F277665

General Info

Members Datasets Scaffolds Average Seq Length
181 130 362 837

Family's Representative Sequence

Representative Sequence 3300035086|Ga0373934_0002320|Ga0373934_0002320_1912_4557
Length 881
Sequence MALTGRLPPSDNLTSRLDIRMIRLAVGVALALVAQSRAGSQEYSSRTPSSGARRTVPPPTDSGAYAIRAETAPVIDGKDDDAIWRDAPPITAFQQWQPTEGKEPRFRTEAKVAYDAANLFVFVRAFDPHPDSIIKILERRDSYTPSDMIWLFIDSYHDRRTGFEFGVNAAGVKMDQAIYDDGNEDSAWDGVWDVATRIDSLGWTAEFRIPLSQLRYGRDKSHTFGFTIDRDIYRYNERLSWPLFRQSKTGFVSQFGSLAGLDDLEAPRRLEAMPYVVTKNAASIAQNRYTTRSEGTLGGDLKYRVASNLTVDATINPDFGQVEADPAVLNLSAYESFFDERRPFFVAGRGLFRFDVNCSQVNCSSEGLYYSRRIGRTPQLAGTYGDTVPLAPTTILGAAKLLGRFPSGLTFGVLDATTRRASSPGDTTYEPATNYTVARLKQDFRGGNSSIGGMVTAVNRSVDQWTSPFLSSSAYAAAMDLHHRLFSNRYEFTAAVDKSRVEGSQSDILALQTNAVHYYQRPDAGLPLDSNRTTLDGDAEEVHFGKVAGQNLMFETSYLRRSAGFEVNDLGYLRRADQLSFNNWVGFFDRKQRAFTNRIQWNNNWWQYWTTDGLPLEAAYNTNTHITLRNNMGVHFGGTAGQLGTTYDDRSARGGPAVRQDRYLAPWMFVNGDDKRSVVPYFNANWFVGSGGRSRSWNGGPEIDYKMLGRFSSAFSLNYARNVSDNQWYGNFADSVKVTHYAFAHLNQTTTSATVRLNYTFTPNVSLQAYTQPFISKGTYSDVRQLSATPRADAYDDRYAAYGDTSVTNHPGGFNFKEFQSNVVFRWEYRPGSTLFLVWNEGRQGSVPTQGTHDFTGDVRDLMRLHPANTFLVKLSYWLNR

Samples

Sample ID Description Type Environment
1 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
80 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
84 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
94 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
95 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
96 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
97 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
98 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
99 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
100 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
103 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
104 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
105 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
106 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
118 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
119 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
120 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
126 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
127 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
128 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
129 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
130 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.31
Rhizosphere 94.48
Stem 0
Stem Tuber 0
Unclassified 7.18

