F279370

General Info

Members Datasets Scaffolds Average Seq Length
182 102 182 312

Family's Representative Sequence

Representative Sequence 3300031712|Ga0265342_10066036|Ga0265342_100660363
Length 369
Sequence MVAANARSGLRLGDSCVCSVRMSVWSDWQPLSLSPPFTATTLAETLDGGQAFRWNRQTDGAWLGIWGDCVARLCMNNSGLLEWSAPKEIAEHMAAALPRYLALDVDYAALTDALPWRSDPPLAACLDAWRGLRLLRQPFGETLLCFLCSATKQIVQIKQMVELLAARFGTPICRAGSPAVSLPAVSSSNRSNRPNPAGLGEGRLGASLVERVDLNALDALAVKRVPLHRLPTWPELAAARETDLRACALGFRARFISQTAQFLAAHPGWLDETERLPYAAAKERLCLLPGVGEKIADCVLLFGAGRYEAFPVDVWIVKAMARCYNLEGWTPAQIAHFGRVHFGVGAGLAQQYLFASERAAGRKSLSRNT

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
17 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
20 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
21 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
22 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
36 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
37 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
38 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
39 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
40 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
41 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
44 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
45 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
46 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
47 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
48 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
49 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
50 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
51 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
52 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
55 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
65 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
66 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
67 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
68 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
69 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
78 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
79 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
82 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
83 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
84 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
85 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
86 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
87 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
97 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
98 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
101 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.55
Rhizosphere 95.6
Stem 0
Stem Tuber 0
Unclassified 3.85

