F277576

General Info

Members Datasets Scaffolds Average Seq Length
181 147 168 383

Family's Representative Sequence

Representative Sequence 3300028653|Ga0265323_10000475|Ga0265323_100004753
Length 438
Sequence VPLREHSGFQIQVWGLSLQVSSLRSPVSAFLIMTKPRIYLSSPHMGGDELKLVQETFASNWIAPLGPQVDAFEQEFAARVGSAHAAALSSGTAALHLALRWIGIKPGDEVICSSLTFSASANPITYDGGRPVFVDSDDRSWNMDPALLTEALADRAKKGRLPKAVIVVHLYGQSADIDPIERICAEYGVPMIEDAAEALGAVYWGENRKPETGDLRPEVLRAAKPEPSGFRFQPSGFPPGIAPGSRGVAGIFSFNGNKIITNNKALIDKARFWATQSRDPAPHYQHSEIGFNYRMSNVLAAIGRGQLRVLEQRVDARRANFEYYRKALGDLPGLAFMPEADYGRCTRWLTCLTIDPAVAGVDRERIRLAMVEENIEARPVWKPLHLQPVFKDCPCYGGAVAERLFDRGLCLPSGSNLSTTDLDRVVDVVRNTFGRRET

Samples

Sample ID Description Type Environment
1 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
2 2671180694 Paenibacillus sp. A3 Isolate Unclassified
3 2738543010 Bacillus sp. YR335 Isolate Unclassified
4 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
5 2831426010 Nostoc sp. 106C Isolate Unclassified
6 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
7 2849660919 Nostoc sp. T09 Isolate Unclassified
8 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
9 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
10 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
11 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
12 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
13 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
14 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
15 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
60 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
61 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
80 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
81 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
82 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
85 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
86 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
87 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
90 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
94 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
95 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
96 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
99 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
105 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
114 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
121 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
122 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
123 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
136 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
137 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
141 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
142 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
145 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
146 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
147 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.71
Metatranscriptomes 1.1
Isolates 7.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.66
Nodule 0
Rhizoplane 9.94
Rhizosphere 74.03
Stem 0
Stem Tuber 0
Unclassified 14.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10049686 3300003316 Bacteria 5632
2 Ga0058863_11198105 3300004799 Bacteria 1986
3 Ga0058862_10761916 3300004803 Unclassified 3239
4 Ga0070658_10022757 3300005327 Bacteria 5030
5 Ga0070683_100009527 3300005329 Bacteria 8313
6 Ga0070683_100031882 3300005329 Bacteria 4795
7 Ga0070682_100026683 3300005337 Bacteria 3460
8 Ga0070660_100074693 3300005339 Bacteria 2653
9 Ga0070673_100099039 3300005364 Bacteria 2397
10 Ga0070714_100009335 3300005435 Bacteria 7706
11 Ga0070713_100040322 3300005436 Bacteria 3796
