F278609

General Info

Members Datasets Scaffolds Average Seq Length
182 147 364 263

Family's Representative Sequence

Representative Sequence 3300005354|Ga0070675_100499602|Ga0070675_1004996022
Length 280
Sequence VTYTGRGDAETRNASDLLWNCWHHGRRLATIPEEIRPRTREDGYAVQARLEERTASPLFGWKIAATSVAGQKHINVTGPLAGRLLREKVVDLSEPGHGGAEFEFGVNHMKVAEAEFAFRIARDLPPRSQPYSVDEVLAAVDALHPAIEVPDSRFDDFTIVGAPSLIADNACAHQFVLGPAAKADWRSLDLVEHTAIGTVAVVSASSRTGELTREGKGANVLGDPRVALAWLANELSGLGLTLKAGEVVTTGTCLVPLPIQRGSTIDMDFGVLGRVSARMV

Samples

Sample ID Description Type Environment
1 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
17 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
39 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
103 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
104 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
105 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
106 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
107 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
108 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
109 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
110 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
111 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
112 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
126 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
127 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
128 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
133 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
134 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
135 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
136 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
137 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
138 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
139 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
140 2824696289 Bradyrhizobium sp. HAMBI 2127 Isolate Unclassified
141 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
142 2849076700 Bradyrhizobium symbiodeficiens 85S1MB Isolate Nodule
143 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
144 2908756301 Bradyrhizobium ivorense CI-41S Isolate Nodule
145 2935608549 Bradyrhizobium sp. RT6a Isolate Nodule
146 2935819856 Bradyrhizobium sp. RT3b Isolate Nodule
147 2935847175 Bradyrhizobium sp. RT5a Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.41
Metatranscriptomes 0
Isolates 6.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.95
Nodule 5.49
Rhizoplane 0
Rhizosphere 86.81
Stem 0
Stem Tuber 0
Unclassified 17.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070675_100499602 3300005354 Unclassified 1096
2 JGI25153J46596_10003418 3300003215 Bacteria 8884
3 Ga0065712_10252321 3300005290 Bacteria 957
4 Ga0065715_10015094 3300005293 Bacteria 2875
5 Ga0065715_10142183 3300005293 Unclassified 1837
6 Ga0065707_10004048 3300005295 Bacteria 6236
7 Ga0070676_10442818 3300005328 Unclassified 912
8 Ga0070690_100006593 3300005330 Bacteria 6597
9 Ga0070670_100002953 3300005331 Bacteria 14090
10 Ga0070670_100014509 3300005331 Bacteria 6764
11 Ga0070670_100204904 3300005331 Bacteria 1714
12 Ga0070666_10106920 3300005335 Bacteria 1933
13 Ga0068868_100325094 3300005338 Bacteria 1311
14 Ga0068868_100375585 3300005338 Bacteria 1222
15 Ga0070689_100072582 3300005340 Unclassified 2690
16 Ga0070661_100246292 3300005344 Bacteria 1378
17 Ga0070669_100019748 3300005353 Bacteria 4814
18 Ga0070669_100421322 3300005353 Bacteria 1096
19 Ga0070675_100055801 3300005354 Unclassified 3253
20 Ga0070675_100123198 3300005354 Bacteria 2204
21 Ga0070671_100066437 3300005355 Unclassified 3006
22 Ga0070674_100049062 3300005356 Bacteria 2901
23 Ga0070673_100074021 3300005364 Unclassified 2743
24 Ga0070688_100021394 3300005365 Unclassified 3778
25 Ga0070659_100484355 3300005366 Bacteria 1053
26 Ga0070713_100006874 3300005436 Bacteria 7932