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373934_0002320 3300035086 Bacteria 7001
2 Ga0065715_10090167 3300005293 Bacteria 7523
3 Ga0070690_100015721 3300005330 Bacteria 4520
4 Ga0070680_100002326 3300005336 Bacteria 14028
5 Ga0070680_100009667 3300005336 Bacteria 7419
6 Ga0070680_100020909 3300005336 Bacteria 5196
7 Ga0070680_100028120 3300005336 Bacteria 4509
8 Ga0070687_100013229 3300005343 Bacteria 3670
9 Ga0070673_100014160 3300005364 Bacteria 5544
10 Ga0070703_10001175 3300005406 Bacteria 8056
11 Ga0070703_10006328 3300005406 Bacteria 3317
12 Ga0070714_100019019 3300005435 Bacteria 5589
13 Ga0070714_100027893 3300005435 Bacteria 4679
14 Ga0070714_100042992 3300005435 Bacteria 3819
15 Ga0070701_10005924 3300005438 Bacteria 5104
16 Ga0070694_100000790 3300005444 Bacteria 17709
17 Ga0070694_100001698 3300005444 Bacteria 12963
18 Ga0070708_100000076 3300005445 Bacteria 63230
19 Ga0070708_100013501 3300005445 Bacteria 6691
20 Ga0070708_100041024 3300005445 Bacteria 4056
21 Ga0070662_100000751 3300005457 Bacteria 19888
22 Ga0070681_10000989 3300005458 Bacteria 24048
23 Ga0070681_10055476 3300005458 Unclassified 3945
24 Ga0068867_100012158 3300005459 Bacteria 6081
25 Ga0068867_100036882 3300005459 Unclassified 3552
26 Ga0070706_100005424 3300005467 Bacteria 12149
27 Ga0070707_100008227 3300005468 Bacteria 9676
28 Ga0070698_100000087 3300005471 Bacteria 72711
29 Ga0070698_100003388 3300005471 Bacteria 17531
30 Ga0070699_100015630 3300005518 Bacteria 6521
31 Ga0070699_100034318 3300005518 Bacteria 4385
32 Ga0070699_100043173 3300005518 Bacteria 3903
33 Ga0070679_100000568 3300005530 Bacteria 31287
34 Ga0070679_100002165 3300005530 Bacteria 17716
35 Ga0070679_100016102 3300005530 Bacteria 7203
36 Ga0070679_100069807 3300005530 Bacteria 3505
37 Ga0070697_100009493 3300005536 Bacteria 7604
38 Ga0070697_100035943 3300005536 Bacteria 3999
39 Ga0070697_100036826 3300005536 Bacteria 3952
40 Ga0068853_100065749 3300005539 Unclassified 3147
41 Ga0070695_100005921 3300005545 Bacteria 7217
42 Ga0070695_100014713 3300005545 Bacteria 4719
43 Ga0070696_100004131 3300005546 Bacteria 9680
44 Ga0070693_100000821 3300005547 Bacteria 13799
45 Ga0070704_100017599 3300005549 Bacteria 4549
46 Ga0068855_100011613 3300005563 Bacteria 10642
47 Ga0068855_100056684 3300005563 Bacteria 4596
48 Ga0070664_100002335 3300005564 Bacteria 15241
49 Ga0070664_100014647 3300005564 Bacteria 6401
50 Ga0070664_100029185 3300005564 Bacteria 4598
51 Ga0070664_100045462 3300005564 Unclassified 3708
52 Ga0068854_100018038 3300005578 Bacteria 4731
53 Ga0068852_100008095 3300005616 Bacteria 7714
54 Ga0068864_100044704 3300005618 Bacteria 3798
55 Ga0068864_100046723 3300005618 Bacteria 3716
56 Ga0068866_10000027 3300005718 Bacteria 59348
57 Ga0068861_100005841 3300005719 Bacteria 8359
58 Ga0070716_100002076 3300006173 Bacteria 9182
59 Ga0075431_100009588 3300006847 Bacteria 9722
60 Ga0068865_100007348 3300006881 Bacteria 6774
61 Ga0075436_100008838 3300006914 Bacteria 6888
62 Ga0075436_100014611 3300006914 Bacteria 5381
63 Ga0075435_100020516 3300007076 Bacteria 5065
64 Ga0075435_100046590 3300007076 Bacteria 3478
65 Ga0099794_10000115 3300007265 Bacteria 29217
66 Ga0105240_10018756 3300009093 Bacteria 9268