12 Ga0070705_100010173 3300005440 Bacteria 4700
13 Ga0070694_100207964 3300005444 Bacteria 1462
14 Ga0070708_100005879 3300005445 Bacteria 9743
15 Ga0070678_100052192 3300005456 Bacteria 2968
16 Ga0070681_10003432 3300005458 Bacteria 14845
17 Ga0070681_10008023 3300005458 Bacteria 10338
18 Ga0070706_100028072 3300005467 Bacteria 5179
19 Ga0070699_100022181 3300005518 Bacteria 5472
20 Ga0070679_100001001 3300005530 Bacteria 24620
21 Ga0070679_100016647 3300005530 Bacteria 7101
22 Ga0070684_100000348 3300005535 Bacteria 31803
23 Ga0070697_100007166 3300005536 Bacteria 8676
24 Ga0070686_100000028 3300005544 Bacteria 123829
25 Ga0070695_100012242 3300005545 Bacteria 5145
26 Ga0070693_100003719 3300005547 Bacteria 7135
27 Ga0070665_100067732 3300005548 Bacteria 3579
28 Ga0070664_100044624 3300005564 Bacteria 3743
29 Ga0068857_100047644 3300005577 Bacteria 3806
30 Ga0068856_100058604 3300005614 Bacteria 3803
31 Ga0075428_100006304 3300006844 Bacteria 13186
32 Ga0075431_100007250 3300006847 Bacteria 11037
33 Ga0075433_10000172 3300006852 Bacteria 35648
34 Ga0075429_100002380 3300006880 Bacteria 15838
35 Ga0105240_10078778 3300009093 Bacteria 4057
36 Ga0105240_10518213 3300009093 Bacteria 1324
37 Ga0111539_10026324 3300009094 Bacteria 7112
38 Ga0111539_10039090 3300009094 Bacteria 5721
39 Ga0111539_10061706 3300009094 Bacteria 4440
40 Ga0105245_10021105 3300009098 Bacteria 5713
41 Ga0105245_10141122 3300009098 Bacteria 2269
42 Ga0114129_10190905 3300009147 Bacteria 2782
43 Ga0105243_10251397 3300009148 Bacteria 1578
44 Ga0105241_10032182 3300009174 Bacteria 3930
45 Ga0105248_10090431 3300009177 Bacteria 3447
46 Ga0105237_10250734 3300009545 Bacteria 1772
47 Ga0157370_10021908 3300013104 Bacteria 6364
48 Ga0157370_10071938 3300013104 Bacteria 3263
49 Ga0157369_10272100 3300013105 Bacteria 1765
50 Ga0157378_10156832 3300013297 Bacteria 2126
51 Ga0163162_10079418 3300013306 Bacteria 3347
52 Ga0157372_10046373 3300013307 Bacteria 4824
53 Ga0157380_10216462 3300014326 Bacteria 1711
54 Ga0157376_10069068 3300014969 Bacteria 2994
55 Ga0213876_10017356 3300021384 Bacteria 3800
56 Ga0209130_1003717 3300025284 Bacteria 6259
57 Ga0209025_1034429 3300025294 Bacteria 2312
58 Ga0207684_10051708 3300025910 Bacteria 3486
59 Ga0207654_10023438 3300025911 Bacteria 3307
60 Ga0207707_10002800 3300025912 Bacteria 15552
61 Ga0207707_10006786 3300025912 Bacteria 9990
62 Ga0207695_10068884 3300025913 Bacteria 3624
63 Ga0207695_10069112 3300025913 Bacteria 3616
64 Ga0207695_10340441 3300025913 Bacteria 1388
65 Ga0207660_10016331 3300025917 Bacteria 4914
66 Ga0207657_10045793 3300025919 Bacteria 3835
67 Ga0207652_10003433 3300025921 Bacteria 13074
68 Ga0207652_10004948 3300025921 Bacteria 10787
69 Ga0207687_10004358 3300025927 Bacteria 9441
70 Ga0207687_10031646 3300025927 Bacteria 3577
71 Ga0207664_10022760 3300025929 Bacteria 4685
72 Ga0207709_10033059 3300025935 Bacteria 3034
73 Ga0207711_10109703 3300025941 Bacteria 2453
74 Ga0207661_10006006 3300025944 Bacteria 8575
75 Ga0207679_10014166 3300025945 Bacteria 5236
76 Ga0207651_10115943 3300025960 Bacteria 2021
77 Ga0207677_10005712 3300026023 Bacteria 6766
78 Ga0207702_10016787 3300026078 Bacteria 6059
79 Ga0207674_10058354 3300026116 Bacteria 3910
80 Ga0265319_1008892 3300028563 Bacteria 4346
81 Ga0265323_10000475 3300028653 Bacteria 22678
82 Ga0265322_10013632 3300028654 Bacteria 2352
83 Ga0265338_10001525 3300028800 Bacteria 37363
84 Ga0265338_10003316 3300028800 Bacteria 22784
85 Ga0265320_10000014 3300031240 Bacteria 208129
86 Ga0265320_10001887 3300031240 Bacteria 14795
87 Ga0265320_10004256 3300031240 Bacteria 9403
88 Ga0265320_10034365 3300031240 Bacteria 2580
89 Ga0265327_10000023 3300031251 Bacteria 382703
90 Ga0265316_10000406 3300031344 Bacteria 49213
