga0500568_0001633 3300053139 Bacteria 14138
183 Ga0501084_0008453 3300054114 Bacteria 8510
184 Ga0070708_100046734
185 Ga0070676_10047156
186 Ga0070680_100011883
187 Ga0070689_100054597
188 Ga0070669_100038491
189 Ga0070675_100101826
190 Ga0070673_100005774
191 Ga0070714_100000840
192 Ga0070714_100009577
193 Ga0070714_100044597
194 Ga0070714_100097303
195 Ga0070713_100003390
196 Ga0070713_100009115
197 Ga0070713_100013080
198 Ga0070708_100168950
199 Ga0070681_10043178
200 Ga0070681_10085644
201 Ga0068867_100070361
202 Ga0070706_100007118
203 Ga0070706_100116312
204 Ga0070707_100002395
205 Ga0070698_100016357
206 Ga0070699_100010236
207 Ga0070699_100102517
208 Ga0070672_100024590
209 Ga0070696_100001865
210 Ga0068857_100009220
211 Ga0068852_100070512
212 Ga0068859_100001024
213 Ga0068859_100005313
214 Ga0068859_100137617
215 Ga0068864_100018457
216 Ga0068861_100020690
217 Ga0068870_10001747
218 Ga0068862_100016592
219 Ga0081455_10027140
220 Ga0070717_10012550
221 Ga0070712_100044582
222 Ga0075431_100118681
223 Ga0075433_10026143
224 Ga0075434_100105103
225 Ga0075434_100114208
226 Ga0097620_100001024
227 Ga0097620_100005313
228 Ga0097620_100137630
229 Ga0114129_10052510
230 Ga0114129_10077196
231 Ga0114129_10082777
232 Ga0114129_10089419
233 Ga0114129_10107895
234 Ga0105249_10000851
235 Ga0105239_10162848
236 Ga0157369_10000401
237 Ga0163163_10005154
238 Ga0157380_10083444
239 Ga0213875_10000038
240 Ga0207682_10003520
241 Ga0207699_10000009
242 Ga0207699_10045995
243 Ga0207645_10007032
244 Ga0207643_10006734
245 Ga0207707_10038400
246 Ga0207693_10029413
247 Ga0207693_10054710
248 Ga0207660_10045833
249 Ga0207652_10016957
250 Ga0207700_10004160
251 Ga0207700_10013139
252 Ga0207700_10019247
253 Ga0207700_10059198
254 Ga0207664_10035308
255 Ga0207706_10013282
256 Ga0207691_10000346
257 Ga0207712_10003834
258 Ga0207708_10033804
259 Ga0207648_10016207
260 Ga0207674_10015325
261 Ga0207674_10110052
262 Ga0207675_100052271
263 Ga0268266_10076762
264 Ga0265338_10009518
265 Ga0265325_10007731
266 Ga0265339_10001226
267 Ga0265331_10000268
268 Ga0265313_10011488
269 Ga0265314_10001873
270 Ga0265342_10004613
271 Ga0307405_10005805
272 Ga0307413_10000245
273 Ga0307413_10004484
274 Ga0307407_10000244
275 Ga0307407_10002765
276 Ga0307412_10002087
277 Ga0307409_100061372
278 Ga0307416_100003410
279 Ga0316583_10009470
280 Ga0373934_0000299
281 Ga0373953_0001716
282 Ga0373954_0005022
283 Ga0373946_0015187
284 Ga0373955_0003202
285 Ga0373935_0013773
286 Ga0373927_0000818
287 Ga0373927_0003278
288 Ga0373927_0005551
289 Ga0373933_0000302
290 Ga0373947_0000246
291 Ga0373937_0000193
292 Ga0373937_0007891
293 Ga0373937_0030056
294 Ga0373925_0000429
295 Ga0436364_1006074
296 Ga0436365_0827037
297 Ga0436365_1216021
298 Ga0436363_0245427
299 Ga0451577_0001166
300 Ga0451577_0005384
301 Ga0451577_0022814
302 Ga0451577_0160714
303 Ga0453683_0013573
304 Ga0453683_0025622
305 Ga0453684_0000332
306 Ga0453684_0146261
307 Ga0453684_0275184
308 Ga0451576_0062323
309 Ga0451576_0102559
310 Ga0495592_0000492
311 Ga0495603_0002721
312 Ga0495629_0008254
313 Ga0495629_0073906
314 Ga0495651_0000207
315 Ga0495653_0000104
316 Ga0495580_0005098
317 Ga0495582_0008368
318 Ga0495639_0000056
319 Ga0495608_0000062
320 Ga0495628_0000598
321 Ga0495630_0002104
322 Ga0495652_0019272
323 Ga0495665_0000403
324 Ga0495665_0022370
325 Ga0495587_0000122
326 Ga0495645_0000246
327 Ga0495667_0001022
328 Ga0495635_0000038
329 Ga0495588_0000465
330 Ga0495657_0000177
331 Ga0495599_0001339
332 Ga0495623_0000165
333 Ga0495646_0000162
334 Ga0495658_0000270
335 Ga0495613_0010070
336 Ga0495613_0015816
337 Ga0495600_0000011
338 Ga0495581_0001203
339 Ga0495604_0000114
340 Ga0495674_0000421
341 Ga0495674_0005100
342 Ga0495680_0006081
343 Ga0495675_0001466
344 Ga0495684_0000402
345 Ga0495593_0001576
346 Ga0495602_0000151
347 Ga0495614_0000227
348 Ga0496104_0060503
349 Ga0501031_0093694
350 Ga0501079_0050863
351 Ga0501045_0019598
352 nmdc:mga05p37_11663_c1
353 nmdc:mga05p37_170084_c1
354 nmdc:mga05p37_232666_c1
355 nmdc:mga05p37_81826_c1
356 nmdc:mga06r32_48033_c1
357 nmdc:mga0n895_107204_c1
358 nmdc:mga08x19_5868_c1
359 nmdc:mga0a205_102036_c1
360 nmdc:mga0a205_154125_c1
361 Ga0495601_0001160
362 Ga0495601_0004152
363 Ga0495612_0000254
364 Ga0495619_0000748
365 Ga0500568_0001633
366 Ga0501084_0008453