67 Ga0114129_10033050 3300009147 Bacteria 7310
68 Ga0105243_10002222 3300009148 Bacteria 16355
69 Ga0105242_10000188 3300009176 Bacteria 47561
70 Ga0105242_10002582 3300009176 Bacteria 14186
71 Ga0105248_10001416 3300009177 Bacteria 26806
72 Ga0105237_10007388 3300009545 Bacteria 12032
73 Ga0105238_10019706 3300009551 Bacteria 6870
74 Ga0105238_10055609 3300009551 Bacteria 3972
75 Ga0157369_10071489 3300013105 Bacteria 3724
76 Ga0157378_10000966 3300013297 Bacteria 26354
77 Ga0157378_10025781 3300013297 Bacteria 5179
78 Ga0157372_10031434 3300013307 Bacteria 5813
79 Ga0157375_10047716 3300013308 Bacteria 4184
80 Ga0157375_10108874 3300013308 Unclassified 2866
81 Ga0163161_10031645 3300017792 Bacteria 3771
82 Ga0213876_10016102 3300021384 Bacteria 3954
83 Ga0207653_10000299 3300025885 Bacteria 28503
84 Ga0207645_10001998 3300025907 Bacteria 16384
85 Ga0207645_10023644 3300025907 Bacteria 3990
86 Ga0207684_10004089 3300025910 Bacteria 13899
87 Ga0207684_10023639 3300025910 Bacteria 5246
88 Ga0207707_10067890 3300025912 Bacteria 3106
89 Ga0207693_10023331 3300025915 Bacteria 4912
90 Ga0207660_10005151 3300025917 Bacteria 8498
91 Ga0207662_10026980 3300025918 Bacteria 3316
92 Ga0207652_10037121 3300025921 Bacteria 4124
93 Ga0207646_10001423 3300025922 Bacteria 29699
94 Ga0207646_10003979 3300025922 Bacteria 16380
95 Ga0207694_10034479 3300025924 Bacteria 3881
96 Ga0207706_10000051 3300025933 Bacteria 115572
97 Ga0207686_10000290 3300025934 Bacteria 37163
98 Ga0207709_10005251 3300025935 Bacteria 7368
99 Ga0207704_10000195 3300025938 Bacteria 31376
100 Ga0207665_10001464 3300025939 Bacteria 15894
101 Ga0207691_10029498 3300025940 Bacteria 5131
102 Ga0207691_10049819 3300025940 Bacteria 3837
103 Ga0207711_10023886 3300025941 Bacteria 5117
104 Ga0207667_10012767 3300025949 Bacteria 9647
105 Ga0207667_10046461 3300025949 Bacteria 4598
106 Ga0207667_10057540 3300025949 Bacteria 4081
107 Ga0207668_10021899 3300025972 Bacteria 4082
108 Ga0207640_10002286 3300025981 Bacteria 10299
109 Ga0207708_10005889 3300026075 Bacteria 9067
110 Ga0207702_10002434 3300026078 Bacteria 17656
111 Ga0207648_10000046 3300026089 Bacteria 111511
112 Ga0207648_10031954 3300026089 Bacteria 4651
113 Ga0207648_10053048 3300026089 Unclassified 3545
114 Ga0207676_10014037 3300026095 Bacteria 5753
115 Ga0207675_100011063 3300026118 Bacteria 8452
116 Ga0207675_100066655 3300026118 Bacteria 3365
117 Ga0207683_10022394 3300026121 Bacteria 5423
118 Ga0209588_1000159 3300027671 Bacteria 19396
119 Ga0265332_10005225 3300031238 Bacteria 6007
120 Ga0265327_10005013 3300031251 Bacteria 11351
121 Ga0307408_100012813 3300031548 Bacteria 5561
122 Ga0307408_100043210 3300031548 Unclassified 3206
123 Ga0265314_10012228 3300031711 Bacteria 7024
124 Ga0307410_10000059 3300031852 Bacteria 39156
125 Ga0307410_10018937 3300031852 Unclassified 4175
126 Ga0307409_100000441 3300031995 Bacteria 17591
127 Ga0307416_100000784 3300032002 Bacteria 16708
128 Ga0373945_0006339 3300035116 Bacteria 3813
129 Ga0373937_0007965 3300036401 Bacteria 9184
130 Ga0395898_0030979 3300037466 Bacteria 5349
131 Ga0395905_0004103 3300037471 Bacteria 15259
132 Ga0395901_0002232 3300038443 Bacteria 19774
133 Ga0436365_0087330 3300039437 Bacteria 5243