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10023934 3300003320 Bacteria 11461
2 rootH2_10117156 3300003320 Bacteria 5824
3 rootL2_10043397 3300003322 Bacteria 11669
4 rootH1_10048568 3300003323 Bacteria 13661
5 rootH1_10060084 3300003323 Bacteria 8904
6 rootH1_10233239 3300003323 Bacteria 3195
7 Ga0070658_10119064 3300005327 Bacteria 2193
8 Ga0070683_100012341 3300005329 Bacteria 7423
9 Ga0070680_100353379 3300005336 Bacteria 1250
10 Ga0068868_100024223 3300005338 Bacteria 4603
11 Ga0070689_100287096 3300005340 Bacteria 1366
12 Ga0070714_100005307 3300005435 Bacteria 9821
13 Ga0070713_100266535 3300005436 Bacteria 1567
14 Ga0070711_100002009 3300005439 Bacteria 11454
15 Ga0070711_100195635 3300005439 Unclassified 1557
16 Ga0070681_10129768 3300005458 Bacteria 2453
17 Ga0068855_100042027 3300005563 Bacteria 5417
18 Ga0068855_100059054 3300005563 Unclassified 4489
19 Ga0068857_100006938 3300005577 Bacteria 9747
20 Ga0068856_100027870 3300005614 Bacteria 5511
21 Ga0068871_100105649 3300006358 Bacteria 2363
22 Ga0099794_10116069 3300007265 Bacteria 1344
23 Ga0105240_10001485 3300009093 Bacteria 39911
24 Ga0105240_10235472 3300009093 Bacteria 2125
25 Ga0105240_10246856 3300009093 Bacteria 2067
26 Ga0105238_10051530 3300009551 Unclassified 4140
27 Ga0157378_10377178 3300013297 Bacteria 1392
28 Ga0163163_10352044 3300014325 Bacteria 1529
29 Ga0207705_10093048 3300025909 Bacteria 2210
30 Ga0207707_10189285 3300025912 Unclassified 1795
31 Ga0207695_10260057 3300025913 Unclassified 1633
32 Ga0207663_10179222 3300025916 Bacteria 1512
33 Ga0207652_10260704 3300025921 Bacteria 1563
34 Ga0207694_10005187 3300025924 Bacteria 10061
35 Ga0207700_10004091 3300025928 Bacteria 8555
36 Ga0207664_10001543 3300025929 Bacteria 15091
37 Ga0207670_10240646 3300025936 Bacteria 1394
38 Ga0207667_10068385 3300025949 Unclassified 3699
39 Ga0207702_10000121 3300026078 Bacteria 91718
40 Ga0207702_10019439 3300026078 Bacteria 5620
41 Ga0207702_10328379 3300026078 Bacteria 1458
42 Ga0207676_10155378 3300026095 Bacteria 1976
43 Ga0207674_10067788 3300026116 Unclassified 3592
44 Ga0265337_1003392 3300028556 Bacteria 6924
45 Ga0265337_1003398 3300028556 Bacteria 6912
46 Ga0265337_1030388 3300028556 Bacteria 1609
47 Ga0265326_10003466 3300028558 Bacteria 5159
48 Ga0265326_10025042 3300028558 Bacteria 1702
49 Ga0265319_1006331 3300028563 Bacteria 5497
50 Ga0265319_1007961 3300028563 Unclassified 4698
51 Ga0265319_1018704 3300028563 Unclassified 2603
52 Ga0265319_1025532 3300028563 Bacteria 2114
53 Ga0265319_1028050 3300028563 Unclassified 1989
54 Ga0265334_10002620 3300028573 Bacteria 8376
55 Ga0265334_10071030 3300028573 Unclassified 1297
56 Ga0265318_10000038 3300028577 Bacteria 136367
57 Ga0265318_10012758 3300028577 Bacteria 3565
58 Ga0265318_10038689 3300028577 Bacteria 1822
59 Ga0265323_10000003 3300028653 Bacteria 200487
60 Ga0265323_10001966 3300028653 Bacteria 9682