91 Ga0307408_100004024 3300031548 Bacteria 10027
92 Ga0307408_100030025 3300031548 Bacteria 3772
93 Ga0265313_10041623 3300031595 Bacteria 2262
94 Ga0265314_10026231 3300031711 Bacteria 4380
95 Ga0307405_10095924 3300031731 Bacteria 1976
96 Ga0307406_10000759 3300031901 Bacteria 18165
97 Ga0307416_100003825 3300032002 Bacteria 8947
98 Ga0373937_0037222 3300036401 Bacteria 4434
99 Ga0400484_31559 3300038725 Unclassified 1921
100 Ga0400490_06459 3300038726 Bacteria 1833
101 Ga0400486_25267 3300038742 Bacteria 20708
102 Ga0400483_049946 3300039062 Bacteria 8433
103 Ga0400483_101843 3300039062 Bacteria 8547
104 Ga0400483_227040 3300039062 Bacteria 12364
105 Ga0436365_1424589 3300039437 Bacteria 4833
106 Ga0451577_0000036 3300042876 Bacteria 367683
107 Ga0451577_0005048 3300042876 Bacteria 13635
108 Ga0453683_0116708 3300044673 Bacteria 1679
109 Ga0466961_0004423 3300044693 Bacteria 8796
110 Ga0453684_0000244 3300044712 Bacteria 233555
111 Ga0453684_0001959 3300044712 Bacteria 53067
112 Ga0453684_0013937 3300044712 Bacteria 12963
113 Ga0453684_0056957 3300044712 Bacteria 5065
114 Ga0453684_0516280 3300044712 Bacteria 1321
115 Ga0451576_0000981 3300045051 Bacteria 52879
116 Ga0451576_0003984 3300045051 Bacteria 19660
117 Ga0495630_0047908 3300046517 Bacteria 3198
118 Ga0495643_0000024 3300046522 Bacteria 282193
119 Ga0495668_0002273 3300046616 Bacteria 16147
120 Ga0496100_0178242 3300048903 Bacteria 1535
121 Ga0496101_0106950 3300048904 Bacteria 2101
122 Ga0496102_0010083 3300048905 Bacteria 8129
123 Ga0496102_0361049 3300048905 Bacteria 1368
124 Ga0496103_0033474 3300048906 Bacteria 3140
125 Ga0496104_0015022 3300048907 Bacteria 7005
126 Ga0496105_0016790 3300048908 Bacteria 5851
127 Ga0496106_0057399 3300048909 Bacteria 2944
128 Ga0496108_0020363 3300048911 Bacteria 5452
129 Ga0496109_0051595 3300048912 Bacteria 3746
130 Ga0496110_0010300 3300048913 Bacteria 7597
131 Ga0496110_0046456 3300048913 Bacteria 3799
132 Ga0496111_0023031 3300048914 Bacteria 4368
133 Ga0496112_0236148 3300048915 Bacteria 1782
134 Ga0496114_0001058 3300048917 Bacteria 20693
135 Ga0496114_0007728 3300048917 Bacteria 8506
136 Ga0496114_0252990 3300048917 Bacteria 1550
137 Ga0496115_0064836 3300048918 Bacteria 2950
138 Ga0496122_0003975 3300048925 Bacteria 18868
139 Ga0496123_0117229 3300048926 Bacteria 1506
140 Ga0496124_0000867 3300048927 Bacteria 49429
141 Ga0496125_0000928 3300048928 Bacteria 45993
142 Ga0501031_0049713 3300049568 Bacteria 2733
143 Ga0501032_0000688 3300049569 Bacteria 27493
144 Ga0501033_0001308 3300049570 Bacteria 22132
145 Ga0501036_0007441 3300049572 Bacteria 8921
146 Ga0501037_0006377 3300049573 Bacteria 8628
147 Ga0501037_0062259 3300049573 Bacteria 2720
148 Ga0501038_0025483 3300049574 Bacteria 5271
149 Ga0501043_0001443 3300049579 Bacteria 20783
150 Ga0501046_0032223 3300049580 Bacteria 4244
151 Ga0501047_0001287 3300049581 Bacteria 24762
152 Ga0501047_0168613 3300049581 Bacteria 2059
153 Ga0501048_0022423 3300049582 Bacteria 4619
154 Ga0501070_0104123 3300049586 Bacteria 2347
155 Ga0501217_019635 3300049661 Bacteria 1580
156 Ga0501227_007584 3300049665 Bacteria 2325
157 Ga0501257_010285 3300049686 Bacteria 2122
158 Ga0501083_0003007 3300049744 Bacteria 11708
159 Ga0501083_0006061 3300049744 Bacteria 8565
160 Ga0501035_0001038 3300049822 Bacteria 29087
161 Ga0501044_0002218 3300049823 Bacteria 22271
162 nmdc:mga0qj67_32830_c1 3300050509 Bacteria 4049
163 nmdc:mga0qj67_50565_c1 3300050509 Bacteria 3287
164 nmdc:mga06r32_161025_c1 3300050510 Bacteria 2227
165 nmdc:mga08y16_205939_c1 3300050511 Bacteria 2038
166 nmdc:mga08x19_1021_c1 3300050514 Bacteria 17450
167 nmdc:mga0a205_2_c1 3300050515 Bacteria 167549
168 Ga0500622_0009027 3300053156 Bacteria 5540