134 Ga0436365_1891712 3300039437 Bacteria 24356
135 Ga0436365_1897280 3300039437 Bacteria 4405
136 Ga0451576_0011242 3300045051 Bacteria 10193
137 Ga0451576_0016320 3300045051 Bacteria 8201
138 Ga0451576_0017999 3300045051 Bacteria 7752
139 Ga0495580_0023997 3300046472 Bacteria 4470
140 Ga0495608_0020643 3300046511 Bacteria 4526
141 Ga0495666_0013055 3300046526 Bacteria 4139
142 Ga0495652_0065080 3300046529 Bacteria 3064
143 Ga0495665_0000680 3300046531 Bacteria 17434
144 Ga0495667_0000621 3300046559 Bacteria 22620
145 Ga0495634_0045887 3300046642 Bacteria 2951
146 Ga0495588_0001127 3300046674 Bacteria 11520
147 Ga0495658_0002165 3300046683 Bacteria 9942
148 Ga0495658_0009203 3300046683 Bacteria 4912
149 Ga0495613_0028386 3300046689 Bacteria 4161
150 Ga0495680_0040054 3300047322 Bacteria 3734
151 Ga0495684_0004529 3300047471 Bacteria 10856
152 Ga0495684_0009200 3300047471 Bacteria 7625
153 Ga0495593_0020476 3300047673 Bacteria 3704
154 Ga0495614_0000074 3300048089 Bacteria 32758
155 Ga0496104_0007809 3300048907 Bacteria 9482
156 Ga0496109_0001102 3300048912 Bacteria 22388
157 Ga0496110_0086708 3300048913 Unclassified 2795
158 Ga0496111_0016002 3300048914 Bacteria 5162
159 Ga0496112_0000255 3300048915 Bacteria 34059
160 Ga0496114_0071517 3300048917 Bacteria 2916
161 Ga0501041_0013415 3300049577 Bacteria 4857
162 Ga0501042_0008322 3300049578 Bacteria 6839
163 Ga0501047_0000567 3300049581 Bacteria 39527
164 Ga0501048_0018194 3300049582 Bacteria 5170
165 Ga0501075_0024617 3300049591 Unclassified 4418
166 Ga0501075_0047568 3300049591 Bacteria 3223
167 Ga0501076_0058700 3300049592 Unclassified 3059
168 Ga0501202_000597 3300049652 Bacteria 5285
169 Ga0501235_000358 3300049669 Bacteria 8723
170 Ga0501079_0019022 3300049741 Bacteria 5246
171 Ga0501079_0019656 3300049741 Bacteria 5158
172 Ga0501035_0001661 3300049822 Bacteria 22487
173 Ga0501045_0011189 3300049824 Bacteria 6292
174 nmdc:mga0n895_44466_c1 3300050512 Bacteria 4331
175 nmdc:mga0n895_47119_c1 3300050512 Bacteria 4214
176 nmdc:mga0rr50_32079_c1 3300050513 Bacteria 3739
177 nmdc:mga08x19_5590_c1 3300050514 Bacteria 7428
178 Ga0501084_0028233 3300054114 Unclassified 4689
179 Ga0590071_004412 3300059421 Bacteria 3417
180 Ga0501082_0085845 3300060353 Unclassified 2714
181 Ga0530510_0015140 3300061734 Bacteria 5448
182 Ga0373934_0002320
183 Ga0065715_10090167
184 Ga0070690_100015721
185 Ga0070680_100002326
186 Ga0070680_100009667
187 Ga0070680_100020909
188 Ga0070680_100028120
189 Ga0070687_100013229
190 Ga0070673_100014160
191 Ga0070703_10001175
192 Ga0070703_10006328
193 Ga0070714_100019019
194 Ga0070714_100027893
195 Ga0070714_100042992
196 Ga0070701_10005924
197 Ga0070694_100000790
198 Ga0070694_100001698
199 Ga0070708_100000076
200 Ga0070708_100013501
201 Ga0070708_100041024
202 Ga0070662_100000751
203 Ga0070681_10000989
204 Ga0070681_10055476
205 Ga0068867_100012158
206 Ga0068867_100036882
207 Ga0070706_100005424
208 Ga0070707_100008227
209 Ga0070698_100000087
210 Ga0070698_100003388
211 Ga0070699_100015630
212 Ga0070699_100034318
213 Ga0070699_100043173
214 Ga0070679_100000568
215 Ga0070679_100002165
216 Ga0070679_100016102
217 Ga0070679_100069807
218 Ga0070697_100009493
219 Ga0070697_100035943
220 Ga0070697_100036826
221 Ga0068853_100065749
