F278255

General Info

Members Datasets Scaffolds Average Seq Length
181 117 362 611

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2837183177|2837186986
Length 706
Sequence LRGATPTPEEKEAVDALLGPPTTRWEDATLAGIPTIVPDADTAARDGHAGSGHGGNGHGGNGQGPADLRTSTAGQAARARRHLLLPALHAVNDAVGWVSEGALEYICGRLTVPPAEAYGVATFYALFSVTPRPPRIAHVCEDLACRAGGADDLIADLEEAYGPPGPPSDVRHGEAAASGADVDDGAPTDGVMWERSPCLGLCERAPAVWLQRAGEDDAVCAPADVETVARGLAGEDRPAPSVIASVPQVAVDGPPRPEVGLRFLARVGRVDPTDLDAYRAAGGYQALRTAVGLGPRGALREVKDSALAGRGGAAFPLGIKWEAVASAPEHPHYVVANADESEPGTFKDRVLMEEDPFAVVESMTLAGFVTGSELGYVYLRGEYPLAHARLEHAIEQARERGFLGRDVMGEGFAFDLEIRRGGAAYICGEETALLESIEGKRGEPRQKPPFPTQVGLFAKPTAINNIETLVAGLHVLTDGGPGYASIGTDQSTGTKLFCVSGSVRHPGLYEVTFGATVREVLDLAGGVPGERSLQAVLLGGAAGTFLRPDQLDTPLTFEGTKAIGQALGSGVVMAFDESVDLLGMLGRVAAFFRDESCGQCVPCRVGTVRQEESLARIADGADPAAELELLDDVAQVMADASICGLGHTAPSALRSALSQGLLPFASSGGGTSGGGTSDGGGASSGGGTSEGETSEGETSEGAGRGR

Samples

Sample ID Description Type Environment
1 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
2 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
3 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
4 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
11 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
19 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
21 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
24 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
25 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
26 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
27 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
28 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
39 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
40 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
41 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
42 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
43 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
44 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
45 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
46 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
47 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
48 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
49 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
50 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
51 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
52 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
53 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
54 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
55 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
56 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
57 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
58 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
59 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
60 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
61 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
62 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
63 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
64 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
65 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
66 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
67 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
68 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
69 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
70 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
71 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
72 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
73 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
74 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
88 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
89 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
90 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
91 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
92 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
93 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
94 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
95 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
96 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
97 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
98 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
99 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
100 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
101 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
108 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
109 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
110 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
111 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
112 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
113 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
114 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
115 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
116 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
117 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.03
Metatranscriptomes 0
Isolates 4.97

