F277657

General Info

Members Datasets Scaffolds Average Seq Length
181 113 362 498

Family's Representative Sequence

Representative Sequence 3300032126|Ga0307415_100010481|Ga0307415_1000104814
Length 558
Sequence VPTTRPARFAEVGPLHEGGHGEAPGSLDNSSTSAASRSRVGPKGLGPLRRSAVDGTFAPVLLRTVLALAAGVSLALAFEPVAAAYVVPFSVAGFVLATRGLRATRAWLPGLAFGVGFYFVHIWWMRAVGTDAWMALASVEAVFYGLLGSVTAALGRRPLWPLWVTAAWVAMEVVRSSWPFSGMPWGRLAFATVDTPVAPALAYVGSVGVSFLLALLGCLLAALVPARGRRAAAAALLGVAAVTVAPALAPYSPSPDAHVTVAAVQGDVPGNGDNILLDFRQVTRNHVDATVDLARDAAAGRVPAPDFVIWPENSTAVDPFADAETGAGIEEASKALGVPLLVGAIVDAGPRNVLNQGIVWDPATGAGDRYTKWHPVPYGEYIPFRRFFSGNFGRLALIPRDMLSGTRTEPLTIAGVRVGDAICFDVAYDDGLYAQVGKGAQMLAVQTSNATFIHTSQIDQQFAISRLRAIETGRYVVVAATNGVSGIIAPDGTVLDRAGTRTRDVLVERIGLDGAITPAVRLGAWIGRLCAAAVVLGMLLELLAYRRFRQPDRVKAAA