222 Ga0070695_100005921
223 Ga0070695_100014713
224 Ga0070696_100004131
225 Ga0070693_100000821
226 Ga0070704_100017599
227 Ga0068855_100011613
228 Ga0068855_100056684
229 Ga0070664_100002335
230 Ga0070664_100014647
231 Ga0070664_100029185
232 Ga0070664_100045462
233 Ga0068854_100018038
234 Ga0068852_100008095
235 Ga0068864_100044704
236 Ga0068864_100046723
237 Ga0068866_10000027
238 Ga0068861_100005841
239 Ga0070716_100002076
240 Ga0075431_100009588
241 Ga0068865_100007348
242 Ga0075436_100008838
243 Ga0075436_100014611
244 Ga0075435_100020516
245 Ga0075435_100046590
246 Ga0099794_10000115
247 Ga0105240_10018756
248 Ga0114129_10033050
249 Ga0105243_10002222
250 Ga0105242_10000188
251 Ga0105242_10002582
252 Ga0105248_10001416
253 Ga0105237_10007388
254 Ga0105238_10019706
255 Ga0105238_10055609
256 Ga0157369_10071489
257 Ga0157378_10000966
258 Ga0157378_10025781
259 Ga0157372_10031434
260 Ga0157375_10047716
261 Ga0157375_10108874
262 Ga0163161_10031645
263 Ga0213876_10016102
264 Ga0207653_10000299
265 Ga0207645_10001998
266 Ga0207645_10023644
267 Ga0207684_10004089
268 Ga0207684_10023639
269 Ga0207707_10067890
270 Ga0207693_10023331
271 Ga0207660_10005151
272 Ga0207662_10026980
273 Ga0207652_10037121
274 Ga0207646_10001423
275 Ga0207646_10003979
276 Ga0207694_10034479
277 Ga0207706_10000051
278 Ga0207686_10000290
279 Ga0207709_10005251
280 Ga0207704_10000195
281 Ga0207665_10001464
282 Ga0207691_10029498
283 Ga0207691_10049819
284 Ga0207711_10023886
285 Ga0207667_10012767
286 Ga0207667_10046461
287 Ga0207667_10057540
288 Ga0207668_10021899
289 Ga0207640_10002286
290 Ga0207708_10005889
291 Ga0207702_10002434
292 Ga0207648_10000046
293 Ga0207648_10031954
294 Ga0207648_10053048
295 Ga0207676_10014037
296 Ga0207675_100011063
297 Ga0207675_100066655
298 Ga0207683_10022394
299 Ga0209588_1000159
300 Ga0265332_10005225
301 Ga0265327_10005013
302 Ga0307408_100012813
303 Ga0307408_100043210
304 Ga0265314_10012228
305 Ga0307410_10000059
306 Ga0307410_10018937
307 Ga0307409_100000441
308 Ga0307416_100000784
309 Ga0373945_0006339
310 Ga0373937_0007965
311 Ga0395898_0030979
312 Ga0395905_0004103
313 Ga0395901_0002232
314 Ga0436365_0087330
315 Ga0436365_1891712
316 Ga0436365_1897280
317 Ga0451576_0011242
318 Ga0451576_0016320
319 Ga0451576_0017999
320 Ga0495580_0023997
321 Ga0495608_0020643
322 Ga0495666_0013055
323 Ga0495652_0065080
324 Ga0495665_0000680
325 Ga0495667_0000621
326 Ga0495634_0045887
327 Ga0495588_0001127
328 Ga0495658_0002165
329 Ga0495658_0009203
330 Ga0495613_0028386
331 Ga0495680_0040054
332 Ga0495684_0004529
333 Ga0495684_0009200
334 Ga0495593_0020476
335 Ga0495614_0000074
336 Ga0496104_0007809
337 Ga0496109_0001102
338 Ga0496110_0086708
339 Ga0496111_0016002
340 Ga0496112_0000255
341 Ga0496114_0071517
342 Ga0501041_0013415
343 Ga0501042_0008322
344 Ga0501047_0000567
345 Ga0501048_0018194
346 Ga0501075_0024617
347 Ga0501075_0047568
348 Ga0501076_0058700
349 Ga0501202_000597
350 Ga0501235_000358
351 Ga0501079_0019022
352 Ga0501079_0019656
353 Ga0501035_0001661
354 Ga0501045_0011189
355 nmdc:mga0n895_44466_c1
356 nmdc:mga0n895_47119_c1
357 nmdc:mga0rr50_32079_c1
358 nmdc:mga08x19_5590_c1
359 Ga0501084_0028233
360 Ga0590071_004412
361 Ga0501082_0085845
362 Ga0530510_0015140