61 Ga0265323_10004181 3300028653 Bacteria 6249
62 Ga0265323_10005589 3300028653 Bacteria 5334
63 Ga0265323_10010438 3300028653 Bacteria 3767
64 Ga0265323_10013053 3300028653 Bacteria 3322
65 Ga0265323_10024806 3300028653 Bacteria 2277
66 Ga0265323_10040258 3300028653 Bacteria 1700
67 Ga0265322_10000331 3300028654 Bacteria 19897
68 Ga0265322_10002775 3300028654 Bacteria 5348
69 Ga0265338_10000016 3300028800 Bacteria 347424
70 Ga0265338_10000591 3300028800 Bacteria 63954
71 Ga0265338_10001696 3300028800 Bacteria 34994
72 Ga0265338_10004067 3300028800 Bacteria 20050
73 Ga0265338_10007484 3300028800 Bacteria 13531
74 Ga0265338_10008405 3300028800 Bacteria 12538
75 Ga0265338_10008591 3300028800 Bacteria 12357
76 Ga0265338_10008815 3300028800 Bacteria 12171
77 Ga0265338_10057357 3300028800 Bacteria 3446
78 Ga0265338_10080931 3300028800 Bacteria 2726
79 Ga0265338_10282507 3300028800 Bacteria 1212
80 Ga0265324_10004083 3300029957 Bacteria 6707
81 Ga0265324_10005286 3300029957 Bacteria 5604
82 Ga0265324_10021704 3300029957 Bacteria 2300
83 Ga0265330_10007050 3300031235 Bacteria 5512
84 Ga0265330_10008465 3300031235 Bacteria 4950
85 Ga0265330_10008819 3300031235 Bacteria 4827
86 Ga0265330_10010311 3300031235 Bacteria 4409
87 Ga0265330_10080180 3300031235 Unclassified 1407
88 Ga0265332_10092361 3300031238 Bacteria 1279
89 Ga0265328_10052828 3300031239 Bacteria 1491
90 Ga0265320_10001400 3300031240 Bacteria 17527
91 Ga0265320_10003131 3300031240 Bacteria 11226
92 Ga0265320_10003442 3300031240 Bacteria 10645
93 Ga0265320_10026119 3300031240 Bacteria 3061
94 Ga0265320_10046574 3300031240 Bacteria 2124
95 Ga0265325_10002748 3300031241 Bacteria 11754
96 Ga0265325_10159113 3300031241 Bacteria 1064
97 Ga0265339_10007863 3300031249 Bacteria 6842
98 Ga0265339_10060427 3300031249 Bacteria 2043
99 Ga0265331_10051028 3300031250 Bacteria 1982
100 Ga0265327_10000305 3300031251 Bacteria 95294
101 Ga0265327_10023750 3300031251 Bacteria 3620
102 Ga0265327_10058201 3300031251 Bacteria 1984
103 Ga0265327_10119593 3300031251 Bacteria 1250
104 Ga0265327_10125770 3300031251 Unclassified 1210
105 Ga0265316_10023263 3300031344 Bacteria 5209
106 Ga0265316_10026097 3300031344 Bacteria 4867
107 Ga0265316_10030461 3300031344 Bacteria 4422
108 Ga0265316_10031554 3300031344 Bacteria 4330
109 Ga0265316_10073457 3300031344 Bacteria 2634
110 Ga0265316_10074001 3300031344 Bacteria 2623
111 Ga0265316_10167123 3300031344 Unclassified 1642
112 Ga0307408_100000003 3300031548 Bacteria 618438
113 Ga0265313_10001250 3300031595 Bacteria 24196
114 Ga0265313_10001329 3300031595 Bacteria 23270
115 Ga0307508_10000026 3300031616 Bacteria 171622
116 Ga0265314_10001529 3300031711 Bacteria 25510
117 Ga0265314_10091852 3300031711 Unclassified 1974
118 Ga0265314_10179514 3300031711 Bacteria 1270
119 Ga0265342_10007171 3300031712 Bacteria 8205
120 Ga0265342_10039732 3300031712 Bacteria 2856
121 Ga0265342_10040887 3300031712 Bacteria 2809
