F280444

General Info

Members Datasets Scaffolds Average Seq Length
183 109 366 451

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100010779|Ga0070708_1000107793
Length 490
Sequence MELSRSAPIGQVEYARGVTVPPATTSRPVRRAPADLPFGFADRALAEALATERGEPDWLRDDRLAAAAAFESMPVEVNQLYTPYVDLRGASLMDARPYVQTASGPDAGAATEASAATLPDGTSALIEVREDGVAALVLGEAATRAGVTLETFGAALARDLDGLRADLEGAPNLPANDKLAMLARGFWSQGVRLTVPDGVRLEQPVLVRWRSGVPQRALITRTLVHLGVGASASLVEELLPSGPPIECAAGETVPQGLFTGTTEVILDRGASLAMASIQDLGPEQAAFQHRHATIGESGSLHWALAQLGGRLVRSRVDNVLHGDRSSVEQVEIVFGGEEQLFDLTSYTRHLGRDTTGNLLSKAALMDRSRSYMKGLITIEKSAVGTDSFLGEFGMNLSRAARAVAIPSLEIDQPDCRRAAHSSSVGPIDPSQLFYLESRGIAPDEARKFIVLGFLEPVVARVPLEATRDRLRELLDAKWVVGAGASVPSAA

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
57 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
58 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
59 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
60 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
61 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
64 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
65 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
66 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
67 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
68 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
69 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
70 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
71 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
74 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
75 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
76 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
77 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
78 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
79 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
80 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
81 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
82 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
92 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
93 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
94 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
98 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
101 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
102 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
106 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
107 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 14.75
Rhizosphere 85.25
Stem 0
Stem Tuber 0
Unclassified 5.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100010779 3300005445 Bacteria 7421
2 Ga0070680_100000458 3300005336 Bacteria 27782
3 Ga0070680_100161069 3300005336 Bacteria 1886
4 Ga0070689_100107445 3300005340 Bacteria 2215
5 Ga0070687_100041697 3300005343 Unclassified 2321
6 Ga0070692_10031270 3300005345 Bacteria 2667
7 Ga0070659_100031230 3300005366 Bacteria 4125
8 Ga0070705_100121942 3300005440 Bacteria 1684
9 Ga0070700_100074925 3300005441 Bacteria 2170
10 Ga0070694_100060992 3300005444 Bacteria 2573
11 Ga0070708_100015684 3300005445 Bacteria 6261
12 Ga0070708_100020337 3300005445 Bacteria 5596
13 Ga0070708_100027341 3300005445 Bacteria 4894
14 Ga0070708_100046223 3300005445 Bacteria 3841
15 Ga0070706_100001875 3300005467 Bacteria 21714
16 Ga0070706_100059584 3300005467 Bacteria 3524
17 Ga0070706_100139337 3300005467 Unclassified 2264
18 Ga0070707_100003529 3300005468 Bacteria 14761
19 Ga0070707_100013306 3300005468 Bacteria 7697
20 Ga0070707_100143169 3300005468 Bacteria 2327
21 Ga0070707_100158873 3300005468 Bacteria 2202
22 Ga0070698_100016117 3300005471 Bacteria 7891
23 Ga0070698_100091366 3300005471 Bacteria 3027
24 Ga0070698_100098274 3300005471 Bacteria 2902
25 Ga0070698_100127860 3300005471 Bacteria 2498
26 Ga0070699_100003054 3300005518 Bacteria 14853
27 Ga0070699_100026683 3300005518 Bacteria 4983