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06452

CBM9_1

Carbohydrate family 9 binding domain-like

75

239

0.86

PF19313

DUF5916

Domain of unknown function (DUF5916)

266

880

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jpq-assembly2.cif.gz_B crystal structure of a putative carbohydrate-binding protein (bacuni_03838) from bacteroides uniformis atcc 8492 at 2.70 a resolution 0.7277 19 211
2pod-assembly1.cif.gz_B crystal structure of a member of enolase superfamily from burkholderia pseudomallei k96243 0.6761 104 139
7nwo-assembly1.cif.gz_AAA a carbohydrate binding module family 9 (cbm9) from caldicellulosiruptor kristjanssonii in complex with glucose 0.6652 20 217
7nwq-assembly1.cif.gz_AAA a carbohydrate binding module family 9 (cbm9) from caldicellulosiruptor kristjanssonii in complex with cellotriose 0.664 19 215
7nwo-assembly1.cif.gz_AAA a carbohydrate binding module family 9 (cbm9) from caldicellulosiruptor kristjanssonii in complex with glucose 0.6526 20 217
ID Description Score Start End Superfamily
af_P70190_111_255_3.90.1150.210 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;F-actin capping protein, beta subunit 0.7683 646 731 3.90.1150.210
4jpqB00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.7111 19 211 2.60.40.1190
1i8aA00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.6815 20 211 2.60.40.1190
1i8aA00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.6655 20 211 2.60.40.1190
af_Q54EU8_18_231_2.60.40.1190 Mainly Beta;Sandwich;Immunoglobulin-like; 0.6526 9 210 2.60.40.1190
ID Description Score Start End GO Terms
AF-A0A6H9L3L9-F1-model_v4 Uncharacterized protein 0.9093 13 830 GO:0004553
GO:0016052
GO:0030246
AF-A0A2T4WSB3-F1-model_v4 Protein with DOMON-like ligand-binding domain protein 0.9044 425 831
AF-A0A1W9SKK8-F1-model_v4 DUF5916 domain-containing protein 0.8974 385 831
AF-A0A6H9L3L9-F1-model_v4 Uncharacterized protein 0.8934 13 830 GO:0004553
GO:0016052
GO:0030246
AF-A0A2J6I1L0-F1-model_v4 Uncharacterized protein 0.8888 2 830 GO:0004553
GO:0016052
GO:0030246

Map