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.66
Rhizosphere 90.06
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070703_10000030 3300005406 Bacteria 70119
2 Ga0070714_100145823 3300005435 Bacteria 2129
3 Ga0070705_100026248 3300005440 Bacteria 3169
4 Ga0070694_100000018 3300005444 Bacteria 73566
5 Ga0070708_100001020 3300005445 Bacteria 21321
6 Ga0070708_100002684 3300005445 Bacteria 13791
7 Ga0070708_100045085 3300005445 Bacteria 3883
8 Ga0070681_10013168 3300005458 Bacteria 8217
9 Ga0070681_10031781 3300005458 Bacteria 5299
10 Ga0070706_100009874 3300005467 Bacteria 8868
11 Ga0070706_100024848 3300005467 Bacteria 5516
12 Ga0070707_100002137 3300005468 Bacteria 18926
13 Ga0070707_100019203 3300005468 Bacteria 6439
14 Ga0070698_100026801 3300005471 Bacteria 5995
15 Ga0070698_100035824 3300005471 Bacteria 5129
16 Ga0070698_100059356 3300005471 Bacteria 3863
17 Ga0070698_100131507 3300005471 Bacteria 2458
18 Ga0070697_100000032 3300005536 Bacteria 103343
19 Ga0070695_100013655 3300005545 Bacteria 4882
20 Ga0070704_100001538 3300005549 Bacteria 12453
21 Ga0068855_100009784 3300005563 Bacteria 11565
22 Ga0068852_100044640 3300005616 Bacteria 3766
23 Ga0068866_10006121 3300005718 Bacteria 5004
24 Ga0081455_10008629 3300005937 Bacteria 10567
25 Ga0075428_100000274 3300006844 Bacteria 51155
26 Ga0075433_10005495 3300006852 Bacteria 9953
27 Ga0114129_10003491 3300009147 Bacteria 22102
28 Ga0114129_10010811 3300009147 Bacteria 13003
29 Ga0114129_10281137 3300009147 Bacteria 2223
30 Ga0105243_10057256 3300009148 Bacteria 3103
31 Ga0105242_10003933 3300009176 Bacteria 11547
32 Ga0105249_10041817 3300009553 Bacteria 4167
33 Ga0157378_10014254 3300013297 Bacteria 6959
34 Ga0213873_10000197 3300021358 Bacteria 11008
35 Ga0213874_10000023 3300021377 Bacteria 20152
36 Ga0213876_10000425 3300021384 Bacteria 35100
37 Ga0213875_10026896 3300021388 Bacteria 2737
38 Ga0207653_10000010 3300025885 Bacteria 165368
39 Ga0207642_10003642 3300025899 Bacteria 4890
40 Ga0207684_10000160 3300025910 Bacteria 115343
41 Ga0207684_10034480 3300025910 Bacteria 4300
42 Ga0207707_10010128 3300025912 Bacteria 8181
43 Ga0207646_10006681 3300025922 Bacteria 11889
44 Ga0207646_10019220 3300025922 Bacteria 6353
45 Ga0207646_10037745 3300025922 Bacteria 4354
46 Ga0207686_10030981 3300025934 Bacteria 3172
47 Ga0207667_10002390 3300025949 Bacteria 23495
48 Ga0207712_10010041 3300025961 Bacteria 6001
49 Ga0207674_10080793 3300026116 Bacteria 3254
50 Ga0207698_10037351 3300026142 Bacteria 3576
51 Ga0207428_10006082 3300027907 Bacteria 11164
52 Ga0307518_10000457 3300031838 Bacteria 31226
53 Ga0373936_0007433 3300035113 Bacteria 4119
54 Ga0373936_0009823 3300035113 Bacteria 3610
55 Ga0373956_0021629 3300035119 Bacteria 2745
56 Ga0373946_0000721 3300035171 Bacteria 11218
57 Ga0373962_0013420 3300035242 Bacteria 2075
58 Ga0373935_0005674 3300035692 Bacteria 7364
59 Ga0373925_0000181 3300037068 Bacteria 69133
60 Ga0373925_0011609 3300037068 Bacteria 6372
61 Ga0436364_1398617 3300037853 Bacteria 4962
62 Ga0436365_1695035 3300039437 Bacteria 137591
63 Ga0436360_0407698 3300039438 Bacteria 2719
64 Ga0436363_0246724 3300039450 Bacteria 56776