28 Ga0070699_100059506 3300005518 Unclassified 3309
29 Ga0070684_100092621 3300005535 Bacteria 2689
30 Ga0070697_100020200 3300005536 Bacteria 5266
31 Ga0070697_100033322 3300005536 Bacteria 4148
32 Ga0068853_100108428 3300005539 Bacteria 2464
33 Ga0070686_100125389 3300005544 Bacteria 1769
34 Ga0070695_100053457 3300005545 Bacteria 2597
35 Ga0070696_100006337 3300005546 Bacteria 7921
36 Ga0070696_100029969 3300005546 Bacteria 3722
37 Ga0070696_100036882 3300005546 Bacteria 3372
38 Ga0070696_100144838 3300005546 Bacteria 1739
39 Ga0070696_100151135 3300005546 Bacteria 1704
40 Ga0070693_100010011 3300005547 Bacteria 4732
41 Ga0070704_100063737 3300005549 Bacteria 2646
42 Ga0070704_100120095 3300005549 Bacteria 2017
43 Ga0070664_100258217 3300005564 Bacteria 1567
44 Ga0068864_100126539 3300005618 Bacteria 2290
45 Ga0068860_100126875 3300005843 Bacteria 2446
46 Ga0081539_10001884 3300005985 Bacteria 32727
47 Ga0081539_10008731 3300005985 Bacteria 8709
48 Ga0075428_100001305 3300006844 Bacteria 26445
49 Ga0075431_100146356 3300006847 Bacteria 2435
50 Ga0075433_10046574 3300006852 Bacteria 3771
51 Ga0075434_100166038 3300006871 Bacteria 2227
52 Ga0105245_10011078 3300009098 Bacteria 7849
53 Ga0114129_10001114 3300009147 Bacteria 35435
54 Ga0114129_10029838 3300009147 Bacteria 7723
55 Ga0114129_10426265 3300009147 Bacteria 1744
56 Ga0105248_10089673 3300009177 Bacteria 3462
57 Ga0105239_10184301 3300010375 Bacteria 2336
58 Ga0105239_10223121 3300010375 Bacteria 2114
59 Ga0157378_10056367 3300013297 Bacteria 3502
60 Ga0163162_10012775 3300013306 Bacteria 8203
61 Ga0157375_10026738 3300013308 Bacteria 5384
62 Ga0157375_10050046 3300013308 Bacteria 4097
63 Ga0157375_10142504 3300013308 Bacteria 2525
64 Ga0163163_10064496 3300014325 Bacteria 3634
65 Ga0163163_10197514 3300014325 Bacteria 2060
66 Ga0163163_10240433 3300014325 Bacteria 1860
67 Ga0163163_10240687 3300014325 Bacteria 1859
68 Ga0182008_10017803 3300014497 Bacteria 3683
69 Ga0157379_10053139 3300014968 Bacteria 3619
70 Ga0207688_10051964 3300025901 Bacteria 2296
71 Ga0207684_10000259 3300025910 Bacteria 78593
72 Ga0207684_10086167 3300025910 Bacteria 2675
73 Ga0207660_10000001 3300025917 Bacteria 1034169
74 Ga0207662_10031873 3300025918 Unclassified 3064
75 Ga0207657_10090552 3300025919 Bacteria 2553
76 Ga0207652_10252160 3300025921 Bacteria 1591
77 Ga0207646_10005157 3300025922 Bacteria 13835
78 Ga0207646_10005955 3300025922 Bacteria 12717
79 Ga0207646_10028969 3300025922 Bacteria 5036
80 Ga0207646_10036191 3300025922 Bacteria 4457
81 Ga0207646_10063954 3300025922 Bacteria 3284
82 Ga0207646_10162631 3300025922 Unclassified 2015
83 Ga0207659_10014016 3300025926 Bacteria 5158
84 Ga0207687_10194022 3300025927 Bacteria 1583
85 Ga0207690_10061921 3300025932 Bacteria 2545
86 Ga0207669_10111597 3300025937 Bacteria 1834
87 Ga0207639_10023889 3300026041 Bacteria 4418
88 Ga0207708_10050089 3300026075 Bacteria 3180
89 Ga0207641_10104940 3300026088 Bacteria 2496
90 Ga0207676_10031182 3300026095 Bacteria 4008
91 Ga0207674_10019019 3300026116 Bacteria 7444
92 Ga0207674_10116753 3300026116 Bacteria 2639
93 Ga0265318_10028097 3300028577 Bacteria 2203
94 Ga0265330_10024224 3300031235 Bacteria 2753
95 Ga0265320_10003896 3300031240 Bacteria 9868
96 Ga0265340_10023284 3300031247 Bacteria 3159
97 Ga0265316_10034488 3300031344 Bacteria 4110
98 Ga0265314_10010660 3300031711 Bacteria 7649
99 Ga0307416_100022325 3300032002 Bacteria 4566
100 Ga0307415_100004122 3300032126 Bacteria 7497
101 Ga0316574_0034564 3300035398 Bacteria 3083
102 Ga0316574_0059126 3300035398 Bacteria 2403
103 Ga0373931_0029707 3300035691 Bacteria 2809
104 Ga0439465_0013475 3300041413 Unclassified 2548
105 Ga0450910_005759 3300042147 Unclassified 1697
106 Ga0495604_0094994 3300047317 Bacteria 2203
107 Ga0496101_0011984 3300048904 Bacteria 5777
108 Ga0496102_0060690 3300048905 Bacteria 3459
109 Ga0496102_0205584 3300048905 Bacteria 1856