122 Ga0265342_10066036 3300031712 Bacteria 2119
123 Ga0307405_10369608 3300031731 Bacteria 1113
124 Ga0307410_10000009 3300031852 Bacteria 91471
125 Ga0307407_10001216 3300031903 Bacteria 9129
126 Ga0307412_10123658 3300031911 Bacteria 1867
127 Ga0307409_100000078 3300031995 Bacteria 34924
128 Ga0307416_100000070 3300032002 Bacteria 83644
129 Ga0316580_10078390 3300032139 Unclassified 1011
130 Ga0373953_0033609 3300035117 Bacteria 2007
131 Ga0373955_0124667 3300035172 Bacteria 1500
132 Ga0373935_0056316 3300035692 Bacteria 2506
133 Ga0373927_0015275 3300035695 Bacteria 5072
134 Ga0373927_0128511 3300035695 Bacteria 1655
135 Ga0373937_0012510 3300036401 Bacteria 7468
136 Ga0373925_0020727 3300037068 Bacteria 4789
137 Ga0395905_0000016 3300037471 Bacteria 382308
138 Ga0395905_0052718 3300037471 Bacteria 3808
139 Ga0451577_0000326 3300042876 Bacteria 88726
140 Ga0453684_0188649 3300044712 Bacteria 2413
141 Ga0451576_0030614 3300045051 Bacteria 5751
142 Ga0451576_0090749 3300045051 Unclassified 3178
143 Ga0451576_0505941 3300045051 Unclassified 1269
144 Ga0466967_0047131 3300045976 Bacteria 3756
145 Ga0495629_0089278 3300046459 Bacteria 2150
146 Ga0495630_0010730 3300046517 Bacteria 6615
147 Ga0495630_0226132 3300046517 Bacteria 1429
148 Ga0495640_0069306 3300046533 Bacteria 2372
149 Ga0495586_0009686 3300046535 Bacteria 5129
150 Ga0495645_0364020 3300046543 Bacteria 929
151 Ga0495667_0042948 3300046559 Unclassified 2997
152 Ga0495667_0061844 3300046559 Bacteria 2454
153 Ga0495634_0001228 3300046642 Bacteria 23599
154 Ga0495635_0035182 3300046663 Unclassified 3473
155 Ga0495599_0061888 3300046678 Bacteria 2338
156 Ga0495613_0001467 3300046689 Bacteria 17946
157 Ga0495680_0233214 3300047322 Bacteria 1310
158 Ga0495680_0295574 3300047322 Unclassified 1138
159 Ga0496115_0003043 3300048918 Bacteria 12031
160 Ga0501031_0227339 3300049568 Unclassified 1214
161 Ga0501032_0000671 3300049569 Bacteria 27788
162 Ga0501032_0012027 3300049569 Bacteria 6196
163 Ga0501033_0044832 3300049570 Bacteria 3291
164 Ga0501034_0023699 3300049571 Bacteria 6251
165 Ga0501034_0114974 3300049571 Archaea 2679
166 Ga0501038_0004157 3300049574 Bacteria 13461
167 Ga0501039_0061960 3300049575 Unclassified 2897
168 Ga0501043_0035932 3300049579 Bacteria 3898
169 Ga0501043_0173515 3300049579 Unclassified 1681
170 Ga0501048_0069643 3300049582 Archaea 2484
171 Ga0501068_0113544 3300049584 Bacteria 1686
172 Ga0501070_0416823 3300049586 Unclassified 1085
173 Ga0501243_000899 3300049675 Bacteria 4161
174 Ga0501080_0164069 3300049742 Bacteria 2051
175 Ga0501083_0000566 3300049744 Bacteria 23672
176 Ga0501083_0006446 3300049744 Bacteria 8325
177 Ga0501083_0106354 3300049744 Unclassified 1847
178 Ga0501035_0006991 3300049822 Bacteria 10540
179 Ga0501035_0305440 3300049822 Archaea 1339
180 Ga0501044_0001987 3300049823 Bacteria 23628
181 Ga0501044_0003470 3300049823 Bacteria 17763
182 Ga0501044_0143129 3300049823 Archaea 2378