Samples

Sample ID Description Type Environment
1 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
19 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
23 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
24 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
29 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
30 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
42 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
45 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
46 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
47 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
48 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
49 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
50 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
51 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
54 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
55 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
56 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
57 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
58 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
59 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
60 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
61 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
62 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
63 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
64 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
65 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
66 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
81 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
82 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
83 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
84 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
85 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
86 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
87 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
88 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
89 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
90 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
91 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
92 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
93 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
94 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
95 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
98 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
99 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
100 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
101 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
102 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
103 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
104 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
105 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
106 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
107 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
110 2643221615 Nocardioides sp. Root224 Isolate Unclassified
111 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
112 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
113 2857481737 Nocardioides sp. R-74106 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.24
Metatranscriptomes 0
Isolates 2.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.89
Nodule 0
Rhizoplane 11.6
Rhizosphere 66.3
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307415_100010481 3300032126 Bacteria 5252
2 JGI24737J22298_10023592 3300001990 Bacteria 1951
3 Ga0070683_100012360 3300005329 Bacteria 7416
4 Ga0070689_100140928 3300005340 Bacteria 1939
5 Ga0070667_100078275 3300005367 Bacteria 2824
6 Ga0070714_100006464 3300005435 Bacteria 9054
7 Ga0070681_10225629 3300005458 Bacteria 1788
8 Ga0070698_100002455 3300005471 Bacteria 20452
9 Ga0070679_100146038 3300005530 Bacteria 2343
10 Ga0070684_100004679 3300005535 Bacteria 10449
11 Ga0070665_100004296 3300005548 Bacteria 14978
12 Ga0068856_100030983 3300005614 Bacteria 5232
13 Ga0068860_100000882 3300005843 Bacteria 33314
14 Ga0075365_10004807 3300006038 Bacteria 7205
15 Ga0075365_10005082 3300006038 Bacteria 7063
16 Ga0075365_10013038 3300006038 Bacteria 4958
17 Ga0075365_10017776 3300006038 Bacteria 4359
18 Ga0075365_10017874 3300006038 Bacteria 4350
19 Ga0075365_10026879 3300006038 Bacteria 3657
20 Ga0075365_10028553 3300006038 Bacteria 3559
21 Ga0075365_10036698 3300006038 Bacteria 3177
22 Ga0075368_10001528 3300006042 Bacteria 7407
23 Ga0075368_10007644 3300006042 Bacteria 3820
24 Ga0075363_100003533 3300006048 Bacteria 6672
25 Ga0075363_100004855 3300006048 Bacteria 5939
26 Ga0075363_100005297 3300006048 Bacteria 5725
27 Ga0075364_10004142 3300006051 Bacteria 8309
28 Ga0075364_10019983 3300006051 Bacteria 4210
29 Ga0075364_10051221 3300006051 Bacteria 2696
30 Ga0075367_10004312 3300006178 Bacteria 6918
31 Ga0075370_10018020 3300006353 Bacteria 3825
32 Ga0105245_10033266 3300009098 Bacteria 4568
33 Ga0105243_10153876 3300009148 Bacteria 1976
34 Ga0105238_10119237 3300009551 Bacteria 2619
35 Ga0105239_10003866 3300010375 Bacteria 18175
36 Ga0105246_10039592 3300011119 Bacteria 3176
37 Ga0157372_10003827 3300013307 Bacteria 16176
38 Ga0157375_10006629 3300013308 Bacteria 10075
39 Ga0163163_10026709 3300014325 Bacteria 5522
40 Ga0157377_10079273 3300014745 Bacteria 1916