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049573 Ga0501037_0006377 Ga0501037_0006377_7575_8597 311
2 3300009147 Ga0114129_10190905 Ga0114129_101909052 325
3 iso_pu_bacteria 2738543010 2739230880 327
4 3300031548 Ga0307408_100004024 Ga0307408_1000040249 328
5 3300031901 Ga0307406_10000759 Ga0307406_100007599 328
6 3300048915 Ga0496112_0236148 Ga0496112_0236148_561_1634 328
7 3300028654 Ga0265322_10013632 Ga0265322_100136322 330
8 3300014326 Ga0157380_10216462 Ga0157380_102164622 333
9 3300004803 Ga0058862_10761916 Ga0058862_107619162 335
10 3300048917 Ga0496114_0252990 Ga0496114_0252990_210_1322 335
11 3300049665 Ga0501227_007584 Ga0501227_007584_727_1863 335
12 3300044712 Ga0453684_0013937 Ga0453684_0013937_3995_5092 336
13 3300053156 Ga0500622_0009027 Ga0500622_0009027_3862_4959 336
14 3300006844 Ga0075428_100006304 Ga0075428_1000063049 338
15 3300048925 Ga0496122_0003975 Ga0496122_0003975_8212_9405 338
16 3300005544 Ga0070686_100000028 Ga0070686_10000002866 339
17 3300009094 Ga0111539_10039090 Ga0111539_100390902 339
18 3300021384 Ga0213876_10017356 Ga0213876_100173563 339
19 3300036401 Ga0373937_0037222 Ga0373937_0037222_2926_4062 339
20 3300039437 Ga0436365_1424589 Ga0436365_1424589_2172_3278 339
21 3300046522 Ga0495643_0000024 Ga0495643_0000024_125337_126488 339
22 3300049581 Ga0501047_0168613 Ga0501047_0168613_14_1177 339
23 3300050509 nmdc:mga0qj67_50565_c1 nmdc:mga0qj67_50565_c1_98_1237 339
24 3300050510 nmdc:mga06r32_161025_c1 nmdc:mga06r32_161025_c1_516_1655 339
25 3300050511 nmdc:mga08y16_205939_c1 nmdc:mga08y16_205939_c1_809_1945 339
26 3300013297 Ga0157378_10156832 Ga0157378_101568322 340
27 3300005329 Ga0070683_100009527 Ga0070683_1000095277 341
28 3300005337 Ga0070682_100026683 Ga0070682_1000266833 341
29 3300005364 Ga0070673_100099039 Ga0070673_1000990392 341
30 3300005456 Ga0070678_100052192 Ga0070678_1000521922 341
31 3300005458 Ga0070681_10008023 Ga0070681_100080234 341
32 3300005530 Ga0070679_100016647 Ga0070679_1000166472 341
33 3300005535 Ga0070684_100000348 Ga0070684_1000003488 341
34 3300005547 Ga0070693_100003719 Ga0070693_1000037195 341
35 3300005564 Ga0070664_100044624 Ga0070664_1000446244 341
36 3300005614 Ga0068856_100058604 Ga0068856_1000586043 341
37 3300009098 Ga0105245_10021105 Ga0105245_100211051 341
38 3300009098 Ga0105245_10141122 Ga0105245_101411223 341
39 3300009148 Ga0105243_10251397 Ga0105243_102513971 341
40 3300009174 Ga0105241_10032182 Ga0105241_100321824 341
41 3300013306 Ga0163162_10079418 Ga0163162_100794183 341
42 3300014969 Ga0157376_10069068 Ga0157376_100690682 341
43 3300025912 Ga0207707_10002800 Ga0207707_1000280011 341
44 3300025917 Ga0207660_10016331 Ga0207660_100163313 341
45 3300025921 Ga0207652_10003433 Ga0207652_100034334 341
46 3300025927 Ga0207687_10004358 Ga0207687_100043585 341
47 3300025927 Ga0207687_10031646 Ga0207687_100316462 341
48 3300025935 Ga0207709_10033059 Ga0207709_100330592 341
49 3300025944 Ga0207661_10006006 Ga0207661_100060067 341
50 3300025945 Ga0207679_10014166 Ga0207679_100141663 341
51 3300025960 Ga0207651_10115943 Ga0207651_101159433 341
52 3300026023 Ga0207677_10005712 Ga0207677_100057126 341
53 3300026078 Ga0207702_10016787 Ga0207702_100167874 341
54 3300028653 Ga0265323_10000475 Ga0265323_100004753 341
55 3300031344 Ga0265316_10000406 Ga0265316_1000040641 341
56 3300046616 Ga0495668_0002273 Ga0495668_0002273_9638_10780 341
57 3300048903 Ga0496100_0178242 Ga0496100_0178242_102_1214 341
58 3300048904 Ga0496101_0106950 Ga0496101_0106950_917_2029 341
59 3300048905 Ga0496102_0010083 Ga0496102_0010083_974_2086 341
60 3300048905 Ga0496102_0361049 Ga0496102_0361049_185_1297 341