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025913 Ga0207695_10260057 Ga0207695_102600572 269
2 3300031852 Ga0307410_10000009 Ga0307410_1000000964 271
3 3300031995 Ga0307409_100000078 Ga0307409_1000000788 271
4 3300047322 Ga0495680_0295574 Ga0495680_0295574_30_908 271
5 3300049569 Ga0501032_0012027 Ga0501032_0012027_3545_4453 271
6 3300049579 Ga0501043_0035932 Ga0501043_0035932_2917_3825 271
7 3300049822 Ga0501035_0006991 Ga0501035_0006991_4395_5303 271
8 3300049823 Ga0501044_0001987 Ga0501044_0001987_4555_5463 271
9 3300005458 Ga0070681_10129768 Ga0070681_101297682 272
10 3300025921 Ga0207652_10260704 Ga0207652_102607042 272
11 3300028573 Ga0265334_10071030 Ga0265334_100710302 272
12 3300028800 Ga0265338_10007484 Ga0265338_100074847 272
13 3300031241 Ga0265325_10159113 Ga0265325_101591132 272
14 3300028800 Ga0265338_10001696 Ga0265338_100016968 273
15 3300049586 Ga0501070_0416823 Ga0501070_0416823_53_910 273
16 3300003320 rootH2_10117156 rootH2_101171562 274
17 3300005340 Ga0070689_100287096 Ga0070689_1002870962 274
18 3300009551 Ga0105238_10051530 Ga0105238_100515302 274
19 3300014325 Ga0163163_10352044 Ga0163163_103520442 274
20 3300025936 Ga0207670_10240646 Ga0207670_102406462 274
21 3300026095 Ga0207676_10155378 Ga0207676_101553783 274
22 3300028556 Ga0265337_1003398 Ga0265337_10033984 274
23 3300028558 Ga0265326_10003466 Ga0265326_100034662 274
24 3300028800 Ga0265338_10000591 Ga0265338_1000059120 274
25 3300035692 Ga0373935_0056316 Ga0373935_0056316_1143_2069 274
26 3300035695 Ga0373927_0015275 Ga0373927_0015275_1576_2502 274
27 3300037068 Ga0373925_0020727 Ga0373925_0020727_1851_2777 274
28 3300045051 Ga0451576_0090749 Ga0451576_0090749_2134_3015 274
29 3300045051 Ga0451576_0505941 Ga0451576_0505941_28_975 274
30 3300046517 Ga0495630_0010730 Ga0495630_0010730_5036_5962 274
31 3300046678 Ga0495599_0061888 Ga0495599_0061888_1399_2259 274
32 3300025949 Ga0207667_10068385 Ga0207667_100683854 275
33 3300028556 Ga0265337_1030388 Ga0265337_10303882 275
34 3300031240 Ga0265320_10026119 Ga0265320_100261193 275
35 3300046517 Ga0495630_0226132 Ga0495630_0226132_59_952 275
36 3300046559 Ga0495667_0042948 Ga0495667_0042948_163_1056 275
37 3300047322 Ga0495680_0233214 Ga0495680_0233214_93_986 275
38 3300049744 Ga0501083_0000566 Ga0501083_0000566_4367_5275 275
39 3300049744 Ga0501083_0006446 Ga0501083_0006446_1992_2903 275
40 3300003323 rootH1_10233239 rootH1_102332392 276
41 3300005436 Ga0070713_100266535 Ga0070713_1002665352 276
42 3300005563 Ga0068855_100042027 Ga0068855_1000420275 276
43 3300009093 Ga0105240_10235472 Ga0105240_102354722 276
44 3300009093 Ga0105240_10246856 Ga0105240_102468561 276
45 3300013297 Ga0157378_10377178 Ga0157378_103771782 276
46 3300028577 Ga0265318_10000038 Ga0265318_1000003816 276
47 3300028800 Ga0265338_10000016 Ga0265338_10000016285 276
48 3300028800 Ga0265338_10008405 Ga0265338_100084054 276
49 3300028800 Ga0265338_10008815 Ga0265338_100088159 276
50 3300029957 Ga0265324_10004083 Ga0265324_100040835 276
51 3300029957 Ga0265324_10021704 Ga0265324_100217043 276
52 3300031239 Ga0265328_10052828 Ga0265328_100528281 276
53 3300031240 Ga0265320_10003442 Ga0265320_100034422 276
54 3300031240 Ga0265320_10046574 Ga0265320_100465742 276
55 3300031241 Ga0265325_10002748 Ga0265325_100027483 276
56 3300031249 Ga0265339_10007863 Ga0265339_100078633 276
57 3300031344 Ga0265316_10167123 Ga0265316_101671232 276
58 3300031595 Ga0265313_10001250 Ga0265313_1000125023 276
59 3300031595 Ga0265313_10001329 Ga0265313_1000132918 276
60 3300031711 Ga0265314_10001529 Ga0265314_1000152917 276
61 3300031711 Ga0265314_10091852 Ga0265314_100918522 276