41 Ga0157379_10038769 3300014968 Bacteria 4250
42 Ga0207652_10097385 3300025921 Bacteria 2593
43 Ga0207687_10012913 3300025927 Bacteria 5457
44 Ga0207690_10115174 3300025932 Bacteria 1942
45 Ga0207661_10008501 3300025944 Bacteria 7337
46 Ga0207661_10051113 3300025944 Bacteria 3297
47 Ga0207658_10068433 3300025986 Bacteria 2679
48 Ga0207703_10040174 3300026035 Bacteria 3743
49 Ga0207708_10032894 3300026075 Bacteria 3937
50 Ga0207702_10012578 3300026078 Bacteria 7041
51 Ga0207648_10038123 3300026089 Bacteria 4230
52 Ga0207674_10063146 3300026116 Bacteria 3739
53 Ga0207675_100057330 3300026118 Bacteria 3634
54 Ga0207675_100060458 3300026118 Bacteria 3537
55 Ga0209813_10003830 3300027866 Bacteria 3556
56 Ga0209813_10007337 3300027866 Bacteria 2746
57 Ga0268266_10002654 3300028379 Bacteria 18847
58 Ga0268264_10001649 3300028381 Bacteria 20616
59 Ga0307409_100031787 3300031995 Bacteria 3816
60 Ga0307409_100052238 3300031995 Bacteria 3132
61 Ga0395905_0031579 3300037471 Bacteria 4986
62 Ga0439434_0001381 3300042435 Bacteria 7005
63 Ga0466965_0013089 3300044683 Bacteria 3910
64 Ga0466961_0044886 3300044693 Bacteria 2828
65 Ga0466964_0009768 3300044706 Bacteria 3615
66 Ga0466970_0002953 3300044765 Bacteria 8243
67 Ga0466957_0011441 3300044842 Bacteria 5122
68 Ga0466960_0003052 3300044901 Bacteria 6402
69 Ga0466960_0022856 3300044901 Bacteria 2800
70 Ga0466967_0017705 3300045976 Bacteria 5668
71 Ga0466967_0032548 3300045976 Bacteria 4403
72 Ga0466967_0084884 3300045976 Bacteria 2865
73 Ga0496100_0018585 3300048903 Bacteria 4126
74 Ga0496100_0037403 3300048903 Bacteria 3068
75 Ga0496102_0088068 3300048905 Bacteria 2869
76 Ga0496104_0049400 3300048907 Bacteria 3967
77 Ga0496106_0083410 3300048909 Bacteria 2458
78 Ga0496107_0035008 3300048910 Bacteria 3599
79 Ga0496108_0010560 3300048911 Bacteria 7497
80 Ga0496108_0038212 3300048911 Bacteria 4000
81 Ga0496109_0005951 3300048912 Bacteria 10237
82 Ga0496109_0074382 3300048912 Bacteria 3123
83 Ga0496109_0099577 3300048912 Bacteria 2696
84 Ga0496109_0189786 3300048912 Bacteria 1931
85 Ga0496110_0003268 3300048913 Bacteria 12360
86 Ga0496110_0127894 3300048913 Bacteria 2293
87 Ga0496110_0219285 3300048913 Bacteria 1730
88 Ga0496111_0148287 3300048914 Bacteria 1740
89 Ga0496112_0226238 3300048915 Bacteria 1826
90 Ga0496114_0003343 3300048917 Bacteria 12327
91 Ga0496114_0068172 3300048917 Bacteria 2986
92 Ga0496114_0180401 3300048917 Bacteria 1844
93 Ga0496115_0010588 3300048918 Bacteria 6897
94 Ga0501031_0003288 3300049568 Bacteria 10375
95 Ga0501032_0037036 3300049569 Bacteria 3328
96 Ga0501033_0001321 3300049570 Bacteria 22055
97 Ga0501033_0038425 3300049570 Bacteria 3578
98 Ga0501034_0006096 3300049571 Bacteria 13014
99 Ga0501034_0028742 3300049571 Bacteria 5657
100 Ga0501034_0127632 3300049571 Bacteria 2528
101 Ga0501036_0003085 3300049572 Bacteria 13292
102 Ga0501036_0041882 3300049572 Bacteria 3875
103 Ga0501036_0080820 3300049572 Bacteria 2747
104 Ga0501036_0142580 3300049572 Bacteria 2021
105 Ga0501037_0008083 3300049573 Bacteria 7707
106 Ga0501037_0008117 3300049573 Bacteria 7694
107 Ga0501037_0023795 3300049573 Bacteria 4529
108 Ga0501038_0002800 3300049574 Bacteria 16233
109 Ga0501038_0013190 3300049574 Bacteria 7539
110 Ga0501038_0093610 3300049574 Bacteria 2513
111 Ga0501038_0115138 3300049574 Bacteria 2223
112 Ga0501039_0004558 3300049575 Bacteria 10467
113 Ga0501039_0022291 3300049575 Bacteria 4862
114 Ga0501039_0027492 3300049575 Bacteria 4374
115 Ga0501040_0002442 3300049576 Bacteria 11969
116 Ga0501041_0005387 3300049577 Bacteria 7495
117 Ga0501041_0043426 3300049577 Bacteria 2733
118 Ga0501042_0004218 3300049578 Bacteria 9152
119 Ga0501042_0008085 3300049578 Bacteria 6923
120 Ga0501043_0012603 3300049579 Bacteria 6613
121 Ga0501046_0004537 3300049580 Bacteria 12580
122 Ga0501046_0009611 3300049580 Bacteria 8342
123 Ga0501046_0094306 3300049580 Bacteria 2300
124 Ga0501047_0022006 3300049581 Bacteria 6123
125 Ga0501048_0011248 3300049582 Bacteria 6673
126 Ga0501048_0013087 3300049582 Bacteria 6159
127 Ga0501067_0000382 3300049583 Bacteria 24117
128 Ga0501068_0004453 3300049584 Bacteria 7623
129 Ga0501069_0005381 3300049585 Bacteria 6661
130 Ga0501070_0011760 3300049586 Bacteria 7393
131 Ga0501070_0050776 3300049586 Bacteria 3442
132 Ga0501071_0001717 3300049587 Bacteria 12856
133 Ga0501071_0032048 3300049587 Bacteria 3730
134 Ga0501072_0009579 3300049588 Bacteria 7367
135 Ga0501073_0043065 3300049589 Bacteria 3184
136 Ga0501074_0002178 3300049590 Bacteria 13583
137 Ga0501074_0060191 3300049590 Bacteria 2736
138 Ga0501074_0123276 3300049590 Bacteria 1853
139 Ga0501075_0024262 3300049591 Bacteria 4444
140 Ga0501076_0008238 3300049592 Bacteria 7636
141 Ga0501077_0013639 3300049593 Bacteria 5095
142 Ga0501077_0079910 3300049593 Bacteria 2072
143 Ga0501079_0028841 3300049741 Bacteria 4260
144 Ga0501079_0074100 3300049741 Bacteria 2631
145 Ga0501080_0024606 3300049742 Bacteria 5583
146 Ga0501080_0028940 3300049742 Bacteria 5158
147 Ga0501080_0047229 3300049742 Bacteria 4008
148 Ga0501080_0122290 3300049742 Bacteria 2411
149 Ga0501080_0171051 3300049742 Bacteria 2004
150 Ga0501083_0014766 3300049744 Bacteria 5462
151 Ga0501083_0031209 3300049744 Bacteria 3657
152 Ga0501035_0002435 3300049822 Bacteria 18190
153 Ga0501035_0055505 3300049822 Bacteria 3536
154 Ga0501044_0124816 3300049823 Bacteria 2572
155 nmdc:mga03683_1151_c1 3300050489 Bacteria 7781