110 Ga0496103_0030714 3300048906 Bacteria 3271
111 Ga0496104_0014743 3300048907 Bacteria 7064
112 Ga0496105_0000281 3300048908 Bacteria 33474
113 Ga0496105_0005171 3300048908 Bacteria 9894
114 Ga0496105_0013773 3300048908 Bacteria 6422
115 Ga0496107_0099047 3300048910 Bacteria 2136
116 Ga0496107_0150191 3300048910 Bacteria 1723
117 Ga0496108_0007038 3300048911 Bacteria 9108
118 Ga0496108_0047905 3300048911 Bacteria 3573
119 Ga0496109_0014150 3300048912 Bacteria 6937
120 Ga0496109_0025606 3300048912 Bacteria 5258
121 Ga0496109_0082012 3300048912 Bacteria 2972
122 Ga0496110_0031802 3300048913 Bacteria 4555
123 Ga0496110_0148621 3300048913 Bacteria 2120
124 Ga0496111_0009308 3300048914 Bacteria 6549
125 Ga0496111_0023887 3300048914 Bacteria 4297
126 Ga0496112_0000012 3300048915 Bacteria 243643
127 Ga0496112_0001724 3300048915 Bacteria 17092
128 Ga0496112_0094056 3300048915 Bacteria 2968
129 Ga0496112_0126538 3300048915 Bacteria 2526
130 Ga0496113_0004095 3300048916 Bacteria 8882
131 Ga0496113_0119570 3300048916 Bacteria 2059
132 Ga0496114_0023563 3300048917 Bacteria 5024
133 Ga0496114_0114353 3300048917 Bacteria 2314
134 Ga0501031_0009889 3300049568 Bacteria 6209
135 Ga0501032_0048506 3300049569 Bacteria 2867
136 Ga0501033_0061051 3300049570 Bacteria 2779
137 Ga0501036_0006634 3300049572 Bacteria 9407
138 Ga0501036_0110462 3300049572 Bacteria 2323
139 Ga0501039_0026247 3300049575 Bacteria 4477
140 Ga0501039_0030771 3300049575 Bacteria 4139
141 Ga0501039_0050414 3300049575 Bacteria 3220
142 Ga0501039_0109742 3300049575 Bacteria 2157
143 Ga0501039_0116366 3300049575 Bacteria 2093
144 Ga0501040_0004943 3300049576 Bacteria 8629
145 Ga0501041_0036838 3300049577 Bacteria 2963
146 Ga0501041_0072322 3300049577 Unclassified 2118
147 Ga0501041_0080704 3300049577 Bacteria 2003
148 Ga0501042_0019396 3300049578 Bacteria 4721
149 Ga0501048_0042033 3300049582 Bacteria 3274
150 Ga0501048_0089397 3300049582 Bacteria 2173
151 Ga0501067_0088111 3300049583 Unclassified 1722
152 Ga0501069_0017880 3300049585 Bacteria 3823
153 Ga0501069_0020347 3300049585 Bacteria 3595
154 Ga0501071_0106691 3300049587 Bacteria 2068
155 Ga0501072_0042078 3300049588 Bacteria 3589
156 Ga0501072_0163286 3300049588 Bacteria 1777
157 Ga0501075_0018886 3300049591 Bacteria 4997
158 Ga0501076_0007084 3300049592 Bacteria 8145
159 Ga0501076_0080315 3300049592 Bacteria 2618
160 Ga0501077_0043985 3300049593 Bacteria 2838
161 Ga0501077_0052795 3300049593 Bacteria 2581
162 Ga0501077_0074743 3300049593 Bacteria 2146
163 Ga0501079_0077801 3300049741 Bacteria 2566
164 Ga0501080_0005630 3300049742 Bacteria 11194
165 Ga0501080_0060507 3300049742 Bacteria 3526
166 Ga0501080_0326790 3300049742 Bacteria 1388
167 Ga0501081_0040268 3300049743 Bacteria 3199
168 Ga0501083_0077060 3300049744 Bacteria 2213
169 Ga0501035_0028514 3300049822 Bacteria 5095
170 Ga0501045_0005546 3300049824 Bacteria 8728
171 Ga0501045_0141027 3300049824 Unclassified 1792
172 nmdc:mga05p37_142_c1 3300050507 Bacteria 67494
173 nmdc:mga05p37_358898_c1 3300050507 Bacteria 1714
174 nmdc:mga0a205_18026_c1 3300050515 Bacteria 3583
175 nmdc:mga0a205_32872_c1 3300050515 Bacteria 4974
176 nmdc:mga0a205_36482_c1 3300050515 Bacteria 4723
177 Ga0495612_0000135 3300053078 Bacteria 31349
178 Ga0501084_0033498 3300054114 Bacteria 4298
179 Ga0501084_0129278 3300054114 Bacteria 2126
180 Ga0501082_0186706 3300060353 Bacteria 1804
181 Ga0501082_0246994 3300060353 Bacteria 1553
182 Ga0530510_0019637 3300061734 Bacteria 4798
183 Ga0530510_0055310 3300061734 Bacteria 2867
184 Ga0070708_100010779
185 Ga0070680_100000458
186 Ga0070680_100161069
187 Ga0070689_100107445
188 Ga0070687_100041697
189 Ga0070692_10031270
190 Ga0070659_100031230
191 Ga0070705_100121942
192 Ga0070700_100074925
193 Ga0070694_100060992
194 Ga0070708_100015684
195 Ga0070708_100020337
196 Ga0070708_100027341
197 Ga0070708_100046223