62 3300035117 Ga0373953_0033609 Ga0373953_0033609_424_1395 276
63 3300035172 Ga0373955_0124667 Ga0373955_0124667_160_1131 276
64 3300036401 Ga0373937_0012510 Ga0373937_0012510_3331_4302 276
65 3300046459 Ga0495629_0089278 Ga0495629_0089278_555_1526 276
66 3300046533 Ga0495640_0069306 Ga0495640_0069306_577_1548 276
67 3300046535 Ga0495586_0009686 Ga0495586_0009686_2773_3744 276
68 3300046559 Ga0495667_0061844 Ga0495667_0061844_183_1154 276
69 3300046642 Ga0495634_0001228 Ga0495634_0001228_9962_10933 276
70 3300046663 Ga0495635_0035182 Ga0495635_0035182_2363_3334 276
71 3300046689 Ga0495613_0001467 Ga0495613_0001467_12486_13457 276
72 3300028556 Ga0265337_1003392 Ga0265337_10033922 277
73 3300028563 Ga0265319_1007961 Ga0265319_10079613 277
74 3300028577 Ga0265318_10012758 Ga0265318_100127583 277
75 3300028800 Ga0265338_10057357 Ga0265338_100573572 277
76 3300028800 Ga0265338_10080931 Ga0265338_100809313 277
77 3300031240 Ga0265320_10001400 Ga0265320_100014009 277
78 3300042876 Ga0451577_0000326 Ga0451577_0000326_80026_81000 277
79 3300005563 Ga0068855_100059054 Ga0068855_1000590544 278
80 3300029957 Ga0265324_10005286 Ga0265324_100052864 278
81 3300046543 Ga0495645_0364020 Ga0495645_0364020_21_908 278
82 3300005439 Ga0070711_100002009 Ga0070711_10000200912 280
83 3300025916 Ga0207663_10179222 Ga0207663_101792222 280
84 3300007265 Ga0099794_10116069 Ga0099794_101160692 281
85 3300005336 Ga0070680_100353379 Ga0070680_1003533791 283
86 3300005435 Ga0070714_100005307 Ga0070714_1000053075 283
87 3300009093 Ga0105240_10001485 Ga0105240_1000148524 283
88 3300025912 Ga0207707_10189285 Ga0207707_101892852 283
89 3300025924 Ga0207694_10005187 Ga0207694_1000518710 283
90 3300025929 Ga0207664_10001543 Ga0207664_1000154311 283
91 3300048918 Ga0496115_0003043 Ga0496115_0003043_1707_2624 283
92 3300049675 Ga0501243_000899 Ga0501243_000899_2580_3476 283
93 3300005577 Ga0068857_100006938 Ga0068857_1000069387 285
94 3300026116 Ga0207674_10067788 Ga0207674_100677882 285
95 3300028800 Ga0265338_10004067 Ga0265338_1000406716 286
96 3300031240 Ga0265320_10003131 Ga0265320_100031312 286
97 3300031616 Ga0307508_10000026 Ga0307508_10000026129 286
98 3300028563 Ga0265319_1018704 Ga0265319_10187042 287
99 3300028800 Ga0265338_10282507 Ga0265338_102825072 287
100 3300003322 rootL2_10043397 rootL2_100433976 288
101 3300049571 Ga0501034_0023699 Ga0501034_0023699_1081_2007 288
102 3300028653 Ga0265323_10024806 Ga0265323_100248061 289
103 3300031235 Ga0265330_10008465 Ga0265330_100084652 289
104 3300005439 Ga0070711_100195635 Ga0070711_1001956352 290
105 3300006358 Ga0068871_100105649 Ga0068871_1001056492 290
106 3300026078 Ga0207702_10019439 Ga0207702_100194396 290
107 3300028653 Ga0265323_10010438 Ga0265323_100104385 290
108 3300028653 Ga0265323_10013053 Ga0265323_100130533 290
109 3300031235 Ga0265330_10008819 Ga0265330_100088192 290
110 3300031235 Ga0265330_10010311 Ga0265330_100103115 290
111 3300031235 Ga0265330_10080180 Ga0265330_100801801 290
112 3300031344 Ga0265316_10026097 Ga0265316_100260974 290
113 3300031712 Ga0265342_10040887 Ga0265342_100408872 290
114 3300025928 Ga0207700_10004091 Ga0207700_100040916 291
115 3300028563 Ga0265319_1006331 Ga0265319_10063312 291
116 3300037471 Ga0395905_0000016 Ga0395905_0000016_192989_193897 291
117 3300005327 Ga0070658_10119064 Ga0070658_101190643 292
118 3300005338 Ga0068868_100024223 Ga0068868_1000242234 292
119 3300025909 Ga0207705_10093048 Ga0207705_100930483 292
120 3300031251 Ga0265327_10023750 Ga0265327_100237504 292
121 3300028558 Ga0265326_10025042 Ga0265326_100250422 293
122 3300028563 Ga0265319_1025532 Ga0265319_10255323 293