27 Ga0070701_10092890 3300005438 Bacteria 1657
28 Ga0070663_100007304 3300005455 Bacteria 6716
29 Ga0070663_100456286 3300005455 Unclassified 1054
30 Ga0070662_100078757 3300005457 Unclassified 2449
31 Ga0070685_10035157 3300005466 Bacteria 2826
32 Ga0070706_100227090 3300005467 Bacteria 1743
33 Ga0070707_100607496 3300005468 Bacteria 1056
34 Ga0070672_100034353 3300005543 Bacteria 3848
35 Ga0070672_100071621 3300005543 Bacteria 2758
36 Ga0070686_100047000 3300005544 Unclassified 2727
37 Ga0070686_100454671 3300005544 Bacteria 985
38 Ga0070696_100108922 3300005546 Bacteria 1993
39 Ga0070665_100032443 3300005548 Bacteria 5256
40 Ga0070664_100252026 3300005564 Bacteria 1587
41 Ga0068859_100007843 3300005617 Bacteria 10834
42 Ga0068859_100784017 3300005617 Unclassified 1041
43 Ga0068864_100023105 3300005618 Bacteria 5221
44 Ga0068861_100161019 3300005719 Bacteria 1851
45 Ga0068858_100227166 3300005842 Bacteria 1769
46 Ga0068860_100447371 3300005843 Bacteria 1284
47 Ga0081539_10018290 3300005985 Bacteria 4870
48 Ga0070717_10000379 3300006028 Bacteria 28424
49 Ga0075368_10015953 3300006042 Bacteria 2792
50 Ga0075368_10023734 3300006042 Bacteria 2345
51 Ga0070716_100155943 3300006173 Bacteria 1474
52 Ga0070712_100108180 3300006175 Bacteria 2070
53 Ga0075370_10065786 3300006353 Bacteria 2067
54 Ga0075428_100000023 3300006844 Bacteria 127355
55 Ga0075431_100042643 3300006847 Unclassified 4681
56 Ga0075431_100175437 3300006847 Bacteria 2202
57 Ga0075433_10281567 3300006852 Bacteria 1473
58 Ga0097620_100007843 3300006931 Bacteria 10834
59 Ga0097620_100784010 3300006931 Unclassified 1041
60 Ga0075435_100270158 3300007076 Bacteria 1450
61 Ga0111539_10000001 3300009094 Bacteria 1035431
62 Ga0111539_10001572 3300009094 Bacteria 30382
63 Ga0105245_10449481 3300009098 Bacteria 1297
64 Ga0105247_10029432 3300009101 Bacteria 3328
65 Ga0114129_10056288 3300009147 Bacteria 5509
66 Ga0105248_10111836 3300009177 Bacteria 3080
67 Ga0105248_10561789 3300009177 Bacteria 1287
68 Ga0105237_10400645 3300009545 Bacteria 1377
69 Ga0105238_10004289 3300009551 Bacteria 14154
70 Ga0105249_10178113 3300009553 Bacteria 2066
71 Ga0105249_10691952 3300009553 Bacteria 1079
72 Ga0157375_10552849 3300013308 Bacteria 1313
73 Ga0157375_10775519 3300013308 Unclassified 1109
74 Ga0163163_10118599 3300014325 Unclassified 2679
75 Ga0157377_10255402 3300014745 Bacteria 1138
76 Ga0207656_10026828 3300025321 Bacteria 2352
77 Ga0207682_10026334 3300025893 Bacteria 2311
78 Ga0207680_10316142 3300025903 Bacteria 1091
79 Ga0207643_10181765 3300025908 Bacteria 1273
80 Ga0207671_10018825 3300025914 Bacteria 5291
81 Ga0207693_10341249 3300025915 Bacteria 1172
82 Ga0207662_10129399 3300025918 Bacteria 1590
83 Ga0207646_10440862 3300025922 Bacteria 1175
84 Ga0207681_10093068 3300025923 Bacteria 2157
85 Ga0207681_10123980 3300025923 Unclassified 1899
86 Ga0207694_10015560 3300025924 Bacteria 5736
87 Ga0207650_10008893 3300025925 Bacteria 6862
88 Ga0207650_10301248 3300025925 Bacteria 1309
89 Ga0207700_10008018 3300025928 Bacteria 6511
90 Ga0207664_10044473 3300025929 Bacteria 3478
91 Ga0207644_10008056 3300025931 Bacteria 6894
92 Ga0207644_10334596 3300025931 Unclassified 1227
93 Ga0207706_10079746 3300025933 Unclassified 2879
94 Ga0207670_10071579 3300025936 Unclassified 2398
95 Ga0207691_10039289 3300025940 Bacteria 4377
96 Ga0207691_10086774 3300025940 Bacteria 2808
97 Ga0207691_10110238 3300025940 Bacteria 2448
98 Ga0207711_10274784 3300025941 Unclassified 1551
99 Ga0207689_10179061 3300025942 Bacteria 1748
100 Ga0207661_10359127 3300025944 Bacteria 1316
101 Ga0207679_10039421 3300025945 Bacteria 3373
102 Ga0207679_10179995 3300025945 Unclassified 1748
103 Ga0207651_10074255 3300025960 Unclassified 2421
104 Ga0207651_10114058 3300025960 Bacteria 2035
105 Ga0207651_10290769 3300025960 Bacteria 1355
106 Ga0207640_10454034 3300025981 Bacteria 1057