198 Ga0070706_100001875
199 Ga0070706_100059584
200 Ga0070706_100139337
201 Ga0070707_100003529
202 Ga0070707_100013306
203 Ga0070707_100143169
204 Ga0070707_100158873
205 Ga0070698_100016117
206 Ga0070698_100091366
207 Ga0070698_100098274
208 Ga0070698_100127860
209 Ga0070699_100003054
210 Ga0070699_100026683
211 Ga0070699_100059506
212 Ga0070684_100092621
213 Ga0070697_100020200
214 Ga0070697_100033322
215 Ga0068853_100108428
216 Ga0070686_100125389
217 Ga0070695_100053457
218 Ga0070696_100006337
219 Ga0070696_100029969
220 Ga0070696_100036882
221 Ga0070696_100144838
222 Ga0070696_100151135
223 Ga0070693_100010011
224 Ga0070704_100063737
225 Ga0070704_100120095
226 Ga0070664_100258217
227 Ga0068864_100126539
228 Ga0068860_100126875
229 Ga0081539_10001884
230 Ga0081539_10008731
231 Ga0075428_100001305
232 Ga0075431_100146356
233 Ga0075433_10046574
234 Ga0075434_100166038
235 Ga0105245_10011078
236 Ga0114129_10001114
237 Ga0114129_10029838
238 Ga0114129_10426265
239 Ga0105248_10089673
240 Ga0105239_10184301
241 Ga0105239_10223121
242 Ga0157378_10056367
243 Ga0163162_10012775
244 Ga0157375_10026738
245 Ga0157375_10050046
246 Ga0157375_10142504
247 Ga0163163_10064496
248 Ga0163163_10197514
249 Ga0163163_10240433
250 Ga0163163_10240687
251 Ga0182008_10017803
252 Ga0157379_10053139
253 Ga0207688_10051964
254 Ga0207684_10000259
255 Ga0207684_10086167
256 Ga0207660_10000001
257 Ga0207662_10031873
258 Ga0207657_10090552
259 Ga0207652_10252160
260 Ga0207646_10005157
261 Ga0207646_10005955
262 Ga0207646_10028969
263 Ga0207646_10036191
264 Ga0207646_10063954
265 Ga0207646_10162631
266 Ga0207659_10014016
267 Ga0207687_10194022
268 Ga0207690_10061921
269 Ga0207669_10111597
270 Ga0207639_10023889
271 Ga0207708_10050089
272 Ga0207641_10104940
273 Ga0207676_10031182
274 Ga0207674_10019019
275 Ga0207674_10116753
276 Ga0265318_10028097
277 Ga0265330_10024224
278 Ga0265320_10003896
279 Ga0265340_10023284
280 Ga0265316_10034488
281 Ga0265314_10010660
282 Ga0307416_100022325
283 Ga0307415_100004122
284 Ga0316574_0034564
285 Ga0316574_0059126
286 Ga0373931_0029707
287 Ga0439465_0013475
288 Ga0450910_005759
289 Ga0495604_0094994
290 Ga0496101_0011984
291 Ga0496102_0060690
292 Ga0496102_0205584
293 Ga0496103_0030714
294 Ga0496104_0014743
295 Ga0496105_0000281
296 Ga0496105_0005171
297 Ga0496105_0013773
298 Ga0496107_0099047
299 Ga0496107_0150191
300 Ga0496108_0007038
301 Ga0496108_0047905
302 Ga0496109_0014150
303 Ga0496109_0025606
304 Ga0496109_0082012
305 Ga0496110_0031802
306 Ga0496110_0148621
307 Ga0496111_0009308
308 Ga0496111_0023887
309 Ga0496112_0000012
310 Ga0496112_0001724
311 Ga0496112_0094056
312 Ga0496112_0126538
313 Ga0496113_0004095
314 Ga0496113_0119570
315 Ga0496114_0023563
316 Ga0496114_0114353
317 Ga0501031_0009889
318 Ga0501032_0048506
319 Ga0501033_0061051
320 Ga0501036_0006634
321 Ga0501036_0110462
322 Ga0501039_0026247
323 Ga0501039_0030771
324 Ga0501039_0050414
325 Ga0501039_0109742
326 Ga0501039_0116366
327 Ga0501040_0004943
328 Ga0501041_0036838
329 Ga0501041_0072322
330 Ga0501041_0080704
331 Ga0501042_0019396
332 Ga0501048_0042033
333 Ga0501048_0089397
334 Ga0501067_0088111
335 Ga0501069_0017880
336 Ga0501069_0020347
337 Ga0501071_0106691
338 Ga0501072_0042078
339 Ga0501072_0163286
340 Ga0501075_0018886
341 Ga0501076_0007084
342 Ga0501076_0080315
343 Ga0501077_0043985
344 Ga0501077_0052795
345 Ga0501077_0074743
346 Ga0501079_0077801
347 Ga0501080_0005630
348 Ga0501080_0060507
349 Ga0501080_0326790
350 Ga0501081_0040268
351 Ga0501083_0077060
352 Ga0501035_0028514
353 Ga0501045_0005546
354 Ga0501045_0141027
355 nmdc:mga05p37_142_c1
356 nmdc:mga05p37_358898_c1
357 nmdc:mga0a205_18026_c1
358 nmdc:mga0a205_32872_c1
359 nmdc:mga0a205_36482_c1
360 Ga0495612_0000135
361 Ga0501084_0033498
362 Ga0501084_0129278
363 Ga0501082_0186706
364 Ga0501082_0246994
365 Ga0530510_0019637
366 Ga0530510_0055310