61 3300048906 Ga0496103_0033474 Ga0496103_0033474_1129_2241 341
62 3300048907 Ga0496104_0015022 Ga0496104_0015022_1530_2642 341
63 3300048908 Ga0496105_0016790 Ga0496105_0016790_4358_5470 341
64 3300048909 Ga0496106_0057399 Ga0496106_0057399_1558_2670 341
65 3300048911 Ga0496108_0020363 Ga0496108_0020363_97_1209 341
66 3300048912 Ga0496109_0051595 Ga0496109_0051595_238_1350 341
67 3300048913 Ga0496110_0010300 Ga0496110_0010300_6329_7441 341
68 3300048913 Ga0496110_0046456 Ga0496110_0046456_887_1999 341
69 3300048914 Ga0496111_0023031 Ga0496111_0023031_104_1216 341
70 3300048917 Ga0496114_0001058 Ga0496114_0001058_2266_3378 341
71 3300048917 Ga0496114_0007728 Ga0496114_0007728_4584_5696 341
72 3300048918 Ga0496115_0064836 Ga0496115_0064836_1220_2332 341
73 3300044712 Ga0453684_0516280 Ga0453684_0516280_138_1271 342
74 3300005445 Ga0070708_100005879 Ga0070708_1000058796 343
75 3300004799 Ga0058863_11198105 Ga0058863_111981051 346
76 3300005436 Ga0070713_100040322 Ga0070713_1000403223 346
77 3300005458 Ga0070681_10003432 Ga0070681_100034327 346
78 3300005530 Ga0070679_100001001 Ga0070679_1000010018 346
79 3300009177 Ga0105248_10090431 Ga0105248_100904313 346
80 3300025912 Ga0207707_10006786 Ga0207707_100067863 346
81 3300025921 Ga0207652_10004948 Ga0207652_100049485 346
82 3300025941 Ga0207711_10109703 Ga0207711_101097032 346
83 3300031240 Ga0265320_10000014 Ga0265320_1000001473 346
84 iso_pu_bacteria 2617270889 2617918802 346
85 iso_pu_bacteria 2831426010 2831429204 346
86 iso_pu_bacteria 2848694841 2848699208 346
87 iso_pu_bacteria 2849660919 2849666735 346
88 iso_pu_bacteria 2886627955 2886633317 346
89 iso_pu_bacteria 2913939268 2913940610 346
90 iso_pu_bacteria 642555144 642601571 346
91 3300009094 Ga0111539_10026324 Ga0111539_100263246 347
92 3300028563 Ga0265319_1008892 Ga0265319_10088922 347
93 3300031240 Ga0265320_10004256 Ga0265320_100042568 347
94 3300031240 Ga0265320_10034365 Ga0265320_100343653 347
95 3300031251 Ga0265327_10000023 Ga0265327_10000023267 347
96 3300038726 Ga0400490_06459 Ga0400490_06459_384_1544 347
97 3300039062 Ga0400483_049946 Ga0400483_049946_1065_2225 347
98 3300042876 Ga0451577_0005048 Ga0451577_0005048_1468_2598 347
99 3300044712 Ga0453684_0056957 Ga0453684_0056957_2395_3525 347
100 3300049586 Ga0501070_0104123 Ga0501070_0104123_1204_2337 347
101 3300049744 Ga0501083_0003007 Ga0501083_0003007_7535_8668 347
102 3300049744 Ga0501083_0006061 Ga0501083_0006061_3880_5013 347
103 3300005327 Ga0070658_10022757 Ga0070658_100227572 348
104 3300009093 Ga0105240_10518213 Ga0105240_105182131 348
105 3300013105 Ga0157369_10272100 Ga0157369_102721003 348
106 3300028800 Ga0265338_10001525 Ga0265338_1000152529 348
107 3300028800 Ga0265338_10003316 Ga0265338_1000331615 348
108 3300031240 Ga0265320_10001887 Ga0265320_100018874 348
109 3300031595 Ga0265313_10041623 Ga0265313_100416232 348
110 3300039062 Ga0400483_101843 Ga0400483_101843_2209_3366 348
111 3300039062 Ga0400483_227040 Ga0400483_227040_7312_8469 348
112 3300045051 Ga0451576_0003984 Ga0451576_0003984_17478_18665 348
113 3300049568 Ga0501031_0049713 Ga0501031_0049713_959_2212 348
114 3300049569 Ga0501032_0000688 Ga0501032_0000688_6751_8004 348
115 3300049570 Ga0501033_0001308 Ga0501033_0001308_2828_4081 348
116 3300049572 Ga0501036_0007441 Ga0501036_0007441_4856_6109 348
117 3300049573 Ga0501037_0062259 Ga0501037_0062259_1397_2650 348
118 3300049574 Ga0501038_0025483 Ga0501038_0025483_2040_3293 348
119 3300049579 Ga0501043_0001443 Ga0501043_0001443_16740_17993 348
120 3300049580 Ga0501046_0032223 Ga0501046_0032223_407_1660 348
121 3300049581 Ga0501047_0001287 Ga0501047_0001287_18577_19830 348