156 nmdc:mga00v17_32616_c1 3300050491 Bacteria 3080
157 nmdc:mga00v17_53835_c1 3300050491 Bacteria 2454
158 nmdc:mga00v17_71003_c1 3300050491 Bacteria 2158
159 nmdc:mga0yw44_1597_c1 3300050492 Bacteria 9091
160 nmdc:mga0yw44_2297_c1 3300050492 Bacteria 8081
161 nmdc:mga0yw44_26062_c1 3300050492 Bacteria 3335
162 nmdc:mga0yw44_3281_c1 3300050492 Bacteria 7145
163 nmdc:mga0yw44_8580_c1 3300050492 Bacteria 5103
164 nmdc:mga0yw44_98371_c1 3300050492 Bacteria 1860
165 nmdc:mga06z11_2444_c1 3300050494 Bacteria 7086
166 nmdc:mga06z11_3671_c1 3300050494 Bacteria 5961
167 nmdc:mga04h51_3789_c1 3300050495 Bacteria 3709
168 Ga0495601_0032459 3300053077 Bacteria 3251
169 Ga0495619_0008825 3300053085 Bacteria 6375
170 Ga0500641_0026678 3300053096 Bacteria 2244
171 Ga0500556_0001017 3300053104 Bacteria 14670
172 Ga0500593_000014 3300053117 Bacteria 58730
173 Ga0501084_0008213 3300054114 Bacteria 8613
174 Ga0501084_0019762 3300054114 Bacteria 5613
175 Ga0501082_0021382 3300060353 Bacteria 5581
176 Ga0501082_0121368 3300060353 Bacteria 2265
177 2515851297 2515154155 Bacteria 7985436
178 2644089138 2643221615 Bacteria 5487866
179 2644318983 2643221657 Bacteria 5490246
180 2855387251 2855386786 Bacteria 4752232
181 2857482573 2857481737 Bacteria 4761446
182 Ga0307415_100010481
183 JGI24737J22298_10023592
184 Ga0070683_100012360
185 Ga0070689_100140928
186 Ga0070667_100078275
187 Ga0070714_100006464
188 Ga0070681_10225629
189 Ga0070698_100002455
190 Ga0070679_100146038
191 Ga0070684_100004679
192 Ga0070665_100004296
193 Ga0068856_100030983
194 Ga0068860_100000882
195 Ga0075365_10004807
196 Ga0075365_10005082
197 Ga0075365_10013038
198 Ga0075365_10017776
199 Ga0075365_10017874
200 Ga0075365_10026879
201 Ga0075365_10028553
202 Ga0075365_10036698
203 Ga0075368_10001528
204 Ga0075368_10007644
205 Ga0075363_100003533
206 Ga0075363_100004855
207 Ga0075363_100005297
208 Ga0075364_10004142
209 Ga0075364_10019983
210 Ga0075364_10051221
211 Ga0075367_10004312
212 Ga0075370_10018020
213 Ga0105245_10033266
214 Ga0105243_10153876
215 Ga0105238_10119237
216 Ga0105239_10003866
217 Ga0105246_10039592
218 Ga0157372_10003827
219 Ga0157375_10006629
220 Ga0163163_10026709
221 Ga0157377_10079273
222 Ga0157379_10038769
223 Ga0207652_10097385
224 Ga0207687_10012913
225 Ga0207690_10115174
226 Ga0207661_10008501
227 Ga0207661_10051113
228 Ga0207658_10068433
229 Ga0207703_10040174
230 Ga0207708_10032894
231 Ga0207702_10012578
232 Ga0207648_10038123
233 Ga0207674_10063146
234 Ga0207675_100057330
235 Ga0207675_100060458
236 Ga0209813_10003830
237 Ga0209813_10007337
238 Ga0268266_10002654
239 Ga0268264_10001649
240 Ga0307409_100031787
241 Ga0307409_100052238
242 Ga0395905_0031579
243 Ga0439434_0001381
244 Ga0466965_0013089
245 Ga0466961_0044886
246 Ga0466964_0009768
247 Ga0466970_0002953
248 Ga0466957_0011441
249 Ga0466960_0003052
250 Ga0466960_0022856
251 Ga0466967_0017705
252 Ga0466967_0032548
253 Ga0466967_0084884
254 Ga0496100_0018585
255 Ga0496100_0037403
256 Ga0496102_0088068
257 Ga0496104_0049400
258 Ga0496106_0083410
259 Ga0496107_0035008
260 Ga0496108_0010560
261 Ga0496108_0038212
262 Ga0496109_0005951
263 Ga0496109_0074382
264 Ga0496109_0099577
265 Ga0496109_0189786
266 Ga0496110_0003268
267 Ga0496110_0127894
268 Ga0496110_0219285
269 Ga0496111_0148287
270 Ga0496112_0226238
271 Ga0496114_0003343
272 Ga0496114_0068172
273 Ga0496114_0180401
274 Ga0496115_0010588
275 Ga0501031_0003288
276 Ga0501032_0037036
277 Ga0501033_0001321
278 Ga0501033_0038425
279 Ga0501034_0006096
280 Ga0501034_0028742
281 Ga0501034_0127632
282 Ga0501036_0003085
283 Ga0501036_0041882
284 Ga0501036_0080820
285 Ga0501036_0142580
286 Ga0501037_0008083
287 Ga0501037_0008117
288 Ga0501037_0023795
289 Ga0501038_0002800
290 Ga0501038_0013190
291 Ga0501038_0093610
292 Ga0501038_0115138
293 Ga0501039_0004558
294 Ga0501039_0022291
295 Ga0501039_0027492
296 Ga0501040_0002442
297 Ga0501041_0005387
298 Ga0501041_0043426
299 Ga0501042_0004218
300 Ga0501042_0008085
301 Ga0501043_0012603
302 Ga0501046_0004537
303 Ga0501046_0009611
304 Ga0501046_0094306
305 Ga0501047_0022006
306 Ga0501048_0011248
307 Ga0501048_0013087
308 Ga0501067_0000382
309 Ga0501068_0004453
310 Ga0501069_0005381
311 Ga0501070_0011760
312 Ga0501070_0050776
313 Ga0501071_0001717
314 Ga0501071_0032048
315 Ga0501072_0009579
316 Ga0501073_0043065
317 Ga0501074_0002178
318 Ga0501074_0060191
319 Ga0501074_0123276
320 Ga0501075_0024262
321 Ga0501076_0008238
322 Ga0501077_0013639
323 Ga0501077_0079910
324 Ga0501079_0028841
325 Ga0501079_0074100
326 Ga0501080_0024606
327 Ga0501080_0028940
328 Ga0501080_0047229
329 Ga0501080_0122290
330 Ga0501080_0171051
331 Ga0501083_0014766
332 Ga0501083_0031209
333 Ga0501035_0002435
334 Ga0501035_0055505
335 Ga0501044_0124816
336 nmdc:mga03683_1151_c1
337 nmdc:mga00v17_32616_c1
338 nmdc:mga00v17_53835_c1
339 nmdc:mga00v17_71003_c1
340 nmdc:mga0yw44_1597_c1
341 nmdc:mga0yw44_2297_c1
342 nmdc:mga0yw44_26062_c1
343 nmdc:mga0yw44_3281_c1
344 nmdc:mga0yw44_8580_c1
345 nmdc:mga0yw44_98371_c1
346 nmdc:mga06z11_2444_c1
347 nmdc:mga06z11_3671_c1
348 nmdc:mga04h51_3789_c1
349 Ga0495601_0032459
350 Ga0495619_0008825
351 Ga0500641_0026678
352 Ga0500556_0001017
353 Ga0500593_000014
354 Ga0501084_0008213
355 Ga0501084_0019762
356 Ga0501082_0021382
357 Ga0501082_0121368
358 2515851297
359 2644089138
360 2644318983
361 2855387251
362 2857482573