65 Ga0436362_0203546 3300039453 Bacteria 36636
66 Ga0466957_0065630 3300044842 Bacteria 2236
67 Ga0466967_0019015 3300045976 Bacteria 5513
68 Ga0466967_0033919 3300045976 Bacteria 4326
69 Ga0495603_0002505 3300046455 Bacteria 10800
70 Ga0495629_0000007 3300046459 Bacteria 358693
71 Ga0495639_0000380 3300046475 Bacteria 21270
72 Ga0495664_0053328 3300046477 Bacteria 2404
73 Ga0495608_0012929 3300046511 Bacteria 5794
74 Ga0495618_0064357 3300046514 Bacteria 2330
75 Ga0495644_0022832 3300046523 Bacteria 2383
76 Ga0495666_0000003 3300046526 Bacteria 124168
77 Ga0495586_0000276 3300046535 Bacteria 32921
78 Ga0495622_0003861 3300046557 Bacteria 7002
79 Ga0495667_0024669 3300046559 Bacteria 4050
80 Ga0495635_0000269 3300046663 Bacteria 33374
81 Ga0495657_0021821 3300046675 Bacteria 4593
82 Ga0495613_0013246 3300046689 Bacteria 6129
83 Ga0495613_0078034 3300046689 Bacteria 2410
84 Ga0495674_0002323 3300047319 Bacteria 18677
85 Ga0495676_0004643 3300047321 Bacteria 12584
86 Ga0495680_0000746 3300047322 Bacteria 36420
87 Ga0495680_0056014 3300047322 Bacteria 3054
88 Ga0495680_0137765 3300047322 Bacteria 1788
89 Ga0495684_0047943 3300047471 Bacteria 3266
90 Ga0496105_0067774 3300048908 Bacteria 2947
91 Ga0496111_0022441 3300048914 Bacteria 4420
92 Ga0496115_0004040 3300048918 Bacteria 10590
93 Ga0501031_0002746 3300049568 Bacteria 11216
94 Ga0501031_0027043 3300049568 Bacteria 3739
95 Ga0501032_0026076 3300049569 Bacteria 4025
96 Ga0501033_0043680 3300049570 Bacteria 3337
97 Ga0501036_0002668 3300049572 Bacteria 14078
98 Ga0501036_0030179 3300049572 Bacteria 4581
99 Ga0501037_0031471 3300049573 Bacteria 3917
100 Ga0501038_0039362 3300049574 Bacteria 4135
101 Ga0501038_0044768 3300049574 Bacteria 3843
102 Ga0501039_0003009 3300049575 Bacteria 12598
103 Ga0501039_0016256 3300049575 Bacteria 5699
104 Ga0501039_0031806 3300049575 Bacteria 4068
105 Ga0501039_0033707 3300049575 Bacteria 3950
106 Ga0501040_0003829 3300049576 Bacteria 9764
107 Ga0501040_0006773 3300049576 Bacteria 7432
108 Ga0501040_0013449 3300049576 Bacteria 5379
109 Ga0501040_0054036 3300049576 Bacteria 2753
110 Ga0501040_0058409 3300049576 Bacteria 2649
111 Ga0501041_0009134 3300049577 Bacteria 5834
112 Ga0501041_0009318 3300049577 Bacteria 5782
113 Ga0501041_0017429 3300049577 Bacteria 4274
114 Ga0501041_0024442 3300049577 Bacteria 3626
115 Ga0501042_0001153 3300049578 Bacteria 15275
116 Ga0501042_0005359 3300049578 Bacteria 8250
117 Ga0501043_0007614 3300049579 Bacteria 8587
118 Ga0501046_0003143 3300049580 Bacteria 15251
119 Ga0501046_0060037 3300049580 Bacteria 2976
120 Ga0501048_0020884 3300049582 Bacteria 4796
121 Ga0501048_0066541 3300049582 Bacteria 2547
122 Ga0501068_0007309 3300049584 Bacteria 6118
123 Ga0501068_0017252 3300049584 Bacteria 4173
124 Ga0501069_0026926 3300049585 Bacteria 3149
125 Ga0501070_0010219 3300049586 Bacteria 7940
126 Ga0501071_0002421 3300049587 Bacteria 11310
127 Ga0501071_0013791 3300049587 Bacteria 5515
128 Ga0501071_0030437 3300049587 Bacteria 3818
129 Ga0501072_0002636 3300049588 Bacteria 13447
130 Ga0501072_0007859 3300049588 Bacteria 8103
131 Ga0501072_0014879 3300049588 Bacteria 5963
132 Ga0501073_0030934 3300049589 Bacteria 3821