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01458

SUFBD

SUF system FeS cluster assembly, SufBD

217

453

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5awf-assembly1.cif.gz_A crystal structure of sufb-sufc-sufd complex from escherichia coli 0.8468 29 435
5awf-assembly2.cif.gz_E crystal structure of sufb-sufc-sufd complex from escherichia coli 0.8434 29 440
5awf-assembly2.cif.gz_E crystal structure of sufb-sufc-sufd complex from escherichia coli 0.8288 29 440
5awf-assembly1.cif.gz_A crystal structure of sufb-sufc-sufd complex from escherichia coli 0.8179 29 435
5awg-assembly1.cif.gz_A crystal structure of hg-bound sufb-sufc-sufd complex from escherichia coli 0.8137 29 436
ID Description Score Start End Superfamily
af_O59748_153_251_1.10.472.10 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Cyclin-like 0.8608 29 58 1.10.472.10
af_Q5A4H9_57_155_1.10.472.10 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Cyclin-like 0.7887 29 57 1.10.472.10
af_K7LN63_36_163_1.10.472.10 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Cyclin-like 0.7769 29 57 1.10.472.10
af_C4J4Z3_85_205_1.10.472.10 Mainly Alpha;Orthogonal Bundle;Cyclin A; domain 1;Cyclin-like 0.3916 1 95 1.10.472.10
af_A0A1P8BCW1_1_144_3.80.20.20 Alpha Beta;Alpha-Beta Horseshoe;24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A;Receptor L-domain 0.3755 154 383 3.80.20.20
ID Description Score Start End GO Terms
AF-A0A382YK63-F1-model_v4 SUF system FeS cluster assembly SufBD core domain-containing protein 0.9632 259 359 GO:0016226
AF-A0A535J0E5-F1-model_v4 SUF system FeS cluster assembly SufBD core domain-containing protein 0.954 286 439 GO:0016226
AF-A0A524NXE0-F1-model_v4 Fe-S cluster assembly protein SufD 0.9439 215 440 GO:0016226
AF-A0A3M1AJQ1-F1-model_v4 Fe-S cluster assembly protein SufD 0.9415 132 436 GO:0016226
AF-K2F0Y9-F1-model_v4 ABC-type transport system involved in Fe-S cluster assembly 0.9391 187 433 GO:0016226

Map