123 3300028573 Ga0265334_10002620 Ga0265334_100026206 293
124 3300028577 Ga0265318_10038689 Ga0265318_100386892 293
125 3300028653 Ga0265323_10001966 Ga0265323_100019666 293
126 3300028653 Ga0265323_10040258 Ga0265323_100402582 293
127 3300028654 Ga0265322_10000331 Ga0265322_1000033115 293
128 3300028800 Ga0265338_10008591 Ga0265338_100085914 293
129 3300031238 Ga0265332_10092361 Ga0265332_100923612 293
130 3300031249 Ga0265339_10060427 Ga0265339_100604273 293
131 3300031251 Ga0265327_10119593 Ga0265327_101195932 293
132 3300031344 Ga0265316_10030461 Ga0265316_100304614 293
133 3300031712 Ga0265342_10007171 Ga0265342_100071718 293
134 3300028563 Ga0265319_1028050 Ga0265319_10280503 294
135 3300028653 Ga0265323_10004181 Ga0265323_100041812 294
136 3300028653 Ga0265323_10005589 Ga0265323_100055892 294
137 3300031250 Ga0265331_10051028 Ga0265331_100510282 294
138 3300031251 Ga0265327_10058201 Ga0265327_100582012 294
139 3300031251 Ga0265327_10125770 Ga0265327_101257701 294
140 3300031344 Ga0265316_10023263 Ga0265316_100232634 294
141 3300031344 Ga0265316_10073457 Ga0265316_100734574 294
142 3300031548 Ga0307408_100000003 Ga0307408_100000003521 294
143 3300031711 Ga0265314_10179514 Ga0265314_101795142 294
144 3300031731 Ga0307405_10369608 Ga0307405_103696081 294
145 3300031903 Ga0307407_10001216 Ga0307407_100012162 294
146 3300031911 Ga0307412_10123658 Ga0307412_101236582 294
147 3300032002 Ga0307416_100000070 Ga0307416_10000007028 294
148 3300005614 Ga0068856_100027870 Ga0068856_1000278703 295
149 3300026078 Ga0207702_10000121 Ga0207702_1000012135 295
150 3300032139 Ga0316580_10078390 Ga0316580_100783901 295
151 3300044712 Ga0453684_0188649 Ga0453684_0188649_1256_2164 295
152 3300003320 rootH2_10023934 rootH2_100239346 296
153 3300003323 rootH1_10048568 rootH1_1004856813 296
154 3300003323 rootH1_10060084 rootH1_1006008410 296
155 3300005329 Ga0070683_100012341 Ga0070683_1000123416 296
156 3300026078 Ga0207702_10328379 Ga0207702_103283792 296
157 3300028653 Ga0265323_10000003 Ga0265323_1000000383 296
158 3300028654 Ga0265322_10002775 Ga0265322_100027751 296
159 3300031235 Ga0265330_10007050 Ga0265330_100070503 296
160 3300031251 Ga0265327_10000305 Ga0265327_1000030545 296
161 3300031344 Ga0265316_10031554 Ga0265316_100315544 296
162 3300031344 Ga0265316_10074001 Ga0265316_100740012 296
163 3300031712 Ga0265342_10039732 Ga0265342_100397321 296
164 3300031712 Ga0265342_10066036 Ga0265342_100660363 296
165 3300035695 Ga0373927_0128511 Ga0373927_0128511_222_1181 296
166 3300037471 Ga0395905_0052718 Ga0395905_0052718_1044_2027 296
167 3300045051 Ga0451576_0030614 Ga0451576_0030614_936_1922 296
168 3300045976 Ga0466967_0047131 Ga0466967_0047131_968_1858 296
169 3300049568 Ga0501031_0227339 Ga0501031_0227339_186_1097 296
170 3300049569 Ga0501032_0000671 Ga0501032_0000671_12929_13840 296
171 3300049570 Ga0501033_0044832 Ga0501033_0044832_2200_3111 296
172 3300049571 Ga0501034_0114974 Ga0501034_0114974_1279_2190 296
173 3300049574 Ga0501038_0004157 Ga0501038_0004157_12398_13309 296
174 3300049575 Ga0501039_0061960 Ga0501039_0061960_1807_2718 296
175 3300049579 Ga0501043_0173515 Ga0501043_0173515_153_1064 296
176 3300049582 Ga0501048_0069643 Ga0501048_0069643_1421_2332 296
177 3300049584 Ga0501068_0113544 Ga0501068_0113544_765_1676 296
178 3300049742 Ga0501080_0164069 Ga0501080_0164069_11_922 296
179 3300049744 Ga0501083_0106354 Ga0501083_0106354_768_1679 296
180 3300049822 Ga0501035_0305440 Ga0501035_0305440_248_1159 296
181 3300049823 Ga0501044_0003470 Ga0501044_0003470_1860_2852 296
182 3300049823 Ga0501044_0143129 Ga0501044_0143129_1426_2337 296