107 Ga0207658_10213240 3300025986 Bacteria 1620
108 Ga0207703_10098399 3300026035 Unclassified 2474
109 Ga0207678_10046626 3300026067 Bacteria 3747
110 Ga0207678_10269408 3300026067 Unclassified 1460
111 Ga0207708_10052020 3300026075 Bacteria 3119
112 Ga0207641_10434046 3300026088 Bacteria 1267
113 Ga0207676_10187391 3300026095 Bacteria 1817
114 Ga0207675_100123289 3300026118 Bacteria 2453
115 Ga0207683_10021050 3300026121 Bacteria 5581
116 Ga0207683_10177926 3300026121 Bacteria 1928
117 Ga0207428_10000002 3300027907 Bacteria 854851
118 Ga0268266_10063185 3300028379 Bacteria 3196
119 Ga0268266_10379324 3300028379 Bacteria 1333
120 Ga0268265_10164111 3300028380 Bacteria 1891
121 Ga0307408_100021666 3300031548 Unclassified 4353
122 Ga0307405_10008620 3300031731 Bacteria 5181
123 Ga0307413_10222760 3300031824 Bacteria 1379
124 Ga0307410_10026861 3300031852 Bacteria 3630
125 Ga0307410_10256000 3300031852 Bacteria 1363
126 Ga0307410_10467541 3300031852 Unclassified 1032
127 Ga0307407_10024521 3300031903 Bacteria 3165
128 Ga0307412_10001169 3300031911 Bacteria 15017
129 Ga0307409_100243403 3300031995 Bacteria 1639
130 Ga0307416_100067184 3300032002 Bacteria 2955
131 Ga0307416_100143207 3300032002 Bacteria 2177
132 Ga0307411_10020104 3300032005 Unclassified 3874
133 Ga0436364_1039299 3300037853 Bacteria 1009
134 Ga0436362_0482265 3300039453 Bacteria 1320
135 Ga0451847_0198184 3300041503 Bacteria 1073
136 Ga0450908_000486 3300042184 Bacteria 7635
137 Ga0439464_0039770 3300042439 Bacteria 1338
138 Ga0466957_0374895 3300044842 Bacteria 969
139 Ga0495638_0011921 3300046460 Bacteria 5975
140 Ga0495607_0000143 3300046501 Bacteria 75018
141 Ga0495606_0236037 3300046507 Bacteria 1022
142 Ga0495658_0059821 3300046683 Unclassified 2183
143 Ga0495669_0167131 3300046684 Bacteria 1045
144 Ga0496126_0596932 3300048929 Bacteria 870
145 Ga0501034_0100847 3300049571 Bacteria 2881
146 Ga0501036_0082345 3300049572 Bacteria 2720
147 Ga0501038_0333881 3300049574 Bacteria 1183
148 Ga0501039_0125551 3300049575 Bacteria 2013
149 Ga0501040_0060033 3300049576 Bacteria 2613
150 Ga0501043_0163456 3300049579 Bacteria 1739
151 Ga0501043_0513627 3300049579 Bacteria 894
152 Ga0501046_0078432 3300049580 Bacteria 2555
153 Ga0501047_0251970 3300049581 Bacteria 1614
154 Ga0501071_0166597 3300049587 Bacteria 1649
155 Ga0501073_0209746 3300049589 Bacteria 1346
156 Ga0501075_0037556 3300049591 Bacteria 3619
157 Ga0501076_0129758 3300049592 Bacteria 2044
158 Ga0501035_0350967 3300049822 Bacteria 1234
159 nmdc:mga0k408_2652_c1 3300050493 Bacteria 9496
160 nmdc:mga0k408_29232_c1 3300050493 Bacteria 3136
161 nmdc:mga07m45_15690_c1 3300050496 Bacteria 4046
162 nmdc:mga05p37_106430_c2 3300050507 Bacteria 2523
163 nmdc:mga0qj67_512405_c1 3300050509 Unclassified 964
164 nmdc:mga06r32_228464_c1 3300050510 Bacteria 1849
165 nmdc:mga08y16_2136_c1 3300050511 Bacteria 20265
166 nmdc:mga08y16_3_c1 3300050511 Bacteria 936907
167 nmdc:mga0rr50_229173_c1 3300050513 Bacteria 1536
168 Ga0500627_0002667 3300053158 Bacteria 5344
169 Ga0500601_001862 3300053737 Bacteria 2262
170 Ga0501084_0232755 3300054114 Unclassified 1555
171 2513873521 2513237139 Bacteria 8737671
172 2550696464 2548876994 Bacteria 4904866
173 2728754997 2728368998 Bacteria 8720350
174 2805915605 2802429603 Bacteria 8777136
175 2824700178 2824696289 Bacteria 8335049
176 2847942162 2847939898 Bacteria 8606328
177 2849083042 2849076700 Bacteria 7039503
178 2904691185 2904690495 Bacteria 9412302
179 2908756581 2908756301 Bacteria 8864324
180 2935615718 2935608549 Bacteria 8203142
181 2935825484 2935819856 Bacteria 8261050
182 2935853273 2935847175 Bacteria 8228321
183 Ga0070675_100499602
184 JGI25153J46596_10003418
185 Ga0065712_10252321
186 Ga0065715_10015094
187 Ga0065715_10142183
188 Ga0065707_10004048
189 Ga0070676_10442818
190 Ga0070690_100006593
191 Ga0070670_100002953
192 Ga0070670_100014509
193 Ga0070670_100204904