122 3300049582 Ga0501048_0022423 Ga0501048_0022423_1247_2500 348
123 3300049822 Ga0501035_0001038 Ga0501035_0001038_19490_20743 348
124 3300049823 Ga0501044_0002218 Ga0501044_0002218_17009_18262 348
125 iso_pu_bacteria 2671180694 2673820108 348
126 iso_pu_bacteria 2857465823 2857469600 348
127 iso_pu_bacteria 2925326138 2925334314 348
128 3300005444 Ga0070694_100207964 Ga0070694_1002079642 349
129 3300006847 Ga0075431_100007250 Ga0075431_1000072503 349
130 3300006852 Ga0075433_10000172 Ga0075433_100001726 349
131 3300006880 Ga0075429_100002380 Ga0075429_1000023803 349
132 3300009094 Ga0111539_10061706 Ga0111539_100617061 349
133 3300031548 Ga0307408_100030025 Ga0307408_1000300253 349
134 3300031731 Ga0307405_10095924 Ga0307405_100959241 349
135 3300032002 Ga0307416_100003825 Ga0307416_1000038258 349
136 3300042876 Ga0451577_0000036 Ga0451577_0000036_277979_279118 349
137 3300044673 Ga0453683_0116708 Ga0453683_0116708_226_1365 349
138 3300044712 Ga0453684_0000244 Ga0453684_0000244_66056_67195 349
139 3300044712 Ga0453684_0001959 Ga0453684_0001959_33934_35076 349
140 3300045051 Ga0451576_0000981 Ga0451576_0000981_25931_27070 349
141 3300049686 Ga0501257_010285 Ga0501257_010285_672_1820 349
142 3300050509 nmdc:mga0qj67_32830_c1 nmdc:mga0qj67_32830_c1_248_1396 349
143 3300005329 Ga0070683_100031882 Ga0070683_1000318824 350
144 3300005339 Ga0070660_100074693 Ga0070660_1000746932 350
145 3300005435 Ga0070714_100009335 Ga0070714_1000093355 350
146 3300005440 Ga0070705_100010173 Ga0070705_1000101733 350
147 3300005467 Ga0070706_100028072 Ga0070706_1000280721 350
148 3300005518 Ga0070699_100022181 Ga0070699_1000221813 350
149 3300005536 Ga0070697_100007166 Ga0070697_1000071664 350
150 3300005545 Ga0070695_100012242 Ga0070695_1000122424 350
151 3300005548 Ga0070665_100067732 Ga0070665_1000677322 350
152 3300005577 Ga0068857_100047644 Ga0068857_1000476444 350
153 3300009093 Ga0105240_10078778 Ga0105240_100787784 350
154 3300009545 Ga0105237_10250734 Ga0105237_102507342 350
155 3300013104 Ga0157370_10021908 Ga0157370_100219083 350
156 3300013104 Ga0157370_10071938 Ga0157370_100719382 350
157 3300013307 Ga0157372_10046373 Ga0157372_100463734 350
158 3300025284 Ga0209130_1003717 Ga0209130_10037176 350
159 3300025294 Ga0209025_1034429 Ga0209025_10344293 350
160 3300025910 Ga0207684_10051708 Ga0207684_100517083 350
161 3300025911 Ga0207654_10023438 Ga0207654_100234382 350
162 3300025913 Ga0207695_10068884 Ga0207695_100688844 350
163 3300025913 Ga0207695_10069112 Ga0207695_100691122 350
164 3300025913 Ga0207695_10340441 Ga0207695_103404411 350
165 3300025919 Ga0207657_10045793 Ga0207657_100457932 350
166 3300025929 Ga0207664_10022760 Ga0207664_100227602 350
167 3300026116 Ga0207674_10058354 Ga0207674_100583543 350
168 3300031711 Ga0265314_10026231 Ga0265314_100262313 350
169 3300038725 Ga0400484_31559 Ga0400484_31559_459_1625 350
170 3300038742 Ga0400486_25267 Ga0400486_25267_4012_5217 350
171 3300044693 Ga0466961_0004423 Ga0466961_0004423_7389_8585 350
172 3300046517 Ga0495630_0047908 Ga0495630_0047908_1889_3091 350
173 3300048926 Ga0496123_0117229 Ga0496123_0117229_112_1326 350
174 3300048927 Ga0496124_0000867 Ga0496124_0000867_1173_2387 350
175 3300048928 Ga0496125_0000928 Ga0496125_0000928_27215_28429 350
176 3300049661 Ga0501217_019635 Ga0501217_019635_154_1356 350
177 3300050514 nmdc:mga08x19_1021_c1 nmdc:mga08x19_1021_c1_15722_16891 350
178 3300050515 nmdc:mga0a205_2_c1 nmdc:mga0a205_2_c1_67200_68378 350
179 iso_pu_bacteria 2791355222 2793186196 350
180 iso_pu_bacteria 2980182181 2980182477 350
181 3300003316 rootH1_10049686 rootH1_100496866 352