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20154

LNT_N

Apolipoprotein N-acyltransferase N-terminal domain

70

219

0.94

PF00795

CN_hydrolase

Carbon-nitrogen hydrolase

260

517

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
8aq3-assembly1.cif.gz_A in surfo structure of the membrane integral lipoprotein n-acyltransferase lnt from e. coli in complex with pe 0.8435 2 486
8b0k-assembly1.cif.gz_A cryo-em structure of apolipoprotein n-acyltransferase lnt from e. coli (apo form) 0.8353 2 485
7aci-assembly1.cif.gz_A in meso structure of apolipoprotein n-acyltransferase, lnt, from escherichia coli in 9.8 monoacylglycerol 0.83 2 486
5n6l-assembly2.cif.gz_B structure of the membrane integral lipoprotein n-acyltransferase lnt c387a mutant from e. coli 0.8298 2 486
8b0o-assembly1.cif.gz_A cryo-em structure apolipoprotein n-acyltransferase lnt from e.coli in complex with fp3 0.8265 2 486
ID Description Score Start End Superfamily
af_O53493_232_506_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9294 196 465 3.60.110.10
af_O53493_232_506_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9098 196 465 3.60.110.10
af_O53536_219_350_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.837 203 327 3.60.110.10
af_P23930_215_482_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8087 202 462 3.60.110.10
af_P23930_215_482_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.7883 202 462 3.60.110.10
ID Description Score Start End GO Terms
AF-W4TR71-F1-model_v4 deleted 0.9674 3 162
AF-A0A7K2YN88-F1-model_v4 Apolipoprotein N-acyltransferase 0.9631 3 165 GO:0016020
GO:0016410
GO:0042158
AF-A0A0Q9R1Y0-F1-model_v4 Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC 2.3.1.269) 0.963 6 497 GO:0005886
GO:0016410
GO:0042158
AF-A0A0Q9R1Y0-F1-model_v4 Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC 2.3.1.269) 0.9573 6 497 GO:0005886
GO:0016410
GO:0042158
AF-A0A6G3QRK9-F1-model_v4 Apolipoprotein N-acyltransferase 0.9525 3 162 GO:0016020
GO:0016410
GO:0042158

Map