194 Ga0070666_10106920
195 Ga0068868_100325094
196 Ga0068868_100375585
197 Ga0070689_100072582
198 Ga0070661_100246292
199 Ga0070669_100019748
200 Ga0070669_100421322
201 Ga0070675_100055801
202 Ga0070675_100123198
203 Ga0070671_100066437
204 Ga0070674_100049062
205 Ga0070673_100074021
206 Ga0070688_100021394
207 Ga0070659_100484355
208 Ga0070713_100006874
209 Ga0070701_10092890
210 Ga0070663_100007304
211 Ga0070663_100456286
212 Ga0070662_100078757
213 Ga0070685_10035157
214 Ga0070706_100227090
215 Ga0070707_100607496
216 Ga0070672_100034353
217 Ga0070672_100071621
218 Ga0070686_100047000
219 Ga0070686_100454671
220 Ga0070696_100108922
221 Ga0070665_100032443
222 Ga0070664_100252026
223 Ga0068859_100007843
224 Ga0068859_100784017
225 Ga0068864_100023105
226 Ga0068861_100161019
227 Ga0068858_100227166
228 Ga0068860_100447371
229 Ga0081539_10018290
230 Ga0070717_10000379
231 Ga0075368_10015953
232 Ga0075368_10023734
233 Ga0070716_100155943
234 Ga0070712_100108180
235 Ga0075370_10065786
236 Ga0075428_100000023
237 Ga0075431_100042643
238 Ga0075431_100175437
239 Ga0075433_10281567
240 Ga0097620_100007843
241 Ga0097620_100784010
242 Ga0075435_100270158
243 Ga0111539_10000001
244 Ga0111539_10001572
245 Ga0105245_10449481
246 Ga0105247_10029432
247 Ga0114129_10056288
248 Ga0105248_10111836
249 Ga0105248_10561789
250 Ga0105237_10400645
251 Ga0105238_10004289
252 Ga0105249_10178113
253 Ga0105249_10691952
254 Ga0157375_10552849
255 Ga0157375_10775519
256 Ga0163163_10118599
257 Ga0157377_10255402
258 Ga0207656_10026828
259 Ga0207682_10026334
260 Ga0207680_10316142
261 Ga0207643_10181765
262 Ga0207671_10018825
263 Ga0207693_10341249
264 Ga0207662_10129399
265 Ga0207646_10440862
266 Ga0207681_10093068
267 Ga0207681_10123980
268 Ga0207694_10015560
269 Ga0207650_10008893
270 Ga0207650_10301248
271 Ga0207700_10008018
272 Ga0207664_10044473
273 Ga0207644_10008056
274 Ga0207644_10334596
275 Ga0207706_10079746
276 Ga0207670_10071579
277 Ga0207691_10039289
278 Ga0207691_10086774
279 Ga0207691_10110238
280 Ga0207711_10274784
281 Ga0207689_10179061
282 Ga0207661_10359127
283 Ga0207679_10039421
284 Ga0207679_10179995
285 Ga0207651_10074255
286 Ga0207651_10114058
287 Ga0207651_10290769
288 Ga0207640_10454034
289 Ga0207658_10213240
290 Ga0207703_10098399
291 Ga0207678_10046626
292 Ga0207678_10269408
293 Ga0207708_10052020
294 Ga0207641_10434046
295 Ga0207676_10187391
296 Ga0207675_100123289
297 Ga0207683_10021050
298 Ga0207683_10177926
299 Ga0207428_10000002
300 Ga0268266_10063185
301 Ga0268266_10379324
302 Ga0268265_10164111
303 Ga0307408_100021666
304 Ga0307405_10008620
305 Ga0307413_10222760
306 Ga0307410_10026861
307 Ga0307410_10256000
308 Ga0307410_10467541
309 Ga0307407_10024521
310 Ga0307412_10001169
311 Ga0307409_100243403
312 Ga0307416_100067184
313 Ga0307416_100143207
314 Ga0307411_10020104
315 Ga0436364_1039299
316 Ga0436362_0482265
317 Ga0451847_0198184
318 Ga0450908_000486
319 Ga0439464_0039770
320 Ga0466957_0374895
321 Ga0495638_0011921
322 Ga0495607_0000143
323 Ga0495606_0236037
324 Ga0495658_0059821
325 Ga0495669_0167131
326 Ga0496126_0596932
327 Ga0501034_0100847
328 Ga0501036_0082345
329 Ga0501038_0333881
330 Ga0501039_0125551
331 Ga0501040_0060033
332 Ga0501043_0163456
333 Ga0501043_0513627
334 Ga0501046_0078432
335 Ga0501047_0251970
336 Ga0501071_0166597
337 Ga0501073_0209746
338 Ga0501075_0037556
339 Ga0501076_0129758
340 Ga0501035_0350967
341 nmdc:mga0k408_2652_c1
342 nmdc:mga0k408_29232_c1
343 nmdc:mga07m45_15690_c1
344 nmdc:mga05p37_106430_c2
345 nmdc:mga0qj67_512405_c1
346 nmdc:mga06r32_228464_c1
347 nmdc:mga08y16_2136_c1
348 nmdc:mga08y16_3_c1
349 nmdc:mga0rr50_229173_c1
350 Ga0500627_0002667
351 Ga0500601_001862
352 Ga0501084_0232755
353 2513873521
354 2550696464
355 2728754997
356 2805915605
357 2824700178
358 2847942162
359 2849083042
360 2904691185
361 2908756581
362 2935615718
363 2935825484
364 2935853273