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02129

Peptidase_S15

X-Pro dipeptidyl-peptidase (S15 family)

161

435

0.9

PF08530

PepX_C

X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain

467

726

0.9

PF11954

DUF3471

Domain of unknown function (DUF3471)

27

128

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pf1-assembly1.cif.gz_A crystal structure of aminopeptidase from marine sediment archaeon thaumarchaeota archaeon 0.9462 40 623
4pf1-assembly1.cif.gz_C crystal structure of aminopeptidase from marine sediment archaeon thaumarchaeota archaeon 0.9445 40 623
1mpx-assembly1.cif.gz_C alpha-amino acid ester hydrolase labeled with selenomethionine 0.9191 37 621
1ryy-assembly2.cif.gz_F acetobacter turbidans alpha-amino acid ester hydrolase y206a mutant 0.9063 26 623
4pf1-assembly1.cif.gz_A crystal structure of aminopeptidase from marine sediment archaeon thaumarchaeota archaeon 0.904 40 623
ID Description Score Start End Superfamily
1nx9A03 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.9411 398 623 2.60.120.260
1nx9A03 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8828 398 623 2.60.120.260
1mpxB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8815 39 384 3.40.50.1820
1mpxB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.8782 39 384 3.40.50.1820
af_Q4CVF2_1_139_2.60.120.260 Mainly Beta;Sandwich;Jelly Rolls;Galactose-binding domain-like 0.8695 457 623 2.60.120.260
ID Description Score Start End GO Terms
AF-A0A2W6VU64-F1-model_v4 Glutaryl-7-ACA acylase 0.9731 480 623 GO:0008239
AF-A0A7W0QPU2-F1-model_v4 CocE/NonD family hydrolase 0.9728 66 623 GO:0008239
AF-A0A2V8RZU9-F1-model_v4 X-Pro dipeptidyl-peptidase 0.9714 293 626 GO:0008239
AF-A0A7W0QPU2-F1-model_v4 CocE/NonD family hydrolase 0.9711 66 623 GO:0008239
AF-A0A3N5TKJ4-F1-model_v4 deleted 0.971 104 623

Map