133 Ga0501073_0043912 3300049589 Bacteria 3151
134 Ga0501074_0016063 3300049590 Bacteria 5441
135 Ga0501074_0020830 3300049590 Bacteria 4763
136 Ga0501074_0071234 3300049590 Bacteria 2499
137 Ga0501075_0001183 3300049591 Bacteria 16890
138 Ga0501075_0005793 3300049591 Bacteria 8453
139 Ga0501075_0016460 3300049591 Bacteria 5326
140 Ga0501075_0075192 3300049591 Bacteria 2554
141 Ga0501076_0009889 3300049592 Bacteria 7051
142 Ga0501076_0023645 3300049592 Bacteria 4739
143 Ga0501076_0046259 3300049592 Bacteria 3438
144 Ga0501077_0000700 3300049593 Bacteria 20271
145 Ga0501079_0007548 3300049741 Bacteria 8231
146 Ga0501080_0017256 3300049742 Bacteria 6671
147 Ga0501080_0089845 3300049742 Bacteria 2853
148 Ga0501081_0001436 3300049743 Bacteria 14567
149 Ga0501081_0008447 3300049743 Bacteria 6688
150 Ga0501081_0021988 3300049743 Bacteria 4263
151 Ga0501081_0023735 3300049743 Bacteria 4112
152 Ga0501083_0032104 3300049744 Bacteria 3602
153 Ga0501035_0028272 3300049822 Bacteria 5119
154 Ga0501035_0029869 3300049822 Bacteria 4971
155 Ga0501035_0059569 3300049822 Bacteria 3400
156 Ga0501044_0018806 3300049823 Bacteria 7400
157 Ga0501045_0003722 3300049824 Bacteria 10486
158 Ga0501045_0005149 3300049824 Bacteria 9049
159 Ga0501045_0047385 3300049824 Bacteria 3130
160 Ga0501045_0168921 3300049824 Bacteria 1629
161 nmdc:mga05p37_28019_c1 3300050507 Bacteria 6864
162 nmdc:mga05p37_5503_c1 3300050507 Bacteria 14875
163 nmdc:mga06r32_72172_c1 3300050510 Bacteria 3342
164 Ga0501084_0001332 3300054114 Bacteria 19482
165 Ga0501084_0043500 3300054114 Bacteria 3757
166 Ga0501082_0007212 3300060353 Bacteria 9583
167 Ga0501082_0024220 3300060353 Bacteria 5234
168 Ga0501082_0045200 3300060353 Bacteria 3798
169 Ga0530510_0008204 3300061734 Bacteria 7285
170 Ga0530510_0010132 3300061734 Bacteria 6605
171 Ga0530510_0045188 3300061734 Bacteria 3182
172 Ga0530510_0055389 3300061734 Bacteria 2864
173 2837186986 2837183177 Bacteria 4637169
174 2586060719 2585427649 Bacteria 9053857
175 2676491652 2675903060 Bacteria 10051191
176 2884696244 2884693830 Bacteria 11273186
177 2895428191 2895427314 Bacteria 13147766
178 2895449598 2895442618 Bacteria 11027144
179 8047719517 8047710418 Bacteria 11023148
180 8055068697 8055066027 Bacteria 9479577
181 8055177148 8055172936 Bacteria 9305943
182 Ga0070703_10000030
183 Ga0070714_100145823
184 Ga0070705_100026248
185 Ga0070694_100000018
186 Ga0070708_100001020
187 Ga0070708_100002684
188 Ga0070708_100045085
189 Ga0070681_10013168
190 Ga0070681_10031781
191 Ga0070706_100009874
192 Ga0070706_100024848
193 Ga0070707_100002137
194 Ga0070707_100019203
195 Ga0070698_100026801
196 Ga0070698_100035824
197 Ga0070698_100059356
198 Ga0070698_100131507
199 Ga0070697_100000032
200 Ga0070695_100013655
201 Ga0070704_100001538
202 Ga0068855_100009784
203 Ga0068852_100044640
204 Ga0068866_10006121
205 Ga0081455_10008629
206 Ga0075428_100000274
207 Ga0075433_10005495
208 Ga0114129_10003491
209 Ga0114129_10010811
210 Ga0114129_10281137
211 Ga0105243_10057256
212 Ga0105242_10003933
213 Ga0105249_10041817
214 Ga0157378_10014254
215 Ga0213873_10000197
216 Ga0213874_10000023
217 Ga0213876_10000425