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01557

FAA_hydrolase

Fumarylacetoacetate (FAA) hydrolase family

48

280

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5d2i-assembly2.cif.gz_B 4-oxalocrotonate decarboxylase from pseudomonas putida g7 - complexed with calcium and acetate 0.8965 1 261
5d2i-assembly2.cif.gz_B 4-oxalocrotonate decarboxylase from pseudomonas putida g7 - complexed with calcium and acetate 0.8867 1 261
5d2k-assembly2.cif.gz_B 4-oxalocrotonate decarboxylase from pseudomonas putida g7 - complexed with magnesium and 2-oxoadipate 0.8816 1 261
2eb6-assembly1.cif.gz_A crystal structure of hpcg complexed with mg ion 0.8788 1 261
2eb6-assembly1.cif.gz_D-2 crystal structure of hpcg complexed with mg ion 0.8788 1 261
ID Description Score Start End Superfamily
af_I6XHH5_1_260_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.8911 1 260 3.90.850.10
af_I6XHH5_1_260_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.8879 1 260 3.90.850.10
5d2kB00 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.8816 1 261 3.90.850.10
5d2kB00 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.8784 1 261 3.90.850.10
2wqtB00 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.856 1 260 3.90.850.10
ID Description Score Start End GO Terms
AF-A0A5C9CGW4-F1-model_v4 Putative hydratase 0.988 3 261 GO:0005737
GO:0008684
AF-A0A435SMT0-F1-model_v4 Hydratase 0.9819 1 159 GO:0005737
GO:0008684
AF-A0A383BNQ6-F1-model_v4 Hydratase 0.9786 3 178 GO:0005737
GO:0008684
AF-A0A2H1KGR7-F1-model_v4 2-keto-4-pentenoate hydratase 0.977 5 261 GO:0005737
GO:0008684
AF-A0A2E3KBT9-F1-model_v4 ABC transporter permease 0.9764 9 261 GO:0005737
GO:0008684

Map