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07934

OGG_N

8-oxoguanine DNA glycosylase, N-terminal domain

33

143

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ejz-assembly2.cif.gz_B structure of mbogg1 in complex with low affinity dna ligand 0.9076 17 294
7pz1-assembly1.cif.gz_AAA structure of the mouse 8-oxoguanine dna glycosylase mogg1 in complex with ligand th8535 0.8785 13 291
7ayy-assembly3.cif.gz_CCC structure of the human 8-oxoguanine dna glycosylase hogg1 in complex with activator th10785 0.8758 13 291
1n39-assembly1.cif.gz_A structural and biochemical exploration of a critical amino acid in human 8-oxoguanine glycosylase 0.8748 13 293
7z3y-assembly1.cif.gz_AAA structure of the mouse 8-oxoguanine dna glycosylase mogg1 in complex with ligand th013545 0.8732 13 291
ID Description Score Start End Superfamily
4ejzB02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9231 123 239 1.10.340.30
6g40C03 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9212 123 234 1.10.340.30
1ebmA03 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9078 125 238 1.10.340.30
af_P53397_121_251_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9005 123 234 1.10.340.30
4ejyA03 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.8966 241 294 1.10.1670.10
ID Description Score Start End GO Terms
AF-A0A351HDR2-F1-model_v4 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9653 9 251 GO:0003684
GO:0006284
GO:0006289
GO:0008534
GO:0016829
AF-A0A290QHR7-F1-model_v4 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9627 8 295 GO:0003684
GO:0006284
GO:0006289
GO:0008534
GO:0016829
AF-A0A351HDR2-F1-model_v4 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9576 9 251 GO:0003684
GO:0006284
GO:0006289
GO:0008534
GO:0016829
AF-A0A350R086-F1-model_v4 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9559 11 292 GO:0003684
GO:0006284
GO:0006289
GO:0008534
GO:0016829
AF-A0A2A2QB84-F1-model_v4 DNA-(apurinic or apyrimidinic site) lyase (EC 4.2.99.18) 0.9546 1 293 GO:0003684
GO:0006284
GO:0006289
GO:0008534
GO:0016829

Feature Viewer

pLDDT pTM Quality
92.68 0.91 High
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Predicted Structure (AlphaFold2)

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