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

43

430

0.95

PF00155

Aminotran_1_2

Aminotransferase class I and II

59

199

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ztc-assembly1.cif.gz_A-2 pgle aminotransferase in complex with external aldimine, mutant k184a 0.9131 5 347
1o69-assembly1.cif.gz_A crystal structure of a plp-dependent enzyme 0.8969 14 347
3dr4-assembly1.cif.gz_A gdp-perosamine synthase k186a mutant from caulobacter crescentus with bound sugar ligand 0.8954 7 345
3bn1-assembly2.cif.gz_C crystal structure of gdp-perosamine synthase 0.8933 5 345
4ztc-assembly1.cif.gz_A-2 pgle aminotransferase in complex with external aldimine, mutant k184a 0.888 5 347
ID Description Score Start End Superfamily
3bcxB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.884 229 348 3.90.1150.10
2po3B02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8802 211 347 3.90.1150.10
af_Q58466_257_386_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8778 230 348 3.90.1150.10
1o62B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.8739 14 224 3.40.640.10
3bn1A02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.8729 229 345 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A559RD97-F1-model_v4 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.9611 1 346 GO:0000271
GO:0008483
GO:0030170
AF-A0A2N8HDF8-F1-model_v4 Pyridoxal phosphate-dependent aminotransferase 0.9596 2 345 GO:0000271
GO:0008483
GO:0030170
AF-A0A6M0QCJ6-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9527 4 352 GO:0000271
GO:0008483
GO:0016020
GO:0030170
AF-A0A259PEV1-F1-model_v4 Aminotransferase 0.9525 2 146 GO:0000271
GO:0008483
GO:0030170
AF-A0A2T2VI59-F1-model_v4 Pyridoxal phosphate-dependent aminotransferase 0.9523 3 135 GO:0000271
GO:0008483
GO:0030170

Feature Viewer

pLDDT pTM Quality
90.08 0.89 High
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Predicted Structure (AlphaFold2)

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