218 Ga0213875_10026896
219 Ga0207653_10000010
220 Ga0207642_10003642
221 Ga0207684_10000160
222 Ga0207684_10034480
223 Ga0207707_10010128
224 Ga0207646_10006681
225 Ga0207646_10019220
226 Ga0207646_10037745
227 Ga0207686_10030981
228 Ga0207667_10002390
229 Ga0207712_10010041
230 Ga0207674_10080793
231 Ga0207698_10037351
232 Ga0207428_10006082
233 Ga0307518_10000457
234 Ga0373936_0007433
235 Ga0373936_0009823
236 Ga0373956_0021629
237 Ga0373946_0000721
238 Ga0373962_0013420
239 Ga0373935_0005674
240 Ga0373925_0000181
241 Ga0373925_0011609
242 Ga0436364_1398617
243 Ga0436365_1695035
244 Ga0436360_0407698
245 Ga0436363_0246724
246 Ga0436362_0203546
247 Ga0466957_0065630
248 Ga0466967_0019015
249 Ga0466967_0033919
250 Ga0495603_0002505
251 Ga0495629_0000007
252 Ga0495639_0000380
253 Ga0495664_0053328
254 Ga0495608_0012929
255 Ga0495618_0064357
256 Ga0495644_0022832
257 Ga0495666_0000003
258 Ga0495586_0000276
259 Ga0495622_0003861
260 Ga0495667_0024669
261 Ga0495635_0000269
262 Ga0495657_0021821
263 Ga0495613_0013246
264 Ga0495613_0078034
265 Ga0495674_0002323
266 Ga0495676_0004643
267 Ga0495680_0000746
268 Ga0495680_0056014
269 Ga0495680_0137765
270 Ga0495684_0047943
271 Ga0496105_0067774
272 Ga0496111_0022441
273 Ga0496115_0004040
274 Ga0501031_0002746
275 Ga0501031_0027043
276 Ga0501032_0026076
277 Ga0501033_0043680
278 Ga0501036_0002668
279 Ga0501036_0030179
280 Ga0501037_0031471
281 Ga0501038_0039362
282 Ga0501038_0044768
283 Ga0501039_0003009
284 Ga0501039_0016256
285 Ga0501039_0031806
286 Ga0501039_0033707
287 Ga0501040_0003829
288 Ga0501040_0006773
289 Ga0501040_0013449
290 Ga0501040_0054036
291 Ga0501040_0058409
292 Ga0501041_0009134
293 Ga0501041_0009318
294 Ga0501041_0017429
295 Ga0501041_0024442
296 Ga0501042_0001153
297 Ga0501042_0005359
298 Ga0501043_0007614
299 Ga0501046_0003143
300 Ga0501046_0060037
301 Ga0501048_0020884
302 Ga0501048_0066541
303 Ga0501068_0007309
304 Ga0501068_0017252
305 Ga0501069_0026926
306 Ga0501070_0010219
307 Ga0501071_0002421
308 Ga0501071_0013791
309 Ga0501071_0030437
310 Ga0501072_0002636
311 Ga0501072_0007859
312 Ga0501072_0014879
313 Ga0501073_0030934
314 Ga0501073_0043912
315 Ga0501074_0016063
316 Ga0501074_0020830
317 Ga0501074_0071234
318 Ga0501075_0001183
319 Ga0501075_0005793
320 Ga0501075_0016460
321 Ga0501075_0075192
322 Ga0501076_0009889
323 Ga0501076_0023645
324 Ga0501076_0046259
325 Ga0501077_0000700
326 Ga0501079_0007548
327 Ga0501080_0017256
328 Ga0501080_0089845
329 Ga0501081_0001436
330 Ga0501081_0008447
331 Ga0501081_0021988
332 Ga0501081_0023735
333 Ga0501083_0032104
334 Ga0501035_0028272
335 Ga0501035_0029869
336 Ga0501035_0059569
337 Ga0501044_0018806
338 Ga0501045_0003722
339 Ga0501045_0005149
340 Ga0501045_0047385
341 Ga0501045_0168921
342 nmdc:mga05p37_28019_c1
343 nmdc:mga05p37_5503_c1
344 nmdc:mga06r32_72172_c1
345 Ga0501084_0001332
346 Ga0501084_0043500
347 Ga0501082_0007212
348 Ga0501082_0024220
349 Ga0501082_0045200
350 Ga0530510_0008204
351 Ga0530510_0010132
352 Ga0530510_0045188
353 Ga0530510_0055389
354 2837186986
355 2586060719
356 2676491652
357 2884696244
358 2895428191
359 2895449598
360 8047719517
361 8055068697
362 8055177148

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01512

Complex1_51K

Respiratory-chain NADH dehydrogenase 51 Kd subunit

302

472

0.97

PF10589

NADH_4Fe-4S

NADH-ubiquinone oxidoreductase-F iron-sulfur binding region

583

659

0.96

PF22461

SLBB_2

SLBB domain

495

558

0.92

PF10531

SLBB

SLBB domain

496

541

0.89

PF01257

2Fe-2S_thioredx

Thioredoxin-like [2Fe-2S] ferredoxin

71

230

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
7t30-assembly1.cif.gz_G structure of electron bifurcating ni-fe hydrogenase complex hydabcsl in fmn/nad(h) bound state 0.9519 211 611
8bq6-assembly1.cif.gz_F cryo-em structure of the arabidopsis thaliana i+iii2 supercomplex (complete conformation 2 composition) 0.9479 212 611
8e9i-assembly1.cif.gz_F mycobacterial respiratory complex i, semi-inserted quinone 0.9466 210 614
7o71-assembly1.cif.gz_B cryo-em structure of a respiratory complex i 0.9465 212 611
6g2j-assembly1.cif.gz_F mouse mitochondrial complex i in the active state 0.9463 212 611
ID Description Score Start End Superfamily
af_O94500_78_261_3.40.50.11540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NADH-ubiquinone oxidoreductase 51kDa subunit 0.9474 257 433 3.40.50.11540
2fugA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NADH-ubiquinone oxidoreductase 51kDa subunit 0.9439 257 435 3.40.50.11540
2fugA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NADH-ubiquinone oxidoreductase 51kDa subunit 0.9389 257 435 3.40.50.11540
3iamB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;NADH-quinone oxidoreductase subunit E 0.9336 53 104 1.10.10.1590
3i9v201 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;NADH-quinone oxidoreductase subunit E 0.9316 54 104 1.10.10.1590
ID Description Score Start End GO Terms
AF-A0A536JFR4-F1-model_v4 NADH-quinone oxidoreductase subunit E 0.9717 216 616 GO:0008137
GO:0010181
GO:0046872
GO:0051539
AF-X0UD01-F1-model_v4 NADH-ubiquinone oxidoreductase 51kDa subunit FMN-binding domain-containing protein 0.9716 238 513 GO:0046872
GO:0051539
AF-E9PJL9-F1-model_v4 NADH:ubiquinone oxidoreductase core subunit V1 0.9711 276 367 GO:0008137
GO:0046872
GO:0051539
AF-X1RL39-F1-model_v4 NADH-ubiquinone oxidoreductase 51kDa subunit FMN-binding domain-containing protein 0.9707 245 340 GO:0046872
GO:0051539
AF-A0A7V7AB39-F1-model_v4 NADH-quinone oxidoreductase subunit F 0.9704 211 532 GO:0046872
GO:0051539

Map